Query 015784
Match_columns 400
No_of_seqs 131 out of 1332
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 09:32:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015784.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015784hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK15493 5-methylthioadenosine 100.0 4.5E-52 9.7E-57 389.6 39.2 361 20-400 2-366 (435)
2 PRK06687 chlorohydrolase; Vali 100.0 9.8E-52 2.1E-56 387.6 38.3 361 21-400 2-366 (419)
3 PRK09045 N-ethylammeline chlor 100.0 6.9E-49 1.5E-53 370.3 39.7 369 14-400 2-372 (443)
4 TIGR03314 Se_ssnA putative sel 100.0 9.4E-49 2E-53 367.8 37.2 358 21-400 1-371 (441)
5 PRK07228 N-ethylammeline chlor 100.0 2.8E-48 6E-53 367.3 39.2 367 19-400 1-369 (445)
6 PRK07203 putative chlorohydrol 100.0 2.9E-48 6.3E-53 366.0 38.4 358 21-400 2-372 (442)
7 cd01303 GDEase Guanine deamina 100.0 3.4E-48 7.5E-53 363.1 37.2 364 28-400 14-383 (429)
8 PRK12393 amidohydrolase; Provi 100.0 3.5E-47 7.5E-52 358.9 39.7 366 19-400 2-386 (457)
9 PRK09228 guanine deaminase; Pr 100.0 2.5E-47 5.4E-52 357.0 37.2 364 20-400 3-380 (433)
10 PRK06038 N-ethylammeline chlor 100.0 7.5E-47 1.6E-51 354.5 39.5 356 19-400 2-358 (430)
11 PRK08203 hydroxydechloroatrazi 100.0 1E-46 2.3E-51 356.6 38.9 365 21-400 4-382 (451)
12 PRK06380 metal-dependent hydro 100.0 1.2E-46 2.5E-51 353.4 38.7 352 20-400 2-355 (418)
13 PRK08418 chlorohydrolase; Prov 100.0 2.1E-46 4.5E-51 347.8 36.8 353 21-400 2-369 (408)
14 PRK08204 hypothetical protein; 100.0 3.2E-46 6.9E-51 353.9 38.0 362 19-400 2-374 (449)
15 TIGR02967 guan_deamin guanine 100.0 4.7E-46 1E-50 347.7 37.6 347 37-400 3-355 (401)
16 PRK08393 N-ethylammeline chlor 100.0 6.5E-46 1.4E-50 347.9 38.5 355 20-400 2-357 (424)
17 cd01298 ATZ_TRZ_like TRZ/ATZ f 100.0 2.4E-45 5.2E-50 345.8 38.6 362 21-400 1-363 (411)
18 cd01312 Met_dep_hydrolase_D Me 100.0 5.3E-45 1.1E-49 335.0 34.4 329 48-400 1-346 (381)
19 COG0402 SsnA Cytosine deaminas 100.0 7.2E-45 1.6E-49 340.2 33.8 361 19-400 2-367 (421)
20 cd01313 Met_dep_hydrolase_E Me 100.0 9.4E-45 2E-49 338.8 33.1 345 36-400 6-377 (418)
21 PRK06151 N-ethylammeline chlor 100.0 3.2E-44 6.9E-49 341.5 37.3 360 20-400 2-395 (488)
22 PRK09229 N-formimino-L-glutama 100.0 9E-44 2E-48 336.2 30.7 356 20-400 4-387 (456)
23 TIGR02022 hutF formiminoglutam 100.0 3.2E-43 6.8E-48 331.4 32.7 356 21-400 4-387 (455)
24 KOG3968 Atrazine chlorohydrola 100.0 3.7E-43 8E-48 305.0 24.3 358 34-400 21-390 (439)
25 PRK07213 chlorohydrolase; Prov 100.0 1.4E-41 2.9E-46 313.3 33.9 329 21-400 2-337 (375)
26 PRK09356 imidazolonepropionase 100.0 1.3E-37 2.8E-42 291.7 30.9 345 18-400 2-372 (406)
27 cd01293 Bact_CD Bacterial cyto 100.0 1.4E-37 3E-42 291.8 28.2 338 22-400 1-368 (398)
28 PRK09230 cytosine deaminase; P 100.0 3.8E-37 8.1E-42 287.2 30.3 338 19-400 4-374 (426)
29 PRK14085 imidazolonepropionase 100.0 3.8E-37 8.2E-42 285.0 28.6 340 19-400 1-355 (382)
30 TIGR01224 hutI imidazoloneprop 100.0 1.4E-36 3E-41 282.1 28.5 322 39-400 2-346 (377)
31 PRK07572 cytosine deaminase; V 100.0 8.8E-35 1.9E-39 272.6 30.4 337 19-400 2-370 (426)
32 COG1574 Predicted metal-depend 100.0 7.9E-35 1.7E-39 271.5 27.2 355 17-400 3-499 (535)
33 cd01296 Imidazolone-5PH Imidaz 100.0 1.6E-34 3.4E-39 267.9 27.0 321 43-400 1-342 (371)
34 cd01314 D-HYD D-hydantoinases 100.0 6.6E-34 1.4E-38 269.7 23.4 326 21-400 1-388 (447)
35 PLN02942 dihydropyrimidinase 100.0 1.2E-32 2.7E-37 261.5 29.0 330 17-400 3-394 (486)
36 PRK05985 cytosine deaminase; P 100.0 3.5E-32 7.6E-37 253.1 27.9 334 19-400 2-357 (391)
37 TIGR02033 D-hydantoinase D-hyd 100.0 2.3E-32 5E-37 260.1 25.8 326 21-400 1-390 (454)
38 COG1228 HutI Imidazolonepropio 100.0 5.7E-33 1.2E-37 253.7 20.0 337 17-400 8-368 (406)
39 PRK07583 cytosine deaminase-li 100.0 7.6E-31 1.6E-35 246.8 32.0 347 14-400 6-391 (438)
40 PRK12394 putative metallo-depe 100.0 8.9E-31 1.9E-35 242.1 28.4 311 19-400 3-333 (379)
41 PRK08323 phenylhydantoinase; V 100.0 1.6E-31 3.4E-36 254.4 23.3 323 20-400 2-388 (459)
42 cd01299 Met_dep_hydrolase_A Me 100.0 3.5E-31 7.6E-36 242.9 24.2 279 69-400 2-326 (342)
43 cd01300 YtcJ_like YtcJ_like me 100.0 7.6E-30 1.6E-34 243.9 28.2 171 218-400 290-475 (479)
44 cd01305 archeal_chlorohydrolas 100.0 1.1E-30 2.4E-35 229.8 19.7 256 77-384 1-263 (263)
45 TIGR01975 isoAsp_dipep isoaspa 100.0 8.5E-30 1.8E-34 232.9 24.0 310 21-400 2-355 (389)
46 PRK06846 putative deaminase; V 100.0 9.8E-29 2.1E-33 230.9 28.1 341 20-400 5-373 (410)
47 PRK10657 isoaspartyl dipeptida 100.0 8.8E-29 1.9E-33 230.6 27.1 312 20-400 2-354 (388)
48 PRK15446 phosphonate metabolis 100.0 7.2E-28 1.6E-32 221.6 26.5 303 19-400 2-355 (383)
49 PRK09357 pyrC dihydroorotase; 100.0 8.1E-28 1.8E-32 226.3 27.2 317 20-400 2-374 (423)
50 cd01297 D-aminoacylase D-amino 100.0 2.6E-27 5.6E-32 221.5 27.0 313 20-400 1-366 (415)
51 TIGR01792 urease_alph urease, 100.0 2.3E-27 5E-32 221.5 25.9 307 17-400 64-430 (567)
52 PRK13309 ureC urease subunit a 100.0 2.9E-27 6.2E-32 221.1 26.4 322 6-400 53-435 (572)
53 PRK13207 ureC urease subunit a 100.0 2.4E-26 5.2E-31 214.4 28.9 314 6-400 53-431 (568)
54 PRK13206 ureC urease subunit a 100.0 5E-26 1.1E-30 211.7 26.9 318 6-400 57-436 (573)
55 PRK13404 dihydropyrimidinase; 100.0 8.3E-27 1.8E-31 220.7 22.2 327 19-400 4-397 (477)
56 TIGR02318 phosphono_phnM phosp 100.0 6.1E-26 1.3E-30 208.1 27.1 303 22-400 1-351 (376)
57 PRK09237 dihydroorotase; Provi 100.0 1.1E-25 2.3E-30 208.9 28.1 307 21-400 1-327 (380)
58 cd01315 L-HYD_ALN L-Hydantoina 100.0 9.8E-26 2.1E-30 213.9 28.3 320 20-400 1-385 (447)
59 PLN02303 urease 100.0 5.9E-26 1.3E-30 216.9 26.5 318 5-400 319-700 (837)
60 cd01309 Met_dep_hydrolase_C Me 100.0 2.2E-27 4.8E-32 217.3 16.0 306 47-400 1-332 (359)
61 TIGR03178 allantoinase allanto 99.9 2.8E-27 6E-32 223.4 16.7 319 20-400 1-381 (443)
62 PLN02795 allantoinase 99.9 3.7E-26 8E-31 217.1 23.5 328 19-400 44-439 (505)
63 PRK13985 ureB urease subunit b 99.9 4.2E-25 9.1E-30 203.7 27.5 320 5-400 51-431 (568)
64 PRK07627 dihydroorotase; Provi 99.9 3.1E-25 6.7E-30 206.8 26.9 317 20-400 2-375 (425)
65 PRK09236 dihydroorotase; Revie 99.9 5.1E-25 1.1E-29 207.7 27.8 105 280-400 262-379 (444)
66 PRK06189 allantoinase; Provisi 99.9 4.5E-25 9.7E-30 208.5 27.4 321 19-400 3-384 (451)
67 PRK07575 dihydroorotase; Provi 99.9 8.9E-26 1.9E-30 212.1 22.3 314 19-400 3-373 (438)
68 TIGR01178 ade adenine deaminas 99.9 4.7E-25 1E-29 209.9 27.3 298 20-400 1-307 (552)
69 cd00375 Urease_alpha Urease al 99.9 7.1E-25 1.5E-29 203.0 25.3 316 6-400 51-431 (567)
70 cd00854 NagA N-acetylglucosami 99.9 9.7E-26 2.1E-30 207.6 19.1 318 21-400 1-356 (374)
71 KOG2584 Dihydroorotase and rel 99.9 1.4E-26 3.1E-31 201.2 12.3 342 18-400 13-406 (522)
72 PRK13308 ureC urease subunit a 99.9 1.7E-24 3.8E-29 200.5 26.8 311 5-400 52-432 (569)
73 COG1820 NagA N-acetylglucosami 99.9 1.7E-25 3.6E-30 196.5 18.6 321 21-400 2-357 (380)
74 PRK07369 dihydroorotase; Provi 99.9 7.3E-24 1.6E-28 196.9 28.1 320 18-400 1-377 (418)
75 PRK02382 dihydroorotase; Provi 99.9 1.5E-23 3.2E-28 197.8 29.5 317 19-400 2-372 (443)
76 TIGR00221 nagA N-acetylglucosa 99.9 4.3E-24 9.2E-29 194.9 24.4 325 19-400 3-361 (380)
77 cd01307 Met_dep_hydrolase_B Me 99.9 6.2E-24 1.3E-28 193.7 25.6 288 42-400 1-308 (338)
78 cd01308 Isoaspartyl-dipeptidas 99.9 2.6E-23 5.7E-28 193.7 29.7 311 21-400 2-353 (387)
79 COG3964 Predicted amidohydrola 99.9 7.9E-24 1.7E-28 176.2 21.0 304 18-400 3-331 (386)
80 COG0044 PyrC Dihydroorotase an 99.9 3.8E-23 8.2E-28 190.2 26.6 314 20-400 2-373 (430)
81 COG1001 AdeC Adenine deaminase 99.9 1.3E-23 2.9E-28 192.3 22.3 300 16-400 21-334 (584)
82 PRK11170 nagA N-acetylglucosam 99.9 2E-23 4.4E-28 191.1 22.7 326 21-400 2-358 (382)
83 PRK08044 allantoinase; Provisi 99.9 1.4E-23 3.1E-28 197.4 22.2 320 19-400 3-386 (449)
84 PF01979 Amidohydro_1: Amidohy 99.9 7.8E-25 1.7E-29 200.6 12.6 277 77-400 1-327 (333)
85 PRK10027 cryptic adenine deami 99.9 7.2E-23 1.6E-27 195.0 25.7 299 17-400 28-341 (588)
86 PRK09061 D-glutamate deacylase 99.9 7E-22 1.5E-26 188.1 31.7 322 17-400 17-452 (509)
87 PRK09060 dihydroorotase; Valid 99.9 4.1E-22 8.8E-27 187.5 28.0 315 18-400 4-375 (444)
88 PRK08417 dihydroorotase; Provi 99.9 7.2E-23 1.6E-27 189.3 22.4 292 43-400 1-345 (386)
89 PRK09059 dihydroorotase; Valid 99.9 5.2E-22 1.1E-26 185.4 26.7 319 19-400 3-380 (429)
90 PRK06886 hypothetical protein; 99.9 7.1E-22 1.5E-26 175.9 26.3 273 80-388 20-328 (329)
91 TIGR00857 pyrC_multi dihydroor 99.9 1E-21 2.3E-26 183.4 27.4 302 39-400 4-362 (411)
92 TIGR03583 EF_0837 probable ami 99.9 1.4E-21 3.1E-26 180.2 27.0 297 20-400 2-324 (365)
93 COG3454 Metal-dependent hydrol 99.9 7.8E-22 1.7E-26 166.2 18.3 139 224-400 211-352 (377)
94 TIGR03121 one_C_dehyd_A formyl 99.9 2.7E-20 5.8E-25 173.4 25.8 132 21-162 2-137 (556)
95 cd01317 DHOase_IIa Dihydroorot 99.9 8.2E-21 1.8E-25 175.4 18.6 152 223-400 172-335 (374)
96 cd01304 FMDH_A Formylmethanofu 99.9 8.2E-20 1.8E-24 169.3 23.3 127 23-162 1-133 (541)
97 cd01292 metallo-dependent_hydr 99.9 1.7E-19 3.6E-24 160.5 23.0 259 82-384 1-275 (275)
98 PRK01211 dihydroorotase; Provi 99.8 3.4E-19 7.4E-24 164.6 23.3 287 39-400 14-343 (409)
99 PF07969 Amidohydro_3: Amidohy 99.8 7.1E-20 1.5E-24 172.1 17.5 170 215-400 217-400 (404)
100 PRK04250 dihydroorotase; Provi 99.8 8.6E-19 1.9E-23 162.1 24.1 85 25-147 3-87 (398)
101 cd01320 ADA Adenosine deaminas 99.8 4E-18 8.7E-23 154.9 25.6 247 98-389 46-315 (325)
102 PRK09358 adenosine deaminase; 99.8 6.8E-18 1.5E-22 154.1 25.5 248 96-388 52-323 (340)
103 cd01295 AdeC Adenine deaminase 99.8 2.9E-18 6.3E-23 160.7 22.3 253 72-400 1-266 (422)
104 PRK00369 pyrC dihydroorotase; 99.8 6.8E-18 1.5E-22 155.1 23.8 281 39-400 12-328 (392)
105 TIGR01430 aden_deam adenosine 99.8 1.2E-17 2.6E-22 151.5 24.3 243 100-389 47-314 (324)
106 COG0804 UreC Urea amidohydrola 99.8 8E-18 1.7E-22 145.8 19.1 316 5-400 52-431 (568)
107 cd01302 Cyclic_amidohydrolases 99.8 2.3E-17 5E-22 150.0 21.6 255 76-400 1-298 (337)
108 cd01306 PhnM PhnM is believed 99.8 3.4E-17 7.3E-22 145.6 17.9 143 219-400 159-304 (325)
109 PF13147 Amidohydro_4: Amidohy 99.8 9.1E-18 2E-22 151.4 13.4 90 297-400 209-301 (304)
110 COG1229 FwdA Formylmethanofura 99.8 2.5E-16 5.3E-21 136.9 20.8 211 19-244 3-239 (575)
111 cd01318 DHOase_IIb Dihydroorot 99.7 2.9E-16 6.3E-21 143.7 21.8 164 220-400 108-318 (361)
112 KOG3892 N-acetyl-glucosamine-6 99.7 1.3E-15 2.8E-20 125.5 16.2 328 21-400 14-381 (407)
113 PF13594 Amidohydro_5: Amidohy 99.6 2.5E-15 5.4E-20 102.3 5.8 44 43-90 1-44 (68)
114 COG3653 N-acyl-D-aspartate/D-g 99.6 3.8E-12 8.2E-17 112.0 24.3 70 16-91 3-72 (579)
115 cd01294 DHOase Dihydroorotase 99.5 1.7E-11 3.8E-16 111.7 21.9 161 221-398 111-308 (335)
116 cd00443 ADA_AMPD Adenosine/AMP 99.4 3.1E-11 6.8E-16 108.1 20.8 136 221-388 151-294 (305)
117 cd01316 CAD_DHOase The eukaryo 99.3 3E-10 6.5E-15 103.1 18.6 28 366-393 259-286 (344)
118 cd00530 PTE Phosphotriesterase 99.3 1.6E-09 3.5E-14 97.1 22.8 238 124-385 31-293 (293)
119 PTZ00124 adenosine deaminase; 99.3 2.7E-09 5.9E-14 96.8 23.9 136 223-388 206-350 (362)
120 cd01321 ADGF Adenosine deamina 99.2 4.2E-09 9.1E-14 95.5 19.9 146 220-388 176-330 (345)
121 PRK09875 putative hydrolase; P 99.1 1.6E-07 3.5E-12 82.7 23.7 240 124-386 33-292 (292)
122 TIGR00010 hydrolase, TatD fami 99.1 9.9E-08 2.1E-12 83.7 22.6 214 132-387 22-252 (252)
123 PF00962 A_deaminase: Adenosin 99.0 3.6E-08 7.7E-13 90.1 19.1 225 119-388 72-321 (331)
124 cd01310 TatD_DNAse TatD like p 99.0 1.3E-07 2.9E-12 82.8 22.0 137 222-386 107-251 (251)
125 PRK05451 dihydroorotase; Provi 99.0 1.1E-07 2.3E-12 86.9 20.2 159 221-397 116-313 (345)
126 COG1816 Add Adenosine deaminas 98.9 1.5E-07 3.3E-12 83.7 19.0 238 105-388 65-326 (345)
127 PLN02599 dihydroorotase 98.8 6.7E-07 1.5E-11 81.5 20.0 156 222-395 135-330 (364)
128 PRK10812 putative DNAse; Provi 98.7 5.7E-06 1.2E-10 72.4 19.3 139 223-388 111-257 (265)
129 COG1099 Predicted metal-depend 98.6 7.7E-06 1.7E-10 66.6 18.0 193 155-387 57-253 (254)
130 PRK11449 putative deoxyribonuc 98.6 5.1E-06 1.1E-10 72.5 18.3 137 223-387 114-258 (258)
131 PF02126 PTE: Phosphotriestera 98.6 1.4E-06 3.1E-11 77.3 12.9 234 124-385 37-307 (308)
132 TIGR00856 pyrC_dimer dihydroor 98.5 1.4E-05 3E-10 72.8 19.5 151 221-388 113-301 (341)
133 COG0084 TatD Mg-dependent DNas 98.5 1.3E-05 2.8E-10 69.0 17.7 215 132-387 24-256 (256)
134 KOG1097 Adenine deaminase/aden 98.5 1.4E-05 3E-10 71.6 18.2 228 121-388 117-372 (399)
135 COG1735 Php Predicted metal-de 98.5 4.6E-05 9.9E-10 65.6 19.8 274 81-387 17-314 (316)
136 TIGR01431 adm_rel adenosine de 98.5 0.00011 2.3E-09 69.6 24.4 146 221-389 304-457 (479)
137 PRK10425 DNase TatD; Provision 98.4 0.00015 3.2E-09 63.2 22.2 139 223-387 108-258 (258)
138 PF01026 TatD_DNase: TatD rela 98.3 3.3E-05 7.1E-10 67.6 14.9 214 132-386 21-255 (255)
139 PLN03055 AMP deaminase; Provis 97.5 0.0016 3.5E-08 62.4 12.9 98 277-389 440-544 (602)
140 PRK06361 hypothetical protein; 97.5 0.019 4.2E-07 48.7 17.9 200 148-387 10-210 (212)
141 TIGR01429 AMP_deaminase AMP de 97.5 0.0019 4E-08 62.2 12.7 133 225-389 424-566 (611)
142 cd01319 AMPD AMP deaminase (AM 97.4 0.0034 7.4E-08 59.3 12.5 98 277-389 350-454 (496)
143 cd01311 PDC_hydrolase 2-pyrone 97.4 0.052 1.1E-06 47.8 19.5 100 221-335 108-224 (263)
144 PLN02768 AMP deaminase 97.3 0.0031 6.6E-08 62.0 11.4 97 278-389 674-777 (835)
145 PF00449 Urease_alpha: Urease 97.2 0.001 2.2E-08 48.2 5.9 49 6-58 52-101 (121)
146 PTZ00310 AMP deaminase; Provis 97.1 0.008 1.7E-07 62.9 13.3 98 277-389 1133-1237(1453)
147 PTZ00310 AMP deaminase; Provis 96.4 0.02 4.4E-07 60.0 10.0 97 278-389 504-608 (1453)
148 COG2159 Predicted metal-depend 95.7 1.1 2.5E-05 39.9 16.5 147 219-389 140-292 (293)
149 PF04909 Amidohydro_2: Amidohy 95.4 0.098 2.1E-06 46.1 8.7 161 208-387 102-273 (273)
150 KOG3020 TatD-related DNase [Re 95.0 2.3 4.9E-05 37.6 18.0 156 133-306 40-205 (296)
151 COG3618 Predicted metal-depend 94.7 2.7 5.9E-05 36.7 17.2 136 223-387 124-278 (279)
152 PF12890 DHOase: Dihydro-orota 93.6 0.02 4.4E-07 43.1 0.1 36 212-248 55-90 (142)
153 PRK07945 hypothetical protein; 93.0 7.2 0.00016 35.6 16.1 47 287-334 248-295 (335)
154 PRK00912 ribonuclease P protei 92.8 0.99 2.1E-05 39.0 9.3 98 286-398 120-228 (237)
155 COG1387 HIS2 Histidinol phosph 91.6 8.3 0.00018 33.2 14.4 62 287-348 150-211 (237)
156 COG0418 PyrC Dihydroorotase [N 90.6 1.4 3.1E-05 38.5 7.6 108 222-335 117-252 (344)
157 cd01301 rDP_like renal dipepti 85.0 10 0.00022 34.2 9.9 129 224-381 155-306 (309)
158 PRK06740 histidinol-phosphatas 84.3 33 0.00071 31.3 14.6 44 290-333 245-294 (331)
159 COG1831 Predicted metal-depend 83.7 29 0.00062 30.2 14.8 138 219-388 141-283 (285)
160 PRK08609 hypothetical protein; 83.2 51 0.0011 32.7 17.3 44 290-334 485-529 (570)
161 COG1603 RPP1 RNase P/RNase MRP 82.6 24 0.00051 30.0 10.3 97 286-397 115-223 (229)
162 COG2355 Zn-dependent dipeptida 79.8 45 0.00097 30.0 11.7 98 278-386 196-308 (313)
163 COG5016 Pyruvate/oxaloacetate 77.1 37 0.00081 31.4 10.4 104 130-248 103-211 (472)
164 KOG2902 Dihydroorotase [Nucleo 76.7 47 0.001 28.4 10.3 17 78-94 6-22 (344)
165 TIGR01856 hisJ_fam histidinol 75.8 53 0.0012 28.6 14.8 44 289-333 190-239 (253)
166 PRK07328 histidinol-phosphatas 72.3 68 0.0015 28.2 15.9 45 288-333 181-231 (269)
167 TIGR01182 eda Entner-Doudoroff 71.1 58 0.0013 27.3 9.6 77 218-308 15-91 (204)
168 PRK06015 keto-hydroxyglutarate 66.8 76 0.0016 26.6 9.5 76 219-308 12-87 (201)
169 TIGR01496 DHPS dihydropteroate 65.5 90 0.0019 27.3 10.2 62 225-305 63-126 (257)
170 PRK12595 bifunctional 3-deoxy- 65.3 74 0.0016 29.5 10.0 119 217-335 163-299 (360)
171 PF01244 Peptidase_M19: Membra 65.0 34 0.00073 31.1 7.7 93 279-385 208-318 (320)
172 COG4464 CapC Capsular polysacc 63.4 91 0.002 26.3 12.6 17 317-333 180-196 (254)
173 PRK08392 hypothetical protein; 61.6 99 0.0021 26.1 16.8 42 290-333 143-184 (215)
174 PRK14042 pyruvate carboxylase 56.5 2E+02 0.0043 28.8 11.7 103 130-247 101-208 (596)
175 PRK06552 keto-hydroxyglutarate 53.1 1.4E+02 0.003 25.2 11.0 78 219-308 21-99 (213)
176 TIGR01361 DAHP_synth_Bsub phos 51.0 1.7E+02 0.0037 25.6 10.0 114 222-335 75-206 (260)
177 KOG1096 Adenosine monophosphat 50.8 42 0.0009 33.3 5.9 75 279-353 612-693 (768)
178 PF01081 Aldolase: KDPG and KH 50.0 65 0.0014 26.8 6.3 92 219-329 16-107 (196)
179 COG0800 Eda 2-keto-3-deoxy-6-p 48.7 1.6E+02 0.0035 24.8 8.3 92 220-330 22-113 (211)
180 TIGR01362 KDO8P_synth 3-deoxy- 46.4 2E+02 0.0043 25.1 9.3 115 219-333 55-185 (258)
181 PRK13398 3-deoxy-7-phosphohept 44.9 2.2E+02 0.0047 25.1 12.3 117 219-335 74-208 (266)
182 COG3977 Alanine-alpha-ketoisov 43.8 80 0.0017 28.2 6.0 85 218-305 194-282 (417)
183 PRK07114 keto-hydroxyglutarate 43.3 2.1E+02 0.0045 24.4 10.3 80 218-308 22-102 (222)
184 PF02571 CbiJ: Precorrin-6x re 42.5 2.3E+02 0.005 24.7 9.8 161 134-330 62-226 (249)
185 PRK12330 oxaloacetate decarbox 40.0 3.7E+02 0.0079 26.3 11.4 102 130-246 102-210 (499)
186 PF10055 DUF2292: Uncharacteri 39.7 40 0.00087 19.5 2.5 15 42-56 19-33 (38)
187 cd00947 TBP_aldolase_IIB Tagat 39.0 1.5E+02 0.0034 26.2 7.3 18 230-247 63-80 (276)
188 TIGR01858 tag_bisphos_ald clas 38.0 1.8E+02 0.0038 25.9 7.5 18 230-247 66-83 (282)
189 PRK09195 gatY tagatose-bisphos 37.9 1.6E+02 0.0034 26.2 7.2 18 230-247 68-85 (284)
190 PRK08185 hypothetical protein; 37.7 1.7E+02 0.0037 26.0 7.4 20 228-247 60-79 (283)
191 PF02811 PHP: PHP domain; Int 37.2 1.1E+02 0.0025 24.2 6.1 39 132-170 23-64 (175)
192 PRK05718 keto-hydroxyglutarate 36.9 2.6E+02 0.0056 23.6 8.9 76 218-307 22-97 (212)
193 PRK14041 oxaloacetate decarbox 36.9 4E+02 0.0086 25.8 10.7 102 131-247 101-207 (467)
194 COG2876 AroA 3-deoxy-D-arabino 36.5 1.8E+02 0.004 25.4 7.0 89 217-305 90-188 (286)
195 TIGR03849 arch_ComA phosphosul 34.9 2.4E+02 0.0052 24.3 7.5 98 131-244 24-121 (237)
196 PRK12581 oxaloacetate decarbox 34.6 4.3E+02 0.0094 25.5 11.7 102 131-247 111-217 (468)
197 PF11068 YlqD: YlqD protein; 34.5 42 0.00092 25.8 2.7 14 40-53 117-130 (131)
198 PRK12738 kbaY tagatose-bisphos 34.4 2.1E+02 0.0046 25.5 7.5 18 230-247 68-85 (286)
199 COG0826 Collagenase and relate 33.7 3.3E+02 0.0071 25.1 8.8 21 219-239 45-65 (347)
200 COG2131 ComEB Deoxycytidylate 33.2 1.3E+02 0.0028 24.2 5.3 20 39-58 29-48 (164)
201 PRK09140 2-dehydro-3-deoxy-6-p 32.9 3E+02 0.0064 23.1 9.5 76 219-307 18-93 (206)
202 TIGR00167 cbbA ketose-bisphosp 32.9 2.3E+02 0.005 25.3 7.5 11 236-246 77-87 (288)
203 COG2185 Sbm Methylmalonyl-CoA 32.8 2.4E+02 0.0053 22.1 7.4 44 263-308 83-126 (143)
204 TIGR01108 oadA oxaloacetate de 32.6 5.2E+02 0.011 25.9 10.9 102 130-246 96-202 (582)
205 PF07287 DUF1446: Protein of u 31.7 4.3E+02 0.0092 24.6 9.3 23 311-333 148-173 (362)
206 PRK12857 fructose-1,6-bisphosp 31.5 2.2E+02 0.0048 25.4 7.1 20 228-247 66-85 (284)
207 COG0134 TrpC Indole-3-glycerol 31.1 2.6E+02 0.0056 24.4 7.2 30 218-247 138-167 (254)
208 PRK12737 gatY tagatose-bisphos 31.0 2.3E+02 0.005 25.2 7.1 19 229-247 67-85 (284)
209 PRK05588 histidinol-phosphatas 30.2 1.1E+02 0.0023 26.6 5.1 46 288-333 170-220 (255)
210 PRK09856 fructoselysine 3-epim 30.1 3.7E+02 0.0081 23.4 11.0 114 130-244 18-150 (275)
211 PRK12457 2-dehydro-3-deoxyphos 28.7 4.2E+02 0.009 23.5 9.2 115 219-333 69-201 (281)
212 TIGR01235 pyruv_carbox pyruvat 28.5 8.3E+02 0.018 26.9 12.1 109 130-247 630-743 (1143)
213 PRK05835 fructose-bisphosphate 28.4 3.3E+02 0.0072 24.6 7.7 10 237-246 75-84 (307)
214 TIGR03569 NeuB_NnaB N-acetylne 27.9 2.9E+02 0.0062 25.3 7.4 98 219-335 72-177 (329)
215 PRK13802 bifunctional indole-3 27.5 3.2E+02 0.0069 28.0 8.2 114 219-333 143-270 (695)
216 PRK07329 hypothetical protein; 27.5 95 0.0021 26.9 4.2 45 289-333 170-219 (246)
217 PRK09248 putative hydrolase; V 27.2 4.1E+02 0.0088 22.9 13.3 47 288-334 144-196 (246)
218 PRK08610 fructose-bisphosphate 27.1 4.6E+02 0.0099 23.4 11.3 40 131-170 93-140 (286)
219 TIGR00167 cbbA ketose-bisphosp 26.9 4.6E+02 0.01 23.4 11.5 37 131-167 93-137 (288)
220 PRK12331 oxaloacetate decarbox 26.8 5.8E+02 0.013 24.5 11.2 103 130-247 101-208 (448)
221 PRK08123 histidinol-phosphatas 26.3 1E+02 0.0022 27.1 4.2 44 289-333 202-252 (270)
222 PRK07315 fructose-bisphosphate 25.9 3.5E+02 0.0076 24.2 7.5 16 231-246 70-87 (293)
223 COG1751 Uncharacterized conser 25.5 2.7E+02 0.0059 22.0 5.7 43 286-328 72-128 (186)
224 PRK13352 thiamine biosynthesis 25.4 5.8E+02 0.013 24.1 14.9 35 219-253 139-174 (431)
225 cd01725 LSm2 The eukaryotic Sm 25.4 1.8E+02 0.0038 20.2 4.4 38 18-55 34-71 (81)
226 PF01116 F_bP_aldolase: Fructo 25.2 4.9E+02 0.011 23.2 9.7 42 130-171 88-137 (287)
227 PF03102 NeuB: NeuB family; I 25.0 2.7E+02 0.0059 24.1 6.4 67 219-303 52-119 (241)
228 KOG3985 Methylthioadenosine ph 24.9 4.4E+02 0.0095 22.5 10.9 53 316-395 202-259 (283)
229 PF02679 ComA: (2R)-phospho-3- 24.6 1E+02 0.0022 26.7 3.7 98 133-246 39-136 (244)
230 COG0117 RibD Pyrimidine deamin 24.1 75 0.0016 24.8 2.5 19 39-57 29-47 (146)
231 PRK09282 pyruvate carboxylase 23.6 7.6E+02 0.016 24.8 11.0 103 130-247 101-208 (592)
232 PRK06801 hypothetical protein; 23.4 4E+02 0.0086 23.8 7.3 25 221-245 27-51 (286)
233 TIGR03586 PseI pseudaminic aci 23.1 3.8E+02 0.0083 24.5 7.2 90 220-328 74-166 (327)
234 PF04748 Polysacc_deac_2: Dive 22.9 4.7E+02 0.01 22.1 10.4 108 135-243 19-127 (213)
235 PRK14040 oxaloacetate decarbox 22.8 7.9E+02 0.017 24.7 11.5 102 130-246 102-208 (593)
236 TIGR01521 FruBisAldo_II_B fruc 22.8 5.3E+02 0.012 23.8 8.0 84 219-308 23-107 (347)
237 PF14903 WG_beta_rep: WG conta 22.7 72 0.0016 17.3 1.7 15 70-84 3-17 (35)
238 PF01116 F_bP_aldolase: Fructo 22.6 1.8E+02 0.004 25.9 5.0 24 221-244 26-49 (287)
239 PRK07709 fructose-bisphosphate 22.5 5.6E+02 0.012 22.9 11.6 40 131-170 93-140 (285)
240 PF00944 Peptidase_S3: Alphavi 22.4 1.1E+02 0.0023 23.6 2.9 37 38-78 84-120 (158)
241 cd01733 LSm10 The eukaryotic S 22.3 2E+02 0.0043 19.8 4.1 34 19-54 43-76 (78)
242 PRK09196 fructose-1,6-bisphosp 22.2 5.7E+02 0.012 23.6 8.1 85 218-308 24-109 (347)
243 PRK15108 biotin synthase; Prov 22.0 6.3E+02 0.014 23.2 9.0 18 222-239 110-127 (345)
244 COG1099 Predicted metal-depend 21.8 1.5E+02 0.0032 25.3 3.9 98 288-396 118-217 (254)
245 COG0191 Fba Fructose/tagatose 21.7 5.8E+02 0.013 22.8 9.4 98 190-302 28-134 (286)
246 cd01317 DHOase_IIa Dihydroorot 21.6 4.4E+02 0.0095 24.4 7.7 132 68-245 2-142 (374)
247 PRK07709 fructose-bisphosphate 21.4 5.1E+02 0.011 23.1 7.5 11 237-247 78-88 (285)
248 COG0036 Rpe Pentose-5-phosphat 21.1 5.2E+02 0.011 22.0 9.8 95 195-307 20-121 (220)
249 PRK08610 fructose-bisphosphate 21.0 5.1E+02 0.011 23.2 7.4 22 222-243 28-49 (286)
250 PRK06806 fructose-bisphosphate 20.9 4.7E+02 0.01 23.3 7.2 26 220-245 26-51 (281)
251 cd01723 LSm4 The eukaryotic Sm 20.9 2.4E+02 0.0052 19.2 4.3 36 19-55 35-70 (76)
252 PRK08883 ribulose-phosphate 3- 20.5 5.4E+02 0.012 21.9 9.2 72 218-306 42-117 (220)
253 PRK07998 gatY putative fructos 20.3 4.4E+02 0.0095 23.5 6.8 18 229-246 67-84 (283)
254 PF10509 GalKase_gal_bdg: Gala 20.1 25 0.00054 22.0 -0.6 34 43-90 15-48 (52)
No 1
>PRK15493 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional
Probab=100.00 E-value=4.5e-52 Score=389.64 Aligned_cols=361 Identities=31% Similarity=0.463 Sum_probs=307.9
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+++|+|++|++.+....++++++|+|+||+|++||+..... ..++.++||++|++|||||||+|+|+.++.+++...
T Consensus 2 ~~li~~~~v~t~~~~~~~~~~g~V~i~~g~I~~vg~~~~~~---~~~~~~viD~~g~~i~PGlVn~H~H~~~~~~rg~~~ 78 (435)
T PRK15493 2 KTTYVNATIVTMNEQNEVIENGYIIVENDQIIDVNSGEFAS---DFEVDEVIDMKGKWVLPGLVNTHTHVVMSLLRGIGD 78 (435)
T ss_pred eEEEEccEEEEeCCCCcEecCcEEEEECCEEEEEcCccccc---cCCCCeEEeCCCCEEccceeecccCccchhhhccCC
Confidence 58999999999877667889999999999999999853211 112468999999999999999999999999999988
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc---CCHHHHHHHHHHcCCeEEEecccccCCCC
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELLGLRACLVQSTMDCGEG 176 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 176 (400)
+.++.+|+...+|+....+++++.+..++..+.+++++|+||+.|+.. .......+++.+.|+|..++...++.+.
T Consensus 79 ~~~l~~wl~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~a~~~~GiR~~~~~~~~~~~~- 157 (435)
T PRK15493 79 DMLLQPWLETRIWPLESQFTPELAVASTELGLLEMVKSGTTSFSDMFNPIGVDQDAIMETVSRSGMRAAVSRTLFSFGT- 157 (435)
T ss_pred CCCHHHHHHhchhhchhcCCHHHHHHHHHHHHHHHHhCCccEEEccccccccCHHHHHHHHHHcCCcEEEeeeecCCCC-
Confidence 889999999899998888999999999999999999999999999752 2346677888999999988877665431
Q ss_pred CCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhh
Q 015784 177 LPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256 (400)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~ 256 (400)
+. .....+....+.++++... .+.++...+++.+++++++.++++.+.|+++|+++++|+.|+..+.+.+.+.
T Consensus 158 -~~-----~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~t~s~e~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~~~ 230 (435)
T PRK15493 158 -KE-----DEKKAIEEAEKYVKRYYNE-SGMLTTMVAPHSPYTCSTELLEECARIAVENQTMVHIHLSETEREVRDIEAQ 230 (435)
T ss_pred -Cc-----cHHHHHHHHHHHHHHhcCC-CCCeEEEEeCCCCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHH
Confidence 11 1234455566666666542 3578888999999999999999999999999999999999999888888777
Q ss_pred cCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCC
Q 015784 257 RKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPS 335 (400)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~ 335 (400)
++. .+++++.+.|+++.+.++.|+.++++++++++++.|+.+++||.+|+++ .+.+|+++|+++|+++++|||+..+
T Consensus 231 ~g~--~~~~~l~~~Gll~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~l~~g~~p~~~~~~~Gv~v~lGtD~~~~ 308 (435)
T PRK15493 231 YGK--RPVEYAASCGLFKRPTVIAHGVVLNDNERAFLAEHDVRVAHNPNSNLKLGSGIANVKAMLEAGIKVGIATDSVAS 308 (435)
T ss_pred hCC--CHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHHcCCeEEEChHHHHHHhcCcccHHHHHHCCCeEEEccCcccc
Confidence 764 4899999999999999999999999999999999999999999999988 8899999999999999999999777
Q ss_pred CCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 336 NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+++.+++.+|+.+....+... ..+..++++++++++|.+||+++|+++ +|+|++||.|
T Consensus 309 ~~~~d~~~~~~~a~~~~~~~~------~~~~~~~~~~~l~~aT~~gA~~lg~~~-~G~l~~G~~A 366 (435)
T PRK15493 309 NNNLDMFEEMRIATLLQKGIH------QDATALPVETALTLATKGAAEVIGMKQ-TGSLEVGKCA 366 (435)
T ss_pred CCCcCHHHHHHHHHHHHhhcc------CCCCcCCHHHHHHHHhHHHHHHcCCCC-CCccCCCCcC
Confidence 678899999998877665321 123468999999999999999999974 7999999987
No 2
>PRK06687 chlorohydrolase; Validated
Probab=100.00 E-value=9.8e-52 Score=387.57 Aligned_cols=361 Identities=29% Similarity=0.476 Sum_probs=307.0
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
.+|+|++|+++++...++++++|+|+||+|++||+..+.. .....++||++|++|||||||+|+|+.++.+++...+
T Consensus 2 ~~~~n~~vvt~d~~~~~~~~g~VlV~~g~I~aVg~~~~~~---~~~~~~viD~~g~~v~PGlIn~H~H~~~~~~rg~~~~ 78 (419)
T PRK06687 2 KVFQHVNIVTCDQDFHVYLDGILAVKDSQIVYVGQDKPAF---LEQAEQIIDYQGAWIMPGLVNCHTHSAMTGLRGIRDD 78 (419)
T ss_pred cceEeeEEEEeCCCceEecCcEEEEECCEEEEecCccccc---ccccCeEEeCCCCEEccceeeeccCCCccccccccCC
Confidence 3799999999987777889999999999999999864321 1124689999999999999999999999999998878
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc---CCHHHHHHHHHHcCCeEEEecccccCCCCC
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELLGLRACLVQSTMDCGEGL 177 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 177 (400)
.++.+|+..++|+....+++++.+..++..+.++++.|+||+.++.. .......+++.+.|+|..+++..+....
T Consensus 79 ~~~~~wl~~~~~~~~~~~~~~~~~~~~~~a~~e~l~~GvTTv~d~~~~~~~~~~~~~~a~~~~Gir~~~~~~~~~~~~-- 156 (419)
T PRK06687 79 SNLHEWLNDYIWPAESEFTPDMTTNAVKEALTEMLQSGTTTFNDMYNPNGVDIQQIYQVVKTSKMRCYFSPTLFSSET-- 156 (419)
T ss_pred CCHHHHHHhhhccccccCCHHHHHHHHHHHHHHHHhcCcceeehhhccccccHHHHHHHHHHhCCceEeccccccCCc--
Confidence 89999999999998888888888888888899999999999999752 3456678889999999987665543221
Q ss_pred CcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhc
Q 015784 178 PASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR 257 (400)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~ 257 (400)
......+....++++++.....+.+++.++++..+.++++.+.++++.|+++|+++++|+.|+..+.....+.+
T Consensus 157 ------~~~~~~~~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~i~~H~~e~~~e~~~~~~~~ 230 (419)
T PRK06687 157 ------ETTAETISRTRSIIDEILKYKNPNFKVMVAPHSPYSCSRDLLEASLEMAKELNIPLHVHVAETKEESGIILKRY 230 (419)
T ss_pred ------ccHHHHHHHHHHHHHHHhccCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHH
Confidence 12334556677777776655556788889999999999999999999999999999999999987777777666
Q ss_pred CCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCC
Q 015784 258 KVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSN 336 (400)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~ 336 (400)
+. .+++++.+.+.++.+.++.|+.++++++++++++.|+.+++||.+|.++ .+.+|+++|+++|+++++|||+..++
T Consensus 231 g~--~~~~~l~~~g~l~~~~~~~H~~~~~~~~~~~la~~g~~v~~~P~sn~~l~~g~~p~~~~~~~Gv~v~lGtD~~~~~ 308 (419)
T PRK06687 231 GK--RPLAFLEELGYLDHPSVFAHGVELNEREIERLASSQVAIAHNPISNLKLASGIAPIIQLQKAGVAVGIATDSVASN 308 (419)
T ss_pred Cc--CHHHHHHHcCCCCCCeEEEEEecCCHHHHHHHHHcCCeEEECcHHhhhhccCCCcHHHHHHCCCeEEEeCCCCCCC
Confidence 64 4889999999999999999999999999999999999999999999988 88999999999999999999987776
Q ss_pred CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 337 NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++.+++.+|+.+....+... .....++++++|+++|.+||+++|+++++|+|++||.|
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~aT~~gA~~lg~~~~~G~l~~G~~A 366 (419)
T PRK06687 309 NNLDMFEEGRTAALLQKMKS------GDASQFPIETALKVLTIEGAKALGMENQIGSLEVGKQA 366 (419)
T ss_pred CChhHHHHHHHHHHHhcccc------CCCccCCHHHHHHHHhHHHHHHcCCCCCCcccCCCccC
Confidence 78899999999876664321 12345899999999999999999999889999999987
No 3
>PRK09045 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=6.9e-49 Score=370.34 Aligned_cols=369 Identities=33% Similarity=0.548 Sum_probs=301.9
Q ss_pred CCCCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccc
Q 015784 14 SLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQL 93 (400)
Q Consensus 14 ~~~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~ 93 (400)
+.+.+.+++|+|+.|+++++...++++++|+|+||+|++||+....+..+ .+.++||++|++|||||||+|+|+.++.
T Consensus 2 ~~~~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~Vg~~~~~~~~~--~~~~~iD~~g~~v~PG~id~H~Hl~~~~ 79 (443)
T PRK09045 2 MPMEPVDLLIEARWIVPVEPAGVVLEDHAVAIRDGRIVAILPRAEARARY--AAAETVELPDHVLIPGLINAHTHAAMSL 79 (443)
T ss_pred CCcccccEEEEccEEEEeCCCceEeeccEEEEECCEEEEecCcccccccC--CcceEEeCCCCEEecCEeccccChhhHh
Confidence 44556789999999999876567889999999999999999865432212 2468999999999999999999999988
Q ss_pred cccccCCCChhHhhhhcccccc-CCCChhhHHHHHHHHHHHHHhcCcceeeccCcCCHHHHHHHHHHcCCeEEEeccccc
Q 015784 94 AKGIADDVDLMTWLHDRIWPYE-SNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMD 172 (400)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 172 (400)
+++...+.++.+|+....|+.. ...++++.+..++..+.++++.|+|++.++. .......+.+.+.|+|...+...++
T Consensus 80 ~~g~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~G~Ttv~d~~-~~~~~~~~~~~~~G~R~~~~~~~~~ 158 (443)
T PRK09045 80 LRGLADDLPLMTWLQDHIWPAEGAWVSEEFVRDGTLLAIAEMLRGGTTCFNDMY-FFPEAAAEAAHQAGMRAQIGMPVLD 158 (443)
T ss_pred hhhccCCCCHHHHHHhhhhhhhhccCCHHHHHHHHHHHHHHHHhcCCcEEEecc-ccHHHHHHHHHHcCCeEEEeccccc
Confidence 8887777888999988777644 3367788888888899999999999999976 4556667888999999988765554
Q ss_pred CCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhH
Q 015784 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV 252 (400)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~ 252 (400)
. +..+ .......+....+..+.+.. .+.+++.+.++..+.++++.++++++.|+++|+++++|+.++..+...
T Consensus 159 ~----~~~~-~~~~~~~l~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~ 231 (443)
T PRK09045 159 F----PTAW-ASDADEYLAKGLELHDQWRH--HPLISTAFAPHAPYTVSDENLERIRTLAEQLDLPIHIHLHETAQEIAD 231 (443)
T ss_pred C----CCcc-ccCHHHHHHHHHHHHHHhcC--CCcEEEEEeCCCCCCCCHHHHHHHHHHHHHcCCCEEEeecCcHHHHHH
Confidence 2 2111 12234445555566666542 357888889999899999999999999999999999999988776666
Q ss_pred HhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCC
Q 015784 253 VMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTD 331 (400)
Q Consensus 253 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD 331 (400)
..+.++. .+++++...|+++.+.++.|+.++++++++++++.|+.+++||.+++++ .+..|+++++++|+++++|||
T Consensus 232 ~~~~~g~--~~~~~l~~~g~l~~r~~~~H~~~l~~~~~~~la~~g~~i~~~P~~~~~~~~~~~~~~~l~~~Gv~v~lGtD 309 (443)
T PRK09045 232 SLKQHGQ--RPLARLARLGLLGPRLIAVHMTQLTDAEIALLAETGCSVVHCPESNLKLASGFCPVAKLLQAGVNVALGTD 309 (443)
T ss_pred HHHHhCC--CHHHHHHHcCCCCCCeEEEEecCCCHHHHHHHHHcCCeEEECHHHHhhhccCCCcHHHHHHCCCeEEEecC
Confidence 6655554 4889999999999999999999999999999999999999999998876 678999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 332 GAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+++++.+.+++.+++.+....+... ....+++++++|+++|.|||+++|+++++|+|++||.|
T Consensus 310 ~~~~~~~~~~~~~~~~a~~~~~~~~------~~~~~~~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 372 (443)
T PRK09045 310 GAASNNDLDLFGEMRTAALLAKAVA------GDATALPAHTALRMATLNGARALGLDDEIGSLEPGKQA 372 (443)
T ss_pred CCCCCCCccHHHHHHHHHHHHhhcc------CCCCcCCHHHHHHHHhHHHHHHcCCCCCCcccCCCCcC
Confidence 9876667889999998765443210 12346899999999999999999999889999999987
No 4
>TIGR03314 Se_ssnA putative selenium metabolism protein SsnA. Members of this protein family are found exclusively in genomes that contain putative set of labile selenium-dependent enzyme accessory proteins as well as homologs of a labile selenium-dependent purine hydroxylase. A mutant in this gene in Escherichia coli had improved stationary phase viability. The function is unknown.
Probab=100.00 E-value=9.4e-49 Score=367.84 Aligned_cols=358 Identities=25% Similarity=0.418 Sum_probs=297.7
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|++.++....+++++|+|+||+|++||+..+....+ .+.++||++|++|+|||||+|+|+.++..++...+
T Consensus 1 ~li~~~~i~t~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~--~~~~~id~~g~~v~PG~vd~H~H~~~~~~rg~~~d 78 (441)
T TIGR03314 1 LLIGNGTAVQLDPTRPIQEGGDIAIDGDVIKAVGPTEELKQKY--PEATFIDAKGKLIMPGFINTHNHFYSTFARGMMAD 78 (441)
T ss_pred CEEECCEEEecCCCCceEeccEEEEECCEEEEEcCchhhcccC--CCCeEEeCCCCEEecCeeecccchhhhhhcccccc
Confidence 4799999998766555778999999999999999864432212 24589999999999999999999999888887544
Q ss_pred ----CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC------CHHHHHHHHHHcCCeEEEeccc
Q 015784 101 ----VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ------HVSEMAKAVELLGLRACLVQST 170 (400)
Q Consensus 101 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~------~~~~~~~~~~~~g~~~~~~~~~ 170 (400)
.++.+|+...+|+....+++++.+..++..+.+++++|+|++.|+... ..+...+++.+.|+|.+++...
T Consensus 79 ~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~~~~~~~~~a~~~~GiR~~~~~~~ 158 (441)
T TIGR03314 79 IPPPPDFISILKNLWWRLDRALTLEDVYYSGLICSLDAIKSGCTTVIDHHASPNAITGSLSTIRKAADEAGLRTMLCYET 158 (441)
T ss_pred CCCCCCHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHHHcCCeEEEecccccccccchHHHHHHHHHHhCCeEEEeeee
Confidence 378899999899988889999999999999999999999999997411 2456788899999999888776
Q ss_pred ccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhh
Q 015784 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (400)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (400)
++.... ......+....++++++....++.++..++++..++.+++.++++.++|+++++++++|+.|+..+.
T Consensus 159 ~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~p~~~~t~s~~~l~~~~~lA~~~~~~i~~H~~E~~~e~ 231 (441)
T TIGR03314 159 SDRDGG-------KEMQEGVEENIAFIKKSSGKEPYLVEAHIGAHAPFTVSDAGLEMCREAVQATGRGFHIHVAEDIYDV 231 (441)
T ss_pred ecCCCc-------ccHHHHHHHHHHHHHHhccCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCHHHH
Confidence 653211 1123344555566666665445678888999999999999999999999999999999999999988
Q ss_pred hHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEc
Q 015784 251 QVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLG 329 (400)
Q Consensus 251 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~g 329 (400)
+...+.++. .+++++.+.|+++++.++.||.++++++++++++.|+.+++||.+|+++ .+.+|+++|+++||+|++|
T Consensus 232 ~~~~~~~g~--~~~~~l~~~G~l~~~~~~~H~~~~~~~d~~~la~~g~~v~~cP~sn~~l~~G~~p~~~~~~~Gv~v~LG 309 (441)
T TIGR03314 232 EDSHHKYGK--DIVERLADFGLLGSKTLAAHCIYLSDREIELLNETDTFVVHNPESNMGNAVGYNPVLRMFKNGILLGLG 309 (441)
T ss_pred HHHHHHcCC--CHHHHHHHCCCCCCCeEEEEEecCCHHHHHHHHHcCCcEEECHHHHhhhccCCCCHHHHHHCCCEEEEc
Confidence 888887774 5999999999999999999999999999999999999999999999998 8899999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC--CCCCccccccCcCC
Q 015784 330 TDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL--WDNDIGSLEAGKKV 400 (400)
Q Consensus 330 tD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg--~~~~~G~i~~G~~A 400 (400)
||+.. .+++.+|+.+..+.+... ........++++|+|.++|+++| +..++|+|++||.|
T Consensus 310 tD~~~----~d~~~em~~a~~~~~~~~-------~~~~~~~~~~~~~aT~~ga~al~~~l~~~~G~Le~G~~A 371 (441)
T TIGR03314 310 TDGYT----SDMFESLKFANFKHKDAG-------GDLNAAWPESPAMLFENNNEIAERNFGAKFGRLEPGAKA 371 (441)
T ss_pred CCCCC----cCHHHHHHHHHHHhcccc-------CCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc
Confidence 99853 479999999988775331 11122357899999999999996 45568999999987
No 5
>PRK07228 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=2.8e-48 Score=367.30 Aligned_cols=367 Identities=38% Similarity=0.627 Sum_probs=302.5
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
++++|+|++|+++++. ..+++++|+|+||+|++|++.... ....++||++|++|||||||+|+|+.++..++..
T Consensus 1 ~~~~i~~~~vi~~~~~-~~~~~g~V~I~dg~I~~vg~~~~~-----~~~~~vID~~G~~vlPGlId~H~H~~~~~~~g~~ 74 (445)
T PRK07228 1 MTILIKNAGIVTMNAK-REIVDGDVLIEDDRIAAVGDRLDL-----EDYDDHIDATGKVVIPGLIQGHIHLCQTLFRGIA 74 (445)
T ss_pred CeEEEEccEEEecCCC-cEecccEEEEECCEEEEecCCccc-----CcCCeEEeCCCCEEecCEEecccCCccccceecc
Confidence 3589999999997654 356899999999999999985432 1246899999999999999999999988777777
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC-CHHHHHHHHHHcCCeEEEecccccCCCCC
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSEMAKAVELLGLRACLVQSTMDCGEGL 177 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 177 (400)
.+.++.+|+...+|+....+++++.+..++..+.+++++|+||+.+++.. ......+.+.+.|+|...+...++.+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~L~~GvTtv~d~~~~~~~~~~~~a~~~~g~r~~~~~~~~~~~~~- 153 (445)
T PRK07228 75 DDLELLDWLKDRIWPLEAAHDAESMYYSALLGIGELIESGTTTIVDMESVHHTDSAFEAAGESGIRAVLGKVMMDYGDD- 153 (445)
T ss_pred CCCCHHHHHHhhhhhhhhhCCHHHHHHHHHHHHHHHHhcCceEEEccccccChHHHHHHHHHcCCeEEEecceecCCcC-
Confidence 77889999998888887888999999999999999999999999998632 3567788899999998888777664321
Q ss_pred CcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhc
Q 015784 178 PASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR 257 (400)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~ 257 (400)
.+..........+....++++.+.....+.+.....++.....+++.+.++++.|+++|+++++|+.++..+.+.+.+.+
T Consensus 154 ~p~~~~~~~~~~l~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~~~ 233 (445)
T PRK07228 154 VPEGLQEDTEASLAESVRLLEKWHGADNGRIRYAFTPRFAVSCTEELLRGVRDLADEYGVRIHTHASENRGEIETVEEET 233 (445)
T ss_pred CCccccccHHHHHHHHHHHHHHhcCCCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHh
Confidence 11122223445566777777776544344566566777777888999999999999999999999999888777777666
Q ss_pred CCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCC
Q 015784 258 KVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSN 336 (400)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~ 336 (400)
+. ..++++...+.++.+.+++|+.++++++++++++.|+.+++||.+++.+ .+..|+++++++|+++++|||+++.+
T Consensus 234 g~--~~~~~l~~~g~~~~~~~l~H~~~~~~~~~~~~~~~g~~v~~~P~~~~~~~~~~~p~~~~~~~Gv~v~lGtD~~~~~ 311 (445)
T PRK07228 234 GM--RNIHYLDEVGLTGEDLILAHCVWLDEEEREILAETGTHVTHCPSSNLKLASGIAPVPDLLERGINVALGADGAPCN 311 (445)
T ss_pred CC--CHHHHHHHCCCCCCCcEEEEEecCCHHHHHHHHHcCCeEEEChHHhhhcccccCcHHHHHHCCCeEEEcCCCCccC
Confidence 54 4789999999999999999999999999999999999999999999887 78899999999999999999987765
Q ss_pred CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 337 NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+..++|.+++.+..+.+... .....++++++|+++|.|||+++|+++++|+|++|+.|
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~------~~~~~~s~~~al~~~T~~~A~~lg~~~~~G~l~~G~~A 369 (445)
T PRK07228 312 NTLDPFTEMRQAALIQKVDR------LGPTAMPARTVFEMATLGGAKAAGFEDEIGSLEEGKKA 369 (445)
T ss_pred CCccHHHHHHHHHHHhhhcc------CCCcccCHHHHHHHHHHHHHHHhCCCCCccccCCCCcc
Confidence 66789999988766553210 11245899999999999999999998888999999987
No 6
>PRK07203 putative chlorohydrolase/aminohydrolase; Validated
Probab=100.00 E-value=2.9e-48 Score=365.97 Aligned_cols=358 Identities=26% Similarity=0.424 Sum_probs=296.0
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC-
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD- 99 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~- 99 (400)
++|+|++|++.++...++++++|+|+||+|++||+..+....+ .+.++||++|++|+|||||+|+|+.++..++...
T Consensus 2 ~li~~~~i~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~~~~~~--~~~~viD~~g~lv~PGfID~H~H~~~~~~rg~~~~ 79 (442)
T PRK07203 2 LLIGNGTAITRDPAKPVIEDGAIAIEGNVIVEIGTTDELKAKY--PDAEFIDAKGKLIMPGLINSHNHIYSGLARGMMAN 79 (442)
T ss_pred EEEECCEEEeCCCCCceeeccEEEEECCEEEEEeCchhhcccc--CCCeEEeCCCCEEecceeeccccchhhhhcccccc
Confidence 5899999998665545678899999999999999754332211 2458999999999999999999999888887642
Q ss_pred ---CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc------CCHHHHHHHHHHcCCeEEEeccc
Q 015784 100 ---DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG------QHVSEMAKAVELLGLRACLVQST 170 (400)
Q Consensus 100 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~ 170 (400)
..++.+|+...+|+....+++++.+..++..+.+++++|+|++.++.. ...+...+++.+.|+|..++...
T Consensus 80 ~~~~~~l~~~l~~~~~~~~~~~t~e~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~~~~~~~~~a~~~~GiR~~~~~~~ 159 (442)
T PRK07203 80 IPPPPDFISILKNLWWRLDRALTLEDVYYSALICSLEAIKNGVTTVFDHHASPNYIGGSLFTIADAAKKVGLRAMLCYET 159 (442)
T ss_pred cCCCCCHHHHHHhheehhhhcCCHHHHHHHHHHHHHHHHHcCceEEEccccccccccchHHHHHHHHHHhCCeEEEeccc
Confidence 247889999888998888999999999999999999999999998742 12346678889999999887665
Q ss_pred ccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhh
Q 015784 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (400)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (400)
.+.+. .......+....++++.+.....+.+...++++..+..+++.++++.++|+++|+++++|+.|+..+.
T Consensus 160 ~d~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~p~~~~~~s~~~l~~~~~lA~~~g~~i~~H~~E~~~e~ 232 (442)
T PRK07203 160 SDRDG-------EKELQEGVEENIRFIKHIDEAKDDMVEAMFGLHASFTLSDATLEKCREAVKETGRGYHIHVAEGIYDV 232 (442)
T ss_pred ccCCc-------chhHHHHHHHHHHHHHHhcCCCCCceEEEEccCCCcCcCHHHHHHHHHHHHHcCCcEEEEecCChHHH
Confidence 44320 11123445556666777665545578888999999999999999999999999999999999999998
Q ss_pred hHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEc
Q 015784 251 QVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLG 329 (400)
Q Consensus 251 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~g 329 (400)
....+.++. .+++++.+.|+++++.++.||.++++++++++++.|+.+++||.+|+++ .+.+|+++|+++||++++|
T Consensus 233 ~~~~~~~g~--~~v~~l~~~Gll~~~~~~~H~~~~~~~d~~~la~~g~~v~~~P~sn~~l~~g~~p~~~~~~~Gv~v~lG 310 (442)
T PRK07203 233 SDSHKKYGK--DIVERLADFGLLGEKTLAAHCIYLSDEEIDLLKETDTFVVHNPESNMGNAVGYNPVLEMIKNGILLGLG 310 (442)
T ss_pred HHHHHHcCC--CHHHHHHhCCCCCCCcEEEEeecCCHHHHHHHHhcCCeEEECchhhhhcccCCCCHHHHHHCCCeEEEc
Confidence 888887774 5999999999999999999999999999999999999999999999998 8899999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC--CCCCccccccCcCC
Q 015784 330 TDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL--WDNDIGSLEAGKKV 400 (400)
Q Consensus 330 tD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg--~~~~~G~i~~G~~A 400 (400)
||+.. .+++.+|+.+..+.+... ....++.+++++|+|.+||+++| +++++|+|++||.|
T Consensus 311 tD~~~----~d~~~~~~~a~~~~~~~~-------~~~~~~~~~~~~~aT~~gA~~lg~~~~~~~G~l~~G~~A 372 (442)
T PRK07203 311 TDGYT----SDMFESYKVANFKHKHAG-------GDPNVGWPESPAMLFENNNKIAERYFGAKFGILEEGAKA 372 (442)
T ss_pred CCCCC----ccHHHHHHHHHHHhcccc-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcc
Confidence 99753 479999999877765321 11124578999999999999999 46678999999987
No 7
>cd01303 GDEase Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool.
Probab=100.00 E-value=3.4e-48 Score=363.11 Aligned_cols=364 Identities=25% Similarity=0.347 Sum_probs=295.8
Q ss_pred EEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCCCChhHhh
Q 015784 28 IVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWL 107 (400)
Q Consensus 28 i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~ 107 (400)
+.+++....++++++|+|+||+|++||+..+.....+ ++.++||++|++|||||||+|+|+.++..++...+.++.+|+
T Consensus 14 ~~~~d~~~~~~~~g~V~v~~g~I~~vG~~~~~~~~~~-~~~~viD~~g~~v~PGlVn~H~Hl~~~~~rg~~~~~~l~~wl 92 (429)
T cd01303 14 LELVEDALRVVEDGLIVVVDGNIIAAGAAETLKRAAK-PGARVIDSPNQFILPGFIDTHIHAPQYANIGSGLGEPLLDWL 92 (429)
T ss_pred ccccCCcEEEECCeEEEEECCEEEEeCchhhhhhhcC-CCceEEcCCCCEEecceeeeeecccccccccccCCCcHHHHH
Confidence 3455666778899999999999999998655421112 246899999999999999999999998888887788999999
Q ss_pred hhccccccCC-CChhhHHHHHHHHHHHHHhcCcceeeccCcC---CHHHHHHHHHHcCCeEEEecccccCCCCCCccccc
Q 015784 108 HDRIWPYESN-MTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAV 183 (400)
Q Consensus 108 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 183 (400)
...+|+.+.. .+.++.+..++..+.+++++|+|++.+++.. ..+...+++.+.|+|..+++..++... + ....
T Consensus 93 ~~~~~~~e~~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~~~~~--~-~~~~ 169 (429)
T cd01303 93 ETYTFPEEAKFADPAYAREVYGRFLDELLRNGTTTACYFATIHPESTEALFEEAAKRGQRAIAGKVCMDRNA--P-EYYR 169 (429)
T ss_pred HhhhhHHHHhcCCHHHHHHHHHHHHHHHHhCCceEEEeecccChhHHHHHHHHHHHhCCeEEEeeeeecCCC--C-cccc
Confidence 8888876554 4566777777788899999999999998533 345667888899999988776654321 1 1111
Q ss_pred CCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcC-CeeeEecCCCchhhhHHhhhcCCCCC
Q 015784 184 RTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK-TGIHMHVAEIPYENQVVMDTRKVDHG 262 (400)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~-~~v~~H~~~~~~~~~~~~~~~~~~~~ 262 (400)
......+....++++.+... .+.+...++++..+..+++.++++.++|+++| +++++|+.++..+.+.+.+.++...+
T Consensus 170 ~~~~~~~~~~~~~i~~~~~~-~~~v~~~~~p~~~~~~s~e~l~~~~~~A~~~g~~~v~~H~~e~~~e~~~~~~~~g~~~~ 248 (429)
T cd01303 170 DTAESSYRDTKRLIERWHGK-SGRVKPAITPRFAPSCSEELLAALGKLAKEHPDLHIQTHISENLDEIAWVKELFPGARD 248 (429)
T ss_pred cCHHHHHHHHHHHHHHHhCc-CCceEEEEecCcCCcCCHHHHHHHHHHHHHCCCCeEEEeeCCCHHHHHHHHHHcCCCCC
Confidence 22334455666667776654 35688888899999999999999999999999 99999999998888888777764456
Q ss_pred hHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCCCCCCH
Q 015784 263 TVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSI 341 (400)
Q Consensus 263 ~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~ 341 (400)
+++++.+.|+++.+.++.|+.++++++++++++.|+.+++||.+|+.+ .+..|+++|+++|+++++|||+..+ ++.++
T Consensus 249 p~~~l~~~G~l~~~~~l~H~~~l~~~~~~~l~~~g~~v~~~P~sn~~l~~g~~~~~~~~~~Gv~v~lGtD~~~~-~~~d~ 327 (429)
T cd01303 249 YLDVYDKYGLLTEKTVLAHCVHLSEEEFNLLKERGASVAHCPTSNLFLGSGLFDVRKLLDAGIKVGLGTDVGGG-TSFSM 327 (429)
T ss_pred HHHHHHHCCCCCCCcEEEeCCCCCHHHHHHHHHcCCEEEECccchhhhccCCCCHHHHHHCCCeEEEeccCCCC-CCccH
Confidence 999999999999999999999999999999999999999999999988 7889999999999999999998754 56789
Q ss_pred HHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 342 VDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+.+|+.+....+.... ...++.+++++++|+++|.|||+++|+++++|+|++||+|
T Consensus 328 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~al~~aT~~gA~~lg~~~~~Gsle~Gk~A 383 (429)
T cd01303 328 LDTLRQAYKVSRLLGY---ELGGHAKLSPAEAFYLATLGGAEALGLDDKIGNFEVGKEF 383 (429)
T ss_pred HHHHHHHHHHHHhhcc---ccCCcCCCCHHHHHHHHhhHHHHHcCCCCCCcCcCCCCcc
Confidence 9999987766542210 0113456899999999999999999999889999999987
No 8
>PRK12393 amidohydrolase; Provisional
Probab=100.00 E-value=3.5e-47 Score=358.86 Aligned_cols=366 Identities=27% Similarity=0.383 Sum_probs=296.2
Q ss_pred ccEEEEecE-EEeecCCCceeece-eEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccc
Q 015784 19 STMILHNAV-IVTMDKESRVFRNG-GVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (400)
Q Consensus 19 ~~~li~n~~-i~~~~~~~~~~~~~-~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~ 96 (400)
.+++|+|++ |++.++..+.+.++ +|+|+||+|++|++. . +.++.++||++|++|+|||||+|+|+.++.+++
T Consensus 2 ~~~li~~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~Vg~~-~-----~~~~~~viD~~g~~v~PG~VnaH~Hl~~~~~rg 75 (457)
T PRK12393 2 PSLLIRNAAAIMTGLPGDAARLGGPDIRIRDGRIAAIGAL-T-----PLPGERVIDATDCVVYPGWVNTHHHLFQSLLKG 75 (457)
T ss_pred CcEEEECCeEEEecCCCccccccCceEEEECCEEEEEecc-C-----CCCCCeEEeCCCCEEecCEeecccCcccccccc
Confidence 478999995 78765544444454 899999999999982 1 123569999999999999999999999999988
Q ss_pred cc--CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc--------CCHHHHHHHHHHcCCeEEE
Q 015784 97 IA--DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------QHVSEMAKAVELLGLRACL 166 (400)
Q Consensus 97 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~--------~~~~~~~~~~~~~g~~~~~ 166 (400)
.. .+.++.+|+....|+....+++++.+..++..+.+++++|+|++.|+.. ...+...+++.+.|+|..+
T Consensus 76 ~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~a~~~~G~R~~~ 155 (457)
T PRK12393 76 VPAGINQSLTAWLAAVPYRFRARFDEDLFRLAARIGLVELLRSGCTTVADHHYLYHPGMPFDTGDILFDEAEALGMRFVL 155 (457)
T ss_pred cccccCCchHHHhhhCcchhhhhCCHHHHHHHHHHHHHHHHhCCccEeecchhhcccccccchHHHHHHHHHHcCCeEEE
Confidence 74 4567889999888887778899999999999999999999999998741 1246778999999999988
Q ss_pred ecccccCCCCCCcc----cccCCchHHHHHHHHHHHHhccCC-CCCeEEEeecccc-ccCCHHHHHHHHHHHHHcCCeee
Q 015784 167 VQSTMDCGEGLPAS----WAVRTTDDCIQSQKELYAKHHHAA-DGRIRIWFGIRQI-MNATDRLLLETRDMAREFKTGIH 240 (400)
Q Consensus 167 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~e~l~~~~~~a~~~~~~v~ 240 (400)
+...+.....++.. +........+....++.+.+.... .+.+.+.+.++.. +..+++.++++.+.++++|++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~g~~~~ 235 (457)
T PRK12393 156 CRGGATQTRGDHPGLPTALRPETLDQMLADVERLVSRYHDASPDSLRRVVVAPTTPTFSLPPELLREVARAARGMGLRLH 235 (457)
T ss_pred EccccccccccCCCCCCcccccCHHHHHHHHHHHHHHhcCCCcCCceEEEEcCCCCCCCcCHHHHHHHHHHHHHcCCeEE
Confidence 76654432111111 111223444555666666665432 2346677788877 88999999999999999999999
Q ss_pred EecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHH
Q 015784 241 MHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEM 319 (400)
Q Consensus 241 ~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~ 319 (400)
+|+.++..+.+...+.++. ++++++...+.++.+++++|+.++++++++++++.|+.+++||.+|+++ .+.+|+++|
T Consensus 236 ~H~~e~~~~~~~~~~~~g~--~~~~~l~~~g~l~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~lg~g~~~~~~~ 313 (457)
T PRK12393 236 SHLSETVDYVDFCREKYGM--TPVQFVAEHDWLGPDVWFAHLVKLDAEEIALLAQTGTGIAHCPQSNGRLGSGIAPALAM 313 (457)
T ss_pred EEeCCCHHHHHHHHHHhCC--CHHHHHHHcCCCCCCeEEEEEecCCHHHHHHHHHcCCeEEECchhhhhhcccCCCHHHH
Confidence 9999988887777766654 4889999999999999999999999999999999999999999999888 788999999
Q ss_pred HHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcC
Q 015784 320 LHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKK 399 (400)
Q Consensus 320 ~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~ 399 (400)
+++|+++++|||++.++...++|.+|+.+....+.. .....++++++++++|.+||+++|+++ +|+|++|+.
T Consensus 314 ~~~Gv~v~lGtD~~~~~~~~d~~~~~~~a~~~~~~~-------~~~~~~~~~~~l~~~T~~~A~~l~~~~-~G~l~~G~~ 385 (457)
T PRK12393 314 EAAGVPVSLGVDGAASNESADMLSEAHAAWLLHRAE-------GGADATTVEDVVHWGTAGGARVLGLDA-IGTLAVGQA 385 (457)
T ss_pred HHCCCeEEEecCCcccCCCccHHHHHHHHHHHhhhc-------CCCCCCCHHHHHHHHhHHHHHHhCCCC-CCCcCCCCc
Confidence 999999999999877666789999999877665421 112458999999999999999999975 799999998
Q ss_pred C
Q 015784 400 V 400 (400)
Q Consensus 400 A 400 (400)
|
T Consensus 386 A 386 (457)
T PRK12393 386 A 386 (457)
T ss_pred C
Confidence 7
No 9
>PRK09228 guanine deaminase; Provisional
Probab=100.00 E-value=2.5e-47 Score=357.03 Aligned_cols=364 Identities=24% Similarity=0.308 Sum_probs=292.8
Q ss_pred cEEEEecEEE-eec-------CCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcc
Q 015784 20 TMILHNAVIV-TMD-------KESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (400)
Q Consensus 20 ~~li~n~~i~-~~~-------~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~ 91 (400)
..++++..|+ +.. +...++++++|+|+||+|++||+..++...++. ..++||++|++|+|||||+|+|+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~I~~g~I~~Vg~~~~~~~~~~~-~~~viD~~g~lv~PGlVn~H~H~~~ 81 (433)
T PRK09228 3 TKAYRGRLLHFTADPAEVDDEDALRYIEDGLLLVEDGRIVAAGPYAELRAQLPA-DAEVTDYRGKLILPGFIDTHIHYPQ 81 (433)
T ss_pred eEEEEEEEEccCCCccccCCCCcEEEECCeEEEEECCEEEEEcChHHhhhhcCC-CCeEEeCCCCEEecceecccccccc
Confidence 3456665555 222 344578999999999999999986554332222 3589999999999999999999988
Q ss_pred cccccccCCCChhHhhhhccccccCC-CChhhHHHHHHHHHHHHHhcCcceeeccCcC---CHHHHHHHHHHcCCeEEEe
Q 015784 92 QLAKGIADDVDLMTWLHDRIWPYESN-MTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAVELLGLRACLV 167 (400)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~---~~~~~~~~~~~~g~~~~~~ 167 (400)
+..++. .+.++.+|+..+.|+.... .++++.+..++..+.+++++|+|++.+++.. ..+...+.+.+.|+|..++
T Consensus 82 ~~~~g~-~~~~l~~wl~~~~~~~e~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~a~~~~GiR~~~~ 160 (433)
T PRK09228 82 TDMIAS-YGEQLLDWLNTYTFPEERRFADPAYAREVAEFFLDELLRNGTTTALVFGTVHPQSVDALFEAAEARNMRMIAG 160 (433)
T ss_pred hhhccC-CchHHHHHHHhhhhHHHHHhCCHHHHHHHHHHHHHHHHhCCceEEEeccccCHHHHHHHHHHHHHcCCeEEee
Confidence 877663 2346889998888876554 3566677777778899999999999996533 3456678888999999887
Q ss_pred cccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHc-CCeeeEecCCC
Q 015784 168 QSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF-KTGIHMHVAEI 246 (400)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~-~~~v~~H~~~~ 246 (400)
...++.. .+. .........++...++++++... +.+.+.+.++..+..+++.++++.++|+++ ++++++|+.|+
T Consensus 161 ~~~~~~~--~~~-~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~p~~~~t~s~~~l~~~~~lA~~~~~~~i~~Hl~E~ 235 (433)
T PRK09228 161 KVLMDRN--APD-GLRDTAESGYDDSKALIERWHGK--GRLLYAITPRFAPTSTPEQLEAAGALAREHPDVWIQTHLSEN 235 (433)
T ss_pred eeeecCC--CCc-ccccCHHHHHHHHHHHHHHHhCC--CCceEEEECCcCCcCCHHHHHHHHHHHHHCCCCceEEeecCC
Confidence 7766532 111 11122344455666667766543 467788889999999999999999999998 99999999999
Q ss_pred chhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCc
Q 015784 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADIC 325 (400)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~ 325 (400)
..+.+.+.+.++....+++++.+.|+++.+.++.|+.++++++++++++.|+.+++||.+|+++ .+..|+++|+++|++
T Consensus 236 ~~e~~~~~~~~g~~~~~~~~l~~~G~l~~~~~~~H~~~l~~~~~~~la~~g~~v~~~P~sn~~lg~g~~~~~~~~~~Gv~ 315 (433)
T PRK09228 236 LDEIAWVKELFPEARDYLDVYERYGLLGPRAVFAHCIHLEDRERRRLAETGAAIAFCPTSNLFLGSGLFDLKRADAAGVR 315 (433)
T ss_pred hhHHHHHHHHcCCCCCHHHHHHHcCCCCCCeEEEeccCCCHHHHHHHHHcCCeEEECCccHHhhcCCCcCHHHHHHCCCe
Confidence 9998888887776556799999999999999999999999999999999999999999999987 789999999999999
Q ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 326 VSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 326 v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+++|||.... ++.+++.+|+.+....+. ....++++++|+++|.+||+++|+++++|+|++||.|
T Consensus 316 v~lGtD~~~~-~~~d~~~~~~~~~~~~~~---------~~~~~~~~~~l~~aT~~~A~~lg~~~~~G~l~~Gk~A 380 (433)
T PRK09228 316 VGLGTDVGGG-TSFSMLQTMNEAYKVQQL---------QGYRLSPFQAFYLATLGGARALGLDDRIGNLAPGKEA 380 (433)
T ss_pred EEEecCCCCC-CCCCHHHHHHHHHHHhhc---------ccCCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCCC
Confidence 9999998643 567899999988776642 1345899999999999999999999888999999987
No 10
>PRK06038 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=7.5e-47 Score=354.54 Aligned_cols=356 Identities=38% Similarity=0.637 Sum_probs=297.9
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
.+++|+|++|+++++ ..+.+++|+|+||+|++|++... ....++||+.|++|+|||||+|+|+.++.+++..
T Consensus 2 ~~~~~~~~~i~~~~~--~~~~~~~v~v~~g~I~~i~~~~~------~~~~~~id~~g~~v~PG~vd~H~H~~~~~~~g~~ 73 (430)
T PRK06038 2 ADIIIKNAYVLTMDA--GDLKKGSVVIEDGTITEVSESTP------GDADTVIDAKGSVVMPGLVNTHTHAAMTLFRGYA 73 (430)
T ss_pred CCEEEEccEEEECCC--CeeeccEEEEECCEEEEecCCCC------CCCCEEEeCCCCEEecCeeecccCcchhhhhhcc
Confidence 358999999998653 34577899999999999998532 1245899999999999999999999999888888
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCCHHHHHHHHHHcCCeEEEecccccCCCCCC
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLP 178 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 178 (400)
.+.++.+|+....|+....+++++.+..++..+.++++.|+|++.|+. .+.....+++.+.|+|...+....+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~-~~~~~~~~a~~~~GiR~~~~~~~~d~~---- 148 (430)
T PRK06038 74 DDLPLAEWLNDHIWPAEAKLTAEDVYAGSLLACLEMIKSGTTSFADMY-FYMDEVAKAVEESGLRAALSYGMIDLG---- 148 (430)
T ss_pred CCCCHHHHHHhhhhhchhcCCHHHHHHHHHHHHHHHHhcCceeEEccc-cCHHHHHHHHHHhCCeEEEEchhccCC----
Confidence 778999999988887777788899999999999999999999999986 455667788889999987765443321
Q ss_pred cccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcC
Q 015784 179 ASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK 258 (400)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~ 258 (400)
........++...++++.+.....+.+....+++....++++.++++++.|+++|+++.+|+.++..+...+.+.++
T Consensus 149 ---~~~~~~~~l~~~~~~i~~~~~~~~g~v~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~G 225 (430)
T PRK06038 149 ---DDEKGEAELKEGKRFVKEWHGAADGRIKVMYGPHAPYTCSEEFLSKVKKLANKDGVGIHIHVLETEAELNQMKEQYG 225 (430)
T ss_pred ---CccchHHHHHHHHHHHHHhcCCCCCceEEEEeCCcCccCCHHHHHHHHHHHHHcCCcEEEEcCCCHHHHHHHHHHhC
Confidence 11123445556667777776554567888888999899999999999999999999999999999887777776666
Q ss_pred CCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCCC
Q 015784 259 VDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNN 337 (400)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~ 337 (400)
.. +++++.+.++++.+++++|+.++++++++++++.|+.+++||.+|+.+ .+..|+++++++|+++++|||++.++.
T Consensus 226 ~~--~i~~l~~~g~l~~r~~~~H~~~l~~~~~~~la~~g~~v~~~P~~n~~~~~~~~p~~~~~~~Gv~v~lGtD~~~~~~ 303 (430)
T PRK06038 226 MC--SVNYLDDIGFLGPDVLAAHCVWLSDGDIEILRERGVNVSHNPVSNMKLASGIAPVPKLLERGVNVSLGTDGCASNN 303 (430)
T ss_pred CC--HHHHHHHcCCCCCCeEEEEEecCCHHHHHHHHhcCCEEEEChHHhhhhccCCCCHHHHHHCCCeEEEeCCCCccCC
Confidence 53 889999999999999999999999999999999999999999999887 788999999999999999999876656
Q ss_pred CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 338 RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
..+++.+|+.+....+... .....++++++|+++|.|||++||++ .|+|++||.|
T Consensus 304 ~~d~~~~~~~a~~~~~~~~------~~~~~~~~~~al~~aT~~gA~~lg~~--~G~l~~G~~A 358 (430)
T PRK06038 304 NLDMFEEMKTAALLHKVNT------MDPTALPARQVLEMATVNGAKALGIN--TGMLKEGYLA 358 (430)
T ss_pred CcCHHHHHHHHHHHhhhcc------CCCCcCCHHHHHHHHhHHHHHHhCCC--CCccCCCccc
Confidence 7899999998776654221 12346899999999999999999996 4999999987
No 11
>PRK08203 hydroxydechloroatrazine ethylaminohydrolase; Reviewed
Probab=100.00 E-value=1e-46 Score=356.61 Aligned_cols=365 Identities=31% Similarity=0.504 Sum_probs=295.0
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccc--c
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI--A 98 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~--~ 98 (400)
+++.|+.|+++++...++++++|+|+||+|++|++..+++. ++.++||++|++|||||||+|+|+.+...++. .
T Consensus 4 ~i~~~~~v~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~~~~----~~~~vID~~g~~v~PGlVn~H~H~~~~~~~g~~~~ 79 (451)
T PRK08203 4 WIKNPLAIVTMDAARREIADGGLVVEGGRIVEVGPGGALPQ----PADEVFDARGHVVTPGLVNTHHHFYQTLTRALPAA 79 (451)
T ss_pred EEEeccEEEEeCCCceEeeccEEEEECCEEEEEeCCccCCC----CCCeEEeCCCCEEecceEeccccccchhccccccc
Confidence 34555799998876667899999999999999999654321 24689999999999999999999999888877 6
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC-------CHHHHHHHHHHcCCeEEEecccc
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-------HVSEMAKAVELLGLRACLVQSTM 171 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~ 171 (400)
.+.++.+|+.. .++....+++++.+..++..+.+++++|+|++.+++.. ..+...+++.+.|+|...+...+
T Consensus 80 ~~~~~~~~~~~-~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~ 158 (451)
T PRK08203 80 QDAELFPWLTT-LYPVWARLTPEMVRVATQTALAELLLSGCTTSSDHHYLFPNGLRDALDDQIEAAREIGMRFHATRGSM 158 (451)
T ss_pred CCCcHHHHHHH-HhHHHHhCCHHHHHHHHHHHHHHHHhcCcCEEEcceeeccccccchHHHHHHHHHHcCCeEEEeccee
Confidence 67788899865 45555678889999999999999999999999997521 15667888999999998876554
Q ss_pred cCCC---CCCcccccCCchHHHHHHHHHHHHhccCCC-CCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCc
Q 015784 172 DCGE---GLPASWAVRTTDDCIQSQKELYAKHHHAAD-GRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (400)
Q Consensus 172 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~ 247 (400)
.... ..++..........++...+.++++..... +.+++.++++..+..+++.+.++++.|+++|+++++|+.++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~ 238 (451)
T PRK08203 159 SLGESDGGLPPDSVVEDEDAILADSQRLIDRYHDPGPGAMLRIALAPCSPFSVSRELMRESAALARRLGVRLHTHLAETL 238 (451)
T ss_pred ecCCccCCCCccccccCHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCH
Confidence 3321 111111122334455566666666543322 578888888888899999999999999999999999999988
Q ss_pred hhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcE
Q 015784 248 YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICV 326 (400)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v 326 (400)
.+.....+.++. .+++++.+.|.++.++++.|+.++++++++++++.|+.+++||.+++++ .+..|+++++++|+++
T Consensus 239 ~~~~~~~~~~g~--~~~~~l~~~g~l~~~~~~~H~~~l~~~~~~~la~~g~~v~~~P~~~~~l~~~~~~~~~~~~~Gv~v 316 (451)
T PRK08203 239 DEEAFCLERFGM--RPVDYLEDLGWLGPDVWLAHCVHLDDAEIARLARTGTGVAHCPCSNMRLASGIAPVRELRAAGVPV 316 (451)
T ss_pred HHHHHHHHHhCC--CHHHHHHHcCCCCCCeEEEEEeCCCHHHHHHHHhcCCeEEECcHHhhhhccCCCCHHHHHHCCCeE
Confidence 877766655554 4899999999999999999999999999999999999999999999887 7889999999999999
Q ss_pred EEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 327 SLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 327 ~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++|||++.+++..+++.+++.+....+... ....++++++|+++|.|||+++|++ ++|+|++||.|
T Consensus 317 ~lGtD~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~~~~l~~~T~~~A~~lg~~-~~G~l~~G~~A 382 (451)
T PRK08203 317 GLGVDGSASNDGSNLIGEARQALLLQRLRY-------GPDAMTAREALEWATLGGARVLGRD-DIGSLAPGKLA 382 (451)
T ss_pred EEecCCCccCCCcCHHHHHHHHHHHhhccc-------CCCCCCHHHHHHHHHHHHHHHhCCC-CCCCcCCCCcc
Confidence 999998766567889999988766554220 1235899999999999999999998 57999999987
No 12
>PRK06380 metal-dependent hydrolase; Provisional
Probab=100.00 E-value=1.2e-46 Score=353.40 Aligned_cols=352 Identities=34% Similarity=0.527 Sum_probs=289.2
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+++|+|++|+++++. ..+.+++|+|+||+|++||+..+ .+.++||++|++|+|||||+|+|+.++..++...
T Consensus 2 ~~li~~~~v~~~~~~-~~~~~~~v~i~~g~I~~ig~~~~-------~~~~viD~~g~~v~PG~Vd~H~Hl~~~~~rg~~~ 73 (418)
T PRK06380 2 SILIKNAWIVTQNEK-REILQGNVYIEGNKIVYVGDVNE-------EADYIIDATGKVVMPGLINTHAHVGMTASKGLFD 73 (418)
T ss_pred eEEEEeeEEEECCCC-ceeeeeeEEEECCEEEEecCCCC-------CCCEEEECCCCEEccCEEeeccCCCccccCCccc
Confidence 479999999987543 34568999999999999998532 2458999999999999999999999999998888
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCCHHHHHHHHHHcCCeEEEecccccCCCCCCc
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPA 179 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 179 (400)
+.++.+|+.. .|+....+++++.+..++..+.+++++|||++.|+. ...+...+++.+.|+|.+++...++... ..
T Consensus 74 ~~~l~~~~~~-~~~~~~~~~~e~~~~~~~~~~~e~l~~G~Tt~~d~~-~~~~~~~~a~~~~G~r~~~~~~~~~~~~--~~ 149 (418)
T PRK06380 74 DVDLEEFLMK-TFKYDSKRTREGIYNSAKLGMYEMINSGITAFVDLY-YSEDIIAKAAEELGIRAFLSWAVLDEEI--TT 149 (418)
T ss_pred CCCHHHHHHH-HHhhhhcCCHHHHHHHHHHHHHHHHhcCCeEEEccc-cChHHHHHHHHHhCCeEEEecccccCCc--cc
Confidence 8899999987 678778889999999999999999999999999986 3456777888999999988766654321 00
Q ss_pred ccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCC
Q 015784 180 SWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV 259 (400)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~ 259 (400)
..........++++++.. .+.++..++++..+..+++.++++++.|+++|+++++|+.++..+.......++
T Consensus 150 -----~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g- 221 (418)
T PRK06380 150 -----QKGDPLNNAENFIREHRN--EELVTPSIGVQGIYVANDETYLKAKEIAEKYDTIMHMHLSETRKEVYDHVKRTG- 221 (418)
T ss_pred -----ccchHHHHHHHHHHHhcC--CCCeEEEEECCCCccCCHHHHHHHHHHHHHcCCCEEEEeCCcHHHHHHHHHHhC-
Confidence 011123344455555543 356888888999999999999999999999999999999998766554444444
Q ss_pred CCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-c-CcccHHHHHHcCCcEEEcCCCCCCCC
Q 015784 260 DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-L-GFAPIKEMLHADICVSLGTDGAPSNN 337 (400)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~-~~~~~~~~~~~Gv~v~~gtD~~~~~~ 337 (400)
..+++++...+.++.+.++.|+.++++++++++++.|+.+++||.+++++ . +..|+++++++|+++++|||+..+++
T Consensus 222 -~~~ie~~~~~g~l~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~l~~~g~~p~~~~~~~Gv~v~lGTD~~~~~~ 300 (418)
T PRK06380 222 -ERPVEHLEKIGFLNSKLIAAHCVWATYHEIKLLSKNGVKVSWNSVSNFKLGTGGSPPIPEMLDNGINVTIGTDSNGSNN 300 (418)
T ss_pred -CCHHHHHHHCCCCCCCeEEEEeecCCHHHHHHHHHcCCEEEECHHHHHhhccCCCCcHHHHHHCCCeEEEcCCCCcCCC
Confidence 35899999999999999999999999999999999999999999999887 4 68999999999999999999876656
Q ss_pred CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 338 RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
..+++.+|+.+....+... ..+..++++++|+++|.|+|++||++ .|+|++||+|
T Consensus 301 ~~d~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~aT~~gA~~lg~~--~G~l~~G~~A 355 (418)
T PRK06380 301 SLDMFEAMKFSALSVKNER------WDASIIKAQEILDFATINAAKALELN--AGSIEVGKLA 355 (418)
T ss_pred CcCHHHHHHHHHHHhhhcc------CCCCcCCHHHHHHHHHHHHHHHhCCC--CCccCCCccC
Confidence 7899999998765443210 11224899999999999999999994 6999999987
No 13
>PRK08418 chlorohydrolase; Provisional
Probab=100.00 E-value=2.1e-46 Score=347.80 Aligned_cols=353 Identities=22% Similarity=0.268 Sum_probs=279.3
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|++.+.....++++.|+|+ |+|++||+..+.+...+ +.++||+.|++|+|||||+|+|+.++..++...+
T Consensus 2 ~~i~~~~v~t~~~~~~~~~~~~v~v~-~~I~~ig~~~~~~~~~~--~~~vid~~g~~v~PG~Vn~H~H~~~~~~rg~~~~ 78 (408)
T PRK08418 2 KIIGASYIFTCDENFEILEDGAVVFD-DKILEIGDYENLKKKYP--NAKIQFFKNSVLLPAFINPHTHLEFSANKTTLDY 78 (408)
T ss_pred EEEEccEEEecCCCCceeeccEEEEC-CEEEEecCHHHHHhhCC--CCcEEecCCcEEccCccccccchhhhhhccccCC
Confidence 47999999987755567899999999 99999998654433222 3469999999999999999999999888887777
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCCHHHHHHHHHHcCCeEEEecccccCCCCCCcc
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 180 (400)
.++.+|+...+++.. .+.++..+..++..+.+++++|+||+.++... ....+++.+.|+|.++....+... ..
T Consensus 79 ~~~~~wl~~~~~~~~-~l~~~~~~~~~~~~~~E~l~~GtTtv~d~~~~--~~~~~a~~~~GiR~~~~~~~~~~~----~~ 151 (408)
T PRK08418 79 GDFIPWLGSVINHRE-DLLEKCKGALIQQAINEMLKSGVGTIGAISSF--GIDLEICAKSPLRVVFFNEILGSN----AS 151 (408)
T ss_pred CchHHHHHHHhhhhh-hcCHHHHHHHHHHHHHHHHhcCceEEEEeecc--hhhHHHHHhcCCeEEEEeeeeCCC----cc
Confidence 788999987766543 45666777777788899999999999987632 233578889999998765443221 11
Q ss_pred cccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCC-
Q 015784 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV- 259 (400)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~- 259 (400)
+ .........+..........+.+...+++|..++++++.++++.++|+++|+++++|+.|+..+.+.+.+.++.
T Consensus 152 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~aph~~~t~s~e~l~~~~~~A~~~~~~i~~H~~E~~~E~~~~~~~~G~~ 227 (408)
T PRK08418 152 A----VDELYQDFLARFEESKKFKSKKFIPAIAIHSPYSVHPILAKKALQLAKKENLLVSTHFLESKAEREWLEESKGWF 227 (408)
T ss_pred c----hhhhHHHHHHHHHhhhcccCCceeEEEeCCCCCCCCHHHHHHHHHHHHHcCCeEEEEecCCHHHHHHHHhccCch
Confidence 1 01111111122222222233568888999999999999999999999999999999999999988877766552
Q ss_pred -------------CCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCc
Q 015784 260 -------------DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADIC 325 (400)
Q Consensus 260 -------------~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~ 325 (400)
..++++++...+ +.+.++.|+.++++++++++++.|+.+++||.+|+++ .+.+|+++|+++|++
T Consensus 228 ~~~~~~~~~~~~~~~~pv~~l~~~g--~~~~~~~H~~~~~~~di~~la~~g~~v~~cP~sn~~lg~g~~p~~~~~~~Gi~ 305 (408)
T PRK08418 228 KKFFEKFLKEPKPLYTPKEFLELFK--GLRTLFTHCVYASEEELEKIKSKNASITHCPFSNRLLSNKALDLEKAKKAGIN 305 (408)
T ss_pred hhhhhhhcccccccCCHHHHHHHhC--CCCeEEEecccCCHHHHHHHHHcCCcEEECHhHHHHhcCCCccHHHHHhCCCe
Confidence 235888888887 4688999999999999999999999999999999998 889999999999999
Q ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 326 VSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 326 v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+++|||+..++++.+++.+|+.+....+.. ....+++++|+++|.|+|++||++ .|+|++||.|
T Consensus 306 v~lGtD~~~~~~~~~~~~em~~~~~~~~~~---------~~~~~~~~~l~~aT~~gA~alg~~--~G~l~~G~~A 369 (408)
T PRK08418 306 YSIATDGLSSNISLSLLDELRAALLTHANM---------PLLELAKILLLSATRYGAKALGLN--NGEIKEGKDA 369 (408)
T ss_pred EEEeCCCCCCCCCcCHHHHHHHHHHHhccC---------CccccHHHHHHHHHHHHHHHhCCC--CccccCCCcc
Confidence 999999877777899999999877654321 111357899999999999999996 5999999987
No 14
>PRK08204 hypothetical protein; Provisional
Probab=100.00 E-value=3.2e-46 Score=353.91 Aligned_cols=362 Identities=24% Similarity=0.351 Sum_probs=288.6
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
.+++|+|++|++.++....+++++|+|+||+|++|++..+. .+.++||++|++|+|||||+|+|+.++..++..
T Consensus 2 ~~~li~~~~v~~~~~~~~~~~~~~v~V~~g~I~~Vg~~~~~------~~~~viD~~g~~v~PGlId~H~H~~~~~~~~~~ 75 (449)
T PRK08204 2 KRTLIRGGTVLTMDPAIGDLPRGDILIEGDRIAAVAPSIEA------PDAEVVDARGMIVMPGLVDTHRHTWQSVLRGIG 75 (449)
T ss_pred CcEEEECcEEEecCCCCCccccceEEEECCEEEEecCCCCC------CCCeEEeCCCCEEecCEEeeeeccchhhhcccc
Confidence 46799999999877655677899999999999999986431 245899999999999999999999988888877
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc-----CCHHHHHHHHHHcCCeEEEecccccC
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QHVSEMAKAVELLGLRACLVQSTMDC 173 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~ 173 (400)
.+.++.+|+....++....+++++.+..+...+.+++++|||++.+++. .......+.+...|+|..++......
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~L~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~G~r~~~~~~~~~~ 155 (449)
T PRK08204 76 ADWTLQTYFREIHGNLGPMFRPEDVYIANLLGALEALDAGVTTLLDWSHINNSPEHADAAIRGLAEAGIRAVFAHGSPGP 155 (449)
T ss_pred CCCcHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHhcCCeEEeecccccCChhHHHHHHHHHHHcCCeEEEEccccCC
Confidence 7778889988777777778888888999888889999999999998652 23456678888999998876655443
Q ss_pred CCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHH
Q 015784 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV 253 (400)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~ 253 (400)
++ .+..............+++++....+..+.....++.....++|.+.++++.|++.|+++++|+.++...
T Consensus 156 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~---- 227 (449)
T PRK08204 156 SP----YWPFDSVPHPREDIRRVKKRYFSSDDGLLTLGLAIRGPEFSSWEVARADFRLARELGLPISMHQGFGPWG---- 227 (449)
T ss_pred CC----CCCcchhhhhHHHHHHHHHhhccCCCCceEEEEecCCcccCCHHHHHHHHHHHHHcCCcEEEEEcCCCcc----
Confidence 32 2222223344445556666665554445656566666677788999999999999999999999887542
Q ss_pred hhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCC
Q 015784 254 MDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDG 332 (400)
Q Consensus 254 ~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~ 332 (400)
.....++.+...++++.+.+++|+.++++++++++++.|+.+++||.++..+ .+..|++.++++|+++++|||+
T Consensus 228 -----~~~~~~~~l~~~g~~~~~~~i~H~~~~~~~~~~~la~~g~~v~~~P~~~~~~g~~~~~~~~~~~~Gv~v~lGtD~ 302 (449)
T PRK08204 228 -----ATPRGVEQLHDAGLLGPDLNLVHGNDLSDDELKLLADSGGSFSVTPEIEMMMGHGYPVTGRLLAHGVRPSLGVDV 302 (449)
T ss_pred -----cCCCHHHHHHHCCCCCCCeEEEecCCCCHHHHHHHHHcCCCEEEChHHHhhhcCCCCcHHHHHhcCCceeecccc
Confidence 1234778889999999999999999999999999999999999999998877 6788999999999999999998
Q ss_pred CCCCCCCCHHHHHHHHHHHhcccccc-----cCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 333 APSNNRMSIVDEMYLASLINKGREVF-----ANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++. .+.++|.+|+.+....+..... ........+++++++|+++|.|+|+++|+++++|+|++||.|
T Consensus 303 ~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~gA~~lg~~~~~G~le~Gk~A 374 (449)
T PRK08204 303 VTS-TGGDMFTQMRFALQAERARDNAVHLREGGMPPPRLTLTARQVLEWATIEGARALGLEDRIGSLTPGKQA 374 (449)
T ss_pred CCC-CCcCHHHHHHHHHHHHHhhcccccccccccCCCcCCCCHHHHHHHHhHHHHHHcCCCCCCcccCCCCcC
Confidence 644 5688999999987665422110 001112457999999999999999999999889999999987
No 15
>TIGR02967 guan_deamin guanine deaminase. This model describes guanine deaminase, which hydrolyzes guanine to xanthine and ammonia. Xanthine can then be converted to urate by xanthine dehydrogenase, and urate subsequently degraded. In some bacteria, the guanine deaminase gene is found near the xdhABC genes for xanthine dehydrogenase. Non-homologous forms of guanine deaminase also exist, as well as distantly related forms outside the scope of this model.
Probab=100.00 E-value=4.7e-46 Score=347.66 Aligned_cols=347 Identities=23% Similarity=0.352 Sum_probs=281.6
Q ss_pred eeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCCCChhHhhhhccccccC
Q 015784 37 VFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYES 116 (400)
Q Consensus 37 ~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (400)
++++++|+|+||+|++||+..+.....+ .+.++||++|++|||||||+|+|+.++..++ ..+.++.+|+....|+...
T Consensus 3 ~~~~~~V~V~~g~I~~Vg~~~~~~~~~~-~~~~viD~~g~~v~PGlId~H~Hl~~~~~~g-~~~~~~~~~~~~~~~~~~~ 80 (401)
T TIGR02967 3 YFEDGLLVVENGRIVAVGDYAELKETLP-AGVEIDDYRGHLIMPGFIDTHIHYPQTEMIA-SYGEQLLEWLEKYTFPTEA 80 (401)
T ss_pred EEeceEEEEECCEEEEecCcchhhhccC-CCCeEEeCCCCEEecceeecccCchhhhhcc-cCCchHHHHHhhCcCcccc
Confidence 5678899999999999998654332222 2458999999999999999999998887776 4566788999887776555
Q ss_pred C-CChhhHHHHHHHHHHHHHhcCcceeeccCcCC---HHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHH
Q 015784 117 N-MTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQS 192 (400)
Q Consensus 117 ~-~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (400)
. .++++.+..+...+.+++++|+|++.+++... .....+.+.+.|+|...+...++.. ++..+ .......+..
T Consensus 81 ~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~d~~--~~~~~-~~~~~~~~~~ 157 (401)
T TIGR02967 81 RFADPDHAEEVAEFFLDELLRNGTTTALVFATVHPESVDALFEAALKRGMRMIAGKVLMDRN--APDYL-RDTAESSYDE 157 (401)
T ss_pred ccCCHHHHHHHHHHHHHHHHhCCCcEEEeccccCHHHHHHHHHHHHHCCCeEEEeeeeecCC--CCccc-ccCHHHHHHH
Confidence 4 35666677777788899999999999986443 2456788899999988777665422 22111 1123344555
Q ss_pred HHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHc-CCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhC
Q 015784 193 QKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF-KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIE 271 (400)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~-~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 271 (400)
..++++++.. .+.+++...++.....+++.++++++.|+++ |+++++|+.++..+.+...+.++.....++++.+.|
T Consensus 158 ~~~~i~~~~~--~g~i~~~~~~~~~~~~s~e~l~~~~~~A~~~~g~~v~~H~~e~~~~~~~~~~~~~~~~~~~~~l~~~g 235 (401)
T TIGR02967 158 SKALIERWHG--KGRLLYAVTPRFAPTSSPEQLAAAGELAKEYPDVYVQTHLSENKDEIAWVKELFPEAKDYLDVYDHYG 235 (401)
T ss_pred HHHHHHHHhC--cCCceEEEECCcCCcCcHHHHHHHHHHHHhCCCCeeEEEECCCchHHHHHHHHcCCCCcHHHHHHHCC
Confidence 6666666554 2567777888888899999999999999999 999999999998888888877776556789999999
Q ss_pred CCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHH
Q 015784 272 FLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASL 350 (400)
Q Consensus 272 ~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~ 350 (400)
+++.+.++.|+.++++++++++++.|+.+++||.+|+++ .+..|++.|+++|+++++|||+... +..+++.+++.+..
T Consensus 236 ~lg~~~~~~H~~~~~~~~~~~l~~~g~~v~~~P~~~~~~~~g~~~~~~~~~~Gv~v~lGtD~~~~-~~~~~~~~~~~~~~ 314 (401)
T TIGR02967 236 LLGRRSVFAHCIHLSDEECQRLAETGAAIAHCPTSNLFLGSGLFNLKKALEHGVRVGLGTDVGGG-TSFSMLQTLREAYK 314 (401)
T ss_pred CCCCCeEEEecccCCHHHHHHHHHcCCeEEEChHHHHHhccCCCCHHHHHHCCCeEEEecCCCCC-CCcCHHHHHHHHHH
Confidence 999999999999999999999999999999999999887 7889999999999999999998643 45789999998776
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
..+.. ..+++++++|+++|.|||++||+++++|+|++||.|
T Consensus 315 ~~~~~---------~~~~~~~~~l~~aT~~~A~~lg~~~~~G~i~~G~~A 355 (401)
T TIGR02967 315 VSQLQ---------GARLSPFEAFYLATLGGARALDLDDRIGNFEPGKEA 355 (401)
T ss_pred Hhhhc---------CCCCCHHHHHHHHHHHHHHHhCCcCCccccCCCCcc
Confidence 65422 235899999999999999999999889999999987
No 16
>PRK08393 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=6.5e-46 Score=347.87 Aligned_cols=355 Identities=34% Similarity=0.557 Sum_probs=294.7
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+++|+|++|+++++ ....+++|+|+||+|++|++.... +..++||+.|++|+|||||+|+|+.++..++...
T Consensus 2 ~~~i~~~~i~~~~~--~~~~~~~i~i~~g~I~~v~~~~~~------~~~~~id~~~~~v~Pg~vd~H~H~~~~~~rg~~~ 73 (424)
T PRK08393 2 SILIKNGYVIYGEN--LKVIRADVLIEGNKIVEVKRNINK------PADTVIDASGSVVSPGFINAHTHSPMVLLRGLAD 73 (424)
T ss_pred eEEEECcEEEeCCC--CceecceEEEECCEEEEecCCCCC------CCCeEEeCCCCEEccCeeeeccCcchHhhhhccC
Confidence 58999999998653 344678999999999999975321 2457999999999999999999999998888888
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCCHHHHHHHHHHcCCeEEEecccccCCCCCCc
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPA 179 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 179 (400)
+.++.+|+....|+....+++++.+..++..+.+++++|+||+.++. .......+++...|+|.+......... .+
T Consensus 74 ~~~l~~~l~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~-~~~~~~~~a~~~~G~r~~~~~~~~~~~---~~ 149 (424)
T PRK08393 74 DVPLMEWLQNYIWPRERKLKRKDIYWGAYLGLLEMIKSGTTTFVDMY-FHMEEVAKATLEVGLRGYLSYGMVDLG---DE 149 (424)
T ss_pred CCCHHHHHHhhhccccccCCHHHHHHHHHHHHHHHHhcCceEEeccc-cCHHHHHHHHHHhCCeEEEeceEecCC---Cc
Confidence 88999999988888777788899999999999999999999999986 456777888889999988765544321 11
Q ss_pred ccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCC
Q 015784 180 SWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV 259 (400)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~ 259 (400)
......+....+.++.+.....+.+...++++..+.++++.++++++.|+++|+++++|+.++..+.+...+.++.
T Consensus 150 ----~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~p~~~~~~s~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~ 225 (424)
T PRK08393 150 ----EKREKEIKETEKLMEFIEKLNSPRVHFVFGPHAPYTCSLALLKWVREKAREWNKLITIHLSETMDEIKQIREKYGK 225 (424)
T ss_pred ----cchHHHHHHHHHHHHHHhcCCCCceEEEEeCCcCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCc
Confidence 1123344445555555555545567777788888889999999999999999999999999999888888877764
Q ss_pred CCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCCCC
Q 015784 260 DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNR 338 (400)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~ 338 (400)
.+++.+...|+++.+.++.|+.++++++++++++.|+.+++||.+|.++ .+..|+++++++|+++++|||++.++..
T Consensus 226 --~~~~~l~~~G~l~~~~~~~H~~~l~~~~l~~la~~g~~v~~~P~sn~~lg~g~~~~~~~~~~Gv~v~lGtD~~~~~~~ 303 (424)
T PRK08393 226 --SPVVLLDEIGFLNEDVIAAHGVWLSSRDIRILASAGVTVAHNPASNMKLGSGVMPLRKLLNAGVNVALGTDGAASNNN 303 (424)
T ss_pred --CHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHhcCCEEEECHHHHHhhccCCCCHHHHHHCCCcEEEecCCCccCCc
Confidence 4899999999999999999999999999999999999999999999888 7889999999999999999998766566
Q ss_pred CCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 339 MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.+++.+++.+....+... .....++++++++++|.|||+++|++ .|+|++||+|
T Consensus 304 ~d~~~~~~~a~~~~~~~~------~~~~~~~~~~al~~aT~~~A~~lg~~--~G~l~~G~~A 357 (424)
T PRK08393 304 LDMLREMKLAALLHKVHN------LDPTIADAETVFRMATQNGAKALGLK--AGVIKEGYLA 357 (424)
T ss_pred hhHHHHHHHHHHHHhhcc------CCCCcCCHHHHHHHHHHHHHHHhCCC--CCccCCCCcc
Confidence 789999998765543211 11223689999999999999999996 4999999987
No 17
>cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.
Probab=100.00 E-value=2.4e-45 Score=345.79 Aligned_cols=362 Identities=42% Similarity=0.665 Sum_probs=287.3
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|+++++ .+.+++++|+|+||||++|++..+.+ . ..+.++||+.|++|+|||||+|+|+.++..++....
T Consensus 1 ~~i~~~~v~~~~~-~~~~~~~~v~i~~g~I~~ig~~~~~~--~-~~~~~viD~~g~~i~PGlid~H~Hl~~~~~~~~~~~ 76 (411)
T cd01298 1 ILIRNGTIVTTDP-RRVLEDGDVLVEDGRIVAVGPALPLP--A-YPADEVIDAKGKVVMPGLVNTHTHLAMTLLRGLADD 76 (411)
T ss_pred CeEEeeEEEEeCC-cceeecceEEEECCEEEEecCccccc--c-CCcCeEEeCCCCEEccCccccccchhhHHhhcccCC
Confidence 4799999999754 45778999999999999999864421 1 125689999999999999999999988777666666
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCCHHHHHHHHHHcCCeEEEecccccCCCCCCcc
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 180 (400)
.++.+|+...+++.....+.++.+..+...+..+++.|+|++.+++........+.....|++.......+.....
T Consensus 77 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~~~---- 152 (411)
T cd01298 77 LPLMEWLKDLIWPLERLLTEEDVYLGALLALAEMIRSGTTTFADMYFFYPDAVAEAAEELGIRAVLGRGIMDLGTE---- 152 (411)
T ss_pred CCHHHHHHhhhhhhhhcCCHHHHHHHHHHHHHHHHhcCccEEECccccchHHHHHHHHHhCCeEEEEcceecCCCc----
Confidence 6789999988877666677788888888888999999999999986433245566677778888766655443211
Q ss_pred cccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCC
Q 015784 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260 (400)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~ 260 (400)
. .......+++..+.++.+...+.+.+++.++++.....+++.+.++++.|+++|+++.+|+.++....+.+.+.++.
T Consensus 153 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~~~- 230 (411)
T cd01298 153 D-VEETEEALAEAERLIREWHGAADGRIRVALAPHAPYTCSDELLREVAELAREYGVPLHIHLAETEDEVEESLEKYGK- 230 (411)
T ss_pred c-cccHHHHHHHHHHHHHHhcCCCCCceEEEEeCCCCccCCHHHHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHhCC-
Confidence 1 11233445556666666655445667887888877778999999999999999999999999887766655555543
Q ss_pred CChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCCCCC
Q 015784 261 HGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRM 339 (400)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~ 339 (400)
..++++...+.++.++++.|+.++++++++++++.|+.+++||.++..+ .+..|+++++++|+++++|||++.++...
T Consensus 231 -~~~~~~~~~~~~~~~~~i~H~~~l~~~~~~~l~~~gi~~~~~p~~~~~~~~~~~~~~~~~~~Gv~~~~GsD~~~~~~~~ 309 (411)
T cd01298 231 -RPVEYLEELGLLGPDVVLAHCVWLTDEEIELLAETGTGVAHNPASNMKLASGIAPVPEMLEAGVNVGLGTDGAASNNNL 309 (411)
T ss_pred -CHHHHHHHcCCCCCCeEEEEecCCCHHHHHHHHHcCCeEEEChHHhhhhhhCCCCHHHHHHCCCcEEEeCCCCccCCCc
Confidence 3778888888888899999999999999999999999999999998876 56789999999999999999998665567
Q ss_pred CHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 340 SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+++.+++.+....+.. ...+.+++++++|+++|.|||+++|++ ++|+|++|+.|
T Consensus 310 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~al~~~T~~~A~~lg~~-~~G~i~~G~~A 363 (411)
T cd01298 310 DMFEEMRLAALLQKLA------HGDPTALPAEEALEMATIGGAKALGLD-EIGSLEVGKKA 363 (411)
T ss_pred CHHHHHHHHHHHhccc------cCCCCcCCHHHHHHHHHhhHHHHhCCc-cCCCcCCCccC
Confidence 8999888876554321 012246999999999999999999998 68999999987
No 18
>cd01312 Met_dep_hydrolase_D Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=100.00 E-value=5.3e-45 Score=335.03 Aligned_cols=329 Identities=21% Similarity=0.276 Sum_probs=269.1
Q ss_pred CEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHH
Q 015784 48 DRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYIST 127 (400)
Q Consensus 48 g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (400)
|+|++||+..++...++ +.+++|+.|++|+|||||+|+|+.++.+++...+.++.+|+...+ +....+++++.+..+
T Consensus 1 ~~I~aVG~~~~~~~~~~--~~~v~d~~g~~v~PGlVnaH~H~~~~~~rg~~~~~~~~~wl~~~~-~~~~~~~~e~~~~~a 77 (381)
T cd01312 1 DKILEVGDYEKLEKRYP--GAKHEFFPNGVLLPGLINAHTHLEFSANVAQFTYGRFRAWLLSVI-NSRDELLKQPWEEAI 77 (381)
T ss_pred CeEEEECChHHHHhhcC--CCeEEecCCcEEecCccccccccchhccccccCCCchHHHHHHHH-HHHHhcChHHHHHHH
Confidence 69999998766544333 468999999999999999999999999988777788999997654 445567888889999
Q ss_pred HHHHHHHHhcCcceeeccCcCCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCC
Q 015784 128 LLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGR 207 (400)
Q Consensus 128 ~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (400)
+..+.+++++|+||+.|++. ... ..+++.+.|+|.+++...++..+ .. .........+.+..+....++.
T Consensus 78 ~~~~~E~l~~G~Tt~~d~~~-~~~-~~~a~~~~GiR~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~ 147 (381)
T cd01312 78 RQGIRQMLESGTTSIGAISS-DGS-LLPALASSGLRGVFFNEVIGSNP---SA-----IDFKGETFLERFKRSKSFESQL 147 (381)
T ss_pred HHHHHHHHHhCCeEEEEecC-CHH-HHHHHHHcCCcEEEEEeeECCCC---ch-----hhhhHHHHHHHHHHhhccCccc
Confidence 99999999999999999873 333 77888899999998877664321 11 1111122222233332223467
Q ss_pred eEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcC----------------CCCChHHHHhHhC
Q 015784 208 IRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK----------------VDHGTVTFLDKIE 271 (400)
Q Consensus 208 ~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~~ 271 (400)
++..++++.++..+++.++.+.++|+++++++++|+.|+..+.+.+.+.++ .+.++++++.+.|
T Consensus 148 v~~~~~p~a~~~~s~e~l~~~~~lA~~~g~~i~~Hl~E~~~e~~~~~~~~g~~~~~~~~~~~~~~~~~g~~pv~~l~~~g 227 (381)
T cd01312 148 FIPAISPHAPYSVHPELAQDLIDLAKKLNLPLSTHFLESKEEREWLEESKGWFKHFWESFLKLPKPKKLATAIDFLDMLG 227 (381)
T ss_pred eEEEECCCCCcccCHHHHHHHHHHHHHcCCeEEEEecCcHHHHHHHHHhccchhhHhhhhcccccccCCCCHHHHHHHcC
Confidence 888899999999999999999999999999999999999988776654431 1456899999999
Q ss_pred CCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHH
Q 015784 272 FLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASL 350 (400)
Q Consensus 272 ~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~ 350 (400)
+++++.++.|+.++++++++++++.|+.+++||.+|+++ .+..|+++|+++|+++++|||++.+++..+++.+|+.+..
T Consensus 228 ~L~~~~~~~H~~~l~~~~~~~l~~~g~~v~~~P~sn~~lg~g~~p~~~~~~~Gv~v~lGtD~~~~~~~~d~~~~~~~~~~ 307 (381)
T cd01312 228 GLGTRVSFVHCVYANLEEAEILASRGASIALCPRSNRLLNGGKLDVSELKKAGIPVSLGTDGLSSNISLSLLDELRALLD 307 (381)
T ss_pred CCCCCcEEEECCcCCHHHHHHHHHcCCeEEECcchhhhhcCCCcCHHHHHHCCCcEEEeCCCCccCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999887 7889999999999999999998877677899999999876
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
..+.. ...++++++|+++|.|+|++||++ .|+|++||+|
T Consensus 308 ~~~~~---------~~~~~~~~~l~~aT~~gA~alg~~--~Gsle~Gk~A 346 (381)
T cd01312 308 LHPEE---------DLLELASELLLMATLGGARALGLN--NGEIEAGKRA 346 (381)
T ss_pred hcccc---------cccCCHHHHHHHHHHHHHHHhCCC--CCccCCCCcc
Confidence 65422 113678999999999999999996 7999999987
No 19
>COG0402 SsnA Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]
Probab=100.00 E-value=7.2e-45 Score=340.20 Aligned_cols=361 Identities=33% Similarity=0.539 Sum_probs=303.9
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
..++|+|..++..++... ++.+++.|+||+|+.|++..+.+ .+.++||++|++|+|||||+|+|+.++..++..
T Consensus 2 ~~~~i~~~~~~~~d~~~~-~~~~~~~i~~g~I~~ig~~~~~~-----~~~~~iD~~~~lv~Pgfvn~H~H~~~t~~~g~~ 75 (421)
T COG0402 2 TMLLIRGDLLLTNDPEGR-IEDGDLVIEDGKIVAIGANAEGP-----PDEEVIDAKGKLVLPGFVNAHTHLDQTLLRGLA 75 (421)
T ss_pred cceeeeCcEEeecCcccc-eeeeeEEEcCCEEEEeCCcCCCC-----CCceeecCCCCEeccCccccccchHHHHHhhhh
Confidence 357899999998654433 56789999999999999976531 357899999999999999999999999999998
Q ss_pred CCCChhHhhhhccccccCC-CChhhHHHHHHHHHHHHHhcCcceeeccCcCC---HHHHHHHHHHcCCeEEEecccccCC
Q 015784 99 DDVDLMTWLHDRIWPYESN-MTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVELLGLRACLVQSTMDCG 174 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~ 174 (400)
...++..|+...+|+.... .++++.+..+...+..++++|+|++..+.... .....+++.+.|++...+..+++.+
T Consensus 76 ~~~~l~~wl~~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~t~~~~~~~~~~~~~~~~~~a~~~~g~r~~~~~~~~~~~ 155 (421)
T COG0402 76 DDLPLLEWLERYVWPREARLLTEEDLYARALLALLEMLRNGTTTARTHVDVVAESADAAFEAALEVGLRAVLGPVLQDVA 155 (421)
T ss_pred cccchHHHHHHHHhHHHhhcCCHHHHHHHHHHHHHHHHhcCccccccccchhhhhHHHHHHHHHHhCCeeEeeeccccCC
Confidence 8888999999999988877 67778899999999999999999977655322 2346789999999999998888765
Q ss_pred CCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHh
Q 015784 175 EGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 254 (400)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~ 254 (400)
++......... ++...++++++...+ .+.+...++..+..+++.++.+.++++++|+++++|+.|+..+.+...
T Consensus 156 --~p~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~v~iH~~E~~~e~~~~~ 229 (421)
T COG0402 156 --FPDPGAETDEE--LEETEELLREAHGLG--RDVVGLAPHFPYTVSPELLESLDELARKYGLPVHIHLAETLDEVERVL 229 (421)
T ss_pred --CCcccccchHH--HHHHHHHHHHHhcCC--CeeEEEecCCCCCCCHHHHHHHHHHHhcCCCceEEEecCcHHHHHHHH
Confidence 33333222222 566778888888764 677778999999999999999999999999999999999999999888
Q ss_pred hhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCC
Q 015784 255 DTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGA 333 (400)
Q Consensus 255 ~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~ 333 (400)
+.++. .+++++...+.++.+.++.|+.++++++++.+++.|+.+++||.+|+++ .+..|++++++.|+++++|||+.
T Consensus 230 ~~~g~--~~~~~~~~~g~l~~~~~~~H~~~~~~~e~~~l~~~g~~v~~cP~sN~~L~sG~~p~~~~~~~gv~v~~gTD~~ 307 (421)
T COG0402 230 EPYGA--RPVERLDLLGLLGSHTLLAHCVHLSEEELELLAESGASVVHCPRSNLKLGSGIAPVRRLLERGVNVALGTDGA 307 (421)
T ss_pred hhcCC--CHHHHHHHcCCCCCCeEEEEeccCCHHHHHHHhhCCCeEEECcchhccccCCCCCHHHHHHcCCCEEEecCCc
Confidence 75554 4999999999999999999999999999999999999999999999999 78999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 334 PSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.+++.+++|++|+.+..+.+..... ....... ++|+++|.|+|++||+ ++.|+|++|+.|
T Consensus 308 ~~~~~~d~l~~~~~a~~l~~~~~~~-----~~~~~~~-~~l~~aT~~gA~alg~-~~~G~le~G~~A 367 (421)
T COG0402 308 ASNNVLDMLREMRTADLLQKLAGGL-----LAAQLPG-EALDMATLGGAKALGL-DDIGSLEVGKKA 367 (421)
T ss_pred cccChHHHHHHHHHHHHHHHhhcCC-----CcccchH-HHHHHHHhhHHHHcCC-cccCCccccccc
Confidence 8877799999999998888754211 1112222 4999999999999999 568999999987
No 20
>cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=100.00 E-value=9.4e-45 Score=338.81 Aligned_cols=345 Identities=21% Similarity=0.272 Sum_probs=271.3
Q ss_pred ceeeceeE-EEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC-----CCChhHhhhh
Q 015784 36 RVFRNGGV-FVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD-----DVDLMTWLHD 109 (400)
Q Consensus 36 ~~~~~~~i-~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~-----~~~~~~~~~~ 109 (400)
++.++++| +|+||+|++||+... .++||+.|++|||||||+|+|+.++.+++... +.++.+|+.
T Consensus 6 ~~~~~~~i~~v~~g~I~~Vg~~~~---------~~~iD~~g~lv~PGfVn~H~Hl~~~~~rg~~~~~~~~~~~l~~w~~- 75 (418)
T cd01313 6 GWERNVRIEVDADGRIAAVNPDTA---------TEAVALLGGALLPGMPNLHSHAFQRAMAGLTEYRGSAADSFWTWRE- 75 (418)
T ss_pred ceecCeEEEEeCCCeEEEecCCCC---------CcccccCCCeeccCccccCccHHHHHhcccccccCCCCCChhhHHH-
Confidence 46688999 999999999998532 25699999999999999999999999988764 457778985
Q ss_pred ccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc--------------CCHHHHHHHHHHcCCeEEEecccccCCC
Q 015784 110 RIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------------QHVSEMAKAVELLGLRACLVQSTMDCGE 175 (400)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~--------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 175 (400)
..++....+++++.+..++..+.+++++|+|++.++.. ...+...+++.+.|+|..++...+....
T Consensus 76 ~~~~~~~~~t~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~GiR~~~~~~~~~~~~ 155 (418)
T cd01313 76 LMYRFAARLTPEQIEAIARQLYIEMLLAGITAVGEFHYVHHDPDGTPYADPAELAQRVIAAASDAGIGITLLPVLYARAG 155 (418)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHhCCCEEEEeeeeccCCCCCccCChhhhHHHHHHHHHHhCCeEEeeeeEEeccC
Confidence 45666778999999999999999999999999998631 1135678889999999988776665431
Q ss_pred CCCcc-ccc-----CCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchh
Q 015784 176 GLPAS-WAV-----RTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (400)
Q Consensus 176 ~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~ 249 (400)
..... ... ......++...+.+..+.. .+.+...+.++.....+++.++.+.+.|++ |+++++|+.|+..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~s~e~l~~~~~~a~~-g~~i~~H~~e~~~e 232 (418)
T cd01313 156 FGGPAPNPGQRRFINGYEDFLGLLEKALRAVKE--HAAARIGVAPHSLRAVPAEQLAALAALASE-KAPVHIHLAEQPKE 232 (418)
T ss_pred CCCCCCchhhhhhcccHHHHHHHHHHHhhhhcc--CCceEEEEccCCCCCCCHHHHHHHHHHHhc-CCceEEEeCCCHHH
Confidence 11111 000 0111222222222223322 356777788888889999999999999999 99999999988877
Q ss_pred hhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEE
Q 015784 250 NQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSL 328 (400)
Q Consensus 250 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~ 328 (400)
.....+.++. .+++++.+.+.++.+.++.|+.++++++++++++.|+.+++||.+|+++ .+.+|+++|+++|+++++
T Consensus 233 ~~~~~~~~g~--~~i~~l~~~g~l~~~~~~~H~~~l~~~~~~~la~~g~~v~~~P~sn~~lg~g~~p~~~l~~~Gv~v~l 310 (418)
T cd01313 233 VDDCLAAHGR--RPVELLLDHGHLDARWCLVHATHLTDNETLLLGRSGAVVGLCPTTEANLGDGIFPAAALLAAGGRIGI 310 (418)
T ss_pred HHHHHHHcCC--CHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHcCCEEEECCCchhhccCCCCCHHHHHHCCCcEEE
Confidence 7766666654 4899999999999999999999999999999999999999999999988 889999999999999999
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 329 GTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 329 gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
|||++. ..+++.+|+.+..+.+..............++++++|+++|.|+|++||++ +|+|++||.|
T Consensus 311 GtD~~~---~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~gA~alg~~--~Gsle~Gk~A 377 (418)
T cd01313 311 GSDSNA---RIDLLEELRQLEYSQRLRDRARNVLATAGGSSARALLDAALAGGAQALGLA--TGALEAGARA 377 (418)
T ss_pred ecCCCC---CcCHHHHHHHHHHHHHHHhcccccccccCCCCHHHHHHHHHHHHHHHhCCC--CCeECCCCcc
Confidence 999753 367999999877665432111011112346999999999999999999997 7999999987
No 21
>PRK06151 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=3.2e-44 Score=341.46 Aligned_cols=360 Identities=23% Similarity=0.344 Sum_probs=279.2
Q ss_pred cEEEEecEEEeecCCC-ceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 20 TMILHNAVIVTMDKES-RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~-~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
+++|+|++|++.++.. .++++++|+|+||+|++||+... ..+.++||+.|++|||||||+|+|+.........
T Consensus 2 ~~li~~~~v~~~d~~~~~~~~~~~VlVe~g~I~~Vg~~~~------~~~~~viD~~g~~vlPGlVdaH~Hl~~~~~~~~~ 75 (488)
T PRK06151 2 RTLIKARWVLGFDDGDHRLLRDGEVVFEGDRILFVGHRFD------GEVDRVIDAGNALVGPGFIDLDALSDLDTTILGL 75 (488)
T ss_pred eEEEEccEEEEEcCCCCeEEeCcEEEEECCEEEEecCCCC------CCCCeEEeCCCCEEecCEEeeecccchhhhhccc
Confidence 6899999998877643 47899999999999999998432 1235899999999999999999998643222111
Q ss_pred CCCChhHhhhhccccc-------cCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC----------CHHHHHHHHHHcC
Q 015784 99 DDVDLMTWLHDRIWPY-------ESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----------HVSEMAKAVELLG 161 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~----------~~~~~~~~~~~~g 161 (400)
.+...|+....|+. ...+++++.+..++..+.+++++|+|++.|++.. ......+.+...|
T Consensus 76 --~~~~~~~~~~~~~~~~~~~~~~~~~t~e~~~~~a~~~~~e~L~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~a~~~~G 153 (488)
T PRK06151 76 --DNGPGWAKGRVWSRDYVEAGRREMYTPEELAFQKRYAFAQLLRNGITTAMPIASLFYRQWAETYAEFAAAAEAAGRLG 153 (488)
T ss_pred --ccchhHHhcccCchhhhhcchhhcCCHHHHHHHHHHHHHHHHhcCeeEEehhhhhhccccccccchHHHHHHHHHHcC
Confidence 11225555544442 1357888999999999999999999999986421 2455677888899
Q ss_pred CeEEEecccccCCCCCC------cccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHc
Q 015784 162 LRACLVQSTMDCGEGLP------ASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 235 (400)
Q Consensus 162 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~ 235 (400)
+|...++..+..+.... +.+........+....++++++...+.+.++.+..++.....+++.+.++++.|+++
T Consensus 154 iR~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~i~~~~~p~~~~~~s~e~l~~~~~~A~~~ 233 (488)
T PRK06151 154 LRVYLGPAYRSGGSVLEADGSLEVVFDEARGLAGLEEAIAFIKRVDGAHNGLVRGMLAPDRIETCTVDLLRRTAAAAREL 233 (488)
T ss_pred CeEEecchhccCccccccCCCCCccccchhHHHHHHHHHHHHHHhhcccCCceEEEEcCCCCCCCCHHHHHHHHHHHHHC
Confidence 99988765543221111 111111223345566677777766666678888888888889999999999999999
Q ss_pred CCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCCh---------hHHHHHHhcCCeEEECccc
Q 015784 236 KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH---------TEIGLLSRAGVKVSHCPAS 306 (400)
Q Consensus 236 ~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~---------~~i~~~~~~~~~~~~~p~~ 306 (400)
|+++++|+.++..+.+.+.+.++. .+++++.+.+.++.+.+++|+.++++ ++++++++.|+.+++||.+
T Consensus 234 g~~v~~H~~e~~~~~~~~~~~~g~--~~~~~~~~~g~l~~r~~l~H~~~l~~~~~~~~~~~~~~~~la~~g~~v~~~P~~ 311 (488)
T PRK06151 234 GCPVRLHCAQGVLEVETVRRLHGT--TPLEWLADVGLLGPRLLIPHATYISGSPRLNYSGGDDLALLAEHGVSIVHCPLV 311 (488)
T ss_pred CCcEEEEECCchHHHHHHHHHcCC--CHHHHHHHcCCCCCCcEEEEEEEcCCccccccCCHHHHHHHHhcCCEEEECchh
Confidence 999999999888777777666554 48899999999999999999999999 9999999999999999998
Q ss_pred cccc-cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 015784 307 AMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385 (400)
Q Consensus 307 ~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~l 385 (400)
+.++ .+..|+++|+++|+++++|||+.+ .+++.+++.+....+... .....++++++|+++|.|||+++
T Consensus 312 ~~~~g~~~~p~~~l~~~Gv~v~lGtD~~~----~~~~~~~~~~~~~~~~~~------~~~~~~~~~~al~~aT~~~A~~l 381 (488)
T PRK06151 312 SARHGSALNSFDRYREAGINLALGTDTFP----PDMVMNMRVGLILGRVVE------GDLDAASAADLFDAATLGGARAL 381 (488)
T ss_pred hhhhccccccHHHHHHCCCcEEEECCCCC----ccHHHHHHHHHHHHHHhc------CCCCCCCHHHHHHHHHHHHHHHh
Confidence 8877 788999999999999999999743 468888888765543210 11234899999999999999999
Q ss_pred CCCCCccccccCcCC
Q 015784 386 LWDNDIGSLEAGKKV 400 (400)
Q Consensus 386 g~~~~~G~i~~G~~A 400 (400)
|+++ +|+|++|+.|
T Consensus 382 g~~~-~G~I~~G~~A 395 (488)
T PRK06151 382 GRDD-LGRLAPGAKA 395 (488)
T ss_pred CCCC-CcccCCCCcC
Confidence 9987 6999999987
No 22
>PRK09229 N-formimino-L-glutamate deiminase; Validated
Probab=100.00 E-value=9e-44 Score=336.20 Aligned_cols=356 Identities=19% Similarity=0.224 Sum_probs=275.3
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeC-CEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQ-DRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~-g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
+++++++.+. ++ ++++++|+|+| |+|++||+... . +.++..|++|||||||+|+|+.++.+++..
T Consensus 4 ~~~~~~~~~~--~~---~~~~~~v~i~~~grI~~vg~~~~------~---~~~~~~g~~vlPGlVn~H~H~~~~~~rg~~ 69 (456)
T PRK09229 4 TLFAERALLP--DG---WARNVRLTVDADGRIAAVEPGAA------P---AGAERLAGPVLPGMPNLHSHAFQRAMAGLT 69 (456)
T ss_pred hHHHHHhhCC--Cc---cccCcEEEEecCCeEEEecCCCC------C---ccccccCcEEccCcccccccHhhHhhcCcc
Confidence 4556666663 33 56888999999 99999998532 1 123568999999999999999999999876
Q ss_pred CC-----CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc--------------CCHHHHHHHHHH
Q 015784 99 DD-----VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------------QHVSEMAKAVEL 159 (400)
Q Consensus 99 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~--------------~~~~~~~~~~~~ 159 (400)
.+ .++.+|+. .+|+....+++++.+..++..+.+++++|+||+.++.. ...+...+++.+
T Consensus 70 ~~~~~~~~~l~~w~~-~~~~~~~~~~~e~~~~~a~~~~~e~L~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~e 148 (456)
T PRK09229 70 EVRGPPQDSFWSWRE-LMYRFALRLTPDQLEAIARQLYVEMLEAGYTSVGEFHYLHHDPDGTPYADPAEMALRIVAAARA 148 (456)
T ss_pred cccCCCCCChHHHHH-HHHHHHHhCCHHHHHHHHHHHHHHHHhhCCcEEEeeeeeccCCCCCccCChHHHHHHHHHHHHH
Confidence 53 56678875 45777677899999999999999999999999998641 113667888999
Q ss_pred cCCeEEEecccccCCCC--CCccc----ccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHH
Q 015784 160 LGLRACLVQSTMDCGEG--LPASW----AVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAR 233 (400)
Q Consensus 160 ~g~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~ 233 (400)
.|+|..+++..+..... .++.. ............+++.+.+.. .+.+.+.++++..+..+++.++++++.|
T Consensus 149 ~GiR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~s~e~l~~~~~~A- 225 (456)
T PRK09229 149 AGIGLTLLPVLYAHSGFGGQPPNPGQRRFINDPDGFLRLLEALRRALAA--LPGARLGLAPHSLRAVTPDQLAAVLALA- 225 (456)
T ss_pred cCCEEEeceeeeecCCCCCCCCchhhcccccCHHHHHHHHHHHHHhhcC--CCceEEEEeCCCCCCCCHHHHHHHHHHh-
Confidence 99999888766654211 11110 001112222222333333332 3568888889988999999999999999
Q ss_pred HcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cC
Q 015784 234 EFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LG 312 (400)
Q Consensus 234 ~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~ 312 (400)
++|+++++|+.|+..+.....+.++. .+++++.+.+.++.++++.|+.++++++++++++.|+.+++||.+|+++ .+
T Consensus 226 ~~g~~i~~H~~e~~~e~~~~~~~~g~--~~~~~l~~~g~l~~~~~l~H~~~l~~~d~~~la~~g~~v~~~P~sn~~lg~g 303 (456)
T PRK09229 226 APDGPVHIHIAEQTKEVDDCLAWSGA--RPVEWLLDHAPVDARWCLVHATHLTDAETARLARSGAVAGLCPTTEANLGDG 303 (456)
T ss_pred cCCCceEEEeCCCHHHHHHHHHHcCC--CHHHHHHHcCCCCCCeEEEeeccCCHHHHHHHHHcCCeEEECchhhhhhcCC
Confidence 99999999999988777777776664 4889999999999999999999999999999999999999999999887 88
Q ss_pred cccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCC-CCCCCCHHHHHHHHhHHHHHHcCCCCCc
Q 015784 313 FAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTT-DPAALPAETVLRMATINGAKSVLWDNDI 391 (400)
Q Consensus 313 ~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~al~~~T~~~A~~lg~~~~~ 391 (400)
..|+++|+++|+++++|||++. ..+++.+|+.+....+.......... ..+.++++++|+++|.|+|+++|+ + +
T Consensus 304 ~~p~~~l~~~Gv~v~lGtD~~~---~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~alg~-~-~ 378 (456)
T PRK09229 304 IFPAVDYLAAGGRFGIGSDSHV---SIDLVEELRLLEYGQRLRDRRRNVLAAAAQPSVGRRLFDAALAGGAQALGR-A-I 378 (456)
T ss_pred CCCHHHHHHCCCeEEEecCCCC---CCCHHHHHHHHHHHHHHhhcCCcccccccccchHHHHHHHHHHHHHHHhCC-C-c
Confidence 9999999999999999999753 36899999998766543211111111 114678999999999999999999 3 7
Q ss_pred cccccCcCC
Q 015784 392 GSLEAGKKV 400 (400)
Q Consensus 392 G~i~~G~~A 400 (400)
|+|++||+|
T Consensus 379 GsLe~Gk~A 387 (456)
T PRK09229 379 GGLAVGARA 387 (456)
T ss_pred CCcCCCCcc
Confidence 999999987
No 23
>TIGR02022 hutF formiminoglutamate deiminase. In some species, histidine utilization goes via urocanate to glutamate in four step, the last being removal of formamide. This model describes an alternate fourth step, formiminoglutamate hydrolase, which leads to N-formyl-L-glutamate. This product may be acted on by formylglutamate amidohydrolase (TIGR02017) and bypass glutamate as a product during its degradation. Alternatively, removal of formate (by EC 3.5.1.68) would yield glutamate.
Probab=100.00 E-value=3.2e-43 Score=331.45 Aligned_cols=356 Identities=19% Similarity=0.231 Sum_probs=273.7
Q ss_pred EEEEecEEEeecCCCceeeceeEEEe-CCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVV-QDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~-~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+.++|+++- ++ +.++.+|+|+ ||+|++||+.... ... .+..|++|||||||+|+|+.++.+++...
T Consensus 4 ~~~~~~~~~--~~---~~~~~~i~I~~~g~I~~vg~~~~~-----~~~---~~~~g~lvlPGfVn~H~H~~~~~~rg~~~ 70 (455)
T TIGR02022 4 YWAERALLP--DG---WAEGVRIAVAADGRILAIETGVPA-----APG---AERLSGPLLPGLANLHSHAFQRAMAGLAE 70 (455)
T ss_pred hhHHhccCC--Cc---cccCceEEEecCCEEEEecCCCCc-----ccc---cccCCCEEccCCcccCcchhhHhhcCCcc
Confidence 457777773 32 4577899999 9999999985431 112 23458999999999999999999998754
Q ss_pred -----CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc--------------CCHHHHHHHHHHc
Q 015784 100 -----DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------------QHVSEMAKAVELL 160 (400)
Q Consensus 100 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~--------------~~~~~~~~~~~~~ 160 (400)
+.++.+|+. .+|+....+++++.+..++..+.+++++|+||+.++.. ...+...+++.+.
T Consensus 71 ~~~~~~~~l~~w~~-~~~~~~~~~t~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~e~ 149 (455)
T TIGR02022 71 VAGSGGDSFWTWRE-LMYRFVDRLTPEQLQAIARQLYVEMLEAGFTRVGEFHYLHHAPDGTPYADPAEMAERIAAAAADA 149 (455)
T ss_pred cccCCCCCHHHHHH-HHHHHHHhCCHHHHHHHHHHHHHHHHHhCCCEEEeeeeecccCCCccccchhhhHHHHHHHHHHh
Confidence 247788976 56777778999999999999999999999999998531 1245778889999
Q ss_pred CCeEEEecccccCCC--CCCccc----ccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHH
Q 015784 161 GLRACLVQSTMDCGE--GLPASW----AVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMARE 234 (400)
Q Consensus 161 g~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~ 234 (400)
|+|..+++.++.... +.++.. ..............+.+.+.. .+.+...+.++..+.++++.++++.+ +++
T Consensus 150 G~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~s~e~l~~~~~-a~~ 226 (455)
T TIGR02022 150 GIGLTLLPVFYAHSGFGGAAPNPGQRRFIHDVERFARLVEVLRRELAA--QPAAVLGLAPHSLRAVTPEQLAAVLQ-ASD 226 (455)
T ss_pred CCeEEeeeeeeecCCCCCCCCcccchhhccCHHHHHHHHHHHHHHhcc--CCceEEEEecCCCCcCCHHHHHHHHH-HHh
Confidence 999988776654321 012110 001112222222333333322 24577778888888999999999999 889
Q ss_pred cCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCc
Q 015784 235 FKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGF 313 (400)
Q Consensus 235 ~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~ 313 (400)
+|+++++|+.|+..+.+...+.++. .+++++...|+++.+.++.|+.++++++++++++.|+.+++||.+|+++ .+.
T Consensus 227 ~g~~v~~H~~e~~~e~~~~~~~~G~--~~v~~l~~~g~l~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~lg~g~ 304 (455)
T TIGR02022 227 RQAPVHIHVAEQQKEVDDCLAWSGR--RPVEWLLDHGPVDARWCLVHATHLTDEETALLARSGAVAGLCPTTEANLGDGI 304 (455)
T ss_pred CCCceEEEECCChHHHHHHHHHhCC--CHHHHHHHcCCCCCCEEEEEeecCCHHHHHHHHHcCCeEEEChhhhccccCCC
Confidence 9999999999998888777776664 4899999999999999999999999999999999999999999999988 889
Q ss_pred ccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCC-CCCCCCCCHHHHHHHHhHHHHHHcCCCCCcc
Q 015784 314 APIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANG-TTDPAALPAETVLRMATINGAKSVLWDNDIG 392 (400)
Q Consensus 314 ~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G 392 (400)
+|+++|+++|+++++|||+.. ..+++.+|+.+....+........ ...+..++.+++|+|+|.|+|++||++ +|
T Consensus 305 ~pi~~l~~~Gv~v~lGTD~~~---~~d~~~~m~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gAralg~~--~G 379 (455)
T TIGR02022 305 FPAVDFVAAGGRFGIGSDSHV---VIDVAEELRQLEYGQRLRDRARNVLAAGPGPSVGRALYDAALLGGAQALGLA--TG 379 (455)
T ss_pred CCHHHHHHCCCeEEEECCCCC---CCCHHHHHHHHHHHHHHHhcccccccCCcccchHHHHHHHHHHHHHHHhCCC--CC
Confidence 999999999999999999753 468999999987765532100000 011234778999999999999999993 79
Q ss_pred ccccCcCC
Q 015784 393 SLEAGKKV 400 (400)
Q Consensus 393 ~i~~G~~A 400 (400)
+|++||+|
T Consensus 380 sLe~Gk~A 387 (455)
T TIGR02022 380 GLRAGARA 387 (455)
T ss_pred ccCCCCCc
Confidence 99999987
No 24
>KOG3968 consensus Atrazine chlorohydrolase/guanine deaminase [Nucleotide transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.7e-43 Score=305.00 Aligned_cols=358 Identities=27% Similarity=0.361 Sum_probs=297.1
Q ss_pred CCceeeceeEEEeC-CEEEEecCChhhhhhhc-----cCCCcEEeCCCcEeeecccccCcC-CcccccccccCCCChhHh
Q 015784 34 ESRVFRNGGVFVVQ-DRIKAIGQSADILQQFS-----QMADQIIDLQSQILLPGFVNTHVH-TSQQLAKGIADDVDLMTW 106 (400)
Q Consensus 34 ~~~~~~~~~i~v~~-g~I~~vg~~~~~~~~~~-----~~~~~viD~~g~~v~PG~iD~H~H-~~~~~~~~~~~~~~~~~~ 106 (400)
+..+.++..+.|.| |+|+.|++....+..+. .+..++++..|.++||||||.|+| ..+.+..+.+.+.++.+|
T Consensus 21 ~l~i~e~~sl~Vd~~GKi~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~mPGfVdtH~H~a~q~~~s~~g~d~pll~w 100 (439)
T KOG3968|consen 21 ELEILEGSSLGVDDTGKIVFIGKAYFDENKLKGEGVEKENTKIKLSSGHFLMPGFVDTHIHPAHQFAMSGAGTDMPLLQW 100 (439)
T ss_pred ceEEecCcceeecCCccEEEeeccccchhhhcccccccccceeeecCCcEEecceeecccchHhhhhhhccccCcHHHHH
Confidence 45577888889987 99999998654332111 124588999999999999999999 556666666678899999
Q ss_pred hhhccccccCCCCh-hhHHHHHHHHHHHHHhcCcceeeccCcCCH---HHHHHHHHHcCCeEEEecccccCCCCCCcccc
Q 015784 107 LHDRIWPYESNMTE-EDSYISTLLCGIELIHSGVTCFAEAGGQHV---SEMAKAVELLGLRACLVQSTMDCGEGLPASWA 182 (400)
Q Consensus 107 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 182 (400)
+.++.|+....++. ++.+......++.++++|+|++..+.+.+. ..+++.+...|.|..++..+++++. ++++++
T Consensus 101 l~~~~f~le~~~~~~e~~~q~~~~vv~~mL~~GTTt~~~f~~~~~~s~~ll~~~~~~~G~R~~igkv~m~~~~-~~~p~~ 179 (439)
T KOG3968|consen 101 LGKYTFPLEATFTNEEDARQVYQRVVKEMLRAGTTTVEYFSTLHLDSELLLARAAIRAGQRALIGKVCMDCNA-HAVPKG 179 (439)
T ss_pred hhcceeecchhhhhHHHHHHHHHHHHHHHHHcCceehhhhhccCchhHHHHHHHHHHhCCceeeeeehhccCC-CCCCcc
Confidence 99999999998888 555555556789999999999998775443 4568899999999999999999874 355555
Q ss_pred cCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCC
Q 015784 183 VRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHG 262 (400)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~ 262 (400)
....+..+....+++....+...+.+.....++.....+.+.+.+..++++..++++.+|..+...+++++...++...+
T Consensus 180 ~~~~E~si~~t~~~i~~~~~~~~~~~~~~vt~~fa~~c~k~v~~~l~~lak~~~l~~q~hIsen~~EI~~~~~ff~~~~~ 259 (439)
T KOG3968|consen 180 VETTEESIESTEDLIPKLEKLKREKVNPIVTPRFAASCSKGVFEELSKLAKYHNLHIQIHISENGKEIEAVKNFFPEKLS 259 (439)
T ss_pred chhHHHHHHHHHHHHHHHHhhccCCCCCcccccccCCCcchhHHHHHHHHHhhhhhhhhhhhhcHHHHHHHHHhhhhccc
Confidence 56677778888888877777666665555566667788888999999999999999999999999999999999999888
Q ss_pred hHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCCCCCCH
Q 015784 263 TVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSI 341 (400)
Q Consensus 263 ~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~ 341 (400)
+...+...+.++...++.|+.+++.++++.++++|..+++||.+|..+ .+++++++|++.||.|++|||..+ .++
T Consensus 260 y~~~yd~~~lL~~ktvlaH~~hl~d~ei~~l~k~g~svshCP~Sn~~L~sG~~~vr~lL~~~v~VgLGtDv~~----~s~ 335 (439)
T KOG3968|consen 260 YTDVYDKGGLLTEKTVLAHLEHLSDEEIELLAKRGCSVSHCPTSNSILGSGIPRVRELLDIGVIVGLGTDVSG----CSI 335 (439)
T ss_pred chHHHHHhcccchHhHhhhheecCchhHHHHHhcCCceEECCcchhhhccCCccHHHHHhcCceEeecCCccc----ccc
Confidence 999999999999999999999999999999999999999999999998 999999999999999999999764 346
Q ss_pred HHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 342 VDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
..+++.+..+.+...-. .+..++|++|+|.+||.|+|++||+++..|+|++||.+
T Consensus 336 l~a~r~A~~~s~hL~~~----~~~~~Ls~~e~L~lATi~GA~aLg~d~~~Gs~eVGK~f 390 (439)
T KOG3968|consen 336 LNALRQAMPMSMHLACV----LDVMKLSMEEALYLATIGGAKALGRDDTHGSLEVGKYF 390 (439)
T ss_pred HHHHHHHHHHHHHHHhc----cCcccCCHHHHHHHHhccchhhccCCCcccceeccccc
Confidence 67777766555432111 14567999999999999999999999999999999975
No 25
>PRK07213 chlorohydrolase; Provisional
Probab=100.00 E-value=1.4e-41 Score=313.33 Aligned_cols=329 Identities=20% Similarity=0.302 Sum_probs=254.9
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|++++. ..+.+++|+|++|+|++|++.. .+.++||++|++| |||||+|+|+..+..++...+
T Consensus 2 ~li~~~~v~~~~~--~~~~~~~v~i~~g~I~~i~~~~--------~~~~~id~~g~~v-PGlvd~H~H~~~~~~rg~~~~ 70 (375)
T PRK07213 2 LVYLNGNFLYGED--FEPKKGNLVIEDGIIKGFTNEV--------HEGNVIDAKGLVI-PPLINAHTHIGDSSIKDIGIG 70 (375)
T ss_pred EEEEeeEEEeCCC--CceeeeEEEEECCEEEEeccCC--------CCCeEEeCCCCEe-cceeeeccccCchhhhcCCCC
Confidence 6899999998542 2456788999999999998741 1458999999999 999999999999888888877
Q ss_pred CChhHhhhh---ccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC---HHHHHHHHHHcCCeEEEecccccCC
Q 015784 101 VDLMTWLHD---RIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVELLGLRACLVQSTMDCG 174 (400)
Q Consensus 101 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~ 174 (400)
.++.+|+.. ..+.....+++++.+..++..+.++++.|+|++.|+.... .+...+.....+++..+. ..
T Consensus 71 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~~~~~~~~~~~~~a~~~~~~r~~~~----~~- 145 (375)
T PRK07213 71 KSLDELVKPPNGLKHKFLNSCSDKELVEGMKEGLYDMYNNGIKAFCDFREGGIKGINLLKKASSDLPIKPIIL----GR- 145 (375)
T ss_pred CCHHHHccCCCcchHHHHhcCCHHHHHHHHHHHHHHHHHcCCeEEEEhhhcChhHHHHHHHHHHcCCCceEEe----cC-
Confidence 788888642 1122235678889999999999999999999999964222 334455666667765421 00
Q ss_pred CCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHh
Q 015784 175 EGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 254 (400)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~ 254 (400)
+... ......+...+.++ ...+ ++++....++++.++.+++.|+++|+++++|+.|+..+.....
T Consensus 146 ---~~~~---~~~~~~~~~~~~~~----~~~g-----~~~~~~~~~s~~~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~ 210 (375)
T PRK07213 146 ---PTEA---DENELKKEIREILK----NSDG-----IGLSGANEYSDEELKFICKECKREKKIFSIHAAEHKGSVEYSL 210 (375)
T ss_pred ---CCcc---cchhhHHHHHHHHH----hccc-----ccccccccCCHHHHHHHHHHHHHcCCEEEEeeCCchhHHHHHH
Confidence 0000 01111111222222 1111 3455556778999999999999999999999999998877777
Q ss_pred hhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCC
Q 015784 255 DTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGA 333 (400)
Q Consensus 255 ~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~ 333 (400)
+.++. .+++.+.+.|+. ++ .+.|+.++++++++++++.|+.+++||.+|+++ .+.+|+++|+++||++++|||+.
T Consensus 211 ~~~G~--~~v~~~~~~G~~-~~-~i~H~~~~~~~~i~~la~~g~~v~~~P~sn~~l~~g~~~v~~l~~~Gv~v~lGTD~~ 286 (375)
T PRK07213 211 EKYGM--TEIERLINLGFK-PD-FIVHATHPSNDDLELLKENNIPVVVCPRANASFNVGLPPLNEMLEKGILLGIGTDNF 286 (375)
T ss_pred HHcCC--ChHHHHHhcCCC-CC-EEEECCCCCHHHHHHHHHcCCcEEECCcchhhhccCCccHHHHHHCCCEEEEeeCCC
Confidence 66664 478888888886 44 589999999999999999999999999999988 78999999999999999999987
Q ss_pred CCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 334 PSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++ +..+++++|+.+.... +++++++|+++|.|+|++||+++ +|+|++||.|
T Consensus 287 ~~-~~~~~~~e~~~~~~~~--------------~~~~~~~l~~aT~~gA~~lg~~~-~G~l~~G~~A 337 (375)
T PRK07213 287 MA-NSPSIFREMEFIYKLY--------------HIEPKEILKMATINGAKILGLIN-VGLIEEGFKA 337 (375)
T ss_pred CC-chHhHHHHHHHHHHHh--------------CcCHHHHHHHHHHHHHHHhCCCC-cCCcCCCCcc
Confidence 65 4678999999865332 38999999999999999999976 8999999987
No 26
>PRK09356 imidazolonepropionase; Validated
Probab=100.00 E-value=1.3e-37 Score=291.74 Aligned_cols=345 Identities=19% Similarity=0.256 Sum_probs=229.2
Q ss_pred cccEEEEecEEEeecCCC----ceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccc
Q 015784 18 SSTMILHNAVIVTMDKES----RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQL 93 (400)
Q Consensus 18 ~~~~li~n~~i~~~~~~~----~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~ 93 (400)
+.+++|+|++|+++++.. +.+++++|+|+||||++||+..+.+. ..+.++||++|++|||||||+|+|+....
T Consensus 2 ~~~~li~~~~v~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~---~~~~~~iD~~g~~v~PG~id~H~Hl~~~~ 78 (406)
T PRK09356 2 MADLLWTNAQLATMDGGGMGELGIIEDGAIAIEDGKIVWVGPEADLPA---AYAAEVIDAGGKLVTPGLIDCHTHLVFGG 78 (406)
T ss_pred CceEEEECCEEEecCCCCccccccccCcEEEEECCEEEEEeCcccccc---ccCceEEECCCCEEeeceEecCCCcccCC
Confidence 457999999999876543 67889999999999999998654321 11258999999999999999999997654
Q ss_pred cccc-----cCCCChhHhhhhc--c---ccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC--CH---HHHHHHHH
Q 015784 94 AKGI-----ADDVDLMTWLHDR--I---WPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--HV---SEMAKAVE 158 (400)
Q Consensus 94 ~~~~-----~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~--~~---~~~~~~~~ 158 (400)
.++. ..+.++.+|+... + ++.....++++.+..++..+.++++.|+|++.+++.. .. ....+..+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~a~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~ 158 (406)
T PRK09356 79 NRANEFELRLQGVSYEEIAAQGGGILSTVRATRAASEEELFAQALPRLDALLAEGVTTVEIKSGYGLDLETELKMLRVAR 158 (406)
T ss_pred CcHHHHHHHHCCCcHHHHHHhcCChHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCceEEEeeccCCCCHHHHHHHHHHHH
Confidence 4331 1233445554321 1 1223446778888888888899999999999975311 11 11222233
Q ss_pred Hc----CCeEEEecccccCCCCCCcccccCCchHHHHHH-HHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHH
Q 015784 159 LL----GLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQ-KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAR 233 (400)
Q Consensus 159 ~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~ 233 (400)
.. +++... ... .+..++..... .....+... .+.++.+... +.+............+++.+.++++.|+
T Consensus 159 ~~~~~~~i~~~~--~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~l~~~~~~A~ 232 (406)
T PRK09356 159 RLGEEHPVDVVT--TFL-GAHAVPPEYKG-RPDAYIDLVCEEMLPAVAEE--GLADAVDVFCETGAFSVEQSERVLEAAK 232 (406)
T ss_pred HHhhhCCCceEe--eee-ecccCCccccC-CHHHHHHHHHHHHhHHHHhc--CCcceEEEEecCCCCCHHHHHHHHHHHH
Confidence 32 333211 111 11112322211 112222221 2233332221 2222222223344567899999999999
Q ss_pred HcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc--c
Q 015784 234 EFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM--L 311 (400)
Q Consensus 234 ~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~--~ 311 (400)
++|+++.+|+.+.... ..++.....+. ..+.|+.++++++++++++.|+.+++||.+++.+ .
T Consensus 233 ~~g~~v~~H~~~~~~~------------~~~~~~~~~~~----~~~~H~~~~~~~~~~~la~~g~~~~~~P~~~~~l~~~ 296 (406)
T PRK09356 233 ALGLPVKIHAEQLSNL------------GGAELAAEYGA----LSADHLEYLDEAGIAAMAEAGTVAVLLPGAFYFLRET 296 (406)
T ss_pred HCCCCEEEEEecccCC------------CHHHHHHHcCC----cEehHhhcCCHHHHHHHHHhCCEEEECccchhhcCcc
Confidence 9999999999764321 12333333332 3578999999999999999999999999998876 4
Q ss_pred CcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCc
Q 015784 312 GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDI 391 (400)
Q Consensus 312 ~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~ 391 (400)
+..|+++|+++|+++++|||+.+. .+++..+........ ...+++++++++++|.|||+++|+++++
T Consensus 297 ~~~~~~~l~~~Gi~v~lgtD~~~~---~~~~~~~~~~~~~~~----------~~~~l~~~~~l~~~T~~~A~~~g~~~~~ 363 (406)
T PRK09356 297 QYPPARLLRDAGVPVALATDFNPG---SSPTESLLLAMNMAC----------TLFRLTPEEALAAVTINAARALGRQDTH 363 (406)
T ss_pred cCchHHHHHHCCCeEEEeCCCCCC---CChhHHHHHHHHHHh----------hhcCCCHHHHHHHHHHHHHHHhCCCCCc
Confidence 678999999999999999998542 234444544332211 1235899999999999999999998888
Q ss_pred cccccCcCC
Q 015784 392 GSLEAGKKV 400 (400)
Q Consensus 392 G~i~~G~~A 400 (400)
|+|++||.|
T Consensus 364 G~i~~G~~A 372 (406)
T PRK09356 364 GSLEVGKKA 372 (406)
T ss_pred eeeCCCCcC
Confidence 999999987
No 27
>cd01293 Bact_CD Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric.
Probab=100.00 E-value=1.4e-37 Score=291.84 Aligned_cols=338 Identities=18% Similarity=0.168 Sum_probs=230.3
Q ss_pred EEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCCC
Q 015784 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDV 101 (400)
Q Consensus 22 li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~ 101 (400)
.|+|++|+++. .++++|+|+||+|++|++..+. + ++.++||++|++|+|||||+|+|+.+...++...+.
T Consensus 1 ~~~~~~~~~~~-----~~~~~v~I~~g~I~~Vg~~~~~----~-~~~~vID~~g~~v~PGlId~H~H~~~~~~~~~~~~~ 70 (398)
T cd01293 1 LLRNARLADGG-----TALVDIAIEDGRIAAIGPALAV----P-PDAEEVDAKGRLVLPAFVDPHIHLDKTFTGGRWPNN 70 (398)
T ss_pred CeeeeEEeCCC-----ceEEEEEEECCEEEEEecCCCC----C-CCCceEeCCCCEEccCEeeeeeccCcccccCCCCCC
Confidence 48899999741 2677999999999999986542 1 356999999999999999999999877666654444
Q ss_pred ChhHhhhhc--cccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC-------CHHHHHHHHHHcCCeEEEeccccc
Q 015784 102 DLMTWLHDR--IWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-------HVSEMAKAVELLGLRACLVQSTMD 172 (400)
Q Consensus 102 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~~ 172 (400)
....|+... +++....+++++.+..+...+.++++.|||++.++... ..+...+.....+.+.......+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (398)
T cd01293 71 SGGTLLEAIIAWEERKLLLTAEDVKERAERALELAIAHGTTAIRTHVDVDPAAGLKALEALLELREEWADLIDLQIVAFP 150 (398)
T ss_pred CccccHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHcChhheeeeecccccccchHHHHHHHHHHHhhccceEEEEecc
Confidence 333443221 11223457888888888889999999999999875421 123344444444433322211111
Q ss_pred CCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhH
Q 015784 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV 252 (400)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~ 252 (400)
. ..... . ....+.++.+...+...+.. .........+++.+.++++.|+++|+++++|+.+...+...
T Consensus 151 ~-----~~~~~--~----~~~~~~v~~~~~~g~~~~~~-~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~ 218 (398)
T cd01293 151 Q-----HGLLS--T----PGGEELMREALKMGADVVGG-IPPAEIDEDGEESLDTLFELAQEHGLDIDLHLDETDDPGSR 218 (398)
T ss_pred C-----ccccC--C----CCHHHHHHHHHHhCCCEEeC-CCCCcCCccHHHHHHHHHHHHHHhCCCCEEEeCCCCCcchh
Confidence 1 00000 0 11223333333322222221 22222345678999999999999999999999877653222
Q ss_pred HhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCCh-------hHHHHHHhcCCeEEECccccccc----------cCccc
Q 015784 253 VMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-------TEIGLLSRAGVKVSHCPASAMRM----------LGFAP 315 (400)
Q Consensus 253 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~-------~~i~~~~~~~~~~~~~p~~~~~~----------~~~~~ 315 (400)
..+ ..++.+...++. .+..+.|+.+++. +.+++++++|+.+++||.+++++ .+..|
T Consensus 219 ~~~------~~~~~~~~~g~~-~~~~i~H~~~~~~~~~~~~~~~~~~l~~~g~~v~~~p~s~~~l~~~~~~~~~~~~~~~ 291 (398)
T cd01293 219 TLE------ELAEEAERRGMQ-GRVTCSHATALGSLPEAEVSRLADLLAEAGISVVSLPPINLYLQGREDTTPKRRGVTP 291 (398)
T ss_pred HHH------HHHHHHHHhCCC-CCEEeeecchhhcCCHHHHHHHHHHHHHcCCeEEeCCCcchhhcccccCCCCCCCCCc
Confidence 111 145666777776 6788999998762 45999999999999999998654 45689
Q ss_pred HHHHHHcCCcEEEcCCCCC----CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCc
Q 015784 316 IKEMLHADICVSLGTDGAP----SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDI 391 (400)
Q Consensus 316 ~~~~~~~Gv~v~~gtD~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~ 391 (400)
+++|+++|+++++|||++. +....+++.+++.+....+.. ...+.+++|+++|.|+|+++|+ +.
T Consensus 292 ~~~~~~~Gv~v~lGTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~al~~aT~~~A~~lg~--~~ 359 (398)
T cd01293 292 VKELRAAGVNVALGSDNVRDPWYPFGSGDMLEVANLAAHIAQLG----------TPEDLALALDLITGNAARALGL--ED 359 (398)
T ss_pred HHHHHHCCCeEEECCCCCCCCCcCCCCCCHHHHHHHHHHHHcCC----------ChhhHHHHHHhcChhhhhhcCC--cC
Confidence 9999999999999999842 223467888888765433211 1135689999999999999999 36
Q ss_pred cccccCcCC
Q 015784 392 GSLEAGKKV 400 (400)
Q Consensus 392 G~i~~G~~A 400 (400)
|+|++||.|
T Consensus 360 G~l~~Gk~A 368 (398)
T cd01293 360 YGIKVGCPA 368 (398)
T ss_pred cccccCCcc
Confidence 999999987
No 28
>PRK09230 cytosine deaminase; Provisional
Probab=100.00 E-value=3.8e-37 Score=287.23 Aligned_cols=338 Identities=16% Similarity=0.179 Sum_probs=237.6
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
..++|+|++|+++. . ..+|+|+||+|++|++..+.+ ..+.++||++|++|||||||+|+|+.....++..
T Consensus 4 ~~~li~~~~~~~~~---~---~~~i~i~~g~I~~i~~~~~~~----~~~~~~id~~g~~v~PGlid~H~H~~~~~~~~~~ 73 (426)
T PRK09230 4 ALMTIKNARLPGKE---G---LWQITIEDGKISAIEPQSEAS----LEAGEVLDAEGGLAIPPFIEPHIHLDTTQTAGEP 73 (426)
T ss_pred ceEEEECcEEcCCC---e---eEEEEEECCEEEEecCCCCCC----CCCCceEeCCCCEeccceeEEEEccccceecCCC
Confidence 46899999998632 1 248999999999999864311 1245899999999999999999999887666644
Q ss_pred ---CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC--C----HHHHHHHHHHcCCeEEEecc
Q 015784 99 ---DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--H----VSEMAKAVELLGLRACLVQS 169 (400)
Q Consensus 99 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~--~----~~~~~~~~~~~g~~~~~~~~ 169 (400)
.+.++.+|+... ++.....++++.+..+...+.+++++|+|++.++... . .+.+.+..+..+-..-++..
T Consensus 74 ~~~~~~~l~~~i~~~-~~~~~~~t~ed~~~~a~~~~~e~l~~GvTtvr~~~d~~~~~~~~~~a~~~~~~~~~~~~~~~i~ 152 (426)
T PRK09230 74 NWNQSGTLFEGIERW-AERKALLTHEDVKQRAWQTLKWQIANGIQHVRTHVDVSDPTLTALKAMLEVKEEVAPWVDLQIV 152 (426)
T ss_pred ccCCCCCHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHcCcccEEeccccCCcchhHHHHHHHHHHHhhCcceEEEE
Confidence 456688898764 5555667889999999999999999999999976421 1 12233333332221111111
Q ss_pred cccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccC--CHHHHHHHHHHHHHcCCeeeEecCCCc
Q 015784 170 TMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNA--TDRLLLETRDMAREFKTGIHMHVAEIP 247 (400)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~e~l~~~~~~a~~~~~~v~~H~~~~~ 247 (400)
.+.....+.. ..... .++......... +...++..+.. +++.+..++++|+++|+++++|+.|..
T Consensus 153 a~~~~~~~~~----~~~~~-------~l~~a~~~~~~~--vg~~p~~~~~~~~~~e~l~~~~~~A~~~g~~~~~H~~E~~ 219 (426)
T PRK09230 153 AFPQEGILSY----PNGEA-------LLEEALRLGADV--VGAIPHFEFTREYGVESLHKAFALAQKYDRLIDVHCDEID 219 (426)
T ss_pred eccCccccCC----ccHHH-------HHHHHHHcCCCE--EeCCCCccccchhHHHHHHHHHHHHHHhCCCcEEEECCCC
Confidence 1111100111 01111 222222222221 22345554443 578999999999999999999999876
Q ss_pred hhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC-------ChhHHHHHHhcCCeEEECccccccc----------
Q 015784 248 YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV-------NHTEIGLLSRAGVKVSHCPASAMRM---------- 310 (400)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~-------~~~~i~~~~~~~~~~~~~p~~~~~~---------- 310 (400)
.+...... ..++.+...+ ++.+.++.|+.++ ++++++++++.|+.+++||.+|+++
T Consensus 220 ~~~~~~~~------~~~~~~~~~g-l~~~v~~~H~~~l~~~~~~~~~~~~~~La~~gv~vv~cP~sn~~l~~~~~~~p~~ 292 (426)
T PRK09230 220 DEQSRFVE------TVAALAHREG-MGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKR 292 (426)
T ss_pred CcchHHHH------HHHHHHHHhC-CCCCEEEEecCchhcCCHHHHHHHHHHHHHcCCeEEECcchhhhhcCCCCCCCCC
Confidence 65432221 2678888888 6889999999999 5789999999999999999999865
Q ss_pred cCcccHHHHHHcCCcEEEcCCCCCC----CCCCCHHHHHHHHHHHhcccccccCCCCCCCCC-CHHHHHHHHhHHHHHHc
Q 015784 311 LGFAPIKEMLHADICVSLGTDGAPS----NNRMSIVDEMYLASLINKGREVFANGTTDPAAL-PAETVLRMATINGAKSV 385 (400)
Q Consensus 311 ~~~~~~~~~~~~Gv~v~~gtD~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~al~~~T~~~A~~l 385 (400)
.+..|+++|+++||+|++|||+... ....+++.+++......+.. .. +++++|+|+|.|||++|
T Consensus 293 ~g~~pi~~l~~aGv~V~lGTD~~~d~~~~~~~~d~~~~~~~~~~~~~~~-----------~~~~~~~~l~maT~~gA~al 361 (426)
T PRK09230 293 RGITRVKEMLEAGINVCFGHDDVFDPWYPLGTANMLQVLHMGLHVCQLM-----------GYGQINDGLNLITTHSARTL 361 (426)
T ss_pred CCCcCHHHHHHCCCeEEEecCCCCCCCcCCCCCCHHHHHHHHHHHHhhC-----------ChhhHHHHHHHHhcchhHHh
Confidence 4567899999999999999997521 12467888777654333211 01 36899999999999999
Q ss_pred CCCCCccccccCcCC
Q 015784 386 LWDNDIGSLEAGKKV 400 (400)
Q Consensus 386 g~~~~~G~i~~G~~A 400 (400)
|+++ .| |++||.|
T Consensus 362 g~~~-~g-le~G~~A 374 (426)
T PRK09230 362 NLQD-YG-IEVGNPA 374 (426)
T ss_pred CCCC-cC-CCCCCcC
Confidence 9987 68 9999987
No 29
>PRK14085 imidazolonepropionase; Provisional
Probab=100.00 E-value=3.8e-37 Score=285.00 Aligned_cols=340 Identities=17% Similarity=0.246 Sum_probs=222.8
Q ss_pred ccEEEEe-cEEEeecCCC-----ceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccc
Q 015784 19 STMILHN-AVIVTMDKES-----RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQ 92 (400)
Q Consensus 19 ~~~li~n-~~i~~~~~~~-----~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~ 92 (400)
++++|+| +.|++++... +++++++|+|+||+|++|++..+. + .+.++||++|++|||||||+|+|+...
T Consensus 1 ~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~v~i~~g~I~~Vg~~~~~----~-~~~~~iD~~g~~v~PGlId~H~Hl~~~ 75 (382)
T PRK14085 1 MSTLITNIGELVTNDPELGEGPLGVLRDAAVVVEGGRVAWVGPAADA----P-AADERVDAGGRAVLPGFVDSHSHLVFA 75 (382)
T ss_pred CcEEEEcccEEEcCCCcccCCCcccccCcEEEEECCEEEEEcCCccC----C-CCCeEEeCCCCEEecCeEecCcCcccc
Confidence 3689999 5999987655 678999999999999999986432 1 246899999999999999999999764
Q ss_pred cccccc--CCCChhHhhhhcc---ccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC--CHHHHHHHHHHcCCeEE
Q 015784 93 LAKGIA--DDVDLMTWLHDRI---WPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--HVSEMAKAVELLGLRAC 165 (400)
Q Consensus 93 ~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~--~~~~~~~~~~~~g~~~~ 165 (400)
..++.. ...+...|+.+.+ ++....++.++.+..+...+..++++|+|++.+.+.. ......+..+..+ +..
T Consensus 76 ~~r~~~~~~~~~~~~~~~~~i~~~~~~~~~~t~e~~~~~a~~~~~~~l~~G~Ttv~~~~~~~~~~~~~~~~~~~~~-~~~ 154 (382)
T PRK14085 76 GDRSAEFAARMAGEPYSAGGIRTTVAATRAASDEELRANVRRLVAEALRQGTTTVETKTGYGLTVEDEARSARIAA-EFT 154 (382)
T ss_pred CChhHHHHhhhcCCCccCCChHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCceEEEcCCcCCCCHHHHHHHHHHHH-Hhh
Confidence 433210 0000011111111 1233456778888888889999999999999997532 2333333222211 110
Q ss_pred EecccccCCCCCCcccccCCchHHHHHHH-HHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecC
Q 015784 166 LVQSTMDCGEGLPASWAVRTTDDCIQSQK-ELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVA 244 (400)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~ 244 (400)
..... ..+..++..+. ......+.... ..+...... ...++++... ...+++.++++++.+++.|+++.+|+.
T Consensus 155 ~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~idi~~~~---~~~~~~~l~~~~~~a~~~g~~v~~H~~ 228 (382)
T PRK14085 155 DEVTF-LGAHVVPPEYA-GDADEYVDLVCGPMLDAVAPH-ARWIDVFCER---GAFDEDQSRRVLTAGRAAGLGLRVHGN 228 (382)
T ss_pred hccee-eccccCCcccC-CCHHHHHHHHHHHHHHHHHHh-CCeEEEEecC---CCCCHHHHHHHHHHHHHcCCCeEEEeC
Confidence 00000 00111121111 12222222211 111112221 3345554322 246788999999999999999999997
Q ss_pred CCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcC
Q 015784 245 EIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHAD 323 (400)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~G 323 (400)
+.... ..++.+.+.|.. .++|+.++++++++++++.|+.+++||.+++.. .+..|+++|+++|
T Consensus 229 ~~~~~------------~~v~~~~~~g~~----~i~H~~~l~~~~~~~la~~gv~~~~~P~~~~~~~~~~~~~~~l~~aG 292 (382)
T PRK14085 229 QLGPG------------PGVRLAVELGAA----SVDHCTYLTDADVDALAGSGTVATLLPGAEFSTRQPYPDARRLLDAG 292 (382)
T ss_pred cccCC------------hHHHHHHHcCCC----cHHHhCCCCHHHHHHHHHcCCEEEECcHHHHhcCCCCchHHHHHHCC
Confidence 53210 134444555543 378999999999999999999999999998766 6678999999999
Q ss_pred CcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 324 ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 324 v~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+++++|||+++.. .+...+........ ...+++++++++++|.|||++||+++ +|+|++||.|
T Consensus 293 v~v~lgsD~~~~~---~~~~~~~~~~~~~~----------~~~~l~~~~al~~aT~~~A~~lg~~~-~G~l~~G~~A 355 (382)
T PRK14085 293 VTVALASDCNPGS---SYTSSMPFCVALAV----------RQMGMTPAEAVWAATAGGARALRRDD-VGVLAVGARA 355 (382)
T ss_pred CcEEEEeCCCCCC---ChHHHHHHHHHHHH----------HhcCCCHHHHHHHHHHHHHHHcCCCC-CCCcCCCCCC
Confidence 9999999986431 12233333221110 13458999999999999999999985 7999999987
No 30
>TIGR01224 hutI imidazolonepropionase. This enzyme catalyzes the third step in histidine degradation.
Probab=100.00 E-value=1.4e-36 Score=282.13 Aligned_cols=322 Identities=20% Similarity=0.240 Sum_probs=217.3
Q ss_pred eceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccc-----cCCCChhHhhhhc--c
Q 015784 39 RNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI-----ADDVDLMTWLHDR--I 111 (400)
Q Consensus 39 ~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~-----~~~~~~~~~~~~~--~ 111 (400)
++++|+|+||+|++||+....+. ..+.++||++|++|||||||+|+|+.....++. ..+.++.+|+... +
T Consensus 2 ~~~~v~i~~g~I~~vg~~~~~~~---~~~~~~iD~~g~~v~PGlin~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (377)
T TIGR01224 2 EDAVILIHGGKIVWIGQLAALPG---EEATEIIDCGGGLVTPGLVDPHTHLVFAGDRVNEFEMKLQGASYLEILAQGGGI 78 (377)
T ss_pred CceEEEEECCEEEEEechhhCCc---ccCCeEEeCCCCEEcccEEecccCccccCCcHHHHHHHhCCCCHHHHHHhcCCh
Confidence 57899999999999998543221 124689999999999999999999987655542 3566888998652 2
Q ss_pred ---ccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC--cCCH-------HHHHHHHHHcCCeEEEecccccCCCCCCc
Q 015784 112 ---WPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--GQHV-------SEMAKAVELLGLRACLVQSTMDCGEGLPA 179 (400)
Q Consensus 112 ---~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~--~~~~-------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 179 (400)
++.....++++.+..+...+.+++++|+|++.... +... +...+.....+++.... .... ..++.
T Consensus 79 ~~~~~~~~~~~~ed~~~~a~~~~~e~l~~Gvt~ve~~~~~g~~~~~~~~~~~a~~~~~~~~~i~~~~~--~~~~-~~~~~ 155 (377)
T TIGR01224 79 LSTVRATRAASEEELLKLALFRLKSMLRSGTTTAEVKSGYGLDLETELKMLRAAKALHEEQPVDVVTT--FLGA-HAVPP 155 (377)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHCCceEEEecccCCCCHHHHHHHHHHHHHHHhhCCCceEee--eeec-ccCCc
Confidence 25556788899999999999999999999995321 1111 12222233344544332 1111 11121
Q ss_pred ccccCCchHHHHHH-HHHHHHhccCC-CCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhc
Q 015784 180 SWAVRTTDDCIQSQ-KELYAKHHHAA-DGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR 257 (400)
Q Consensus 180 ~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~ 257 (400)
.... .....+... ...++++.... ...++ ..+++. ..+.+.+.++++.|+++|+++.+|+.+....
T Consensus 156 ~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~--~~~~~~~~~~~~~A~~~g~~v~~H~~e~~~~-------- 223 (377)
T TIGR01224 156 EFQG-RPDDYVDGICEELIPQVAEEGLASFAD-VFCEAG--VFSVEQSRRILQAAQEAGLPVKLHAEELSNL-------- 223 (377)
T ss_pred cccC-CHHHHHHHHHHHHHHHHHHhCCCCeeE-EEecCC--CcCHHHHHHHHHHHHHCCCCEEEEecCCCCC--------
Confidence 1101 111222211 22333332211 11122 133332 3456789999999999999999999874321
Q ss_pred CCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCC-C
Q 015784 258 KVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAP-S 335 (400)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~-~ 335 (400)
..++.+...+. ..+.|+.++++++++++++.|+.+++||.+++.+ .+..|+++++++|+++++|||+.+ +
T Consensus 224 ----~~~~~~~~~g~----~~~~H~~~~~~~~l~~la~~g~~~~~~P~~~~~l~~~~~p~~~l~~~Gv~v~lgTD~~~~~ 295 (377)
T TIGR01224 224 ----GGAELAAKLGA----VSADHLEHASDAGIKALAEAGTVAVLLPGTTFYLRETYPPARQLIDYGVPVALATDLNPGS 295 (377)
T ss_pred ----CHHHHHHHcCC----CccHHHhcCCHHHHHHHHhcCCEEEECchHHHhcCCcCccHHHHHHCCCCEEEECCCCCCC
Confidence 13444444443 3467999999999999999999999999999887 678999999999999999999754 3
Q ss_pred CCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 336 NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++..+++..+.... ...+++++++++++|.|||+++|+++++|+|++||.|
T Consensus 296 ~~~~~~~~~~~~~~--------------~~~~ls~~eal~~~T~~~A~~lg~~~~~G~l~~G~~A 346 (377)
T TIGR01224 296 SPTLSMQLIMSLAC--------------RLMKMTPEEALHAATVNAAYALGLGEERGTLEAGRDA 346 (377)
T ss_pred ChhHHHHHHHHHHH--------------HhcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCcC
Confidence 22223333333221 1235999999999999999999999888999999987
No 31
>PRK07572 cytosine deaminase; Validated
Probab=100.00 E-value=8.8e-35 Score=272.64 Aligned_cols=337 Identities=15% Similarity=0.137 Sum_probs=225.6
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccc-
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI- 97 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~- 97 (400)
++++|+|++|+++. ...+|+|+||+|++|++..+ ....++||+.|++|+|||||+|+|+..+..++.
T Consensus 2 ~~~~i~~~~i~~~~------~~~~i~i~~g~I~~v~~~~~------~~~~~~id~~g~~~~PG~id~h~h~~~~~~~~~~ 69 (426)
T PRK07572 2 FDLIVRNANLPDGR------TGIDIGIAGGRIAAVEPGLQ------AEAAEEIDAAGRLVSPPFVDPHFHMDATLSYGLP 69 (426)
T ss_pred CcEEEECeEECCCC------eeEEEEEECCEEEEecCCCC------CCcCceEeCCCCEEcccceehhhCcchhhccCCC
Confidence 45789999999632 24589999999999998532 124589999999999999999999987654443
Q ss_pred --cCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc---CC---HHHHHHHHHHcCCeEEEecc
Q 015784 98 --ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QH---VSEMAKAVELLGLRACLVQS 169 (400)
Q Consensus 98 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~---~~---~~~~~~~~~~~g~~~~~~~~ 169 (400)
..+..+.+|+.-. -.....++.++.+......+..+++.|+|+++++.. .. .....+.....+-+..+...
T Consensus 70 ~~~~~g~l~e~l~~~-~~~~~~~t~edl~~~a~~~~~e~l~~G~Ttvrd~~d~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 148 (426)
T PRK07572 70 RVNASGTLLEGIALW-GELKPLLTQEALVERALRYCDWAVARGLLAIRSHVDVCDPRLLAVEALLEVRERVAPYLDLQLV 148 (426)
T ss_pred CCCCCCCHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHcCcccEeeccccCCCcccHHHHHHHHHHHhhccceEEEE
Confidence 3456777777321 122234678888888889999999999999999631 11 12222222222211111111
Q ss_pred cccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCC--HHHHHHHHHHHHHcCCeeeEecCCCc
Q 015784 170 TMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNAT--DRLLLETRDMAREFKTGIHMHVAEIP 247 (400)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~e~l~~~~~~a~~~~~~v~~H~~~~~ 247 (400)
.+.....+. . ........+.++ .+...+. ..++.....+ .+.++.+++.|+++|+++.+|+.++.
T Consensus 149 a~~~~g~~~------~-~~~~~~~~~~l~----~g~d~iG--g~p~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~ 215 (426)
T PRK07572 149 AFPQDGVLR------S-PGAVDNLERALD----MGVDVVG--GIPHFERTMADGAESVRLLCEIAAERGLRVDMHCDESD 215 (426)
T ss_pred eccChhhcc------C-ccHHHHHHHHHH----cCCCEEe--CCCCCccccchHHHHHHHHHHHHHHcCCCeEEEECCCC
Confidence 111100000 0 011111222222 2222222 2234333333 48999999999999999999998877
Q ss_pred hhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCCh-------hHHHHHHhcCCeEEECccccccc----------
Q 015784 248 YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-------TEIGLLSRAGVKVSHCPASAMRM---------- 310 (400)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~-------~~i~~~~~~~~~~~~~p~~~~~~---------- 310 (400)
.......+ ...+.+.+.|+.+ +.++.|+..++. ++++++++.|+.+++||.+++.+
T Consensus 216 ~~~~~~~~------~~~~~~~~~G~~~-~v~~~H~~~l~~~~~~~~~~~~~~la~~g~~vv~~P~~n~~l~~~~~~~~~~ 288 (426)
T PRK07572 216 DPLSRHIE------TLAAETQRLGLQG-RVAGSHLTSMHSMDNYYVSKLIPLMAEAGVNAIANPLINITLQGRHDTYPKR 288 (426)
T ss_pred ChhHHHHH------HHHHHHHHhCCCC-CEEEEccchhhcCCHHHHHHHHHHHHHcCCeEEECchhhhhhcCCCCCCCCC
Confidence 65443332 1445667778877 788999988765 56999999999999999988754
Q ss_pred cCcccHHHHHHcCCcEEEcCCCCC----CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 015784 311 LGFAPIKEMLHADICVSLGTDGAP----SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 386 (400)
Q Consensus 311 ~~~~~~~~~~~~Gv~v~~gtD~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg 386 (400)
.+..++++|+++||++++|||+.. ++...++++.++.+....+.. . ...++++|+++|.|||++||
T Consensus 289 ~g~~~v~~l~~~GV~v~lGtD~~~~~~~~~~~~~~~e~~~~~~~~~~~~---------~-~~~l~~~l~~aT~~~A~~lg 358 (426)
T PRK07572 289 RGMTRVPELMAAGINVAFGHDCVMDPWYSLGSGDMLEVAHMGLHVAQMT---------G-QDAMRACFDAVTVNPARIMG 358 (426)
T ss_pred CCCcCHHHHHHCCCcEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHcCC---------C-HHHHHHHHHHhhcchHHhhC
Confidence 356789999999999999999852 234578888887755443211 0 01346778899999999999
Q ss_pred CCCCccccccCcCC
Q 015784 387 WDNDIGSLEAGKKV 400 (400)
Q Consensus 387 ~~~~~G~i~~G~~A 400 (400)
+++ .| |++||.|
T Consensus 359 l~~-~g-i~~G~~A 370 (426)
T PRK07572 359 LEG-YG-LEPGCNA 370 (426)
T ss_pred CCC-cC-CCCCCcC
Confidence 987 57 9999987
No 32
>COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=100.00 E-value=7.9e-35 Score=271.52 Aligned_cols=355 Identities=20% Similarity=0.169 Sum_probs=224.4
Q ss_pred CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccc
Q 015784 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~ 96 (400)
...++++.|++|+|++...+. ..+|+|+||||++||...++..... +.+++||++|++|+|||||+|.|+...+...
T Consensus 3 ~~adlil~nG~i~T~~~~~p~--aeAvaI~dGrI~avG~~~~~~~~~~-~~t~viDL~Gk~v~PGfvDaH~Hl~~~G~~~ 79 (535)
T COG1574 3 MAADLILHNGRIYTMDEARPT--AEAVAIKDGRIVAVGSDAELKALAG-PATEVIDLKGKFVLPGFVDAHLHLISGGLSL 79 (535)
T ss_pred cccceeEECCEEEeccCCCcc--eeEEEEcCCEEEEEcChHHHHhhcC-CCceEEeCCCCEeccccchhhHHHHHhhhhh
Confidence 346789999999999875553 3499999999999999887766443 5789999999999999999999987432211
Q ss_pred ---------------------------------ccCCCChh------------------------------Hhhhhccc-
Q 015784 97 ---------------------------------IADDVDLM------------------------------TWLHDRIW- 112 (400)
Q Consensus 97 ---------------------------------~~~~~~~~------------------------------~~~~~~~~- 112 (400)
.+.+.+.. .|++....
T Consensus 80 ~~~~~~~~~~~~~~~~~i~~~a~~~~~~~w~~~vG~g~~~~~~~~~~~t~~~lD~~~~~~Pv~l~r~~~H~a~~Ns~aL~ 159 (535)
T COG1574 80 LELNLDGVRSLDDLLAALRRQAARTPPGQWVVVVGWGWDEQFWEERLPTLAELDAAAPDHPVLLIRLDGHVAVANSAALR 159 (535)
T ss_pred hcccccccCCHHHHHHHHHHHHHhCCCCCceEEEEcChhhhccccCCCcHHHhhccCCCCCEEEEeccChHHHHhHHHHH
Confidence 00000000 01110000
Q ss_pred -------------------------------------cccCCCChhhHHHHHHH-HHHHHHhcCcceeeccCc--CCHH-
Q 015784 113 -------------------------------------PYESNMTEEDSYISTLL-CGIELIHSGVTCFAEAGG--QHVS- 151 (400)
Q Consensus 113 -------------------------------------~~~~~~~~~~~~~~~~~-~~~~~l~~GvTt~~~~~~--~~~~- 151 (400)
......+.+........ +.+.+.+.|+|++.++.. ....
T Consensus 160 ~~Gi~~~t~~p~gg~~~~d~~g~ptG~L~e~a~~~~~~~~~~~~~~~~~~~~~~~a~~~l~s~GiT~v~d~~~~~~~~~~ 239 (535)
T COG1574 160 LAGITRDTPDPPGGIIGRDADGEPTGLLLENAQALVARLAPPPSPAEELEAAAARAARELNSLGITGVHDMAGYQGYYAD 239 (535)
T ss_pred HcCCCCCCCCCCCCcccccCCCCCCeeehHhhHHHHHHhcCCCCchHHHHHHHHHHHHHHHhcCCeEEEcccccccchhH
Confidence 00001111111111112 556788899999999874 1111
Q ss_pred -HHHHH-HHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHH--HHHhccCCCCCeEEE----------------
Q 015784 152 -EMAKA-VELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKEL--YAKHHHAADGRIRIW---------------- 211 (400)
Q Consensus 152 -~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---------------- 211 (400)
...+. .....+...+...++.... .......... ...+.+ .+.+|.+
T Consensus 240 ~~~~r~~~~~~~l~~rv~~~l~~~~~-----------~~~~~~~~~~~~~~~~~~--~g~~K~f~Dgslg~rtA~l~~~y 306 (535)
T COG1574 240 YEAYRALAAGGELPVRVALLLFTEDL-----------KEERLDLLRQTGAKGLLQ--GGGVKLFADGSLGERTALLAAPY 306 (535)
T ss_pred HHHHHHHHhcCcceEEEEeeccccch-----------hhHHHhhcccCCccceee--cCceEEEEeCCCCcchhhccCcc
Confidence 12222 2222233222222221110 0000000000 000000 0111111
Q ss_pred ---eeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHH-HHhHhCCCCCCeeeEEecCCCh
Q 015784 212 ---FGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVT-FLDKIEFLQNNLLSAHTVWVNH 287 (400)
Q Consensus 212 ---~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~h~~~~~~ 287 (400)
..+.+....+++.+.++++.|.++|+++.+|+.++.+....+. ..| ...+.+..+.++.++|...+++
T Consensus 307 ~d~~~~~G~~l~~~e~l~~~v~~a~~~gl~v~vHAiGD~Av~~~Ld--------afE~~~~~~~~~~~r~rieH~~~v~~ 378 (535)
T COG1574 307 ADGPGPSGELLLTEEELEELVRAADERGLPVAVHAIGDGAVDAALD--------AFEKARKKNGLKGLRHRIEHAELVSP 378 (535)
T ss_pred cCCCCCCCCcccCHHHHHHHHHHHHHCCCcEEEEEechHHHHHHHH--------HHHHHhhhcCCccCCceeeeeeecCH
Confidence 0111345778999999999999999999999998877443222 222 2223334556899999999999
Q ss_pred hHHHHHHhcCCeEEECccccc-------------cccCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcc
Q 015784 288 TEIGLLSRAGVKVSHCPASAM-------------RMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKG 354 (400)
Q Consensus 288 ~~i~~~~~~~~~~~~~p~~~~-------------~~~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~ 354 (400)
++++++++.|+.+++||..-. +....+|++.|+++|++++.|||+|.. ..++|..+..+......
T Consensus 379 ~~i~R~~~Lgv~~svQP~f~~~~~~~~~~rlG~~r~~~~~p~~~ll~~G~~la~gSD~Pv~--~~dP~~~i~~AVtr~~~ 456 (535)
T COG1574 379 DQIERFAKLGVIASVQPNFLFSDGEWYVDRLGEERASRSYPFRSLLKAGVPLAGGSDAPVE--PYDPWLGIYAAVTRKTP 456 (535)
T ss_pred hHHHHHHhcCceEeeccccccccchHHHHhhhhhhhhccCcHHHHHHCCCeEeccCCCCCC--CCChHHHHHHHHcCCCC
Confidence 999999999999999998643 113456999999999999999999874 47899888888765432
Q ss_pred cccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 355 REVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 355 ~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
..... ..+..||++|||+++|.++|.+.|.++++|+|++||.|
T Consensus 457 ~g~~~---~~~~~L~~~eAL~~yT~~~A~a~~~e~~~G~Le~G~~A 499 (535)
T COG1574 457 GGRVL---GPEERLTREEALRAYTEGGAYASGAEGEKGSLEPGKLA 499 (535)
T ss_pred CCCCC---ccccccCHHHHHHHHhhhhHHhhhccccccccccCcee
Confidence 21110 01125999999999999999999999999999999987
No 33
>cd01296 Imidazolone-5PH Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate. In bacteria, the enzyme is part of histidine utilization (hut) operon.
Probab=100.00 E-value=1.6e-34 Score=267.92 Aligned_cols=321 Identities=20% Similarity=0.262 Sum_probs=211.5
Q ss_pred EEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccc-----cCCCChhHhhhhc---cc--
Q 015784 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI-----ADDVDLMTWLHDR---IW-- 112 (400)
Q Consensus 43 i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~-----~~~~~~~~~~~~~---~~-- 112 (400)
|+|+||+|++|++..+.+... ..+.++||++|++|+|||||+|+|+..+..++. ..+..+.+|+... .|
T Consensus 1 i~i~~g~I~~ig~~~~~~~~~-~~~~~~iD~~G~~v~Pg~vn~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (371)
T cd01296 1 IAIRDGRIAAVGPAASLPAPG-PAAAEEIDAGGRAVTPGLVDCHTHLVFAGDRVDEFAARLAGASYEEILAAGGGILSTV 79 (371)
T ss_pred CEEECCEEEEEeCchhccccc-CCCceEEECCCCEEecceeecCCCCcCCCCcHHHHHHHHCCCCHHHHHHcCCChHHHH
Confidence 579999999999865432100 124589999999999999999999987654431 2455677777641 11
Q ss_pred cccCCCChhhHHHHHHHHHHHHHhcCcceeeccC--cCC---HHHHHHHHHHcCCe--EEEecccccCCCCCCcccccCC
Q 015784 113 PYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--GQH---VSEMAKAVELLGLR--ACLVQSTMDCGEGLPASWAVRT 185 (400)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~--~~~---~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~ 185 (400)
+....+++++.+..+...+..++++|+|++.+.. ... .....+...+.+.+ ..+...... +..++.....
T Consensus 80 ~~~~~~~~~d~~~~a~~~~~~~~~~Gvt~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~-~~~~p~~~~~-- 156 (371)
T cd01296 80 RATRAASEDELFASALRRLARMLRHGTTTVEVKSGYGLDLETELKMLRVIRRLKEEGPVDLVSTFLG-AHAVPPEYKG-- 156 (371)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHCCceEEEecccCCCCHHHHHHHHHHHHHHHhhCCCceEeeeee-cccCCcccCC--
Confidence 3345678888889999999999999999998731 111 11233333333331 111111110 1112221100
Q ss_pred chHHHH-HHHHHHHHhc-cCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCCh
Q 015784 186 TDDCIQ-SQKELYAKHH-HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGT 263 (400)
Q Consensus 186 ~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~ 263 (400)
...... ...+.++.+. ......++.+ +.. ...+.+.+.++++.|+++|+++.+|+.+.... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~A~~~g~~v~~H~~e~~~~------------~~ 221 (371)
T cd01296 157 REEYIDLVIEEVLPAVAEENLADFCDVF-CEK--GAFSLEQSRRILEAAKEAGLPVKIHADELSNI------------GG 221 (371)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCCEEEEe-ecC--CccCHHHHHHHHHHHHHCCCeEEEEEcCcCCC------------CH
Confidence 011111 1233333322 1112233332 222 23457899999999999999999999875421 12
Q ss_pred HHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCCC-CCCH
Q 015784 264 VTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNN-RMSI 341 (400)
Q Consensus 264 ~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~-~~~~ 341 (400)
++.....+. ..+.|+.++++++++++++.|+.+++||.+++.+ .+..|+++|+++|+++++|||+.+... ..++
T Consensus 222 ~~~~~~~g~----~~i~H~~~~~~~~i~~la~~g~~v~~~P~~~~~l~~~~~~~~~l~~~Gv~v~lgsD~~p~~~~~~~l 297 (371)
T cd01296 222 AELAAELGA----LSADHLEHTSDEGIAALAEAGTVAVLLPGTAFSLRETYPPARKLIDAGVPVALGTDFNPGSSPTSSM 297 (371)
T ss_pred HHHHHHcCC----CeeHHhcCCCHHHHHHHHHcCCeEEEChHHHHHhCCCCCCHHHHHHCCCcEEEecCCCCCCChHHHH
Confidence 333333333 3478999999999999999999999999998876 567899999999999999999743321 1124
Q ss_pred HHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 342 VDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+.++..+... .+++++++++++|.|||+++|+++++|+|++||+|
T Consensus 298 ~~~~~~~~~~--------------~~l~~~~al~~aT~~~A~~lg~~~~~G~i~~G~~A 342 (371)
T cd01296 298 PLVMHLACRL--------------MRMTPEEALTAATINAAAALGLGETVGSLEVGKQA 342 (371)
T ss_pred HHHHHHHHHh--------------cCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCCc
Confidence 4455444322 34899999999999999999998878999999987
No 34
>cd01314 D-HYD D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin. The hydrolysis of dihydropyrimidines is the second step of reductive catabolism of pyrimidines in human. The hydrolysis of 5-substituted hydantoins in microorganisms leads to enantiomerically pure N-carbamyl amino acids, which are used for the production of antibiotics, peptide hormones, pyrethroids, and pesticides. HYDs are classified depending on their stereoselectivity. This family also includes collapsin response regulators (CRMPs), cytosolic proteins involved in neuronal differentiation and axonal guidance which have strong homology to DHPases, but lack most of the active site residues.
Probab=100.00 E-value=6.6e-34 Score=269.67 Aligned_cols=326 Identities=19% Similarity=0.228 Sum_probs=208.0
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|+++++ +.+++|+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+.....
T Consensus 1 lli~~~~v~~~~~----~~~~~i~I~~g~I~~ig~~~~~-----~~~~~viD~~g~~vlPGlID~H~H~~~~~~------ 65 (447)
T cd01314 1 LIIKNGTIVTADG----SFKADILIEDGKIVAIGPNLEA-----PGGVEVIDATGKYVLPGGIDPHTHLELPFM------ 65 (447)
T ss_pred CEEECCEEECCCC----ceeeeEEEECCEEEEeeCCCCC-----CCCceEEECCCCEEecCEEecccccccccc------
Confidence 4799999998542 3568999999999999975321 123589999999999999999999965210
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC----CHHHHHHHHHHcCCeEEEecccccCCCC
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEG 176 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 176 (400)
...+.++.+..+ +.++.+|||++.++... ......+...... ......+.+..
T Consensus 66 ---------------~~~~~e~~~~~~----~~a~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~d~~~~ 122 (447)
T cd01314 66 ---------------GTVTADDFESGT----RAAAAGGTTTIIDFAIPNKGQSLLEAVEKWRGKA----DGKSVIDYGFH 122 (447)
T ss_pred ---------------CccCcchHHHHH----HHHHhCCCcEEEeCCCCCCCCCHHHHHHHHHHHh----cCCCcccEEEE
Confidence 112334444433 45678999999997632 1222222221110 01111111100
Q ss_pred CCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhh
Q 015784 177 LPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256 (400)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~ 256 (400)
.. . .......+....++.+ .+...++.++.++..+..+++.+.++++.+++.++++++|+ |+..+.....+.
T Consensus 123 ~~--~-~~~~~~~~~~~~~l~~----~g~~~ik~~~~~~~~~~~s~~~l~~~~~~a~~~g~~v~~H~-E~~~~~~~~~~~ 194 (447)
T cd01314 123 MI--I-TDWTDSVIEELPELVK----KGISSFKVFMAYKGLLMVDDEELLDVLKRAKELGALVMVHA-ENGDVIAELQKK 194 (447)
T ss_pred Ee--e-cCCChHHHHHHHHHHH----cCCCEEEEEeccCCCCCCCHHHHHHHHHHHHhcCCeEEEEc-CCHHHHHHHHHH
Confidence 00 0 0011222333333322 23345777777777788899999999999999999999996 666655444332
Q ss_pred c---CCCC-------ChH--H------HHhHhCCCCCCeeeEEecCCCh-hHHHHHHhcCCeE--EECccccccc-----
Q 015784 257 R---KVDH-------GTV--T------FLDKIEFLQNNLLSAHTVWVNH-TEIGLLSRAGVKV--SHCPASAMRM----- 310 (400)
Q Consensus 257 ~---~~~~-------~~~--~------~l~~~~~~~~~~~~~h~~~~~~-~~i~~~~~~~~~~--~~~p~~~~~~----- 310 (400)
+ +... ++. + .+...+.++.+..+.|+..... ++++.+++.|+.+ .+||.+.+..
T Consensus 195 ~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~~~~~~~~H~s~~~~~~~i~~~k~~g~~v~~~~~ph~l~~~~~~~~ 274 (447)
T cd01314 195 LLAQGKTGPEYHALSRPPEVEAEATARAIRLAELAGAPLYIVHVSSKEAADEIARARKKGLPVYGETCPQYLLLDDSDYW 274 (447)
T ss_pred HHHcCCCChHHhhhcCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCeEEEecCchhheeCHHHhc
Confidence 2 2110 011 1 1344456777888888876432 3578888888654 6899873311
Q ss_pred ----cC-----ccc---------HHHHHHcCCcEEEcCCCCCCCCCCCHHH--------------HHHHHHHHhcccccc
Q 015784 311 ----LG-----FAP---------IKEMLHADICVSLGTDGAPSNNRMSIVD--------------EMYLASLINKGREVF 358 (400)
Q Consensus 311 ----~~-----~~~---------~~~~~~~Gv~v~~gtD~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~ 358 (400)
.+ .+| +.+++++|+.+++|||+.+++...+++. ++++...+.+..
T Consensus 275 ~~~~~g~~~~~~pplr~~~~~~~l~~~l~~G~i~~igsDh~~~~~~~k~~~~~~~~~~~~G~~g~e~~l~~l~~~~~--- 351 (447)
T cd01314 275 KDWFEGAKYVCSPPLRPKEDQEALWDGLSSGTLQTVGSDHCPFNFAQKARGKDDFTKIPNGVPGVETRMPLLWSEGV--- 351 (447)
T ss_pred cccccccceEECCCCCChHHHHHHHHHHhCCCeeEEECCCCCCCHHHhhcccCCHhhCCCCCchHhhhHHHHHHHHH---
Confidence 11 134 4589999999999999987644333322 566655554322
Q ss_pred cCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 359 ANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 359 ~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....++++++++++|.|||++||+.+++|+|++|++|
T Consensus 352 -----~~~~~~~~~~~~~~t~~pA~~~gl~~~~G~l~~G~~A 388 (447)
T cd01314 352 -----AKGRITLEKFVELTSTNPAKIFGLYPRKGTIAVGSDA 388 (447)
T ss_pred -----HcCCCCHHHHHHHHhhHHHHHhCCCCCCCccCCCCcC
Confidence 1235999999999999999999997778999999987
No 35
>PLN02942 dihydropyrimidinase
Probab=100.00 E-value=1.2e-32 Score=261.49 Aligned_cols=330 Identities=18% Similarity=0.228 Sum_probs=207.6
Q ss_pred CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccc
Q 015784 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~ 96 (400)
++.+++|+|++|++.+. ...++|+|+||+|++|++..+. ..+.++||++|++|+|||||+|+|+....+
T Consensus 3 ~~~~lli~~~~v~~~~~----~~~~~i~I~~g~I~~i~~~~~~-----~~~~~~iD~~g~~v~PG~ID~H~H~~~~~~-- 71 (486)
T PLN02942 3 SSTKILIKGGTVVNAHH----QELADVYVEDGIIVAVAPNLKV-----PDDVRVIDATGKFVMPGGIDPHTHLAMPFM-- 71 (486)
T ss_pred CCCcEEEECcEEEcCCC----CeEeEEEEECCEEEEEcCCCCC-----CCCCeEEECCCCEEecCEeeeeeccCcccC--
Confidence 45678999999998542 2457999999999999875321 124689999999999999999999976211
Q ss_pred ccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC---CHHHHHHHHHHcCCeEEEecccccC
Q 015784 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAVELLGLRACLVQSTMDC 173 (400)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~ 173 (400)
.....++.+..+ ..++++||||+.|+... ......+.......+.. ++.
T Consensus 72 -------------------~~~~~ed~~s~s----~aAl~gGvTTv~D~~~~~~~~~~~~~~~~~~~~~~~~-----~d~ 123 (486)
T PLN02942 72 -------------------GTETIDDFFSGQ----AAALAGGTTMHIDFVIPVNGNLLAGYEAYEKKAEKSC-----MDY 123 (486)
T ss_pred -------------------CCcccchHHHHH----HHHHcCCCeEEEeCCCCCCCCHHHHHHHHHHHHhhcC-----CCE
Confidence 112334444444 56799999999997421 11122211111111110 111
Q ss_pred CCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHH
Q 015784 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV 253 (400)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~ 253 (400)
+...... . .......+..++.+.+ +...+++++.++..+..+++.+.+.++.+++.|+++++| .|+.......
T Consensus 124 ~~~~~~~--~-~~~~~~~e~~~l~~~~---gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H-aE~~~~~~~~ 196 (486)
T PLN02942 124 GFHMAIT--K-WDDTVSRDMETLVKEK---GINSFKFFMAYKGSLMVTDELLLEGFKRCKSLGALAMVH-AENGDAVFEG 196 (486)
T ss_pred EEEEEec--C-CcHhHHHHHHHHHHhC---CCceEEEEEecCCCCCCCHHHHHHHHHHHHhcCCeEEEE-cCCHHHHHHH
Confidence 1000000 0 0111122233332222 223467666666666778899999999999999999999 4665544322
Q ss_pred hhh---cCCCC-------Ch-------HH-HHhHhCCCCCCeeeEEecCCCh-hHHHHHHhcCCeEEECcccc-cc----
Q 015784 254 MDT---RKVDH-------GT-------VT-FLDKIEFLQNNLLSAHTVWVNH-TEIGLLSRAGVKVSHCPASA-MR---- 309 (400)
Q Consensus 254 ~~~---~~~~~-------~~-------~~-~l~~~~~~~~~~~~~h~~~~~~-~~i~~~~~~~~~~~~~p~~~-~~---- 309 (400)
.+. .+... ++ ++ .+...+..+.+..+.|+.+.+. ++++.+++.|+.++++|... +.
T Consensus 197 ~~~~~~~G~~~~~~~~~~rP~~~E~~av~~~~~la~~~g~~~~i~H~s~~~~~e~i~~~k~~G~~Vt~e~~ph~L~l~~~ 276 (486)
T PLN02942 197 QKRMIELGITGPEGHALSRPPLLEGEATARAIRLAKFVNTPLYVVHVMSIDAMEEIARARKSGQRVIGEPVVSGLVLDDS 276 (486)
T ss_pred HHHHHHcCCCChhhhhccCCchHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCcEEEEECchhheeCHH
Confidence 211 12100 12 32 2334466778899999999888 89999999998887666631 11
Q ss_pred --------c-cC---cccH---------HHHHHcCCcEEEcCCCCCCCCCCCHH--------------HHHHHHHHHhcc
Q 015784 310 --------M-LG---FAPI---------KEMLHADICVSLGTDGAPSNNRMSIV--------------DEMYLASLINKG 354 (400)
Q Consensus 310 --------~-~~---~~~~---------~~~~~~Gv~v~~gtD~~~~~~~~~~~--------------~~~~~~~~~~~~ 354 (400)
. .+ .+|+ .++++.|+++++|||+.+++...+.+ .+++....+.+.
T Consensus 277 ~~~~~~~~~~~~~k~~PPlr~~~~~~~L~~~l~~G~i~~igTDh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l~~~~~~~ 356 (486)
T PLN02942 277 KLWDPDFTIASKYVMSPPIRPAGHGKALQAALSSGILQLVGTDHCPFNSTQKAFGKDDFRKIPNGVNGIEERMHLVWDTM 356 (486)
T ss_pred HhcCcccccCcceEECCCCCCHHHHHHHHHHhcCCceEEEECCCCCCChHHhhcccCCHhhCCCCcccHHHHHHHHHHHH
Confidence 1 11 2465 48899999999999998764322221 023322222211
Q ss_pred cccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 355 REVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 355 ~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
. ....++++++++++|.|||++||+.+++|+|++|++|
T Consensus 357 ~--------~~~~i~~~~~l~~~t~~pA~~lgl~~~~G~l~~G~~A 394 (486)
T PLN02942 357 V--------ESGQISPTDYVRVTSTECAKIFNIYPRKGAILAGSDA 394 (486)
T ss_pred H--------HcCCCCHHHHHHHHHHHHHHHhCCCCCCCCcCCCCcC
Confidence 1 1234899999999999999999998778999999987
No 36
>PRK05985 cytosine deaminase; Provisional
Probab=100.00 E-value=3.5e-32 Score=253.07 Aligned_cols=334 Identities=16% Similarity=0.174 Sum_probs=214.5
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
++++|+|++|+++. ..+|+|+||+|++|++..+. ..+.++||++|++|+|||||+|+|+.........
T Consensus 2 ~~~~i~~~~i~~~~-------~~~v~i~~g~i~~i~~~~~~-----~~~~~~id~~g~~v~Pg~iD~h~h~~~~~~~~~~ 69 (391)
T PRK05985 2 TDLLFRNVRPAGGA-------AVDILIRDGRIAAIGPALAA-----PPGAEVEDGGGALALPGLVDGHIHLDKTFWGDPW 69 (391)
T ss_pred CCEEEECcEECCCC-------eeEEEEECCEEEEecCCCCC-----CCCCcEEECCCCEEecceEeeEEccCccccCCcc
Confidence 46899999999742 34899999999999986432 1245799999999999999999999764332211
Q ss_pred ----CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc-------CCHHHHHHHHHHcCCeEEEe
Q 015784 99 ----DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-------QHVSEMAKAVELLGLRACLV 167 (400)
Q Consensus 99 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~-------~~~~~~~~~~~~~g~~~~~~ 167 (400)
....+.+++..... ....+.++.+..+...+..+++.|+|+++++.. ...+...+.... ++..+.
T Consensus 70 ~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~a~~~~~~~l~~G~t~vr~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 145 (391)
T PRK05985 70 YPNEPGPSLRERIANERR--RRAASGHPAAERALALARAAAAAGTTAMRSHVDVDPDAGLRHLEAVLAARET--LRGLID 145 (391)
T ss_pred ccCCCCCCHHHHHHHHHH--hhccchhHHHHHHHHHHHHHHhcCcceEEeeEccCCCcccchHHHHHHHHHH--hhCccc
Confidence 11223333221100 123455566777777889999999999987531 123344444333 322111
Q ss_pred cccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCc
Q 015784 168 QSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (400)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~ 247 (400)
...... +.......+. ..+.+++...... .+...+.++.....+++.+.++++.|+++|+++++|+.+..
T Consensus 146 ~~~v~~----~~~g~~~~~~-----~~~ll~~~l~~g~-~~~gg~~p~~~~~~~~~~l~~~~~~A~~~g~~i~~Hv~e~~ 215 (391)
T PRK05985 146 IQIVAF----PQSGVLSRPG-----TAELLDAALRAGA-DVVGGLDPAGIDGDPEGQLDIVFGLAERHGVGIDIHLHEPG 215 (391)
T ss_pred EEEEec----cCccccCCcC-----HHHHHHHHHHcCC-CEEeCCCCCCcCCCHHHHHHHHHHHHHHhCCCcEEeeCCCC
Confidence 111111 1111100100 1133333332222 23444456666777889999999999999999999998765
Q ss_pred hhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC---h----hHHHHHHhcCCeEEECccccccccCcccHHHHH
Q 015784 248 YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN---H----TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEML 320 (400)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~---~----~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 320 (400)
........ ..++.....+..+ +..+.|+..+. + ++++++++.|+.+++|+... .+.+|+++|+
T Consensus 216 d~~~~~~~------~~~e~~~~~g~~~-~~~i~H~~~l~~~~~~~~~~~i~~lae~g~~v~~~~~~~---~~~~~~~~l~ 285 (391)
T PRK05985 216 ELGAFQLE------RIAARTRALGMQG-RVAVSHAFCLGDLPEREVDRLAERLAEAGVAIMTNAPGS---VPVPPVAALR 285 (391)
T ss_pred CccHHHHH------HHHHHHHHhCCCC-CEehhhhhhhhcCCHHHHHHHHHHHHHcCCeEEEeCCCC---CCCCCHHHHH
Confidence 42211110 0334444555433 67889998753 2 55799999999998885432 6788999999
Q ss_pred HcCCcEEEcCCCCC----CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCcccccc
Q 015784 321 HADICVSLGTDGAP----SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEA 396 (400)
Q Consensus 321 ~~Gv~v~~gtD~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~ 396 (400)
++|+++++|||++. +..+.+++..++.+....... .. -+++++|+++|.|||+++|+++ ++|++
T Consensus 286 ~~Gv~v~lGtD~~~~~~~p~~~~~~~~~~~~~~~~~~~~--------~~--~~~~~al~~~T~~~A~~lg~~~--~~l~~ 353 (391)
T PRK05985 286 AAGVTVFGGNDGIRDTWWPYGNGDMLERAMLIGYRSGFR--------TD--DELAAALDCVTHGGARALGLED--YGLAV 353 (391)
T ss_pred HCCCeEEEecCCCCCCCcCCCCCcHHHHHHHHHHHHccC--------Ch--HHHHHHHHHHcchhHHHhCCcc--cCCCC
Confidence 99999999999853 224567887777654433211 11 2468999999999999999986 35999
Q ss_pred CcCC
Q 015784 397 GKKV 400 (400)
Q Consensus 397 G~~A 400 (400)
||.|
T Consensus 354 G~~A 357 (391)
T PRK05985 354 GARA 357 (391)
T ss_pred CCcC
Confidence 9987
No 37
>TIGR02033 D-hydantoinase D-hydantoinase. This model represents the D-hydantoinase (dihydropyrimidinase) which primarily converts 5,6-dihydrouracil to 3-ureidopropanoate but also acts on dihydrothymine and hydantoin. The enzyme is a metalloenzyme.
Probab=100.00 E-value=2.3e-32 Score=260.08 Aligned_cols=326 Identities=17% Similarity=0.215 Sum_probs=204.7
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|+++++ ..+++|+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+....
T Consensus 1 ~li~n~~vv~~~~----~~~~~V~I~dg~I~~Ig~~~~~-----~~~~~vIDa~G~~vlPGlID~H~H~~~~~------- 64 (454)
T TIGR02033 1 KLIRGGTVVNADD----VFQADVLIEGGKIVAVGRNLSP-----PDAVEEIDATGKYVMPGGIDVHTHLEMPF------- 64 (454)
T ss_pred CEEECcEEEcCCC----ceEEEEEEECCEEEEecCCCCC-----CCCCcEEECCCCEEecCEecceeccCccc-------
Confidence 4799999998653 2568999999999999975321 12358999999999999999999996511
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC----HHHHHHHHHHcCCeEEEecccccCCCC
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH----VSEMAKAVELLGLRACLVQSTMDCGEG 176 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~ 176 (400)
....+.++.+..+ +.++++|||++.+++... .....+........ ....+.+..
T Consensus 65 --------------~~~~~~e~~~~~s----~~a~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 122 (454)
T TIGR02033 65 --------------GGTVTADDFFTGT----KAAAAGGTTTIIDFALPHKGESLTEALETWHEKAEG----KSVIDYGFH 122 (454)
T ss_pred --------------CCCCCcchHHHHH----HHHHhCCCCEEEeCcCCCCCCCHHHHHHHHHHHhcc----CceEEEEEE
Confidence 0122334444443 457789999999986322 22223322222111 111111100
Q ss_pred CCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhh
Q 015784 177 LPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256 (400)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~ 256 (400)
..... ..........+. +...+...++.+..++..+..+++.+.++++.+++.++++++|+ |+........+.
T Consensus 123 ~~~~~---~~~~~~~~~~~~---~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~-E~~~~~~~~~~~ 195 (454)
T TIGR02033 123 MMITH---WNDEVLEEHIPE---LVEEGITSFKVFMAYKNLLMVDDEELFEILKRAKELGALLQVHA-ENGDVIAELQAR 195 (454)
T ss_pred ecccC---CcHHHHHHHHHH---HHhcCCcEEEEEeecCCCCCCCHHHHHHHHHHHHhCCCeEEEEc-CCHHHHHHHHHH
Confidence 00000 011112222222 22233345777777777788899999999999999999999997 665544322222
Q ss_pred c---CCCC-------Ch-------HH-HHhHhCCCCCCeeeEEecCC-ChhHHHHHHhcCCe--EEECccccc-------
Q 015784 257 R---KVDH-------GT-------VT-FLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVK--VSHCPASAM------- 308 (400)
Q Consensus 257 ~---~~~~-------~~-------~~-~l~~~~~~~~~~~~~h~~~~-~~~~i~~~~~~~~~--~~~~p~~~~------- 308 (400)
+ +... ++ ++ .+...+..+.+..+.|.... +-++++.+++.|+. +.+||.+++
T Consensus 196 ~~~~G~~~~~~~~~~~p~~~e~~~v~~~~~~~~~~~~~~~i~H~s~~~~~~~i~~~~~~g~~vt~e~~p~~l~~~~~~~~ 275 (454)
T TIGR02033 196 LLAQGKTGPEYHALSRPPESEAEAVARAIALAALANAPLYVVHVSTASAVDEIAEAREKGQPVYGETCPQYLLLDDTIYD 275 (454)
T ss_pred HHHcCCCChhHhhhcCCHHHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCchheeecHHHhc
Confidence 1 2100 11 11 13333455667777777762 24678888888844 669998753
Q ss_pred ----cc-cCc--cc---------HHHHHHcCCcEEEcCCCCCCCC----------------CCCHHHHHHHHHHHhcccc
Q 015784 309 ----RM-LGF--AP---------IKEMLHADICVSLGTDGAPSNN----------------RMSIVDEMYLASLINKGRE 356 (400)
Q Consensus 309 ----~~-~~~--~~---------~~~~~~~Gv~v~~gtD~~~~~~----------------~~~~~~~~~~~~~~~~~~~ 356 (400)
+. .+. +| +..++++|+.+++|||+.+++. +...+ ++.+...+.+..
T Consensus 276 ~~~~~~~~~~~~pPlr~~~~~~~l~~~l~~G~i~~igtDh~p~~~~~k~~~~~~~~~~~~~G~~g~-e~~l~~l~~~~v- 353 (454)
T TIGR02033 276 KPGFEGAKYVCSPPLREKEDQDALWSALSSGALQTVGSDHCPFNFAQKKAIGKDDFTKIPNGGPGV-EERMTLLFDEGV- 353 (454)
T ss_pred CcccccceeEECCCCCChhhHHHHHHHhhcCCeEEEECCCCCCCHHHhhhcccCCHhhCCCCCchH-HhHHHHHHHHHH-
Confidence 22 122 46 4589999999999999987631 11112 555555443221
Q ss_pred cccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 357 VFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 357 ~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....++++++++++|.|||++||+++++|+|++|+.|
T Consensus 354 -------~~~~~~~~~~~~~~t~~pa~~~gl~~~~G~l~~G~~A 390 (454)
T TIGR02033 354 -------ATGRITLEKFVELTSTNPAKIFNMYPRKGTIAVGSDA 390 (454)
T ss_pred -------HcCCCCHHHHHHHHhhHHHHHcCCCCCCCccccCCcC
Confidence 1234899999999999999999997768999999987
No 38
>COG1228 HutI Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.7e-33 Score=253.73 Aligned_cols=337 Identities=20% Similarity=0.252 Sum_probs=209.2
Q ss_pred CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCCh-hhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccc
Q 015784 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSA-DILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~-~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~ 95 (400)
....+++.+++.+++ ...++++.|+|+||||+.||+.. +. +.+.++||++|++|+|||||+|+|+.....+
T Consensus 8 ~~~~~~~~~~~~~~~---~~~i~~~~v~i~~GkI~~vg~~~~~~-----~~~~~viD~~G~~V~PGLID~HtHl~~~~~~ 79 (406)
T COG1228 8 NIAMLATLAGRGLPG---LGIIEDGAVLIEDGKIVAVGPEEIDI-----PAGAEVIDAKGKTVTPGLIDAHTHLGFGGSR 79 (406)
T ss_pred hhhhheeeccccCCC---cceeecceEEEECCEEEEecCcccCC-----CCCCeEEeCCCCEEccceeeccccccccCCc
Confidence 345678888888864 34567799999999999999873 32 2357999999999999999999999875544
Q ss_pred ccc-----CCCChhHhhh--hccccccCCCCh---hhHHHHHHHHHHHHHhcCcceeeccCcCCHHH-----HHHHHHHc
Q 015784 96 GIA-----DDVDLMTWLH--DRIWPYESNMTE---EDSYISTLLCGIELIHSGVTCFAEAGGQHVSE-----MAKAVELL 160 (400)
Q Consensus 96 ~~~-----~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~-----~~~~~~~~ 160 (400)
... .+.++...+. +..++....+.. ..........+..++.+|+|+........... ..+.....
T Consensus 80 ~~~~~~~~~~~~~~~i~~~~~gi~~~~~~~~~a~~~g~~~~~~~~l~~~~~~g~~~~e~~~~~g~~~~~e~~~~~~~~~~ 159 (406)
T COG1228 80 GGEFELREAGASYTEILAAGGGILPLDRGFTTARDGGLKATALPRLKRAGSAGVTTGERKSGYGLDLETEGGHLRAAAGL 159 (406)
T ss_pred cchhhhcccCccHHHHHHhcCChhhhHHHHHHHhhcchHHHHHHHHHHHHHcCCcccceeeeecccccccccccchhhhc
Confidence 321 1223332222 122222222111 12222344456778889999988754322211 11111111
Q ss_pred C--CeEEEecccccCCCCCCcccccCCchHHHHHHHHH-HHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCC
Q 015784 161 G--LRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKEL-YAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT 237 (400)
Q Consensus 161 g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~ 237 (400)
+ .......... .....+. ... .....+...... ++..... +.....-........++++++++++.+++.++
T Consensus 160 ~~~~~~~~~~t~~-~~~~~~~-~~~-~~r~~~~~g~~~~i~~~a~~--~l~~~~d~~~~~~~fs~~e~~~~l~~a~~~g~ 234 (406)
T COG1228 160 KESRPVAVGSTPL-AAHGVPE-ERK-ATREAYVAGARLLIKIVATG--GLASFVDAFCEGGQFSPEEIRAVLAAALKAGI 234 (406)
T ss_pred cccccccccCccc-cccCCcc-ccc-chHHHHHHHHHHHHHHHHhc--cccchhhccccccccCHHHHHHHHHHHHHCCC
Confidence 1 1111111111 1111111 111 122222222222 3333321 11111111334456788889999999999999
Q ss_pred eeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHh--cCC-eEEECccccccc--cC
Q 015784 238 GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSR--AGV-KVSHCPASAMRM--LG 312 (400)
Q Consensus 238 ~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~--~~~-~~~~~p~~~~~~--~~ 312 (400)
++.+|+.+.+. +....+.+. ..+.|+..++.+.++.+++ .|+ ..+..|...+.+ ..
T Consensus 235 ~v~~HA~~~~g---------------~~~A~~~g~----~s~~H~~~ld~~~~~~~a~~~~g~~~~~l~p~~~~~l~e~~ 295 (406)
T COG1228 235 PVKAHAHGADG---------------IKLAIRLGA----KSAEHGTLLDHETAALLAEKGAGTPVPVLLPRTKFELRELD 295 (406)
T ss_pred ceEEEecccch---------------HHHHHHhCc----ceehhhhhcCHhHHHHHhhccCCCccccccchhhhhhhccc
Confidence 99999987662 122223332 2378999999999999999 776 346666665555 44
Q ss_pred cccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCcc
Q 015784 313 FAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIG 392 (400)
Q Consensus 313 ~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G 392 (400)
..+++.|++.||+++++||+++.+...++..+|..++. .++|++|||+++|.|||++||+++++|
T Consensus 296 ~~~~~~l~~~GV~vai~TD~~~~~~~~~l~~~m~l~~~---------------~gmtp~EaL~a~T~naA~alG~~~~~G 360 (406)
T COG1228 296 YKPARKLIDAGVKVAIGTDHNPGTSHGSLALEMALAVR---------------LGMTPEEALKAATINAAKALGLADKVG 360 (406)
T ss_pred chhHHHHHHCCCEEEEEcCCCCCchhhHHHHHHHHHHH---------------cCCCHHHHHHHHHHHHHHHcCCccccc
Confidence 67899999999999999999877323344444444442 249999999999999999999999999
Q ss_pred ccccCcCC
Q 015784 393 SLEAGKKV 400 (400)
Q Consensus 393 ~i~~G~~A 400 (400)
+|++||.|
T Consensus 361 sle~Gk~A 368 (406)
T COG1228 361 SLEPGKDA 368 (406)
T ss_pred cccCCCcc
Confidence 99999987
No 39
>PRK07583 cytosine deaminase-like protein; Validated
Probab=100.00 E-value=7.6e-31 Score=246.76 Aligned_cols=347 Identities=18% Similarity=0.150 Sum_probs=215.9
Q ss_pred CCCCcccEEEEecEEEeecCCC--------ceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeeccccc
Q 015784 14 SLGSSSTMILHNAVIVTMDKES--------RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNT 85 (400)
Q Consensus 14 ~~~~~~~~li~n~~i~~~~~~~--------~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~ 85 (400)
+.+++..++|+|+++-+..... .-....+|.|+||+|++|++.... ..+.++||++|++|+|||||+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~dg~i~~i~~~~~~-----~~~~~~id~~g~~v~Pg~id~ 80 (438)
T PRK07583 6 SLPESGRYWLKNARVPAALLEGGVPPGDTLEGLVLVDIEIADGKIAAILPAGGA-----PDELPAVDLKGRMVWPCFVDM 80 (438)
T ss_pred cCCCCCcEEEeccccccccccCccCCCcCCCCcEEEEEEEECCEEEEEecCCCC-----CCCCceecCCCCcccCCcccc
Confidence 4556778999999975433221 122456999999999999986431 125689999999999999999
Q ss_pred CcCCcccccccc--cCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC----c---CCHHHHHHH
Q 015784 86 HVHTSQQLAKGI--ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG----G---QHVSEMAKA 156 (400)
Q Consensus 86 H~H~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~----~---~~~~~~~~~ 156 (400)
|+|+........ ....++.+.+..........++.++...........++..|+|+++... . ...+...+.
T Consensus 81 H~Hld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~a~~~Gtt~vRt~vd~~~~~~~~~~~~i~~~ 160 (438)
T PRK07583 81 HTHLDKGHIWPRSPNPDGTFPGALDAVTADREAHWSAEDLYRRMEFGLRCAYAHGTSAIRTHLDSFAPQAAISWEVFAEL 160 (438)
T ss_pred eeccccceecCCCCCCCCCHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhChhhEEeeeccCCCCcccHHHHHHHH
Confidence 999977654432 1223344332211100011233455445555677889999999665422 1 112223233
Q ss_pred HHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcC
Q 015784 157 VELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK 236 (400)
Q Consensus 157 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~ 236 (400)
.+...-+....-..+ ++.+....... .+..+.+.+ . .+.+.. .+... ...++.+.++++.|+++|
T Consensus 161 ~~~~~~~~~~~~v~~-----~p~~~~~~~~~---~eL~~~v~~---~-~gv~g~--~~~~~-~~~d~~l~~i~~lA~~~G 225 (438)
T PRK07583 161 REAWAGRIALQAVSL-----VPLDAYLTDAG---ERLADLVAE---A-GGLLGG--VTYMN-PDLDAQLDRLFRLARERG 225 (438)
T ss_pred HHHhhccCeEEEEEe-----cChhhccCchH---HHHHHHHHH---c-CCEEeC--CCCCC-CCHHHHHHHHHHHHHHhC
Confidence 333222211111110 11111111111 222222222 1 122221 11111 125678999999999999
Q ss_pred CeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC-------hhHHHHHHhcCCeEEECcccccc
Q 015784 237 TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN-------HTEIGLLSRAGVKVSHCPASAMR 309 (400)
Q Consensus 237 ~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~-------~~~i~~~~~~~~~~~~~p~~~~~ 309 (400)
+++.+|+.+........... ..+.+...+.. .+.++.|+..++ .++++++++.|+.+++||.+++.
T Consensus 226 ~~v~vH~~E~~~~~~~~l~~------~~~~~~~~G~~-~~v~i~H~~~l~~~~~~~~~~~i~~la~~gv~vv~~P~~~~~ 298 (438)
T PRK07583 226 LDLDLHVDETGDPASRTLKA------VAEAALRNGFE-GKVTCGHCCSLAVQPEEQAQATIALVAEAGIAIVSLPMCNLY 298 (438)
T ss_pred CCcEEeECCCCCchHHHHHH------HHHHHHHhCCC-CCEEEEeccchhcCCHHHHHHHHHHHHHcCCeEEECcchhhh
Confidence 99999998765432221111 23444455553 368899999876 46799999999999999998864
Q ss_pred c-----------cCcccHHHHHHcCCcEEEcCCCCC----CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 015784 310 M-----------LGFAPIKEMLHADICVSLGTDGAP----SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 374 (400)
Q Consensus 310 ~-----------~~~~~~~~~~~~Gv~v~~gtD~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al 374 (400)
+ .+..|+++|+++|+++++|||+.. +....+++..+..+....+ .+.+++++|
T Consensus 299 l~~~~~~~~p~~~~~~~v~~l~~aGV~valGtD~~~d~~~p~g~~~~~~~~~~a~~~~~------------~~~~~~~al 366 (438)
T PRK07583 299 LQDRQPGRTPRWRGVTLVHELKAAGIPVAVASDNCRDPFYAYGDHDMLEVFREAVRILH------------LDHPYDDWP 366 (438)
T ss_pred hcCCCcCCCCCCCCcchHHHHHHCCCeEEEEeCCCCCCCCCCCCcCHHHHHHHHHHHHh------------cCCcHHHHH
Confidence 4 244689999999999999999842 1134677777776654332 136899999
Q ss_pred HHHhHHHHHHcCCCCCccccccCcCC
Q 015784 375 RMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 375 ~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+++|.|||+++|+++ +|+|++|+.|
T Consensus 367 ~~~T~~~A~~lg~~~-~G~i~~G~~A 391 (438)
T PRK07583 367 AAVTTTPADIMGLPD-LGRIAVGAPA 391 (438)
T ss_pred HHHhHHHHHHcCCCC-CCCcCCCCCC
Confidence 999999999999987 7999999987
No 40
>PRK12394 putative metallo-dependent hydrolase; Provisional
Probab=100.00 E-value=8.9e-31 Score=242.09 Aligned_cols=311 Identities=14% Similarity=0.159 Sum_probs=198.5
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
.+++|+|++|+++.. ....+.+|+|+||+|++|++... ....++||++|++|+|||||+|+|+......
T Consensus 3 ~~~li~~~~i~~~~~--~~~~~~~i~i~~g~I~~i~~~~~------~~~~~viD~~g~~v~PGliD~H~H~~~~g~~--- 71 (379)
T PRK12394 3 NDILITNGHIIDPAR--NINEINNLRIINDIIVDADKYPV------ASETRIIHADGCIVTPGLIDYHAHVFYDGTE--- 71 (379)
T ss_pred ccEEEECcEEECCCC--CcccccEEEEECCEEEEEcCCCC------CCCCeEEECCCCEEECCEEEeeecCCCCCcc---
Confidence 468999999996542 23456789999999999987432 1245899999999999999999999531100
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC---HHHH---HHHHHHcCCeEEEeccccc
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEM---AKAVELLGLRACLVQSTMD 172 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~---~~~~---~~~~~~~g~~~~~~~~~~~ 172 (400)
...+++ ..++++|+|++.+++... .... .....+.+++.++......
T Consensus 72 -----------------~~~~~~----------~~~l~~G~Ttv~d~g~~~~~~~~~~~~~~~a~~~~gira~l~~~~~~ 124 (379)
T PRK12394 72 -----------------GGVRPD----------MYMPPNGVTTVVDAGSAGTANFDAFYRTVICASKVRIKAFLTVSPPG 124 (379)
T ss_pred -----------------cccCHH----------HHHHhCCccEEEECCCCCcccHHHHHHHHhhhhcceeeeEEeeeccc
Confidence 011111 237889999999986321 2222 2235666788777655442
Q ss_pred CCCCCCcccccCCch-HHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhh
Q 015784 173 CGEGLPASWAVRTTD-DCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQ 251 (400)
Q Consensus 173 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~ 251 (400)
... .......... ....+..++++.+..... .+++.+.+......+++.+.+.++.|++.|+++++|+.+...+..
T Consensus 125 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~ki~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~~~ 201 (379)
T PRK12394 125 QTW--SGYQENYDPDNIDENKIHALFRQYRNVLQ-GLKLRVQTEDIAEYGLKPLTETLRIANDLRCPVAVHSTHPVLPMK 201 (379)
T ss_pred ccc--cCcccccChhHCCHHHHHHHHHHCcCcEE-EEEEEEecccccccchHHHHHHHHHHHHcCCCEEEEeCCCCccHH
Confidence 211 0000000111 113445555555443221 123322222212567889999999999999999999987654321
Q ss_pred HHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC------C-----hhHHHHHHhcCCeE-EECccccccccCcccHHHH
Q 015784 252 VVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV------N-----HTEIGLLSRAGVKV-SHCPASAMRMLGFAPIKEM 319 (400)
Q Consensus 252 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~------~-----~~~i~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~ 319 (400)
+..+.+....++.|+.+. + .++++.+++.|+.+ +.++.++. ......++
T Consensus 202 ----------------~~~~~l~~g~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~g~s~~---~~~~~~~~ 262 (379)
T PRK12394 202 ----------------ELVSLLRRGDIIAHAFHGKGSTILTEEGAVLAEVRQARERGVIFDAANGRSHF---DMNVARRA 262 (379)
T ss_pred ----------------HHHHhcCCCCEEEecCCCCCCCcCCCCCCChHHHHHHHhCCeEEEecCCcccc---chHHHHHH
Confidence 223334444567888762 2 34677788899876 66665543 22345688
Q ss_pred HHcCC-cEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCc
Q 015784 320 LHADI-CVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGK 398 (400)
Q Consensus 320 ~~~Gv-~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~ 398 (400)
+++|+ ++++|||+.+++...+++..|.... .+.. +.+++++++++++|.|||+++|+++++|+|++|+
T Consensus 263 l~~G~~~~~lgTD~~~~~~~~~~~~~l~~~~--~~~~---------~~~~~~~~~~~~at~~~a~~~g~~~~~G~i~~G~ 331 (379)
T PRK12394 263 IANGFLPDIISSDLSTITKLAWPVYSLPWVL--SKYL---------ALGMALEDVINACTHTPAVLMGMAAEIGTLAPGA 331 (379)
T ss_pred HHCCCCceEEECCCCCCCcccCccchHHHHH--HHHH---------HcCCCHHHHHHHHHHHHHHHhCCCCCCCccCCCC
Confidence 99995 9999999987644334433333322 1111 3469999999999999999999975579999999
Q ss_pred CC
Q 015784 399 KV 400 (400)
Q Consensus 399 ~A 400 (400)
.|
T Consensus 332 ~A 333 (379)
T PRK12394 332 FA 333 (379)
T ss_pred cc
Confidence 87
No 41
>PRK08323 phenylhydantoinase; Validated
Probab=100.00 E-value=1.6e-31 Score=254.44 Aligned_cols=323 Identities=17% Similarity=0.185 Sum_probs=201.3
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+++|+|++|+++++ +.+++|+|+||+|++|++. . +.++||++|++|+|||||+|+|+...
T Consensus 2 d~li~n~~v~~~~~----~~~~~v~I~~g~I~~i~~~-~--------~~~viD~~g~~v~PGlID~H~H~~~~------- 61 (459)
T PRK08323 2 STLIKNGTVVTADD----TYKADVLIEDGKIAAIGAN-L--------GDEVIDATGKYVMPGGIDPHTHMEMP------- 61 (459)
T ss_pred cEEEECCEEEcCCC----ceEEEEEEECCEEEEEecC-C--------CceEEECCCCEEeccEEeeeeccccc-------
Confidence 58999999998542 3468999999999999874 1 35899999999999999999999541
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC----CHHHHHHHHHHcCCeEEEecccccCCC
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGE 175 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~ 175 (400)
.......++.+..+ +.++++|+|++.++... ......+........ ....+.+.
T Consensus 62 --------------~~~~~~~e~~~~~~----~~a~~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~d~~~ 119 (459)
T PRK08323 62 --------------FGGTVSSDDFETGT----RAAACGGTTTIIDFALQPKGQSLREALEAWHGKAAG----KAVIDYGF 119 (459)
T ss_pred --------------cCCccccCcHHHHH----HHHHhCCCCEEEeCcCCCCCCChHHHHHHHHHHhcc----CceEEEEE
Confidence 00111233333332 45778999999997522 122222222221110 00111110
Q ss_pred CCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhh
Q 015784 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255 (400)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~ 255 (400)
..... ......+.+..+++ ..+...+++++.++..+..+++.+.++++.++++|+++++|+ ++........+
T Consensus 120 ~~~~~---~~~~~~~~~~~~~~----~~g~~~ik~~~~~~~~~~~s~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~ 191 (459)
T PRK08323 120 HMIIT---DWNEVVLDEMPELV----EEGITSFKLFMAYKGALMLDDDELLRALQRAAELGALPMVHA-ENGDAIAYLQA 191 (459)
T ss_pred EEEec---CCcHHHHHHHHHHH----HcCCCEEEEEEecCCCCCCCHHHHHHHHHHHHhcCCEEEEEc-CChHHHHHHHH
Confidence 00000 01112223333332 222235777666666678899999999999999999999996 65554433222
Q ss_pred hc---CC-------CCChHH--------HHhHhCCCCCCeeeEEecCC-ChhHHHHHHhcCCe--EEECcc------ccc
Q 015784 256 TR---KV-------DHGTVT--------FLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVK--VSHCPA------SAM 308 (400)
Q Consensus 256 ~~---~~-------~~~~~~--------~l~~~~~~~~~~~~~h~~~~-~~~~i~~~~~~~~~--~~~~p~------~~~ 308 (400)
.+ +. ..++.+ .+...+..+.+..+.|.... +-++++.+++.|+. +.+||. +++
T Consensus 192 ~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~~a~~~~~~~~i~H~s~~~~~~~i~~ak~~g~~vt~e~~p~~l~l~~~~~ 271 (459)
T PRK08323 192 KLLAEGKTGPEYHALSRPPEVEGEATNRAIMLAELAGAPLYIVHVSCKEALEAIRRARARGQRVFGETCPQYLLLDESEY 271 (459)
T ss_pred HHHHcCCCChhhhhccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCeEEEEcCccceeecHHHh
Confidence 21 11 001221 24444666677777787764 33467777888866 458988 444
Q ss_pred cc-c---Cc-----cc---------HHHHHHcCCcEEEcCCCCCCCCCCCHH---------------HHHHHHHHHhccc
Q 015784 309 RM-L---GF-----AP---------IKEMLHADICVSLGTDGAPSNNRMSIV---------------DEMYLASLINKGR 355 (400)
Q Consensus 309 ~~-~---~~-----~~---------~~~~~~~Gv~v~~gtD~~~~~~~~~~~---------------~~~~~~~~~~~~~ 355 (400)
+. . +. +| +.+++++|+.+++|||+.+++...+.+ .+++....+....
T Consensus 272 ~~~~~~~g~~~k~~pPlr~~~~~~~l~~~l~~G~i~~i~sDh~p~~~~~~~~~~~~~~~~~p~G~~~~e~~~~~l~~~~~ 351 (459)
T PRK08323 272 DGPDWFEGAKYVMSPPLRDKEHQDALWRGLQDGDLQVVATDHCPFCFEQKKQLGRGDFTKIPNGTPGVEDRMPLLFSEGV 351 (459)
T ss_pred cCCccccccceEECCCCCChHHHHHHHHHhhcCCeeEEECCCCCCChHHhcccccCCHhhCCCCcchHhhhHHHHHHHHH
Confidence 33 1 21 33 668899999999999998764322221 3444444342211
Q ss_pred ccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 356 EVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 356 ~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....++++++++++|.|||++||+.++.|+|++|+.|
T Consensus 352 --------~~~~~~~~~~~~~~t~~pA~~lgl~~~~G~l~~G~~A 388 (459)
T PRK08323 352 --------MTGRITLNRFVELTSTNPAKIFGLYPRKGTIAVGADA 388 (459)
T ss_pred --------HcCCCCHHHHHHHHhhHHHHHhCCCCCCcccCCCCcC
Confidence 1234899999999999999999996667999999987
No 42
>cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=100.00 E-value=3.5e-31 Score=242.89 Aligned_cols=279 Identities=19% Similarity=0.192 Sum_probs=185.3
Q ss_pred cEEeCCCcEeeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC
Q 015784 69 QIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ 148 (400)
Q Consensus 69 ~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~ 148 (400)
++||++|++|||||||+|+|+..... ....+ ...+++............++.+||||+++++..
T Consensus 2 ~vID~~g~~v~PGliD~H~Hl~~~~~-------~~~~~---------~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~g~~ 65 (342)
T cd01299 2 QVIDLGGKTLMPGLIDAHTHLGSDPG-------DLPLD---------LALPVEYRTIRATRQARAALRAGFTTVRDAGGA 65 (342)
T ss_pred cEEeCCCCEECCCeeeeeeeccccCC-------Ccccc---------ccCCHHHHHHHHHHHHHHHHhCCCcEEEeCCCc
Confidence 68999999999999999999855211 00000 011223333344456688999999999999854
Q ss_pred CHHHHHHHHHHcCCeEEEecccccCCCCCC-----cccc----------cCCchHHHHHHHHHHHHhccCCCCCeEEEee
Q 015784 149 HVSEMAKAVELLGLRACLVQSTMDCGEGLP-----ASWA----------VRTTDDCIQSQKELYAKHHHAADGRIRIWFG 213 (400)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-----~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (400)
.... .+.....+.. .++.++..|+.+. ..+. .........+..+.++++...+.+.+|++..
T Consensus 66 ~~~~-~~~~~~~g~~--~gPr~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G~~~iK~~~~ 142 (342)
T cd01299 66 DYGL-LRDAIDAGLI--PGPRVFASGRALSQTGGHGDPRGLSGLFPAGGLAAVVDGVEEVRAAVREQLRRGADQIKIMAT 142 (342)
T ss_pred chHH-HHHHHHcCCc--cCCceeecchhhcccCCCCccccccccccccCCcceecCHHHHHHHHHHHHHhCCCEEEEecc
Confidence 3332 3334444331 1222222221110 0000 0011122334445555555566778888764
Q ss_pred ccc--------cccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC
Q 015784 214 IRQ--------IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV 285 (400)
Q Consensus 214 ~~~--------~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~ 285 (400)
... ...++++.+..+++.|++.|+++.+|+.+... ++...+.+. ..++|+..+
T Consensus 143 g~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~---------------i~~~l~~G~----~~i~H~~~~ 203 (342)
T cd01299 143 GGVLSPGDPPPDTQFSEEELRAIVDEAHKAGLYVAAHAYGAEA---------------IRRAIRAGV----DTIEHGFLI 203 (342)
T ss_pred CCcCCCCCCCcccCcCHHHHHHHHHHHHHcCCEEEEEeCCHHH---------------HHHHHHcCC----CEEeecCCC
Confidence 221 12578899999999999999999999975432 222223332 358999999
Q ss_pred ChhHHHHHHhcCCeEEECcccccc---------------------c-cCcccHHHHHHcCCcEEEcCCCCC-CCCCCCHH
Q 015784 286 NHTEIGLLSRAGVKVSHCPASAMR---------------------M-LGFAPIKEMLHADICVSLGTDGAP-SNNRMSIV 342 (400)
Q Consensus 286 ~~~~i~~~~~~~~~~~~~p~~~~~---------------------~-~~~~~~~~~~~~Gv~v~~gtD~~~-~~~~~~~~ 342 (400)
+++++++++++|+.++.||.++.. + .+..++++++++||++++|||++. ......++
T Consensus 204 ~~~~~~~l~~~g~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~GTD~~~~~~~~~~~~ 283 (342)
T cd01299 204 DDETIELMKEKGIFLVPTLATYEALAAEGAAPGLPADSAEKVALVLEAGRDALRRAHKAGVKIAFGTDAGFPVPPHGWNA 283 (342)
T ss_pred CHHHHHHHHHCCcEEeCcHHHHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCchhHHH
Confidence 999999999999999999986532 1 234678999999999999999874 22344566
Q ss_pred HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 343 DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.++..... .+++++++|+++|.|||+++|+++++|+|++||.|
T Consensus 284 ~e~~~~~~---------------~~~~~~~al~~~T~~~a~~~g~~~~~G~i~~G~~A 326 (342)
T cd01299 284 RELELLVK---------------AGGTPAEALRAATANAAELLGLSDELGVIEAGKLA 326 (342)
T ss_pred HHHHHHHH---------------hCCCHHHHHHHHHHHHHHHhCccCCcceECCCCcC
Confidence 66665432 24899999999999999999998889999999987
No 43
>cd01300 YtcJ_like YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.
Probab=99.97 E-value=7.6e-30 Score=243.88 Aligned_cols=171 Identities=21% Similarity=0.191 Sum_probs=130.6
Q ss_pred ccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHH-HHhHhCCCCCCeeeEEecCCChhHHHHHHhc
Q 015784 218 MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVT-FLDKIEFLQNNLLSAHTVWVNHTEIGLLSRA 296 (400)
Q Consensus 218 ~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~ 296 (400)
..++++.+.++++.|++.|+++++|+.++..... ..+ .++ .....+..+.+++++|+..+++++++++++.
T Consensus 290 ~~~~~e~l~~~~~~a~~~g~~v~~Ha~gd~~i~~-~l~-------~~~~~~~~~g~~~~r~~i~H~~~~~~~~~~~l~~~ 361 (479)
T cd01300 290 LLISPEELEELVRAADEAGLQVAIHAIGDRAVDT-VLD-------ALEAALKDNPRADHRHRIEHAQLVSPDDIPRFAKL 361 (479)
T ss_pred ccCCHHHHHHHHHHHHHCCCCEEEEEecHHHHHH-HHH-------HHHHHHHhcCCCCCCceeeecccCCHHHHHHHHHc
Confidence 4568899999999999999999999986543222 221 221 2233455567899999999999999999999
Q ss_pred CCeEEECcccccc---------c-----cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCC
Q 015784 297 GVKVSHCPASAMR---------M-----LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGT 362 (400)
Q Consensus 297 ~~~~~~~p~~~~~---------~-----~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (400)
|+.+++||.+... + ....|++.++++|+++++|||++..+ .+++..+..+.......... ..
T Consensus 362 gv~~~~~P~~~~~~~~~~~~~~lg~~~~~~~~p~~~~~~~Gv~v~lGSD~~~~~--~~p~~~~~~av~~~~~~~~~--~~ 437 (479)
T cd01300 362 GVIASVQPNHLYSDGDAAEDRRLGEERAKRSYPFRSLLDAGVPVALGSDAPVAP--PDPLLGIWAAVTRKTPGGGV--LG 437 (479)
T ss_pred CCceEeCcccccCchHHHHHhcccHHHHhcCchHHHHHHCCCeeeccCCCCCCC--CCHHHHHHHHheeeCCCCCC--CC
Confidence 9999999986531 1 34678999999999999999997542 67887777765432211000 00
Q ss_pred CCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 363 TDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 363 ~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
...+++|++++|+++|.|||+++|+++++|+|++||.|
T Consensus 438 ~~~~~ls~~~al~~~T~~~A~~lg~e~~~GsLe~Gk~A 475 (479)
T cd01300 438 NPEERLSLEEALRAYTIGAAYAIGEEDEKGSLEPGKLA 475 (479)
T ss_pred CccccCCHHHHHHHHHHHHHHHhccccccccccCCccc
Confidence 13467999999999999999999999989999999987
No 44
>cd01305 archeal_chlorohydrolases Predicted chlorohydrolases. These metallo-dependent hydrolases from archea are part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. They have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. Some members of this subgroup are predicted to be chlorohyrolases.
Probab=99.97 E-value=1.1e-30 Score=229.77 Aligned_cols=256 Identities=20% Similarity=0.276 Sum_probs=195.8
Q ss_pred EeeecccccCcCCcccccccccCCCChhHhh---hhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC---CH
Q 015784 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWL---HDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HV 150 (400)
Q Consensus 77 ~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~---~~ 150 (400)
+|||||||+|.|+.++.+|+...+.++.+|+ .+..|+....+++++.+..++..+.++++.|+|++.|+... ..
T Consensus 1 ~v~PG~vn~H~H~~~~~~rg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~ 80 (263)
T cd01305 1 ILIPALVNAHTHLGDSAIKEVGDGLPLDDLVAPPDGLKHRLLAQADDRELAEAMRKVLRDMRETGIGAFADFREGGVEGI 80 (263)
T ss_pred CccccceeccccHHHHHhhcCCCCCcHHHHhcCcccchHHHHHhCCHHHHHHHHHHHHHHHHhcCCeEEEEccCcchhHH
Confidence 5899999999999999999998888888866 33455666789999999999999999999999999997522 35
Q ss_pred HHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHH
Q 015784 151 SEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRD 230 (400)
Q Consensus 151 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ 230 (400)
+...++.++.|+|. ...+.. +. . .... .+ +. . +...++++.....+ ++++++
T Consensus 81 ~a~~~a~~~~g~r~---~~~~~~----~~-~-----~~~~---~~-~~---~-----~~~~~~~~~~~~~~---l~~~~~ 132 (263)
T cd01305 81 ELLRRALGKLPVPF---EVILGR----PT-E-----PDDP---EI-LL---E-----VADGLGLSSANDVD---LEDILE 132 (263)
T ss_pred HHHHHHHHhcCCCc---eEEecc----CC-c-----chHH---HH-HH---h-----hcccccCCCCCccC---HHHHHH
Confidence 67788888999984 111111 10 0 0111 11 11 1 11124455555555 999999
Q ss_pred HHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc
Q 015784 231 MAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM 310 (400)
Q Consensus 231 ~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~ 310 (400)
.|+++|+++++|+.+...+. +...++.+.+. +.+ ++.|+.++++++++++++.|+.+++||.+|+++
T Consensus 133 ~A~~~g~~v~~H~~e~~~~~---------g~~~i~~~~~~---~~~-~i~H~~~l~~~~~~~la~~g~~v~~~P~sn~~l 199 (263)
T cd01305 133 LLRRRGKLFAIHASETRESV---------GMTDIERALDL---EPD-LLVHGTHLTDEDLELVRENGVPVVLCPRSNLYF 199 (263)
T ss_pred HHHHCCCeeEEecCCCCCCC---------CchhHHHHHhC---CCC-EEEEcCCCCHHHHHHHHHcCCcEEEChhhHHHh
Confidence 99999999999999886532 12245555554 233 479999999999999999999999999999987
Q ss_pred -cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHH
Q 015784 311 -LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKS 384 (400)
Q Consensus 311 -~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~ 384 (400)
.+..|+++|+++|+++++|||+... ++.+++++|+.+....+.. ..++++++|+++|.|+|++
T Consensus 200 ~~g~~p~~~l~~~Gv~v~lGtD~~~~-~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~aT~~gA~~ 263 (263)
T cd01305 200 GVGIPPVAELLKLGIKVLLGTDNVMV-NEPDMWAEMEFLAKYSRLQ----------GYLSPLEILRMATVNAAEF 263 (263)
T ss_pred CCCCCCHHHHHHCCCcEEEECCCCcc-CCCCHHHHHHHHHHHhccc----------ccCCHHHHHHHHhhccccC
Confidence 7889999999999999999998655 4678999999987665421 1479999999999999974
No 45
>TIGR01975 isoAsp_dipep isoaspartyl dipeptidase IadA. The L-isoaspartyl derivative of Asp arises non-enzymatically over time as a form of protein damage. In this isomerization, the connectivity of the polypeptide changes to pass through the beta-carboxyl of the side chain. Much but not all of this damage can be repaired by protein-L-isoaspartate (D-aspartate) O-methyltransferase. This model describes the isoaspartyl dipeptidase IadA, apparently one of two such enzymes in E. coli, an enzyme that degrades isoaspartyl dipeptides and may unblock degradation of proteins that cannot be repaired. This model also describes closely related proteins from other species (e.g. Clostridium perfringens, Thermoanaerobacter tengcongensis) that we assume to be equivalent in function. This family shows homology to dihydroorotases.
Probab=99.97 E-value=8.5e-30 Score=232.88 Aligned_cols=310 Identities=20% Similarity=0.246 Sum_probs=198.1
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|++++. +.+.+|+|+||+|++|++..+.+..++ ...+++|++|++|+|||||.|+|+.... ..+
T Consensus 2 ~li~n~~v~~~~~----~~~~dvlI~~gkI~~Ig~~~~~~~~~~-~~~~i~d~~G~~v~PGlID~HvH~~~gg----~~~ 72 (389)
T TIGR01975 2 TLLKGAEVYAPEY----IGKKDILIANDKIIAIADEIPSTKDFV-PNCVVVGLEGMIAVPGFIDQHVHIIGGG----GEG 72 (389)
T ss_pred EEEECcEEEcCCc----CcceeEEEECCEEEEEcCCccccccCC-CCeEEECCCCCEEccCEeehhhcccccc----ccC
Confidence 5899999998642 356799999999999998765432122 1234566699999999999999997521 111
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc-----CC---HHHHHHHHHHcCCeEEEeccccc
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QH---VSEMAKAVELLGLRACLVQSTMD 172 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~-----~~---~~~~~~~~~~~g~~~~~~~~~~~ 172 (400)
.. ...+++ ..+.+++++|+||+.++.+ .+ .....++....|++.+.....+.
T Consensus 73 ~~-------------~~~~~e-------~~~~e~l~~GvTTv~d~~g~~~~~~~~~~~~a~~~al~~~Gir~~~~~g~~~ 132 (389)
T TIGR01975 73 GP-------------TTRTPE-------LTLSDITKGGVTTVVGLLGTDGITRHMESLLAKARALEEEGISCYMLTGAYH 132 (389)
T ss_pred CC-------------ccCCHH-------HHHHHHHhCCcEEEecCcccCccccChhhHHHHHHHHHHhCCEEEEEccccc
Confidence 00 011222 1356799999999999753 22 33678889999999988766554
Q ss_pred CCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCe-EEEeeccccccCCHHHHHHHHHHHHHcC----Ce--eeEecCC
Q 015784 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRI-RIWFGIRQIMNATDRLLLETRDMAREFK----TG--IHMHVAE 245 (400)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~e~l~~~~~~a~~~~----~~--v~~H~~~ 245 (400)
. +......+.. ....+++... .+ ++.+.-|.....+.+.|..+.+.++..| ++ +++|..+
T Consensus 133 ~----p~~t~t~~~~----~d~~~~d~ii-----G~~~ia~sd~r~~~~~~~~l~~~~~~~~~~g~~~~~~g~~~vH~g~ 199 (389)
T TIGR01975 133 V----PSRTITGSVE----SDLLLIDKVI-----GVGEIAISDHRSAQPTVEHLTNMAAEARVGGLLGGKPGIVNFHVGD 199 (389)
T ss_pred C----CCcccccchh----hheeeehhhc-----ccceEEEccCcCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 3 1111111111 1111122211 13 2556666677788889999999999998 89 9999998
Q ss_pred CchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC------hhHHHHHHhcCCeEEECccccccc--cCcc---
Q 015784 246 IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN------HTEIGLLSRAGVKVSHCPASAMRM--LGFA--- 314 (400)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~------~~~i~~~~~~~~~~~~~p~~~~~~--~~~~--- 314 (400)
.+...+.+.+ .++..+++- .+-|..+++ ++.++.+++.+..-+..|.+...+ ....
T Consensus 200 ~~~~l~~l~~----------~~~~~di~~---~~f~pth~~r~~~l~~~~i~~~~~gg~iDv~~~~~~~~l~~~~~~~~~ 266 (389)
T TIGR01975 200 SKRALQPIYE----------LVENTDVPI---TQFLPTHINRNVPLFEAGLEFAKKGGTIDLTSSIDPQFRKEGEVAPAE 266 (389)
T ss_pred chhhHHHHHH----------HHHhcCCCh---hheecCccCCCHHHHHHHHHHHHhCCcEEEeCCCCccchhccccChHH
Confidence 7765554333 333333221 112222332 345666766666544444432222 2223
Q ss_pred cHHHHHHcCCc---EEEcCCCCCCCCCC---------------CHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHH
Q 015784 315 PIKEMLHADIC---VSLGTDGAPSNNRM---------------SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 376 (400)
Q Consensus 315 ~~~~~~~~Gv~---v~~gtD~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~ 376 (400)
.+++++++|++ ++++||...+.+.+ +++.+++.+... .+++++|+|++
T Consensus 267 ~~~~~~~~Gv~~~~i~isSD~~gs~p~~~~~g~~~~~g~g~~~sl~~~~~~lv~~--------------g~ls~~eal~~ 332 (389)
T TIGR01975 267 GIKKALEAGVPLEKVTFSSDGNGSQPFFDENGELTGLGVGSFETLFEEVREAVKD--------------GDVPLEKALRV 332 (389)
T ss_pred HHHHHHHcCCCcceEEEEeCCCCCCCccccccccccCCcCcHHHHHHHHHHHHHh--------------CCCCHHHHHHH
Confidence 45889999997 49999975321212 235555544422 24899999999
Q ss_pred HhHHHHHHcCCCCCccccccCcCC
Q 015784 377 ATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 377 ~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+|.|||++||++ ++|+|++|+.|
T Consensus 333 ~T~npA~~Lgl~-~~G~I~~G~~A 355 (389)
T TIGR01975 333 ITSNVAGVLNLT-GKGEISPGNDA 355 (389)
T ss_pred HHHHHHHHhCCC-CCCeECCCCcC
Confidence 999999999998 57999999987
No 46
>PRK06846 putative deaminase; Validated
Probab=99.97 E-value=9.8e-29 Score=230.89 Aligned_cols=341 Identities=14% Similarity=0.102 Sum_probs=213.1
Q ss_pred cEEEEecEEEeecCC------CceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccc
Q 015784 20 TMILHNAVIVTMDKE------SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQL 93 (400)
Q Consensus 20 ~~li~n~~i~~~~~~------~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~ 93 (400)
.+.|+|+++..+... .+.....+|+|+||+|++|++.... +..+.++||++|++|+|||||+|+|+.+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~g~I~~i~~~~~~----~~~~~~~id~~g~~v~Pg~iD~H~H~~~~~ 80 (410)
T PRK06846 5 HYWLTNVRLETGFDYENGVIVQTETALCTLEIQDGKIVAIRPNKQV----PDATLPTYDANGLLMLPAFREMHIHLDKTY 80 (410)
T ss_pred ceEEEeeecCccccccCceecCCceeeEEEEEECCEEEEeecCCCC----CCCCCceEeCCCCEEecCEEeeeecccchh
Confidence 467888776543320 1123456999999999999985321 112358999999999999999999998755
Q ss_pred ccccc-CC---CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC-------HHHHHHHHHHcCC
Q 015784 94 AKGIA-DD---VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-------VSEMAKAVELLGL 162 (400)
Q Consensus 94 ~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~-------~~~~~~~~~~~g~ 162 (400)
.++.. .. ..+.+|+....++..... ......+...++.++..|+|+++++.... .+...+...+...
T Consensus 81 ~~~~~~~~~~~~g~~~~l~~~~~~~~~~~--~~~~~~a~~~l~~~~~~Gtt~~r~~v~~~~~~~~~~~~a~~e~l~e~~~ 158 (410)
T PRK06846 81 YGGPWKACRPAKTIQDRIELEQKELPELL--PTTQERAEKLIELLQSKGATHIRSHCNIDPVIGLKNLENLQAALERYKD 158 (410)
T ss_pred hccchhhcCCcccHHHHHhhhhhhHHHhH--HHHHHHHHHHHHHHHhCCccEEEEEEeeCcccccchHHHHHHHHHHhhC
Confidence 44321 11 234556543222111100 11112222455667788999987654211 1222233333222
Q ss_pred eEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEe
Q 015784 163 RACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMH 242 (400)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H 242 (400)
........+ +...... ....+.+++..+.+...++ .+.++.....+++.+.++++.|+++|+++++|
T Consensus 159 ~v~~~~~a~------~~~g~~~------~~~~~lL~~al~~Ga~~i~-gl~p~~~~~~~~~~l~~~~~lA~~~g~~v~~H 225 (410)
T PRK06846 159 GFTYEIVAF------PQHGLLR------SNSEPLMREAMKMGAHLVG-GVDPASVDGAIEKSLDTMFQIAVDFNKGVDIH 225 (410)
T ss_pred cceEEEEec------cCcccCC------ccHHHHHHHHHHcCCCEEe-CCCCccCCcCHHHHHHHHHHHHHHhCCCcEEE
Confidence 211111111 1111000 1112334444344333232 34455556777889999999999999999999
Q ss_pred cCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC---ChhHH----HHHHhcCCeEEECccccccccCccc
Q 015784 243 VAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV---NHTEI----GLLSRAGVKVSHCPASAMRMLGFAP 315 (400)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~---~~~~i----~~~~~~~~~~~~~p~~~~~~~~~~~ 315 (400)
+.+...+.....+ ..++++.+.++.+ +..+.|+.++ +++++ +++++.|+.+++++. ...+.+|
T Consensus 226 v~e~~~~~~~~~~------~~~~~~~~~gl~~-~v~~~H~~~l~~~~~~e~~~li~~la~~g~~v~~~~~---~~~g~~p 295 (410)
T PRK06846 226 LHDTGPLGVATIK------YLVETTEEAQWKG-KVTISHAFALGDLNEEEVEELAERLAAQGISITSTVP---IGRLHMP 295 (410)
T ss_pred ECCCCChhHHHHH------HHHHHHHHhCCCC-CEEEEecchhhcCCHHHHHHHHHHHHHcCCeEEEeCC---CCCCCCC
Confidence 9987654332222 2578888888776 8999999874 56664 468999998876533 1267899
Q ss_pred HHHHHHcCCcEEEcCCCC----CCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCc
Q 015784 316 IKEMLHADICVSLGTDGA----PSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDI 391 (400)
Q Consensus 316 ~~~~~~~Gv~v~~gtD~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~ 391 (400)
+++|+++|+++++|||++ .++...|++.+++.+....+.. .. -...++++++|.+ |..+++++.+
T Consensus 296 ~~~l~~~Gv~v~lGtD~~~~~~~p~~~~d~~~~~~~~~~~~~~~--------~~--~~~~~~l~~~T~~-a~~l~~~~~~ 364 (410)
T PRK06846 296 IPLLHDKGVKVSLGTDSVIDHWSPFGTGDMLEKANLLAELYRWS--------DE--RSLSRSLALATGG-VLPLNDEGER 364 (410)
T ss_pred HHHHHhCCCeEEEecCCCCCCCcCCCCCCHHHHHHHHHHHhcCC--------CH--HHHHHHHHHHcCC-ccccccCCCc
Confidence 999999999999999976 2334678999998776554311 11 2456899999988 4568887778
Q ss_pred cccccCcCC
Q 015784 392 GSLEAGKKV 400 (400)
Q Consensus 392 G~i~~G~~A 400 (400)
|+|++||.|
T Consensus 365 G~l~~G~~A 373 (410)
T PRK06846 365 VWPKVGDEA 373 (410)
T ss_pred cCCCCCCcc
Confidence 999999987
No 47
>PRK10657 isoaspartyl dipeptidase; Provisional
Probab=99.97 E-value=8.8e-29 Score=230.62 Aligned_cols=312 Identities=21% Similarity=0.258 Sum_probs=194.4
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
.++|+|++|++.+ ...+++|+|+||+|++|++..+.+. .....++||++|++|+|||||+|+|+.... ..
T Consensus 2 ~~~i~~~~v~~~~----~~~~~~i~i~~g~I~~v~~~~~~~~--~~~~~~~id~~g~~v~PG~id~H~H~~~~~----~~ 71 (388)
T PRK10657 2 FTLLKNAHVYAPE----DLGKKDILIAGGKIIAIADNINIPD--IVPDIEVIDASGKILVPGFIDQHVHIIGGG----GE 71 (388)
T ss_pred eEEEEccEEECCC----CCcceEEEEECCEEEEecCCccccc--cCCCCeEEECCCCEEcccceeeeeCcccCC----CC
Confidence 4789999999754 2356799999999999987543211 112468999999999999999999986311 00
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc-----CCH---HHHHHHHHHcCCeEEEecccc
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QHV---SEMAKAVELLGLRACLVQSTM 171 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~-----~~~---~~~~~~~~~~g~~~~~~~~~~ 171 (400)
. . | ...+++ ..+..++++|+||+.++.+ ... ....+.+...|++.+.....+
T Consensus 72 ~-~---~---------~~~t~~-------~~~~~~~~~GvTTvvd~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~~~~ 131 (388)
T PRK10657 72 G-G---F---------STRTPE-------VQLSDLTEAGITTVVGLLGTDGITRSMESLLAKARALEEEGISAYMYTGSY 131 (388)
T ss_pred c-c---c---------ccCCHH-------HHHHHHHhCCceEEECCCCCCCCCCCHHHHHHHHHHHHhhCCEEEEEecCC
Confidence 0 0 0 011111 2446689999999999862 222 334555668899988554433
Q ss_pred cCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCC------eeeEecCC
Q 015784 172 DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT------GIHMHVAE 245 (400)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~------~v~~H~~~ 245 (400)
.. +..+. ...........+++... + +....++.....+++.+.++.+.++..+. ++++|+.+
T Consensus 132 ~~----~~~~~----~~~~~~~~~~~~~~~g~--g--~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~~g~~~~i~vH~~~ 199 (388)
T PRK10657 132 HV----PVRTI----TGSIRKDIVLIDKVIGV--G--EIAISDHRSSQPTVEELARLAAEARVGGLLSGKAGIVHVHMGD 199 (388)
T ss_pred CC----Cchhh----hcchhhceehhhhhhCc--c--eeeeccCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 21 11000 01111111122222211 1 33445555566788888888888776554 89999886
Q ss_pred CchhhhHHhhhcCCCCChH-HHHhHhCCCCCCeeeEEecC---CChhHHHHHHhcCCeEEEC-ccccccc-c---CcccH
Q 015784 246 IPYENQVVMDTRKVDHGTV-TFLDKIEFLQNNLLSAHTVW---VNHTEIGLLSRAGVKVSHC-PASAMRM-L---GFAPI 316 (400)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~h~~~---~~~~~i~~~~~~~~~~~~~-p~~~~~~-~---~~~~~ 316 (400)
+....+ .+ +++...|+...+++..|+.+ ..++.++.+ +.|..+.+. +...++. . ...++
T Consensus 200 ~~~~l~-----------~v~~~l~~~Gv~~~~~~~~H~~~~~~~~~~~~~~~-~~G~~~~v~~~~~~~~~~~~~~~~~~l 267 (388)
T PRK10657 200 GKKGLQ-----------PLFELLENTDIPISQFLPTHVNRNEPLFEQALEFA-KKGGVIDLTTSDPDFLGEGEVAPAEAL 267 (388)
T ss_pred chHHHH-----------HHHHHHHhcCCCcceeeCcccCCCHHHHHHHHHHH-HcCCeEEEecCCCcccccCccCHHHHH
Confidence 543222 33 45567787766666677776 333444444 456554222 2222222 2 23567
Q ss_pred HHHHHcCC---cEEEcCCCCCCCCCC---------------CHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHh
Q 015784 317 KEMLHADI---CVSLGTDGAPSNNRM---------------SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMAT 378 (400)
Q Consensus 317 ~~~~~~Gv---~v~~gtD~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T 378 (400)
.+++++|+ +++++||+...++.+ .++..++.+.. ..+++++++++++|
T Consensus 268 ~~~~~~G~~~d~v~l~tD~~~~~~~~~~~g~~~~~g~~~~~~l~~~~~~~~~--------------~~gis~~~~l~~aT 333 (388)
T PRK10657 268 KRALEAGVPLSRVTLSSDGNGSLPKFDEDGNLVGLGVGSVESLLEEVRELVK--------------DEGLPLEDALKPLT 333 (388)
T ss_pred HHHHHcCCChhheEEECCCCCCCceeccCCCEeccCcCchhhHHHHHHHHHH--------------hcCCCHHHHHHHHH
Confidence 89999998 789999974322111 14444443321 23599999999999
Q ss_pred HHHHHHcCCCCCccccccCcCC
Q 015784 379 INGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 379 ~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.|||+++|+++ +|+|++|+.|
T Consensus 334 ~npA~~lg~~~-~G~l~~G~~A 354 (388)
T PRK10657 334 SNVARFLKLNG-KGEILPGKDA 354 (388)
T ss_pred HHHHHHhCCCC-CCccCCCCcc
Confidence 99999999987 7999999987
No 48
>PRK15446 phosphonate metabolism protein PhnM; Provisional
Probab=99.96 E-value=7.2e-28 Score=221.60 Aligned_cols=303 Identities=20% Similarity=0.211 Sum_probs=178.3
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
++++|+|++|++.++ .. +++|+|+||+|++|++... ...++||++|++|||||||+|+|...
T Consensus 2 ~~~~i~~~~v~~~~~---~~-~~~i~i~~g~I~~i~~~~~-------~~~~~iDa~g~~v~PG~ID~H~h~~~------- 63 (383)
T PRK15446 2 MEMILSNARLVLPDE---VV-DGSLLIEDGRIAAIDPGAS-------ALPGAIDAEGDYLLPGLVDLHTDNLE------- 63 (383)
T ss_pred ccEEEECcEEEcCCC---ce-eeeEEEECCEEEEecCCCC-------CCCceEeCCCCEEEeCeEEcccCCcc-------
Confidence 578999999997542 33 6899999999999997432 13478999999999999999996542
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC-cC--C-----HH----HHHHHHHHcCCeEEE
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQ--H-----VS----EMAKAVELLGLRACL 166 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~-~~--~-----~~----~~~~~~~~~g~~~~~ 166 (400)
..+..|... .|+. .+++.. ...+++++|+||+.++. .. . .. .+.+.......+
T Consensus 64 --~~~~p~~~~-~~~~-----~~~~~~----~~~~a~~gG~Tt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 128 (383)
T PRK15446 64 --KHLAPRPGV-DWPA-----DAALAA----HDAQLAAAGITTVFDALSVGDEEDGGLRSRDLARKLIDAIEEARAR--- 128 (383)
T ss_pred --cccCCCCCC-ccch-----HHHHHH----HHHHHHhCCccEeeeeeEeccCCCCCcccHHHHHHHHHHHHHhhhc---
Confidence 111111110 0111 122222 22678999999999962 11 1 11 111111100000
Q ss_pred ecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeec--------------------------------
Q 015784 167 VQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGI-------------------------------- 214 (400)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 214 (400)
...+.+.+....... .....+.+..+ +...+...++.++..
T Consensus 129 ~~~~vD~~~h~~~~~---~~~~~~~~l~~----~~~~g~~~~k~fm~~~p~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~ 201 (383)
T PRK15446 129 GLLRADHRLHLRCEL---TNPDALELFEA----LLAHPRVDLVSLMDHTPGQRQFRDLEKYREYYAGKYGLSDEEFDAFV 201 (383)
T ss_pred CchhccceeEEEEEe---cCcchHHHHHH----HhcCCCcCEEEEeCCCCccccccCHHHHHHHHHhhcCCCHHHHHHHH
Confidence 111111111000000 00000111111 111111111111110
Q ss_pred ----cccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHH
Q 015784 215 ----RQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEI 290 (400)
Q Consensus 215 ----~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i 290 (400)
......+.+.++.+++.|+++|+++.+|+.+.... ++.....|+. +++| ..+.+.+
T Consensus 202 ~~~~~~~~~~~~e~i~~~v~~A~~~g~~v~sH~~~~~~~--------------i~~a~~~Gv~----~~e~--~~~~e~~ 261 (383)
T PRK15446 202 EERIALSARYAPPNRRAIAALARARGIPLASHDDDTPEH--------------VAEAHALGVA----IAEF--PTTLEAA 261 (383)
T ss_pred HHHHHhHhhcCHHHHHHHHHHHHHCCCceeecCCCCHHH--------------HHHHHHcCCc----eeeC--CCcHHHH
Confidence 00123567889999999999999999999765543 2223333432 1233 3457778
Q ss_pred HHHHhcCCeEEECccccccc---cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCC
Q 015784 291 GLLSRAGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAA 367 (400)
Q Consensus 291 ~~~~~~~~~~~~~p~~~~~~---~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (400)
+.+++.|+.++.++...++. .+..++++++++|+++++|||+.+. +++..+.... ...+
T Consensus 262 ~~~~~~g~~v~~~~p~~~r~~~~~~~~~~~~~~~~Gv~~~lgSD~~p~----~~~~~~~~~~--------------~~~g 323 (383)
T PRK15446 262 RAARALGMSVLMGAPNVVRGGSHSGNVSALDLAAAGLLDILSSDYYPA----SLLDAAFRLA--------------DDGG 323 (383)
T ss_pred HHHHHCCCEEEeCCcccccCCcccchHhHHHHHHCCCcEEEEcCCChh----hHHHHHHHHH--------------HhcC
Confidence 88888899888775533332 3456788999999999999998643 2443322211 1235
Q ss_pred CCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 368 LPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 368 l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++++++|+++|.|||+++|++++ |+|++|+.|
T Consensus 324 ls~~~al~~~T~npA~~lgl~~~-G~I~~G~~A 355 (383)
T PRK15446 324 LDLPQAVALVTANPARAAGLDDR-GEIAPGKRA 355 (383)
T ss_pred CCHHHHHHHHhHHHHHHcCCCCC-cCcCCCCcC
Confidence 99999999999999999999876 999999987
No 49
>PRK09357 pyrC dihydroorotase; Validated
Probab=99.96 E-value=8.1e-28 Score=226.31 Aligned_cols=317 Identities=19% Similarity=0.208 Sum_probs=192.6
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+++|+|++|++++ ..+.+++|+|+||+|++|++... ..+.++||++|++|+|||||+|+|+...
T Consensus 2 ~~~i~~~~v~~~~---~~~~~~~I~I~dg~I~~i~~~~~------~~~~~~iD~~g~~v~PG~ID~H~H~~~~------- 65 (423)
T PRK09357 2 MILIKNGRVIDPK---GLDEVADVLIDDGKIAAIGENIE------AEGAEVIDATGLVVAPGLVDLHVHLREP------- 65 (423)
T ss_pred cEEEEeEEEECCC---CCcceeeEEEECCEEEEeeCCCC------CCCCeEEECCCCEEeCCEEecccccCCC-------
Confidence 4899999999753 24577899999999999986421 1246899999999999999999998431
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC--------CHHHHHHHHHHcCCeEEEecccc
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLGLRACLVQSTM 171 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~ 171 (400)
.....++....+ +.++++|||++.++... ..+...+.++..+++.+.....+
T Consensus 66 ----------------~~~~~e~~~~~~----~~a~~~GvTt~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (423)
T PRK09357 66 ----------------GQEDKETIETGS----RAAAAGGFTTVVAMPNTKPVIDTPEVVEYVLDRAKEAGLVDVLPVGAI 125 (423)
T ss_pred ----------------CccccccHHHHH----HHHHhCCCeEEEecCCCCCCCCcHHHHHHHHHHhccCCcccEEEEEEE
Confidence 011223333332 45789999999998632 23344555555565544443333
Q ss_pred cCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhh
Q 015784 172 DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQ 251 (400)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~ 251 (400)
..+ .. ...+.+...+.+ . + +.. +.++..+..+++.+.++++.++++|+++++|+.+......
T Consensus 126 ~~~--~~--------~~~~~~~~~l~~----~--g-v~~-~~~~~~~~~~~~~l~~~~~~a~~~g~~v~iH~ee~~~~~~ 187 (423)
T PRK09357 126 TKG--LA--------GEELTEFGALKE----A--G-VVA-FSDDGIPVQDARLMRRALEYAKALDLLIAQHCEDPSLTEG 187 (423)
T ss_pred EeC--CC--------CccHHHHHHHHh----C--C-cEE-EECCCcccCCHHHHHHHHHHHHhcCCEEEEeCCCHHHhhc
Confidence 221 01 011222222221 1 2 222 3455556678889999999999999999999987644221
Q ss_pred HH------hhhcCC-CCCh------H-HHHhHhCCCCCCeeeEEecCCChhH-HHHHHhcCCe--EEECcccc-------
Q 015784 252 VV------MDTRKV-DHGT------V-TFLDKIEFLQNNLLSAHTVWVNHTE-IGLLSRAGVK--VSHCPASA------- 307 (400)
Q Consensus 252 ~~------~~~~~~-~~~~------~-~~l~~~~~~~~~~~~~h~~~~~~~~-i~~~~~~~~~--~~~~p~~~------- 307 (400)
.+ ...++. .+.. + +.+......+.+..+.|......-+ ++.+++.|+. +.+||.+.
T Consensus 188 ~~~~~g~~~~~~~~~~~p~~~E~~~i~~~~~la~~~g~~~hi~H~s~~~~~~~i~~a~~~g~~v~~e~~ph~L~~~~~~~ 267 (423)
T PRK09357 188 GVMNEGEVSARLGLPGIPAVAEEVMIARDVLLAEATGARVHICHVSTAGSVELIRWAKALGIKVTAEVTPHHLLLTDEDL 267 (423)
T ss_pred ccccCChhhHHhCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEEeCCCHHHHHHHHHHHHcCCCEEEEechHHheEcHHHH
Confidence 11 011111 0001 1 1112222334566677776644333 4555555644 55888431
Q ss_pred ------cc------c-cCcccHHHHHHcCCcEEEcCCCCCCCCCC---CHH--------HHHHHHHHHhcccccccCCCC
Q 015784 308 ------MR------M-LGFAPIKEMLHADICVSLGTDGAPSNNRM---SIV--------DEMYLASLINKGREVFANGTT 363 (400)
Q Consensus 308 ------~~------~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~---~~~--------~~~~~~~~~~~~~~~~~~~~~ 363 (400)
.+ . .+..++.+++++|+.+++|||+.+.+... +++ -+......+... .
T Consensus 268 ~~~~~~~k~~Pplr~~~~~~~l~~~l~~G~~~~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~~~~~~~~~--------~ 339 (423)
T PRK09357 268 LTYDPNYKVNPPLRTEEDREALIEGLKDGTIDAIATDHAPHAREEKECEFEAAPFGITGLETALSLLYTTL--------V 339 (423)
T ss_pred hCcCCceEECCCCCCHHHHHHHHHHHHcCCCeEEecCCCCCChHHccCCHhhCCCCceEHHHHHHHHHHHH--------H
Confidence 11 1 23457788899999999999998763221 111 112222222111 1
Q ss_pred CCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 364 DPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 364 ~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....++++++++++|.|||+++|+.+ |+|++|++|
T Consensus 340 ~~~~~~~~~~~~~~t~~~A~~~g~~~--G~i~~G~~A 374 (423)
T PRK09357 340 KTGLLDLEQLLEKMTINPARILGLPA--GPLAEGEPA 374 (423)
T ss_pred HcCCCCHHHHHHHHhHHHHHHhCCCC--CccCCCCcC
Confidence 23459999999999999999999975 999999987
No 50
>cd01297 D-aminoacylase D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics.
Probab=99.96 E-value=2.6e-27 Score=221.49 Aligned_cols=313 Identities=17% Similarity=0.159 Sum_probs=186.9
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+++|+|++|+++.+. ....++|.|+||+|++|++... ..+.++||++|++|+|||||+|+|+....
T Consensus 1 d~~i~n~~v~~~~~~--~~~~~~i~I~~g~I~~i~~~~~------~~~~~~iD~~G~~v~PG~iD~H~H~~~~~------ 66 (415)
T cd01297 1 DLVIRNGTVVDGTGA--PPFTADVGIRDGRIAAIGPILS------TSAREVIDAAGLVVAPGFIDVHTHYDGQV------ 66 (415)
T ss_pred CEEEECCEEECCCCC--ccccceEEEECCEEEEEecCCC------CCCCeEEECCCCEEccCEeeeeecCCccc------
Confidence 478999999986432 3356799999999999986432 12468999999999999999999996411
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC-------------------------------
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ------------------------------- 148 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~------------------------------- 148 (400)
+. +. ..+.++.+|+||+.++...
T Consensus 67 ------------------~~-~~-------~~~~a~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (415)
T cd01297 67 ------------------FW-DP-------DLRPSSRQGVTTVVLGNCGVSPAPANPDDLARLIMLMEGLVALGEGLPWG 120 (415)
T ss_pred ------------------cc-Cc-------chhhHHhCcEEEEEeccccCccCCCChhhhhhhhhhhhcccccccccCCC
Confidence 00 00 1134778899999985321
Q ss_pred --CHHHHHHHHHHcC--CeEEE--ecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeecccc--ccC
Q 015784 149 --HVSEMAKAVELLG--LRACL--VQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQI--MNA 220 (400)
Q Consensus 149 --~~~~~~~~~~~~g--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 220 (400)
......+.+...+ +.... ....+.... .... ........+.+..+++++....+ .+.+....... ...
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~l~~~~-~g~~-~~~~~~~~~~~~~~l~~~al~~G--a~g~~~~~~y~~~~~~ 196 (415)
T cd01297 121 WATFAEYLDALEARPPAVNVAALVGHAALRRAV-MGLD-AREATEEELAKMRELLREALEAG--ALGISTGLAYAPRLYA 196 (415)
T ss_pred CCCHHHHHHHHHhcCCCcCeeeccCcHHHHHHH-hCcC-CCCCCHHHHHHHHHHHHHHHHCC--CeEEEcccccCCcccC
Confidence 1111222221211 11110 000000000 0000 01112334555555555544432 22222222222 256
Q ss_pred CHHHHHHHHHHHHHcCCeeeEecCCCch-hhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCCh----------hH
Q 015784 221 TDRLLLETRDMAREFKTGIHMHVAEIPY-ENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH----------TE 289 (400)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~v~~H~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~----------~~ 289 (400)
+++.+.++++.++++|.++.+|+.+... +... .-+.+......+.+..+.|+..... +.
T Consensus 197 ~~~~l~~~~~~a~~~g~~v~~H~e~~~~~e~~a----------v~~~~~~a~~~g~r~~i~H~ss~~~~~~~~~~~~l~~ 266 (415)
T cd01297 197 GTAELVALARVAARYGGVYQTHVRYEGDSILEA----------LDELLRLGRETGRPVHISHLKSAGAPNWGKIDRLLAL 266 (415)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEECcccccHHHH----------HHHHHHHHHHhCCCEEEEEEecCCCcccchHHHHHHH
Confidence 8889999999999999999999976532 2221 1123333344466888999998765 56
Q ss_pred HHHHHhcCCeE--EECccccccccCcccHHHHHHcCCcEEEcCCCCCCCC-CCCHHHHHHHHHHHhcccccccCCCCCCC
Q 015784 290 IGLLSRAGVKV--SHCPASAMRMLGFAPIKEMLHADICVSLGTDGAPSNN-RMSIVDEMYLASLINKGREVFANGTTDPA 366 (400)
Q Consensus 290 i~~~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~~Gv~v~~gtD~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (400)
++++++.|+.+ .+||.... ...+++++++. ..++++||+.+.+. ....+..+. ..+.... ....
T Consensus 267 i~~a~~~G~~v~~e~~p~~~~---~~~~~~~l~~~-~~~~i~SDh~~~~~~~~~~~~~~~--~~l~~~~-------~~~~ 333 (415)
T cd01297 267 IEAARAEGLQVTADVYPYGAG---SEDDVRRIMAH-PVVMGGSDGGALGKPHPRSYGDFT--RVLGHYV-------RERK 333 (415)
T ss_pred HHHHHHhCCcEEEEeCCCCCC---cHHHHHHHHcC-CCceeeeCCCcCCCCCcchhCCHH--HHHHHHh-------cccC
Confidence 67777766554 46774321 15677888887 99999999986420 011111111 1111000 0122
Q ss_pred CCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 367 ALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 367 ~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.++++++++++|.|||++||+.+ +|+|++|+.|
T Consensus 334 ~~~~~~~~~~~t~~pA~~~gl~~-~G~l~~G~~A 366 (415)
T cd01297 334 LLSLEEAVRKMTGLPARVFGLAD-RGRIAPGYRA 366 (415)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCC-CceeCCCCCC
Confidence 38999999999999999999974 5999999987
No 51
>TIGR01792 urease_alph urease, alpha subunit. This model describes the urease alpha subunit UreC (designated beta or B chain, UreB in Helicobacter species). Accessory proteins for incorporation of the nickel cofactor are usually found in addition to the urease alpha, beta, and gamma subunits. The trusted cutoff is set above the scores of many reported fragments and of a putative second urease alpha chain in Streptomyces coelicolor.
Probab=99.96 E-value=2.3e-27 Score=221.52 Aligned_cols=307 Identities=17% Similarity=0.164 Sum_probs=181.2
Q ss_pred CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhh--hhh---ccCCCcEEeCCCcEeeecccccCcCCcc
Q 015784 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL--QQF---SQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~--~~~---~~~~~~viD~~g~~v~PG~iD~H~H~~~ 91 (400)
+.++++|+|++|++.. . +.+++|+|+||+|++|++..+.. ..+ ...++++||++|++|+|||||+|+|+..
T Consensus 64 ~~MDlVIkNg~VID~~---g-i~kaDI~IkDGrIaaIG~~~~p~~~~~v~~~~~~~tEVIDa~GkIV~PGlIDtHvH~~~ 139 (567)
T TIGR01792 64 GVLDLVITNALILDWT---G-IYKADIGIKNGRIVGIGKAGNPDTMDGVDMIVGASTEAISGEGKIVTAGGIDTHVHYIS 139 (567)
T ss_pred ccCcEEEECeEEECCC---C-eEEEEEEEECCEEEEEcCCCcccccccccccCCCCCeEEECCCCEEEECeEEeecCCCC
Confidence 4568999999999732 2 46789999999999999753210 100 0124689999999999999999999833
Q ss_pred cccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC---------------CHHHHHHH
Q 015784 92 QLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---------------HVSEMAKA 156 (400)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~---------------~~~~~~~~ 156 (400)
.. ..+.++..|+|++.+.+.. ....+.+.
T Consensus 140 ------------------------P~------------~~~aAl~gGVTTmI~~Gtgp~~~t~pTt~t~~~~~~~~~l~a 183 (567)
T TIGR01792 140 ------------------------PQ------------QVQAALDNGITTLIGGGTGPADGTNATTCTPGPWYLHRMLQA 183 (567)
T ss_pred ------------------------cc------------HHHHHHhCceEEEecCCCccccCCCCcccccchhhHHHHHHH
Confidence 10 0255889999999995421 11223444
Q ss_pred HHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcC
Q 015784 157 VELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK 236 (400)
Q Consensus 157 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~ 236 (400)
+...+++..+. ..+ .........+.+ .. +. ..+.++..+..+++.+.++++.|+++|
T Consensus 184 a~~~~in~g~~----g~g-----------~~~~~~~L~e~i----~a--Ga--~gfK~h~~y~~s~e~L~~al~~A~e~g 240 (567)
T TIGR01792 184 ADGLPINFGFT----GKG-----------SGSGPAALIEQI----EA--GA--CGLKVHEDWGATPAAIDNALSVADEYD 240 (567)
T ss_pred hccCCccEEEE----eCC-----------ccchHHHHHHHH----Hc--CC--cEEEeCCCCCCCHHHHHHHHHHHHHcC
Confidence 44555543221 011 001112222221 11 22 235567777899999999999999999
Q ss_pred CeeeEecCCCchh---hhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeE-EECcc-------
Q 015784 237 TGIHMHVAEIPYE---NQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKV-SHCPA------- 305 (400)
Q Consensus 237 ~~v~~H~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~-~~~p~------- 305 (400)
+++++|+ ++..+ ++...+.++. ++++++...|.-+. + .++-++.....++.. +..|.
T Consensus 241 v~V~iH~-ET~~E~g~ve~t~~a~g~--rpIh~~H~~G~g~g--------h-apdi~~~~~~~~~~~~st~pt~p~~~~~ 308 (567)
T TIGR01792 241 VQVAVHT-DTLNESGFVEDTIAAFKG--RTIHTYHTEGAGGG--------H-APDIIVVVGYNNILPSSTNPTLPYTVNT 308 (567)
T ss_pred CEEEEeC-CCcccchHHHHHHHHHCC--CcchhHhhcCCCCC--------c-HHHHHHHcCCCCcccCCCCCCCCCccCc
Confidence 9999999 88877 6656655543 35665555543211 0 111122221122211 11111
Q ss_pred --------------------------ccccccCcccHHHHHHcCCcEEEcCCCCCCCCCCC-HHHHHHHHHHHhcccccc
Q 015784 306 --------------------------SAMRMLGFAPIKEMLHADICVSLGTDGAPSNNRMS-IVDEMYLASLINKGREVF 358 (400)
Q Consensus 306 --------------------------~~~~~~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 358 (400)
|-.|.+.++.-..|.+.|+...++||+.+.+.... ..+..+.+..+.+.+..+
T Consensus 309 ~~e~~~m~~~~h~l~~~~~~d~~~a~~r~r~~t~~ae~~l~d~G~~~~~~sDs~~mgr~~~~~~r~~q~a~k~~~~~g~~ 388 (567)
T TIGR01792 309 IDEHLDMLMVCHHLNPKIPEDVAFAESRIRKETIAAEDVLQDMGAISMISSDSQAMGRIGEVVTRCWQTADKMKKQRGPL 388 (567)
T ss_pred hhhhcCeEEEeccCCCCCcccchhhhhhccceeccccchhhhCCcEEEecCCchhhCcccceeechHHHHHHHHHhcCCC
Confidence 01112334445668999999999999964322111 112222222222211111
Q ss_pred -cCC-CCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 359 -ANG-TTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 359 -~~~-~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.+. ..+.+.++.+ |+++|.|||+++|+++++|+|++||.|
T Consensus 389 ~~~~~~~~~~rl~r~--L~~yT~n~A~a~g~~~~~GsLe~Gk~A 430 (567)
T TIGR01792 389 PGDSPGNDNNRVKRY--VAKYTINPAITHGISDYIGSIEVGKLA 430 (567)
T ss_pred cccccCChhhhHHHH--HHHHhHHHHHHcCcccCceeeCCCCcc
Confidence 111 0112333343 999999999999999999999999987
No 52
>PRK13309 ureC urease subunit alpha; Reviewed
Probab=99.96 E-value=2.9e-27 Score=221.14 Aligned_cols=322 Identities=18% Similarity=0.172 Sum_probs=184.2
Q ss_pred CCCCCCCCCC-CC-cccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhh--h-----hhccCCCcEEeCCCc
Q 015784 6 SGGGSSSGSL-GS-SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL--Q-----QFSQMADQIIDLQSQ 76 (400)
Q Consensus 6 ~~~~~~~~~~-~~-~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~--~-----~~~~~~~~viD~~g~ 76 (400)
.|++.++... .. ..+++|+|++|+++.. . +.+++|.|+||+|++|++..... . .....++++||++|+
T Consensus 53 ~~~~~~~~~~~~~~~~DlVI~Ng~ViD~~~--g-i~kaDI~IkdGrI~aIG~~~~p~~~~~v~~~~~~g~~tevIDa~G~ 129 (572)
T PRK13309 53 DGMGANNNLTRDNGVLDLVITNVTIVDARL--G-VIKADVGIRDGKIVGIGKSGNPSTMDGVTQGMVVGVSTDAISGEHL 129 (572)
T ss_pred cCCCCCCCCCCCcCcCCEEEECeEEEcCCC--C-EEEEEEEEECCEEEEecCCCccccccccccccccCCCceEEECCCC
Confidence 4445544222 22 5689999999997432 2 35789999999999999743210 0 001124689999999
Q ss_pred EeeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc---------
Q 015784 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------- 147 (400)
Q Consensus 77 ~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~--------- 147 (400)
+|+|||||+|+|+.. ..+ . +.++.+||||+..++.
T Consensus 130 iVtPG~ID~HvH~~~------------------------P~~------~------~aAl~gGVTTvi~~G~gp~~~~n~~ 173 (572)
T PRK13309 130 ILTAAGIDTHIHLIS------------------------PQQ------A------YHALSNGVTTFFGGGIGPTDGTNGT 173 (572)
T ss_pred EEEeCEEEeecccCC------------------------cch------H------HHHHcCceEEEEecCCCCccCCCCC
Confidence 999999999999743 110 0 3489999999996421
Q ss_pred ---C---CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCC
Q 015784 148 ---Q---HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNAT 221 (400)
Q Consensus 148 ---~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (400)
. .+..+.+.++...+...... .+ ......+..+.+ .. +.+. +..+..+..+
T Consensus 174 ~~t~g~~~i~~~l~~a~~~pvn~g~~g----kg-----------~~~~~~~l~el~----~a--Ga~g--fk~~~d~g~t 230 (572)
T PRK13309 174 TVTPGPWNIRQMLRSIEGLPVNVGILG----KG-----------NSYGRGPLLEQA----IA--GVAG--YKVHEDWGAT 230 (572)
T ss_pred CCCCCHHHHHHHHHHhccCCcCEEEEc----CC-----------CCCCHHHHHHHH----hc--CcEE--EEecCcCCcC
Confidence 1 12334444444333321110 01 001112222221 11 2222 2222333458
Q ss_pred HHHHHHHHHHHHHcCCeeeEecCCCc--hhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCe
Q 015784 222 DRLLLETRDMAREFKTGIHMHVAEIP--YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK 299 (400)
Q Consensus 222 ~e~l~~~~~~a~~~~~~v~~H~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~ 299 (400)
++.+.++++.|+++++++.+|+..-. ...+...+.++. ++++++...+..+. + .++-++.....++.
T Consensus 231 ~~~L~~aLe~A~~~gv~VaiH~d~lnE~g~vE~~~aa~~g--rpih~~H~~Gaggg--------h-apd~~~~~~~~~~~ 299 (572)
T PRK13309 231 AAALRHALRVADEVDIQVAVHTDSLNECGYVEDTIDAFEG--RTIHTFHTEGAGGG--------H-APDIIKVASQTNVL 299 (572)
T ss_pred HHHHHHHHHHHHhcCCEEEEeCCccccchhHHHHHHHhCC--CceeeeeccCcccC--------C-chhHHHhcCCCCcc
Confidence 88999999999999999999965332 223332222221 12222211111110 0 01111111111221
Q ss_pred -EEECcc---------------------------------ccccccCcccHHHHHHcCCcEEEcCCCCCCC-CCCCHHHH
Q 015784 300 -VSHCPA---------------------------------SAMRMLGFAPIKEMLHADICVSLGTDGAPSN-NRMSIVDE 344 (400)
Q Consensus 300 -~~~~p~---------------------------------~~~~~~~~~~~~~~~~~Gv~v~~gtD~~~~~-~~~~~~~~ 344 (400)
.+..|. +-++....++.+.|++.|+.+++|||++... .+.++++.
T Consensus 300 ~~st~pt~p~~~~~~~e~~~m~m~~h~l~~~~~~D~~~a~srig~e~~~a~~~l~daGa~~~~gSD~pv~gr~~~~p~~~ 379 (572)
T PRK13309 300 PSSTNPTLPYGVNSQAELFDMIMVCHNLNPNVPADVAFAESRVRPETIAAENVLHDMGVISMFSSDSQAMGRVGENWLRA 379 (572)
T ss_pred cCCCCCCCCCcccchHhhhchhhhhccCCCCCCCChhHHHHhhCchhhcchhHHHhCCCEEEEcCCCCcccCCcccHHHH
Confidence 111111 0011144578899999999999999998531 24678887
Q ss_pred HHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 345 MYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++.+......+..........+.+++.++|+++|.|||+++|+++++|+|++||.|
T Consensus 380 iq~Av~rk~~~g~l~~~~~~~~~~~v~~aL~~yT~n~A~a~g~e~~~GsLe~Gk~A 435 (572)
T PRK13309 380 IQTADAMKAARGKLPEDAAGNDNFRVLRYVAKITINPAITQGVSHVIGSVEVGKMA 435 (572)
T ss_pred HHHHHHHHhccCCCCccCCCcccccHHHHHHHHhHHHHHHcCcccCccccCCCCcC
Confidence 87777554222111111111345899999999999999999999999999999987
No 53
>PRK13207 ureC urease subunit alpha; Reviewed
Probab=99.96 E-value=2.4e-26 Score=214.42 Aligned_cols=314 Identities=19% Similarity=0.194 Sum_probs=185.0
Q ss_pred CCCCCCCCC-CCCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhh--h---hhccCCCcEEeCCCcEee
Q 015784 6 SGGGSSSGS-LGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL--Q---QFSQMADQIIDLQSQILL 79 (400)
Q Consensus 6 ~~~~~~~~~-~~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~--~---~~~~~~~~viD~~g~~v~ 79 (400)
.|++.++.. ..+.++++|+|++|++.. . +.+++|+|+||+|++|++..... . .....+.++||++|++|+
T Consensus 53 ~~~~~~~~~~~~~~mDlVI~Na~Vvd~~---g-i~~adI~I~dGrI~~IG~~~~p~~~~~v~~~~~~~~eVIDa~G~iV~ 128 (568)
T PRK13207 53 DGMGQSQRARADGAVDTVITNALILDHW---G-IVKADIGIKDGRIVAIGKAGNPDIQDGVDIIIGPGTEVIAGEGLIVT 128 (568)
T ss_pred cccCcCCCCCccccCCEEEECeEEECCC---C-eEEEEEEEECCEEEEEeCCCCccccccccccCCCCCeEEECCCCEEE
Confidence 455555544 334678999999999742 2 35689999999999999742110 0 001135689999999999
Q ss_pred ecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC----------
Q 015784 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---------- 149 (400)
Q Consensus 80 PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~---------- 149 (400)
|||||+|+|+.. .. . .+.++.+||||+.+++...
T Consensus 129 PG~ID~HvH~~~------------------------P~-----~-------~~aALagGVTTVi~mg~gP~~gt~~~t~t 172 (568)
T PRK13207 129 AGGIDTHIHFIC------------------------PQ-----Q-------IEEALASGVTTMIGGGTGPATGTNATTCT 172 (568)
T ss_pred eCeEECccCCcc------------------------cc-----H-------HHHHHcCCCCEEEcCCcCCccCCcccccc
Confidence 999999999843 10 0 1458899999999973211
Q ss_pred -----HHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHH
Q 015784 150 -----VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRL 224 (400)
Q Consensus 150 -----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 224 (400)
...+.+.+....+..... ..+ .........+ ....+...+++. ..+..+++.
T Consensus 173 pG~~~l~~~l~~a~~~pin~g~~----g~g-----------~~~~~~~L~e----~i~aGA~gfKi~----~d~g~t~~~ 229 (568)
T PRK13207 173 PGPWHIHRMLQAADAFPMNIGFL----GKG-----------NASLPEALEE----QIEAGAIGLKLH----EDWGATPAA 229 (568)
T ss_pred cchHHHHHHHHHhhcCCceEEEE----cCC-----------CcccHHHHHH----HHHcCCCEEeec----CCCCCCHHH
Confidence 112222222211111100 000 1111222222 222222233432 223457889
Q ss_pred HHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecC-------CChhHHHHHHhcC
Q 015784 225 LLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVW-------VNHTEIGLLSRAG 297 (400)
Q Consensus 225 l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~-------~~~~~i~~~~~~~ 297 (400)
+..+++.|+++|+++.+|+...... +.++.-... ..+ ...|..| ..++-++.+...|
T Consensus 230 l~~aL~~A~~~gv~V~iHa~tlne~------------G~~e~t~~a-~~g---~~iH~~H~egaggghapdii~~~~~~~ 293 (568)
T PRK13207 230 IDNCLSVADEYDVQVAIHTDTLNES------------GFVEDTIAA-FKG---RTIHTFHTEGAGGGHAPDIIKVAGEPN 293 (568)
T ss_pred HHHHHHHHHHhCCEEEEeCCCcccc------------hHHHHHHHh-cCC---CEEEEEeecCCCcCCchHHHHHhhcCC
Confidence 9999999999999999999643321 012211111 111 1234444 2466677777777
Q ss_pred CeEE-ECccc----cc-----------------------------cccCcccHHHHHHcCCcEEEcCCCCCCC-CCCCHH
Q 015784 298 VKVS-HCPAS----AM-----------------------------RMLGFAPIKEMLHADICVSLGTDGAPSN-NRMSIV 342 (400)
Q Consensus 298 ~~~~-~~p~~----~~-----------------------------~~~~~~~~~~~~~~Gv~v~~gtD~~~~~-~~~~~~ 342 (400)
+..+ ..|.- |. |.+.++.-..+++.|+.++++||++... -+.+++
T Consensus 294 v~p~st~pt~p~~~~~~~e~~~m~m~~h~l~~~~~~d~~~a~srir~~t~~ae~~l~d~Ga~~~~~SD~p~~~~~~~~~~ 373 (568)
T PRK13207 294 VLPSSTNPTRPYTVNTIDEHLDMLMVCHHLDPSIPEDVAFAESRIRRETIAAEDILHDLGAISMISSDSQAMGRVGEVII 373 (568)
T ss_pred CccCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhhhhhhhccceeecccchhhhCCCEEEecCCcccccccccchh
Confidence 6633 33321 00 1122233355899999999999998652 235677
Q ss_pred HHHHHHHHHhcccccc--cCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 343 DEMYLASLINKGREVF--ANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 343 ~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+.++.+.......... ..+..+.+.+++. |+++|.|||+++|+++++|+|++||.|
T Consensus 374 r~~q~A~~r~~~~G~~~~d~~~~~n~ri~~~--l~~~T~npA~alG~~~~vGsIe~Gk~A 431 (568)
T PRK13207 374 RTWQTAHKMKVQRGPLPGDSGRNDNFRVKRY--IAKYTINPAIAHGISHEVGSVEVGKLA 431 (568)
T ss_pred HHHHHHHHHHHccCCCCcccccCccchHHHH--HHHHhHHHHHHcCCCcCccccCCCCcC
Confidence 7777777665322111 0111122233333 999999999999999989999999987
No 54
>PRK13206 ureC urease subunit alpha; Reviewed
Probab=99.95 E-value=5e-26 Score=211.69 Aligned_cols=318 Identities=18% Similarity=0.182 Sum_probs=179.4
Q ss_pred CCCCCCCCCC-CCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChh--hhh-----hhccCCCcEEeCCCcE
Q 015784 6 SGGGSSSGSL-GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSAD--ILQ-----QFSQMADQIIDLQSQI 77 (400)
Q Consensus 6 ~~~~~~~~~~-~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~--~~~-----~~~~~~~~viD~~g~~ 77 (400)
.|++.++... ....+++|+|++|++..+ +.+.+|.|+||+|++|++... ... .+....+++||++|++
T Consensus 57 ~g~~~~~~~~~~~~~DlVI~Na~IiD~~g----i~~adI~IkDGrIvaIG~~~~p~~~~gv~~~~~ig~~tevIDaeG~i 132 (573)
T PRK13206 57 ESMGQGRATRAEGAPDTVITGAVILDHWG----IVKADVGIRDGRIVAIGKAGNPDIMDGVHPDLVIGPSTEIIAGNGRI 132 (573)
T ss_pred cccCccCCCCCCCCCCEEEECeEEECCCC----eEEEEEEEECCEEEEEeCCCCccccccccccccCCCCCEEEECCCCE
Confidence 4445444332 245689999999997432 245799999999999997531 100 0111346899999999
Q ss_pred eeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC--------
Q 015784 78 LLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-------- 149 (400)
Q Consensus 78 v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~-------- 149 (400)
|+|||||+|+|+.. +. . .+.++.+||||+.+++...
T Consensus 133 V~PG~ID~HVH~~~------------------------Pg-----~-------~~aALagGVTTvi~~G~gP~~~t~~~t 176 (573)
T PRK13206 133 LTAGAIDCHVHFIC------------------------PQ-----I-------VDEALAAGITTLIGGGTGPAEGSKATT 176 (573)
T ss_pred EEeCEEeeeeccCC------------------------ch-----H-------HHHHHcCCeEEEEcCCCCccccCcccc
Confidence 99999999999843 10 0 1458999999999863211
Q ss_pred -------HHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCH
Q 015784 150 -------VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATD 222 (400)
Q Consensus 150 -------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (400)
...+.+.+....+...... .+ ....... +......+...++. +..+..++
T Consensus 177 ~t~g~~~l~~~~~aa~~~pvn~g~~g----~g-----------~~~~~~~----L~el~~aGA~GfKi----~~d~g~t~ 233 (573)
T PRK13206 177 VTPGAWHLARMLEALDGWPVNVALLG----KG-----------NTVSAEA----LWEQLRGGAGGFKL----HEDWGSTP 233 (573)
T ss_pred cccchhHHHHHHHHhhcCceeEEEec----Cc-----------CcCCHHH----HHHHHHCCCcEEee----cCccCCCH
Confidence 1122222222111111100 00 0000112 22222222223332 23345789
Q ss_pred HHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC----ChhHHHHHHhcCC
Q 015784 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV----NHTEIGLLSRAGV 298 (400)
Q Consensus 223 e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~----~~~~i~~~~~~~~ 298 (400)
+.+..+++.|+++|+++.+|+..-.+. . .+|. ......+....+.|.... .++-|+.....++
T Consensus 234 ~~i~~aL~~A~~~gv~V~iHadtlne~-g-----------~~E~-t~aa~~gr~iH~~H~egaggghapd~~~~~~~~n~ 300 (573)
T PRK13206 234 AAIDACLRVADAAGVQVALHSDTLNEA-G-----------FVED-TLAAIAGRSIHAYHTEGAGGGHAPDIITVASHPNV 300 (573)
T ss_pred HHHHHHHHHHHHhCCEEEEECCCcccc-c-----------hhhH-HHHHhcCCeEEEEeccCCCcCcccHHHHhcCCCCC
Confidence 999999999999999999999643321 1 2222 111122222223333221 1233333333343
Q ss_pred eE-EECccc----c-----------------------------ccccCcccHHHHHHcCCcEEEcCCCCCCCCCCC-HHH
Q 015784 299 KV-SHCPAS----A-----------------------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMS-IVD 343 (400)
Q Consensus 299 ~~-~~~p~~----~-----------------------------~~~~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~-~~~ 343 (400)
.. +..|.- | .|.+.++.-..|++.|+.++++||++..+...+ +.+
T Consensus 301 lp~stnpt~p~~~nt~~e~~~m~m~~h~l~~~~~~d~~fa~srir~~ti~ae~~l~d~G~~~~~~SDs~~~~~~~e~~~~ 380 (573)
T PRK13206 301 LPSSTNPTRPHTVNTLDEHLDMLMVCHHLNPAVPEDLAFAESRIRPSTIAAEDVLHDMGAISMIGSDSQAMGRIGEVVLR 380 (573)
T ss_pred cCCCCCCCCCCcccchhhhhCeEEeeccCCCCCcchhhhhhhhccceeeccCchHhhCCcEEeccCCccccccccchhhh
Confidence 32 222220 0 011233344668999999999999986322111 223
Q ss_pred HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 344 EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.+..+..+...+ ....+....+.++.+++|+++|.|||+++|+++.+|+|++||.|
T Consensus 381 ~~q~a~~~~~rr-~~l~g~~~~~~~~v~~al~~yT~nPA~alG~~~~~GsLe~Gk~A 436 (573)
T PRK13206 381 TWQTAHVMKRRR-GALPGDGRADNNRARRYVAKYTICPAVAHGIDHEIGSVEVGKLA 436 (573)
T ss_pred HHHHHHHHHhcc-CCCCCCCcccchhHHHHHHHHHHHHHHHhCCCcCCcccCCCCcC
Confidence 333332222211 11112223566999999999999999999999889999999987
No 55
>PRK13404 dihydropyrimidinase; Provisional
Probab=99.95 E-value=8.3e-27 Score=220.72 Aligned_cols=327 Identities=17% Similarity=0.204 Sum_probs=186.2
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
++++|+|++|+++++ . .+++|+|+||+|++|++.. + .+.++||++|++|+|||||+|+|+......
T Consensus 4 ~d~~i~~~~v~~~~~---~-~~~~i~I~dg~I~~i~~~~------~-~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~--- 69 (477)
T PRK13404 4 FDLVIRGGTVVTATD---T-FQADIGIRGGRIAALGEGL------G-PGAREIDATGRLVLPGGVDSHCHIDQPSGD--- 69 (477)
T ss_pred CcEEEECCEEEcCCC---c-eEEEEEEECCEEEEecCCC------C-CCCeEEECCCCEEecCEEEeEEcCCccccC---
Confidence 478999999997542 2 3579999999999998642 1 245899999999999999999999651100
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC----CHHHHHHHHHHc-CCeEEEecccccC
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELL-GLRACLVQSTMDC 173 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~----~~~~~~~~~~~~-g~~~~~~~~~~~~ 173 (400)
.....++... ....++.+|||++.++... ......+..... .-.... +.
T Consensus 70 -----------------~~~~~e~~~~----~s~aa~~gGvTtv~~~~~~~~~~~~~~~l~~~~~~~~~~~~v-----d~ 123 (477)
T PRK13404 70 -----------------GIMMADDFYT----GTVSAAFGGTTTVIPFAAQHRGQSLREAVEDYHRRAAGKAVI-----DY 123 (477)
T ss_pred -----------------CccccchHHH----HHHHHHcCCccEEEEccCCCCCCCHHHHHHHHHHHhccCcEE-----EE
Confidence 0011122222 3356789999999997632 122222222211 111111 11
Q ss_pred CCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhh--
Q 015784 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQ-- 251 (400)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~-- 251 (400)
+...... . ..... ..+.+..+...+...++++..... ...+++.+.++++.++++|.+|.+|+.+......
T Consensus 124 ~~~~~~~--~-~~~~~---~~~~v~~l~~~G~~~iKi~~~~~~-~~~~~~~l~~~~~~a~~~g~~V~~Hae~~~~i~~~~ 196 (477)
T PRK13404 124 AFHLIVA--D-PTEEV---LTEELPALIAQGYTSFKVFMTYDD-LKLDDRQILDVLAVARRHGAMVMVHAENHDMIAWLT 196 (477)
T ss_pred EEEEEec--C-CChhh---HHHHHHHHHHcCCCEEEEEecCCC-CCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH
Confidence 1000000 0 00111 111123333334445776543222 4567788999999999999999999965433110
Q ss_pred -HHhh-------hcCCCC------ChH-HHHhHhCCCCCCeeeEEecCCC-hhHHHHHHhcCC--eEEECcccccc----
Q 015784 252 -VVMD-------TRKVDH------GTV-TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAGV--KVSHCPASAMR---- 309 (400)
Q Consensus 252 -~~~~-------~~~~~~------~~~-~~l~~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~~--~~~~~p~~~~~---- 309 (400)
.... .+...+ ..+ +.+......+.+..+.|...-. -+.++.+++.|+ .+.+||...+-
T Consensus 197 ~~~~~~G~~~~~~~~~~rp~~~E~~~v~~~~~la~~~g~~~hi~Hvs~~~~~~~i~~~k~~g~~vt~e~~ph~L~l~~~~ 276 (477)
T PRK13404 197 KRLLAAGLTAPKYHAISRPMLAEREATHRAIALAELVDVPILIVHVSGREAAEQIRRARGRGLKIFAETCPQYLFLTAED 276 (477)
T ss_pred HHHHHCCCcchhhccccCCHHHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEChhhhccCHHH
Confidence 0010 000000 011 1222222334455566666421 245666666664 45677764220
Q ss_pred c-------------------cCcccHHHHHHcCCcEEEcCCCCCCCCC-----------CCHH--------HHHHHHHHH
Q 015784 310 M-------------------LGFAPIKEMLHADICVSLGTDGAPSNNR-----------MSIV--------DEMYLASLI 351 (400)
Q Consensus 310 ~-------------------~~~~~~~~~~~~Gv~v~~gtD~~~~~~~-----------~~~~--------~~~~~~~~~ 351 (400)
+ .....+.+++..|...+++|||.|.... .+++ -++.+...+
T Consensus 277 ~~~~~~~g~~~k~~Pplr~~~d~~aL~~~l~~G~id~i~sDHap~~~~eK~~~~~~~~~~~~~~~~~G~~gie~~l~~ll 356 (477)
T PRK13404 277 LDRPGMEGAKYICSPPPRDKANQEAIWNGLADGTFEVFSSDHAPFRFDDTDGKLAAGANPSFKAIANGIPGIETRLPLLF 356 (477)
T ss_pred hcCccccCCceEECCCCCChHHHHHHHHHHhCCCceEEecCCCCCCcccchhhhhccCCCCHhhCCCCcccHHHHHHHHH
Confidence 0 1122456677889999999999876310 1122 122333333
Q ss_pred hcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 352 NKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 352 ~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.+.. ....++++++++++|.|||++||+.+++|+|++|++|
T Consensus 357 ~~~v--------~~~~ls~~~~~~~~t~~pA~~lgl~~~~G~i~~G~~A 397 (477)
T PRK13404 357 SEGV--------VKGRISLNRFVALTSTNPAKLYGLYPRKGAIAIGADA 397 (477)
T ss_pred HHHH--------HcCCCCHHHHHHHHHHHHHHHhCCCCCCceecCCCcC
Confidence 2211 1335999999999999999999996567999999987
No 56
>TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM. This family consists of proteins from in the PhnM family. PhnM is a a protein associated with phosphonate utilization in a number of bacterial species. In Pseudomonas stutzeri WM88, a protein that is part of a system for the oxidation of phosphites (another form of reduced phosphorous compound) scores between trusted and noise cutoffs.
Probab=99.95 E-value=6.1e-26 Score=208.11 Aligned_cols=303 Identities=20% Similarity=0.258 Sum_probs=173.4
Q ss_pred EEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCCC
Q 015784 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDV 101 (400)
Q Consensus 22 li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~ 101 (400)
+|+|++|++.++ .++ ++|.|+||+|++|++... ...++||++|++|+|||||+|+|........ ..
T Consensus 1 ~i~~~~vv~~~~---~~~-~~i~i~dg~I~~i~~~~~-------~~~~~iD~~G~~v~PGlID~H~h~~e~~~~p---rp 66 (376)
T TIGR02318 1 VLSNARLVLEDE---VVE-GSVVIEDGAIADIGEGPV-------ALAEAIDGEGDLLLPGLIDLHTDNLERHMSP---RP 66 (376)
T ss_pred CEeCeEEECCCc---eEe-eeEEEECCEEEEecCCCC-------CCCceEeCCCCEEeccEEEcccCccccCcCC---CC
Confidence 589999997542 444 499999999999997432 2357899999999999999999986421110 00
Q ss_pred ChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc--------CCH---HHHH---HHHHHc-----CC
Q 015784 102 DLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------QHV---SEMA---KAVELL-----GL 162 (400)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~--------~~~---~~~~---~~~~~~-----g~ 162 (400)
+..|+ ..+.... ..++++++||||+.++.. ... +... +.++.. ..
T Consensus 67 -------~~~~~-----~~~~~~~----~~~~~aa~GiTT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 130 (376)
T TIGR02318 67 -------GVDWP-----IDAAIVE----HDKQLAAAGITTVFDALALGDTESGGRRPDNLRRMIDAISEARDRGLLRADH 130 (376)
T ss_pred -------CCCcc-----hHHHHHH----HHHHHhhCCcceEEeeEEecccCCcCccHHHHHHHHHHHHHhhhcCchhhhc
Confidence 00111 0111121 336688899999998731 111 1222 222211 11
Q ss_pred eEEEecc------------cccCCC-CC-------CcccccCCchHHHHHHHHHHHHhccCCCCCeE----EEee--ccc
Q 015784 163 RACLVQS------------TMDCGE-GL-------PASWAVRTTDDCIQSQKELYAKHHHAADGRIR----IWFG--IRQ 216 (400)
Q Consensus 163 ~~~~~~~------------~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~ 216 (400)
+.+.... +...+. +| +..+...... ...+.+.+ +. +.+. -... ...
T Consensus 131 ~~h~~~e~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~--g~~~~e~~~~~~~~~~~ 202 (376)
T TIGR02318 131 RLHLRCELPNEEVLPELEELIDDPRVDLISLMDHTPGQRQFRDLE----KYREYYRG--KR--GLSDDEFDEIVEERIAR 202 (376)
T ss_pred eeEEEEEecCccHHHHHHHHhcCCCcCEEEEeCCCCCcccccCHH----HHHHHHHh--hc--CCCHHHHHHHHHHHHHH
Confidence 1111111 000000 00 0000000000 11111100 00 0000 0000 000
Q ss_pred cccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhc
Q 015784 217 IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRA 296 (400)
Q Consensus 217 ~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~ 296 (400)
......+.++.+++.|++.|+++.+|..++...... ....|+. +++|. ++.+..+.+.+.
T Consensus 203 ~~~~~~e~i~~~v~~A~~~G~~v~sH~~~~~e~i~~--------------a~~~Gv~----~~E~~--~t~e~a~~~~~~ 262 (376)
T TIGR02318 203 RAEYGLANRSEIAALARARGIPLASHDDDTPEHVAE--------------AHDLGVT----ISEFP--TTLEAAKEARSL 262 (376)
T ss_pred HhhccHHHHHHHHHHHHHCCCeEEEecCCCHHHHHH--------------HHHCCCC----hhccC--CCHHHHHHHHHc
Confidence 002246789999999999999999999766653322 2233332 23343 578889999999
Q ss_pred CCeEEECccccccc---cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHH
Q 015784 297 GVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETV 373 (400)
Q Consensus 297 ~~~~~~~p~~~~~~---~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a 373 (400)
|+.+..+...-.+. .+..++..+++.|+.++++||+.+. +++..+.. ... ...+++++++
T Consensus 263 G~~v~~~~p~~~r~~~~~~~~~l~~~~~~G~~~~l~SD~~p~----~~l~~~~~---~~~----------~~~gl~~~~a 325 (376)
T TIGR02318 263 GMQILMGAPNIVRGGSHSGNLSARELAHEGLLDVLASDYVPA----SLLLAAFQ---LAD----------DVEGIPLPQA 325 (376)
T ss_pred CCeEEECCccccccccccchHHHHHHHHCCCcEEEEcCCCcH----HHHHHHHH---HHH----------hhcCCCHHHH
Confidence 99987774322222 2356788999999999999999653 23322221 110 1235899999
Q ss_pred HHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 374 LRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 374 l~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++++|.|||+++|+++ +|+|++|++|
T Consensus 326 l~~~T~npA~~lgl~~-~G~I~~G~~A 351 (376)
T TIGR02318 326 VKMVTKNPARAVGLSD-RGSIAPGKRA 351 (376)
T ss_pred HHHHhHHHHHHcCCCC-CCcCCCCCcc
Confidence 9999999999999975 6999999987
No 57
>PRK09237 dihydroorotase; Provisional
Probab=99.95 E-value=1.1e-25 Score=208.85 Aligned_cols=307 Identities=17% Similarity=0.165 Sum_probs=179.6
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|+++... .....+|+|+||+|++|++..+. + .+.++||++|++|+|||||+|+|+.....
T Consensus 1 ~~i~~~~v~d~~~~--~~~~~~v~i~~g~I~~v~~~~~~----~-~~~~~iD~~g~~v~PG~iD~H~H~~~~~~------ 67 (380)
T PRK09237 1 LLLRGGRVIDPANG--IDGVIDIAIEDGKIAAVAGDIDG----S-QAKKVIDLSGLYVSPGWIDLHVHVYPGST------ 67 (380)
T ss_pred CEEEeEEEECCCCC--cccceEEEEECCEEEEecCCCCC----C-CCCeEEECCCCEEecCEEEeeecCCCCCC------
Confidence 47999999975433 34667999999999999875432 1 24689999999999999999999864110
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc---CCHHHHHHHHHHc-CCeEEEecccccCCCC
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELL-GLRACLVQSTMDCGEG 176 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~---~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~ 176 (400)
.... ...+.++.+|+||+.+++. ...+...+..... +.+......+...++.
T Consensus 68 ---------------~~~~---------~~~~~~~~~G~Ttv~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~ 123 (380)
T PRK09237 68 ---------------PYGD---------EPDEVGVRSGVTTVVDAGSAGADNFDDFRKLTIEASKTRVLAFLNISRIGLL 123 (380)
T ss_pred ---------------ccCC---------CHHHHHHhCCcCEEEECCCCCCCCHHHHHHHHHhhhCcEEEEEEeeeccccc
Confidence 0000 0114488999999999753 3345555555544 5544322221112211
Q ss_pred CCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhh
Q 015784 177 LPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256 (400)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~ 256 (400)
.+ ...........+...+.+.++...- -.++..+..........+.++....++++.|+++.+|+.+.....+.+.
T Consensus 124 ~~-~~~~~~~~~~~~~~~~~~~~~~~~v-~glk~~~~~~v~~~~~~~~~~~~~~~a~~~g~~v~~H~~~~~~~~~~l~-- 199 (380)
T PRK09237 124 AQ-DELADLEDIDADAVAEAVKRNPDFI-VGIKARMSSSVVGDNGIEPLELAKAIAAEANLPLMVHIGNPPPSLEEIL-- 199 (380)
T ss_pred cc-chhcCHhHCCHHHHHHHHHhCcCcE-EEEEEEEecccccccCCchHHHHHHHHHhcCCCEEEEcCCCCCCHHHHH--
Confidence 11 1111111112334444444333211 1123222211111111123444445566899999999976554322221
Q ss_pred cCCCCChHHHHhHhCCCCCCeeeEEecCCCh-----------hHHHHHHhcCCeEEECccccccccCcccHHHHHHcCC-
Q 015784 257 RKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-----------TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADI- 324 (400)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~-----------~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~Gv- 324 (400)
... ....++.|+...+. +......++|+.+.+...+.. ......++++++|+
T Consensus 200 -----------~~l---~~g~~~~H~~~~~~~~~~~~~~~~~~~a~~~l~~G~~~~ig~g~~~--~~~~~~~~l~~~g~~ 263 (380)
T PRK09237 200 -----------ELL---RPGDILTHCFNGKPNRILDEDGELRPSVLEALERGVRLDVGHGTAS--FSFKVAEAAIAAGIL 263 (380)
T ss_pred -----------hhc---cCCCEEEecCCCCCCCccCCCCcchHHHHHHHHCCEEEEecCCCCc--ccHHHHHHHHHCCCC
Confidence 111 12235789887655 566777788888876532210 12234567788896
Q ss_pred cEEEcCCCCCCC----CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 325 CVSLGTDGAPSN----NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 325 ~v~~gtD~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+.+++||..+.+ +...+...+..+. ..+++++++++++|.|||++||++ ++|+|++|+.|
T Consensus 264 ~~~l~tD~~~~~~~~~~~~~l~~~~~~~~---------------~~g~~~~~al~~aT~n~A~~lgl~-~~G~l~~G~~A 327 (380)
T PRK09237 264 PDTISTDIYCRNRINGPVYSLATVMSKFL---------------ALGMPLEEVIAAVTKNAADALRLP-ELGRLQVGSDA 327 (380)
T ss_pred ceEEECCCCCCCcccchHhHHHHHHHHHH---------------HhCCCHHHHHHHHHHHHHHHcCCC-CCCcCCCCCcC
Confidence 569999975532 1122333333322 135999999999999999999995 57999999987
No 58
>cd01315 L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.
Probab=99.95 E-value=9.8e-26 Score=213.85 Aligned_cols=320 Identities=16% Similarity=0.144 Sum_probs=178.2
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+++|+|++|+++++ ..+++|+|+||||++|++.... ..+.++||++|++|+|||||+|+|+....
T Consensus 1 dl~i~~~~v~~~~~----~~~~~v~I~~g~I~~i~~~~~~-----~~~~~~iDa~G~~v~PG~ID~H~H~~~~~------ 65 (447)
T cd01315 1 DLVIKNGRVVTPDG----VREADIAVKGGKIAAIGPDIAN-----TEAEEVIDAGGLVVMPGLIDTHVHINEPG------ 65 (447)
T ss_pred CEEEECCEEECCCC----ceEeEEEEECCEEEEEeCCCCC-----CCCCeEEECCCCEEeccEeeceeccCCCC------
Confidence 57999999997532 3567999999999999975321 12568999999999999999999985310
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC-----CHHHHHHHHHHcC-CeEEEecccccC
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVSEMAKAVELLG-LRACLVQSTMDC 173 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-----~~~~~~~~~~~~g-~~~~~~~~~~~~ 173 (400)
....++... ..+.++++|||++.+++.. ......+...+.. ...........
T Consensus 66 -----------------~~~~e~~~~----~s~aal~gGvTtv~d~p~~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~- 123 (447)
T cd01315 66 -----------------RTEWEGFET----GTKAAAAGGITTIIDMPLNSIPPTTTVENLEAKLEAAQGKLHVDVGFWG- 123 (447)
T ss_pred -----------------ccccccHHH----HHHHHHhCCceEEEeCCCCCCCCcCCHHHHHHHHHHhccCceeeEEEEE-
Confidence 000112222 2356899999999998621 1112222211111 11111111000
Q ss_pred CCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccc---cccCCHHHHHHHHHHHHHcCCeeeEecCCCchhh
Q 015784 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ---IMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (400)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (400)
+ +.. ....+.. .+...+...+++++.... ....+.+.+.++++.+++.|+++.+|+.......
T Consensus 124 ~--~~~--------~~~~ei~----~l~~~G~~giKv~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~vH~e~~~~~~ 189 (447)
T cd01315 124 G--LVP--------GNLDQLR----PLDEAGVVGFKCFLCPSGVDEFPAVDDEQLEEAMKELAKTGSVLAVHAENPEITE 189 (447)
T ss_pred e--ecC--------CCHHHHH----HHHHcCCcEEEEEecccCCCCcccCCHHHHHHHHHHHHhcCCeEEEEcCCHHHHH
Confidence 0 000 0112222 222223334555443322 1235778899999999999999999996543211
Q ss_pred hHHhhhc----------CCC------CChH-HHHhHhCCCCCCeeeEEecCC-ChhHHHHHHhcCCe--EEECcccccc-
Q 015784 251 QVVMDTR----------KVD------HGTV-TFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVK--VSHCPASAMR- 309 (400)
Q Consensus 251 ~~~~~~~----------~~~------~~~~-~~l~~~~~~~~~~~~~h~~~~-~~~~i~~~~~~~~~--~~~~p~~~~~- 309 (400)
....... ... ...+ +.+......+.+..+.|.... .-+.++.++..|.. +.+||.....
T Consensus 190 ~~~~~~~~~g~~~~~~~~~~~p~~~e~~~~~~~~~la~~~g~~ihi~h~s~~~~~~~i~~~~~~g~~i~~e~~~h~l~~~ 269 (447)
T cd01315 190 ALQEQAKAKGKRDYRDYLASRPVFTEVEAIQRILLLAKETGCRLHIVHLSSAEAVPLIREARAEGVDVTVETCPHYLTFT 269 (447)
T ss_pred HHHHhHhhcCCCChHHhhccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCceEEEeccccEEEc
Confidence 1111000 000 0011 222222233445666665542 12334555555544 4456653210
Q ss_pred ------------------c-cCcccHHHHHHcCCcEEEcCCCCCCCC------CCCHHH----------HHHHHHHHhcc
Q 015784 310 ------------------M-LGFAPIKEMLHADICVSLGTDGAPSNN------RMSIVD----------EMYLASLINKG 354 (400)
Q Consensus 310 ------------------~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~------~~~~~~----------~~~~~~~~~~~ 354 (400)
. .....+.++++.|...+++||+.+... ..+++. .|-......
T Consensus 270 ~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~g~i~~i~SDh~p~~~~~k~~~~~~~~~~~~g~~g~~~~~~~~~~~~-- 347 (447)
T cd01315 270 AEDVPDGGTEFKCAPPIRDAANQEQLWEALENGDIDMVVSDHSPCTPELKLLGKGDFFKAWGGISGLQLGLPVMLTEA-- 347 (447)
T ss_pred HHHccCCCCceEECCCCCChHHHHHHHHHHhCCceeEEeCCCCCCCHHHhccCCCChhhCCCCeeEHHHhHHHHHHHH--
Confidence 0 111234456788999999999876421 011211 111111110
Q ss_pred cccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 355 REVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 355 ~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....+++++++++++|.|||+++|+++++|+|++|++|
T Consensus 348 --------~~~~~~~~~~~~~~~t~~pa~~~g~~~~~G~l~~g~~A 385 (447)
T cd01315 348 --------VNKRGLSLEDIARLMCENPAKLFGLSHQKGRIAVGYDA 385 (447)
T ss_pred --------HHcCCCCHHHHHHHHhHHHHHHhCCCCCCccccCCCCC
Confidence 01345999999999999999999998768999999987
No 59
>PLN02303 urease
Probab=99.95 E-value=5.9e-26 Score=216.92 Aligned_cols=318 Identities=18% Similarity=0.203 Sum_probs=185.0
Q ss_pred CCCCCCCCCCCC-CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhh--hhh-----hccCCCcEEeCCCc
Q 015784 5 SSGGGSSSGSLG-SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADI--LQQ-----FSQMADQIIDLQSQ 76 (400)
Q Consensus 5 ~~~~~~~~~~~~-~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~--~~~-----~~~~~~~viD~~g~ 76 (400)
+.|++.++.... ...+++|+|++|++.. . +.+++|+|+||+|++|++.... +.. .-..++++||++|+
T Consensus 319 r~gm~~~~~~~~~~~~DlVItNa~IID~~---G-i~kaDI~IkDGrIvaIGkagnp~i~~gv~~~~~~g~~teVIDAeGl 394 (837)
T PLN02303 319 RDGMGQATGYGAADSLDTVITNAVIIDYT---G-IYKADIGIKDGLIVGIGKAGNPDVMDGVTSNMIVGVNTEVIAGEGM 394 (837)
T ss_pred ccCCCcCCCCCCcCcCCEEEeCeEEECCC---C-cEEeEEEEECCEEEEecCCCCcccccccccccccCCCCeEEECCCC
Confidence 345555444432 3468999999999733 2 3567999999999999974311 110 01124699999999
Q ss_pred EeeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc---------
Q 015784 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------- 147 (400)
Q Consensus 77 ~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~--------- 147 (400)
+|+|||||+|+|+.. ..+. ..++.+|+|++...+.
T Consensus 395 IVtPG~ID~HVHf~~------------------------Pg~~------------~eaLasGVTTai~GGtgp~pnT~pt 438 (837)
T PLN02303 395 IVTAGGIDCHVHFIC------------------------PQLA------------TEAIASGITTLVGGGTGPAHGTCAT 438 (837)
T ss_pred EEEeCEEEeecCCCC------------------------CcHH------------HHHHHHhHHHHHhcCCCCCCcccCc
Confidence 999999999999843 1110 2244445555554321
Q ss_pred ------CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCC
Q 015784 148 ------QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNAT 221 (400)
Q Consensus 148 ------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (400)
..+..+.+.++...+...+.. .+ ......+..+.. .. +... +.++..+..+
T Consensus 439 t~t~g~e~I~~~L~aa~~~pvn~Gf~g----kG-----------~~s~l~eL~eli----ea--Ga~G--fK~h~d~gvT 495 (837)
T PLN02303 439 TCTPAPSHMKLMLQSTDDLPLNFGFTG----KG-----------NTAKPEGLHEII----KA--GAMG--LKLHEDWGTT 495 (837)
T ss_pred CCCCCHHHHHHHHHhcccCCCcEEEEc----cC-----------cccCHHHHHHHH----Hc--CcEE--EEECCCCCCC
Confidence 112223333333333322110 00 001122222222 11 2222 3344455778
Q ss_pred HHHHHHHHHHHHHcCCeeeEecCCCchh---hhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCC
Q 015784 222 DRLLLETRDMAREFKTGIHMHVAEIPYE---NQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGV 298 (400)
Q Consensus 222 ~e~l~~~~~~a~~~~~~v~~H~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~ 298 (400)
++.+.++++.|+++|+++++|+ |+..+ ++...+.++. ++++++...|..+. |. ++-|+.....++
T Consensus 496 pelL~raLe~AkelGVpVaIHA-EdLnE~G~vE~t~~a~G~--RpIh~~h~~Ga~gg-----ha----pdi~~~~~~~nv 563 (837)
T PLN02303 496 PAAIDNCLDVAEEYDIQVTIHT-DTLNESGCVEHSIAAFKG--RTIHTYHSEGAGGG-----HA----PDIIKVCGVKNV 563 (837)
T ss_pred HHHHHHHHHHHHHcCCEEEEec-CcccccchHHHHHHHHCC--ChHHHHHhcCCCCC-----CC----cHHHHhcCCCCc
Confidence 9999999999999999999995 55545 6666777764 48899999888763 11 111111111111
Q ss_pred e---------------------EEECcccc-------------ccccCcccHHHHHHcCCcEEEcCCCCCCCCC----CC
Q 015784 299 K---------------------VSHCPASA-------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNR----MS 340 (400)
Q Consensus 299 ~---------------------~~~~p~~~-------------~~~~~~~~~~~~~~~Gv~v~~gtD~~~~~~~----~~ 340 (400)
. +.+|..-+ .|.+.++.-..|.+.|+...++||+...+.. .-
T Consensus 564 lpsstnpt~p~t~nt~~e~~dm~m~~h~l~~~~~edvafa~srir~~tiaaed~l~d~G~~s~~~SDs~amgr~ge~i~r 643 (837)
T PLN02303 564 LPSSTNPTRPYTKNTIDEHLDMLMVCHHLDKNIPEDVAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVITR 643 (837)
T ss_pred cCCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhhhhhhhccchhhccchhhhccCCEEEEeccchhhCcccceeee
Confidence 1 11111111 1123344446688999999999998743221 12
Q ss_pred HHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 341 IVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.|++...+ ...+..+.........++++++|+++|.|||+++|+++++|+|++||.|
T Consensus 644 ~~q~A~k~---~~~~g~l~~~~~~~dn~rv~~aL~~~TiN~A~AlG~~~~vGSLe~GK~A 700 (837)
T PLN02303 644 TWQTAHKM---KSQRGALEPRGADNDNFRIKRYIAKYTINPAIAHGMSHFVGSVEVGKLA 700 (837)
T ss_pred hHHHHHHH---HHhcCCCCCccccccccCHHHHHHHHhHHHHHHCCcccCceeeCCCccc
Confidence 33333333 1111111111112345789999999999999999999999999999987
No 60
>cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.95 E-value=2.2e-27 Score=217.31 Aligned_cols=306 Identities=15% Similarity=0.121 Sum_probs=176.0
Q ss_pred CCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHH
Q 015784 47 QDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYIS 126 (400)
Q Consensus 47 ~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (400)
||+|++|++..+.+ .+.++||++|++|+|||||+|+|++...........+..+ ...++.+.+...+.+.+
T Consensus 1 ~gkI~~i~~~~~~~-----~~~~vid~~g~~v~Pg~id~h~h~~~~~~~~~~~~~d~~e----~~~~~~p~~~~~d~~~~ 71 (359)
T cd01309 1 DGKIVAVGAEITTP-----ADAEVIDAKGKHVTPGLIDAHSHLGLDEEGGVRETSDANE----ETDPVTPHVRAIDGINP 71 (359)
T ss_pred CCEEEEEcCCCCCC-----CCCeEEeCCCCEEcCcEEecccccCccccCCCcCcCCccc----cCCCCCceeEeecccCC
Confidence 79999999865422 2568999999999999999999998866554443333211 11222344444555666
Q ss_pred HHHHHHHHHhcCcceeeccCc-CCHH------------HHHHHHHHcCCeEEEecccccCCCCCCcccc--cCCchHH-H
Q 015784 127 TLLCGIELIHSGVTCFAEAGG-QHVS------------EMAKAVELLGLRACLVQSTMDCGEGLPASWA--VRTTDDC-I 190 (400)
Q Consensus 127 ~~~~~~~~l~~GvTt~~~~~~-~~~~------------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~ 190 (400)
....+..++++|||++....+ ..+- ...+...+....... .+.+.+....... ....... .
T Consensus 72 ~~~~~~~a~~~GvT~~~v~p~~~~~~gg~~~~i~~~~~~~~~~~~~~~~~~~~---a~g~~~~~~~~~~~~~p~trmg~~ 148 (359)
T cd01309 72 DDEAFKRARAGGVTTVQVLPGSANLIGGQGVVIKTDGGTIEDMFIKAPAGLKM---ALGENPKRVYGGKGKEPATRMGVA 148 (359)
T ss_pred CCHhHHHHHhcCceEEEecCCCCCcccceEEEEECCCCCHHHhcccCCceeEE---ecCCCCcccccccCCCccchHHHH
Confidence 666677899999999986531 1100 000111111111110 1111100000000 0001110 1
Q ss_pred HHHHHHH---HHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHH
Q 015784 191 QSQKELY---AKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFL 267 (400)
Q Consensus 191 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l 267 (400)
....+.+ +.+......... ....... .+..++.+...++. .+++.+|+..... ... .++..
T Consensus 149 ~~lr~~~~~a~~y~~~~~~~~~---~~~~~~~-~d~~l~~l~~~~~~-~~~v~vHa~~~~~-i~~----------~l~~~ 212 (359)
T cd01309 149 ALLRDAFIKAQEYGRKYDLGKN---AKKDPPE-RDLKLEALLPVLKG-EIPVRIHAHRADD-ILT----------AIRIA 212 (359)
T ss_pred HHHHHHHHHHHHHHHHhhhhhh---cccCCCC-CCccHHHHHHHHcC-CeeEEEEeCCHHH-HHH----------HHHHH
Confidence 1111111 111110000000 0000001 11134555555443 3899999975433 111 33344
Q ss_pred hHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc------cCcccHHHHHHcC-CcEEEcCCCCCCCCCCC
Q 015784 268 DKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM------LGFAPIKEMLHAD-ICVSLGTDGAPSNNRMS 340 (400)
Q Consensus 268 ~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~------~~~~~~~~~~~~G-v~v~~gtD~~~~~~~~~ 340 (400)
.+++ .+.++.|+... ++.++++++.|+.++++|..+... .+..+++++.++| +++++|||++.. +...
T Consensus 213 ~e~g---~~~~i~H~~~~-~~~~~~la~~gv~v~~~P~~~~~~~~~~~~~~~~~~~~l~~aGGv~valgsD~~~~-~~~~ 287 (359)
T cd01309 213 KEFG---IKITIEHGAEG-YKLADELAKHGIPVIYGPTLTLPKKVEEVNDAIDTNAYLLKKGGVAFAISSDHPVL-NIRN 287 (359)
T ss_pred HHcC---CCEEEECchhH-HHHHHHHHHcCCCEEECccccccccHHHhhcchhhHHHHHHcCCceEEEECCCCCc-cchh
Confidence 4444 35789999986 888999999999999999875432 3556889999998 999999999743 1222
Q ss_pred HHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 341 IVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++.++..+. ..+++++++|+++|.|||++||+++++|+|++||.|
T Consensus 288 l~~~~~~a~---------------~~gl~~~~al~~~T~n~A~~lg~~~~~G~l~~G~~A 332 (359)
T cd01309 288 LNLEAAKAV---------------KYGLSYEEALKAITINPAKILGIEDRVGSLEPGKDA 332 (359)
T ss_pred HHHHHHHHH---------------HcCCCHHHHHHHHHHHHHHHhCCCCCcccCCCCCcc
Confidence 333333222 235899999999999999999999989999999987
No 61
>TIGR03178 allantoinase allantoinase. This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases.
Probab=99.95 E-value=2.8e-27 Score=223.36 Aligned_cols=319 Identities=17% Similarity=0.167 Sum_probs=178.3
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+++|+|++|+++++ ..+++|+|+||+|++|++... ..+.++||++|++|+|||||+|+|+....
T Consensus 1 dl~i~~~~v~~~~~----~~~~~v~i~dg~I~~i~~~~~------~~~~~~id~~g~~v~PG~ID~H~H~~~~~------ 64 (443)
T TIGR03178 1 DLIIRGGRVILPNG----EREADVGVKGGKIAAIGPDIL------GPAAKIIDAGGLVVFPGVVDTHVHINEPG------ 64 (443)
T ss_pred CEEEECcEEECCCC----ceEEEEEEECCEEEEeeCCCC------CCCCeEEECCCCEEeccEeccccccCCCC------
Confidence 47899999998642 246899999999999987521 12568999999999999999999985410
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC-cCC----HHHHHHHHHHcCC-eEEEecccccC
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQH----VSEMAKAVELLGL-RACLVQSTMDC 173 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~-~~~----~~~~~~~~~~~g~-~~~~~~~~~~~ 173 (400)
....++... ....++++|||++.++. ... .....+...+... +...-.... .
T Consensus 65 -----------------~~~~~~~~~----~~~~~~~gGvTtv~dmp~~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~-~ 122 (443)
T TIGR03178 65 -----------------RTEWEGFET----GTRAAAAGGITTYIDMPLNSIPATTTRASLEAKFEAAKGKLAVDVGFW-G 122 (443)
T ss_pred -----------------ccccchHHH----HHHHHHcCCeEEEEECCCCCCCCCCcHHHHHHHHHHhccCCceeEEEE-e
Confidence 000112111 33568999999999986 211 1111111111111 100000000 0
Q ss_pred CCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccc---cccCCHHHHHHHHHHHHHcCCeeeEecCCCchhh
Q 015784 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ---IMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (400)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (400)
+ .. .....+ +..+...+...+++++.+.. ....+++.+.++++.+++.|+++.+|+ |+....
T Consensus 123 ~--~~--------~~~~~~----i~~~~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-E~~~~~ 187 (443)
T TIGR03178 123 G--LV--------PYNLDD----LRELDEAGVVGFKAFLSPSGDDEFPHVDDWQLYKGMRELARLGQLLLVHA-ENPAIT 187 (443)
T ss_pred c--cC--------CCCHHH----HHHHHHCCCcEEEEEecccCCCCcccCCHHHHHHHHHHHHhcCCeEEEec-cChHHH
Confidence 0 00 111122 23333333334666554432 235678899999999999999999995 444332
Q ss_pred hHH----hh-------hcCCCC------ChH-HHHhHhCCCCCCeeeEEecCCC-hhHHHHHHhcCCeE--EECccccc-
Q 015784 251 QVV----MD-------TRKVDH------GTV-TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAGVKV--SHCPASAM- 308 (400)
Q Consensus 251 ~~~----~~-------~~~~~~------~~~-~~l~~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~~~~--~~~p~~~~- 308 (400)
... .. .+-..+ ..+ +.+......+.+..+.|..... -+.++.+++.|+.+ .+||....
T Consensus 188 ~~~~~~~~~~g~~~~~~~~~~~p~~ae~~~~~~~~~la~~~g~~vhi~Hiss~~~~~~i~~~~~~g~~it~e~~ph~l~l 267 (443)
T TIGR03178 188 SALGEEAPPQGGVGADAYLASRPVFAEVEAIRRTLALAKVTGCRVHVVHLSSAEAVELITEAKQEGLDVTVETCPHYLTL 267 (443)
T ss_pred HHHHHHHHhcCCCChhHhcCcCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCcEEEEECccceEe
Confidence 211 00 000000 011 1222222233455555655421 24456666666554 45776421
Q ss_pred -----c-----c---------cCcccHHHHHHcCCcEEEcCCCCCCCC----CCCHHHHH--------HHHHHHhccccc
Q 015784 309 -----R-----M---------LGFAPIKEMLHADICVSLGTDGAPSNN----RMSIVDEM--------YLASLINKGREV 357 (400)
Q Consensus 309 -----~-----~---------~~~~~~~~~~~~Gv~v~~gtD~~~~~~----~~~~~~~~--------~~~~~~~~~~~~ 357 (400)
. . .....+.+.++.|...+++|||.|... ..+++..+ .+...+...
T Consensus 268 ~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~i~SDh~p~~~~~K~~~~~~~~~~G~~g~e~~l~~~~~~~--- 344 (443)
T TIGR03178 268 TAEEVPDGGTLAKCAPPIRDLANQEGLWEALLNGLIDCVVSDHSPCTPDLKRAGDFFKAWGGIAGLQSTLDVMFDEA--- 344 (443)
T ss_pred cHHHhhCcCcceEEcCCCCChHHHHHHHHHHHcCCccEEeCCCCCCChHHcCcCChhhCCCCeeEHHHhHHHHHHHH---
Confidence 0 0 011133455778999999999976521 11222111 111111000
Q ss_pred ccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 358 FANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 358 ~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....+++++++++++|.|||+++|+. +.|+|++|+.|
T Consensus 345 -----~~~~~l~~~~~~~~~t~~pA~~~g~~-~~G~l~~G~~A 381 (443)
T TIGR03178 345 -----VQKRGLPLEDIARLMATNPAKRFGLA-QKGRIAPGKDA 381 (443)
T ss_pred -----HHhcCCCHHHHHHHHhHHHHHHcCCC-CCCccCCCCcC
Confidence 01345999999999999999999995 46999999987
No 62
>PLN02795 allantoinase
Probab=99.95 E-value=3.7e-26 Score=217.12 Aligned_cols=328 Identities=16% Similarity=0.162 Sum_probs=185.4
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
.+++|+|++|++.++ . ..++|+|+||+|++|++....+.. ..+.++||+.|++|+|||||+|+|+...
T Consensus 44 ~~~vi~~~~vv~~~~---~-~~~~v~i~dG~I~~I~~~~~~~~~--~~~~~~ida~G~~v~PG~ID~H~H~~~~------ 111 (505)
T PLN02795 44 PHFVLYSKRVVTPAG---V-IPGAVEVEGGRIVSVTKEEEAPKS--QKKPHVLDYGNAVVMPGLIDVHVHLNEP------ 111 (505)
T ss_pred cceEEECCEEEECCC---e-EEEEEEEECCEEEEecCccccccc--cCCCEEEECCCCEEecCEEecccCcCCC------
Confidence 689999999998532 2 358999999999999975431110 1245899999999999999999998431
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc-CC----HHHHHHHHHHcCCeEEEecccccC
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-QH----VSEMAKAVELLGLRACLVQSTMDC 173 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~-~~----~~~~~~~~~~~g~~~~~~~~~~~~ 173 (400)
.....++... ..+.++.+|||++.+|.. .. .....+...+... .....+.
T Consensus 112 -----------------~~~~~e~~~~----~~~aa~~gGvTtv~dmp~~~~P~~~~~~~~~~~~~~~~----~~~~vd~ 166 (505)
T PLN02795 112 -----------------GRTEWEGFPT----GTKAAAAGGITTLVDMPLNSFPSTTSVETLELKIEAAK----GKLYVDV 166 (505)
T ss_pred -----------------CccchhHHHH----HHHHHHcCCcEEEECCCCCCCCCCChHHHHHHHHHHhc----cCceeee
Confidence 0001122222 335688899999999862 11 1222222222111 1111121
Q ss_pred CCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccc---cCCHHHHHHHHHHHHHcCCeeeEecCCCchhh
Q 015784 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIM---NATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (400)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (400)
+.. ... ...... ..+.+..+...+...+++++.++... ..+++.+.++++.++++|+++++|+.+.....
T Consensus 167 ~~~--~~~-~~~~~~----~~~~l~~~~~~G~~g~k~f~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~iH~E~~~l~~ 239 (505)
T PLN02795 167 GFW--GGL-VPENAH----NASVLEELLDAGALGLKSFMCPSGINDFPMTTATHIKAALPVLAKYGRPLLVHAEVVSPVE 239 (505)
T ss_pred ece--ecc-cCcchh----HHHHHHHHHHCCCcEEEEEecccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecCChhHhh
Confidence 110 000 000011 12222222222222366666555433 56788999999999999999999997654211
Q ss_pred -hHHhh-------hcCCCC------ChH-HHHhHhCCC-------CCCeeeEEecCC-C-hhHHHHHHhcC--CeEEECc
Q 015784 251 -QVVMD-------TRKVDH------GTV-TFLDKIEFL-------QNNLLSAHTVWV-N-HTEIGLLSRAG--VKVSHCP 304 (400)
Q Consensus 251 -~~~~~-------~~~~~~------~~~-~~l~~~~~~-------~~~~~~~h~~~~-~-~~~i~~~~~~~--~~~~~~p 304 (400)
..... .+..++ ..+ ..+...... +.+..+.|.... . -+.++.+++.| +.+.+||
T Consensus 240 ~~~~~~~~~~~~~~~~~~rP~~aE~~ai~~~~~la~~~~~~~~~~g~~lhi~HiSt~~~~~e~i~~ak~~G~~Vt~Ev~p 319 (505)
T PLN02795 240 SDSRLDADPRSYSTYLKSRPPSWEQEAIRQLLEVAKDTRPGGVAEGAHVHIVHLSDAESSLELIKEAKAKGDSVTVETCP 319 (505)
T ss_pred hhhhhhcCCcChhHhcccCCHHHHHHHHHHHHHHHHHhhhcccCCCCCEEEEECCChHHHHHHHHHHHHCCCcEEEEeCh
Confidence 00000 000000 011 111122122 456666776653 1 23456666677 5567788
Q ss_pred cccc-----------c------c---cCcccHHHHHHcCCcEEEcCCCCCCCCCC------CHHH--------HHHHHHH
Q 015784 305 ASAM-----------R------M---LGFAPIKEMLHADICVSLGTDGAPSNNRM------SIVD--------EMYLASL 350 (400)
Q Consensus 305 ~~~~-----------~------~---~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~------~~~~--------~~~~~~~ 350 (400)
...+ . + .....+.+.+..|...+++|||.|.+... +++. +......
T Consensus 320 h~L~l~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~i~sDHap~~~~~K~~~~~~~~~a~~G~~gle~~l~~~ 399 (505)
T PLN02795 320 HYLAFSAEEIPDGDTRYKCAPPIRDAANRELLWKALLDGDIDMLSSDHSPSPPDLKLLEEGNFLRAWGGISSLQFVLPAT 399 (505)
T ss_pred hhhcccHHHccCCCCceEEcCCCCChHHHHHHHHHHhCCCceEEecCCCCCChHHhccCcCCHhhCCCCceeHHHHHHHH
Confidence 6321 0 0 11123455677899999999998762111 1110 0111111
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+.. ....+++++++++++|.|||+++|+. ++|.|++|++|
T Consensus 400 ~~~---------~~~~~l~l~~~v~~~s~~pA~~~gl~-~~G~l~~G~~A 439 (505)
T PLN02795 400 WTA---------GRAYGLTLEQLARWWSERPAKLAGLD-SKGAIAPGKDA 439 (505)
T ss_pred HHH---------HHHcCCCHHHHHHHHHHHHHHHhCCC-CCCccCCCCcc
Confidence 111 01345899999999999999999995 46999999987
No 63
>PRK13985 ureB urease subunit beta; Provisional
Probab=99.95 E-value=4.2e-25 Score=203.69 Aligned_cols=320 Identities=18% Similarity=0.173 Sum_probs=180.7
Q ss_pred CCCCCCCCCCCCCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhh-------hhccCCCcEEeCCCcE
Q 015784 5 SSGGGSSSGSLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-------QFSQMADQIIDLQSQI 77 (400)
Q Consensus 5 ~~~~~~~~~~~~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~-------~~~~~~~~viD~~g~~ 77 (400)
+.|++.++....+..+++|+|++|++.. . +.+++|.|+||+|++|++...... .....++++||++|++
T Consensus 51 r~g~~~~~~~~~~~~DlVI~Na~IiD~~---g-i~kaDI~IkdGrIaaIG~~gn~~~~~~v~~~~~ig~~tevIDa~G~i 126 (568)
T PRK13985 51 REGMSQSNNPSKEELDLIITNALIIDYT---G-IYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLI 126 (568)
T ss_pred ccCCCCCCCCCCCcCCEEEECeEEECCC---C-cEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEECCCCE
Confidence 3555665555556778999999999743 2 346799999999999997532110 0001357899999999
Q ss_pred eeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC---------
Q 015784 78 LLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------- 148 (400)
Q Consensus 78 v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~--------- 148 (400)
|+|||||+|+|+.. .. .+ ..++++||||+.+++..
T Consensus 127 V~PG~ID~HvH~~~------------------------P~-----~~-------~~AlagGVTTvI~~G~gP~~~T~p~~ 170 (568)
T PRK13985 127 VTAGGIDTHIHFIS------------------------PQ-----QI-------PTAFASGVTTMIGGGTGPADGTNATT 170 (568)
T ss_pred EEeCEEEeeCCCCC------------------------cc-----HH-------HHHhcCceEEEEccCcCCCCCCCCcC
Confidence 99999999999843 10 01 23889999999985211
Q ss_pred ---C---HHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCH
Q 015784 149 ---H---VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATD 222 (400)
Q Consensus 149 ---~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (400)
. +..+.+.++...+..... ..+ ......+..+.+ .. +.+. +..+..+..++
T Consensus 171 ~tpg~~~i~~ml~~a~~~pvn~gf~----gkG-----------~~~~l~eL~el~----~a--GA~G--fK~~ed~g~t~ 227 (568)
T PRK13985 171 ITPGRRNLKWMLRAAEEYSMNLGFL----GKG-----------NSSNDASLADQI----EA--GAIG--FKIHEDWGTTP 227 (568)
T ss_pred CCCcHHHHHHHHHHhhccCccEEEe----cCC-----------ccCCHHHHHHHH----Hc--CCEE--EEECCccCCCH
Confidence 1 233444444333222111 001 001122222222 22 2332 22334455788
Q ss_pred HHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC----hhHHHHHHhcCC
Q 015784 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN----HTEIGLLSRAGV 298 (400)
Q Consensus 223 e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~----~~~i~~~~~~~~ 298 (400)
..+..+++.|+++++++.+|+..-... . .+|. ......+....+.|..... ++-++.....++
T Consensus 228 ~~I~~aL~vA~~~dv~V~iHtdtlne~-g-----------~~E~-t~aa~~gr~iH~~H~egaggghapdi~~~~~~~nv 294 (568)
T PRK13985 228 SAINHALDVADKYDVQVAIHTDTLNEA-G-----------CVED-TMAAIAGRTMHTFHTEGAGGGHAPDIIKVAGEHNI 294 (568)
T ss_pred HHHHHHHHHHHHcCCEEEEeCCCCCCc-h-----------hhHH-HHHHhcCCeEEEEeccCCCccchhhHHHHcCCCCc
Confidence 899999999999999999999754321 1 2221 1111122222223322211 222333323333
Q ss_pred e-EEECccc----c-----------------------------ccccCcccHHHHHHcCCcEEEcCCCCCCCCCCC-HHH
Q 015784 299 K-VSHCPAS----A-----------------------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMS-IVD 343 (400)
Q Consensus 299 ~-~~~~p~~----~-----------------------------~~~~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~-~~~ 343 (400)
. .+..|.- | .|.+.++.-.-|.+.|+...++||+...+.... ..+
T Consensus 295 lp~stnpt~p~t~nt~~e~~dm~m~~h~l~~~~~ed~afa~srir~~tiaaed~l~d~G~~s~~~SDs~~mgr~ge~~~r 374 (568)
T PRK13985 295 LPASTNPTIPFTVNTEAEHMDMLMVCHHLDKSIKEDVQFADSRIRPQTIAAEDTLHDMGIFSITSSDSQAMGRVGEVITR 374 (568)
T ss_pred ccCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhhhhhhhccccccccCchhhhCCcEEEEeccchhhCcccceeee
Confidence 3 2222220 0 011223334558899999999999874322112 112
Q ss_pred HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 344 EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
-.+.+..+.+.+..+.+.......+++++||+++|.|||+++|+++++|+|++||.|
T Consensus 375 ~~q~a~k~~~~~g~l~~~~~~~dnl~v~eAL~~yTin~A~A~G~e~~vGSLe~GK~A 431 (568)
T PRK13985 375 TWQTADKNKKEFGRLKEEKGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVA 431 (568)
T ss_pred hHHHHHHHHHhcCCCCCccccccccCHHHHHHHHhHHHHHHcCcccCceeECCCCcc
Confidence 222222222211111111112345899999999999999999999999999999987
No 64
>PRK07627 dihydroorotase; Provisional
Probab=99.95 E-value=3.1e-25 Score=206.79 Aligned_cols=317 Identities=15% Similarity=0.157 Sum_probs=178.1
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+++|+|++|+++.+. ...+++|+|+||+|++|++... +..+.++||++|++|+|||||+|+|+...
T Consensus 2 ~~~i~~~~v~~~~~~--~~~~~~I~I~~g~I~~i~~~~~-----~~~~~~~iDa~g~~vlPG~iD~H~H~~~~------- 67 (425)
T PRK07627 2 KIHIKGGRLIDPAAG--TDRQADLYVAAGKIAAIGQAPA-----GFNADKTIDASGLIVCPGLVDLSARLREP------- 67 (425)
T ss_pred eEEEEeeEEECCCCC--ccceeEEEEECCEEEEecCCCc-----CCCCCeEEECCCCEEeccEEeccccccCC-------
Confidence 689999999975432 3466899999999999987421 11356899999999999999999999541
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC--------HHHHHHHHHHc-CCeEEEeccc
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--------VSEMAKAVELL-GLRACLVQST 170 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~--------~~~~~~~~~~~-g~~~~~~~~~ 170 (400)
.....++... ....++.+||||+.++.... .+...+..... +... +....
T Consensus 68 ----------------g~~~~e~~~t----~s~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 126 (425)
T PRK07627 68 ----------------GYEYKATLES----EMAAAVAGGVTSLVCPPDTDPVLDEPGLVEMLKFRARNLNQAHV-YPLGA 126 (425)
T ss_pred ----------------CccccCcHHH----HHHHHHhCCeeEEEeCCCCCCCCCCHHHHHHHHHHhhccCceeE-EEeCe
Confidence 0001122222 23668999999999875322 11112111111 1222 11111
Q ss_pred ccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhh
Q 015784 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (400)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (400)
+..+ . ....+.+..++. .. .+..+.. ......+...+.++++.+++.|.++.+|+.+.....
T Consensus 127 ~~~g------~----~~~~~~~i~~l~----~~---G~~~fk~-~~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~~~~ 188 (425)
T PRK07627 127 LTVG------L----KGEVLTEMVELT----EA---GCVGFSQ-ANVPVVDTQVLLRALQYASTFGFTVWLRPLDAFLGR 188 (425)
T ss_pred EEcC------C----CccCHHHHHHHH----hC---CEEEEEc-CCcccCCHHHHHHHHHHHHhcCCEEEEecCChhhhh
Confidence 1111 0 111122222221 11 2222221 122245677899999999999999999997543211
Q ss_pred hHH------hhhcC-CCCC------hH-HHHhHhCCCCCCeeeEEecCCC-hhHHHHHHhcC--CeEEECcccccc----
Q 015784 251 QVV------MDTRK-VDHG------TV-TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAG--VKVSHCPASAMR---- 309 (400)
Q Consensus 251 ~~~------~~~~~-~~~~------~~-~~l~~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~--~~~~~~p~~~~~---- 309 (400)
... ....+ ..+- .+ +.+......+.+..+.|..... -+.++.+++.| +.+.+||.+...
T Consensus 189 ~~~~~~g~~~~~~~~~~~P~~aE~~av~r~~~la~~~~~~~hi~HvSs~~~~~~i~~ak~~g~~vt~Ev~ph~L~l~~~~ 268 (425)
T PRK07627 189 GGVAASGAVASRLGLSGVPVAAETIALHTIFELMRVTGARVHLARLSSAAGVALVRAAKAEGLPVTCDVGVNHVHLIDVD 268 (425)
T ss_pred CCCcCCCHhHHHcCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEEeCCCHHHHHHHHHHHHCCCCeEEEeccchheEeHhH
Confidence 000 00000 0000 11 1222222334566666665522 24456566666 445678874220
Q ss_pred -------------c---cCcccHHHHHHcCCcEEEcCCCCCCCC---CCCHHH--------HHHHHHHHhcccccccCCC
Q 015784 310 -------------M---LGFAPIKEMLHADICVSLGTDGAPSNN---RMSIVD--------EMYLASLINKGREVFANGT 362 (400)
Q Consensus 310 -------------~---~~~~~~~~~~~~Gv~v~~gtD~~~~~~---~~~~~~--------~~~~~~~~~~~~~~~~~~~ 362 (400)
+ .....+.+.+++|...+++|||.|... ..+++. +......+..
T Consensus 269 ~~~~~~~~k~~PPLR~~~d~~~L~~~l~~G~id~i~SDHaP~~~~~k~~~~~~~~~G~~g~e~~~pl~~~~--------- 339 (425)
T PRK07627 269 IGYFDSQFRLDPPLRSQRDREAIRAALADGTIDAICSDHTPVDDDEKLLPFAEATPGATGLELLLPLTLKW--------- 339 (425)
T ss_pred HhccCCceEEeCCCCCHHHHHHHHHHHhcCCCcEEEcCCCCCCHHHccCCHhhCCCCceeHHHHHHHHHHH---------
Confidence 0 112245667888999999999965421 001111 1111111110
Q ss_pred CCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 363 TDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 363 ~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....+++++++++++|.|||+++|+ + .|+|++|+.|
T Consensus 340 ~~~~~i~~~~~l~~~t~~pA~~lg~-~-~G~l~~G~~A 375 (425)
T PRK07627 340 ADEAKVPLARALARITSAPARVLGL-P-AGRLAEGAPA 375 (425)
T ss_pred HHhCCCCHHHHHHHHHHHHHHHhCC-C-CCcccCCCcC
Confidence 1134699999999999999999999 3 5999999987
No 65
>PRK09236 dihydroorotase; Reviewed
Probab=99.94 E-value=5.1e-25 Score=207.69 Aligned_cols=105 Identities=19% Similarity=0.286 Sum_probs=71.4
Q ss_pred EEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCC------------CCCCHHHHHH
Q 015784 280 AHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSN------------NRMSIVDEMY 346 (400)
Q Consensus 280 ~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~------------~~~~~~~~~~ 346 (400)
.|+.+++++++.. .+..+.++|. ++. .+..++.+++++|+++++|||+.+.. ++.+.+..+
T Consensus 262 ~H~l~l~~~~~~~---~~~~~~~~Pp--lr~~~~~~~l~~~l~~G~i~~igtDh~p~~~~~k~~~~~~~~~G~~~~e~~- 335 (444)
T PRK09236 262 VHHLWFDDSDYAR---LGNLIKCNPA--IKTASDREALRQALADDRIDVIATDHAPHTWEEKQGPYFQAPSGLPLVQHA- 335 (444)
T ss_pred hhhhhcCHHHHhc---cCceEEECCC--CCCHHHHHHHHHHHhCCCCcEEECCCCCCCHHHhcCCcccCCCCcccHHHH-
Confidence 3555556655542 3666777775 444 56678999999999999999997651 111122221
Q ss_pred HHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 347 LASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....+... ...+++++++++++|.|||++||+.+ .|+|++|++|
T Consensus 336 l~~l~~~v---------~~~~~~~~~~~~~~t~~pA~~lgl~~-~G~l~~G~~A 379 (444)
T PRK09236 336 LPALLELV---------HEGKLSLEKVVEKTSHAPAILFDIKE-RGFIREGYWA 379 (444)
T ss_pred HHHHHHHH---------HhcCCCHHHHHHHHHHhHHHhcCCCC-CCccccCCcC
Confidence 11111111 13359999999999999999999965 5999999987
No 66
>PRK06189 allantoinase; Provisional
Probab=99.94 E-value=4.5e-25 Score=208.50 Aligned_cols=321 Identities=17% Similarity=0.184 Sum_probs=178.9
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
++++|+|++|+++++ ..+++|+|+||+|++|++... ..+.++||++|++|+|||||+|+|+...
T Consensus 3 ~~~~i~~~~v~~~~~----~~~~~v~i~~G~I~~i~~~~~------~~~~~~iD~~g~~vlPG~ID~H~H~~~~------ 66 (451)
T PRK06189 3 YDLIIRGGKVVTPEG----VYRADIGIKNGKIAEIAPEIS------SPAREIIDADGLYVFPGMIDVHVHFNEP------ 66 (451)
T ss_pred ccEEEECCEEEcCCC----cEEEEEEEECCEEEEecCCCC------CCCCeEEECCCCEEecCEEEeeeccCCC------
Confidence 578999999997542 246899999999999987532 1246899999999999999999998541
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC-cC-----CHHHHHHHHHHcCCeEEEeccccc
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQ-----HVSEMAKAVELLGLRACLVQSTMD 172 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~-~~-----~~~~~~~~~~~~g~~~~~~~~~~~ 172 (400)
.....++... ..+.++++|+|++.++. +. ..+......+........-...+
T Consensus 67 -----------------~~~~~~~~~~----~~~aa~~gGvTt~~~~p~~t~p~~~~~~~~~~~~~~~~~~~~~d~~~~- 124 (451)
T PRK06189 67 -----------------GRTHWEGFAT----GSAALAAGGCTTYFDMPLNSIPPTVTREALDAKAELARQKSAVDFALW- 124 (451)
T ss_pred -----------------CCCCcccHHH----HHHHHHhCCEEEEEECCCCCCCCCCcHHHHHHHHHHhCcCceEeEEEE-
Confidence 0001112222 22568899999999985 11 11222221111111111111111
Q ss_pred CCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeec---cccccCCHHHHHHHHHHHHHcCCeeeEecCCCchh
Q 015784 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGI---RQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (400)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~ 249 (400)
.+ . ......+... +...+...+++++.. ......+...+.++++.+++.+..+.+|+.+....
T Consensus 125 ~~--~--------~~~~~~~l~~----l~~~Gv~~~k~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~e~~~~~ 190 (451)
T PRK06189 125 GG--L--------VPGNLEHLRE----LAEAGVIGFKAFMSNSGTDEFRSSDDLTLYEGMKEIAALGKILALHAESDALT 190 (451)
T ss_pred ec--c--------cccCHHHHHH----HHHcCCcEEEEEccccCCCCcCcCCHHHHHHHHHHHHhcCCeEEEECCChHHH
Confidence 00 0 0111222222 222222233443321 11224566788899999899999999999654321
Q ss_pred hhH---Hhh-------hcCCCC------ChH-HHHhHhCCCCCCeeeEEecCCC-hhHHHHHHhcC--CeEEECccccc-
Q 015784 250 NQV---VMD-------TRKVDH------GTV-TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAG--VKVSHCPASAM- 308 (400)
Q Consensus 250 ~~~---~~~-------~~~~~~------~~~-~~l~~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~--~~~~~~p~~~~- 308 (400)
... +.. .+-..+ ..+ +.+......+.+..+.|..... -+.++.+++.| +.+.+||...+
T Consensus 191 ~~~~~~~~~~g~~~~~~~~~~~P~~~E~~~v~~~l~la~~~g~~~hi~HiSt~~~~~~i~~~k~~g~~vt~ev~ph~L~l 270 (451)
T PRK06189 191 RHLTTQARQQGKTDVRDYLESRPVVAELEAVQRALLYAQETGCPLHFVHISSGKAVALIAEAKKRGVDVSVETCPHYLLF 270 (451)
T ss_pred HHHHHHHHhcCCCChhHccccCCHHHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCcEEEEeCHHHhhc
Confidence 100 000 000000 011 1222222334455555555421 23455555566 44567775321
Q ss_pred ------------------cc-cCcccHHHHHHcCCcEEEcCCCCCCCCC----CCHHHH--------HHHHHHHhccccc
Q 015784 309 ------------------RM-LGFAPIKEMLHADICVSLGTDGAPSNNR----MSIVDE--------MYLASLINKGREV 357 (400)
Q Consensus 309 ------------------~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~----~~~~~~--------~~~~~~~~~~~~~ 357 (400)
+. ....++.+++++|+.++++|||.+.+.. .+++.. ......+...
T Consensus 271 ~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~~i~sDh~p~~~~~K~~~~~~~~~~G~~g~e~~l~~~~~~~--- 347 (451)
T PRK06189 271 TEEDFERIGAVAKCAPPLRSRSQKEELWRGLLAGEIDMISSDHSPCPPELKEGDDFFLVWGGISGGQSTLLVMLTEG--- 347 (451)
T ss_pred CHhHhhCcCCceEEeCCCCChhhHHHHHHHHhCCCceEEECCCCCCCHHHcCcCCcccCCCCceeHHHHHHHHHHHH---
Confidence 11 1223566788999999999999876321 123221 2222222211
Q ss_pred ccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 358 FANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 358 ~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....+++++++++++|.|||++||++ +.|+|++|++|
T Consensus 348 -----~~~~~l~~~~~~~~~t~npA~~lgl~-~~G~l~~G~~A 384 (451)
T PRK06189 348 -----YIERGIPLETIARLLATNPAKRFGLP-QKGRLEVGADA 384 (451)
T ss_pred -----HhcCCCCHHHHHHHHhhhHHHHhCCC-CCCcccCCCcC
Confidence 12345999999999999999999995 46999999987
No 67
>PRK07575 dihydroorotase; Provisional
Probab=99.94 E-value=8.9e-26 Score=212.06 Aligned_cols=314 Identities=17% Similarity=0.225 Sum_probs=177.8
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
++++|+|++|++.++ ...+++|+|+||+|++|++..+. ....++||++|++|+|||||+|+|+...
T Consensus 3 ~~~~i~~~~i~~~~~---~~~~~~I~I~dg~I~~ig~~~~~-----~~~~~vid~~g~~v~PG~ID~H~H~~~~------ 68 (438)
T PRK07575 3 MSLLIRNARILLPSG---ELLLGDVLVEDGKIVAIAPEISA-----TAVDTVIDAEGLTLLPGVIDPQVHFREP------ 68 (438)
T ss_pred ceEEEECCEEECCCC---CEEeeeEEEECCEEEEecCCCCC-----CCCCeEEECCCCEEcccEEEeeeccCCC------
Confidence 468999999997532 23567999999999999975321 1135899999999999999999997431
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC-----HHHHH---HHH-HHcCCeEEEecc
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMA---KAV-ELLGLRACLVQS 169 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~-----~~~~~---~~~-~~~g~~~~~~~~ 169 (400)
...+.++.+..+ +.++++|+|++.++.... .+... +.+ ....++..+...
T Consensus 69 -----------------~~~~~e~~~~~~----~aa~~gGvTt~~dmp~~~p~~~~~~~~~~~~~~a~~~~~v~~~~~~~ 127 (438)
T PRK07575 69 -----------------GLEHKEDLFTAS----RACAKGGVTSFLEMPNTKPLTTTQAALDDKLARAAEKCVVNYGFFIG 127 (438)
T ss_pred -----------------CCcCcchHHHHH----HHHHhCCEEEEEECCCCCCCCCcHHHHHHHHHHhccCcEEEEEEEcc
Confidence 011223333333 457899999999986321 22222 221 111222211110
Q ss_pred cc----------cCCCCCCccc--c-cCCchHHHHHHHHHHHHhccCCCCCeEEE--------------eecccc-----
Q 015784 170 TM----------DCGEGLPASW--A-VRTTDDCIQSQKELYAKHHHAADGRIRIW--------------FGIRQI----- 217 (400)
Q Consensus 170 ~~----------~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~----- 217 (400)
.. ....++.... . ..............++.. ...+... .+....
T Consensus 128 ~~~~~l~~l~~~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~h~e~~~l~~~~~~~~~g~~~~~~~~~ 203 (438)
T PRK07575 128 ATPDNLPELLTANPTCGIKIFMGSSHGPLLVDEEAALERIFAEG----TRLIAVHAEDQARIRARRAEFAGISDPADHSQ 203 (438)
T ss_pred ccccCHHHHHHhhCCeEEEEEEeeCCCCcccCcHHHHHHHHHhC----CCEEEEeCcChHHHHhhhHhhccCcCcccccc
Confidence 00 0000000000 0 000000000011111110 0011100 000000
Q ss_pred ccCCH---HHHHHHHHHHHHcCCeeeE-ecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHH
Q 015784 218 MNATD---RLLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLL 293 (400)
Q Consensus 218 ~~~~~---e~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~ 293 (400)
...+. +.+.+++++|++.+.++++ |+. +....+.+.+.. ...+.. -++.|..+++++++..
T Consensus 204 ~~p~~aE~~av~~~~~la~~~g~~lhi~HiS-t~~~v~~i~~~k------------~~~vt~-ev~phhL~l~~~~~~~- 268 (438)
T PRK07575 204 IQDEEAALLATRLALKLSKKYQRRLHILHLS-TAIEAELLRQDK------------PSWVTA-EVTPQHLLLNTDAYER- 268 (438)
T ss_pred cCcHHHHHHHHHHHHHHHHHHCCCEEEEECC-CHHHHHHHHHhc------------CCCEEE-EEchhhheeCHHHHhC-
Confidence 01111 4567788888888888888 876 544333332211 011111 2334446667776652
Q ss_pred HhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCCC----------CCCH-HHHHHHHHHHhcccccccCC
Q 015784 294 SRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNN----------RMSI-VDEMYLASLINKGREVFANG 361 (400)
Q Consensus 294 ~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~----------~~~~-~~~~~~~~~~~~~~~~~~~~ 361 (400)
.+....++|. ++. .++.++.+++++|+.++++|||.|++. ...+ ..++.+...+...
T Consensus 269 --~~~~~k~~PP--LR~~~d~~~L~~~l~~G~id~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~l~~l~~~~------- 337 (438)
T PRK07575 269 --IGTLAQMNPP--LRSPEDNEALWQALRDGVIDFIATDHAPHTLEEKAQPYPNSPSGMPGVETSLPLMLTAA------- 337 (438)
T ss_pred --CCceEEEeCC--CCCHHHHHHHHHHHhCCCCCEEecCCCCCCHHHccCCcccCCCCcccHHHHHHHHHHHH-------
Confidence 4666677777 565 667889999999999999999987642 1222 3445554444331
Q ss_pred CCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 362 TTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 362 ~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....++++++++++|.|||++||+.+ .|+|++|++|
T Consensus 338 --~~~~lsl~~~~~~~s~npAk~lgl~~-~G~L~~G~~A 373 (438)
T PRK07575 338 --MRGKCTVAQVVRWMSTAVARAYGIPN-KGRIAPGYDA 373 (438)
T ss_pred --hcCCCCHHHHHHHHhhhHHHHcCCCC-CCccCCCCcC
Confidence 13459999999999999999999965 4999999987
No 68
>TIGR01178 ade adenine deaminase. The family described by this model includes an experimentally characterized adenine deaminase of Bacillus subtilis. It also include a member from Methanobacterium thermoautotrophicum, in which adenine deaminase activity has been detected.
Probab=99.94 E-value=4.7e-25 Score=209.91 Aligned_cols=298 Identities=17% Similarity=0.206 Sum_probs=177.6
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+++|+|++|+++.+. ....++|+|+||+|++|++.. +.++||++|++|+|||||+|+|+..+
T Consensus 1 dlli~n~~ivd~~~~--~~~~~dI~I~~g~I~~ig~~~---------~~~viDa~G~~v~PG~ID~H~Hi~~~------- 62 (552)
T TIGR01178 1 DIVIKNAKIIDVYNG--EIIPGDIAIANGHIAGVGKYN---------GVKVIDALGEYAVPGFIDAHIHIESS------- 62 (552)
T ss_pred CEEEEeeEEEeCCCC--cEEeeeEEEECCEEEEecCCC---------CCeEEECCCCEEEeCeEecccccCCC-------
Confidence 478999999975433 335679999999999998641 35899999999999999999999651
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC--------CHHHHHHHHHHcCCeEEEecccc
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLGLRACLVQSTM 171 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~ 171 (400)
..++++ +. ..++.+|+|++.++... .++.+.+.++...++.+....
T Consensus 63 -----------------~~~~~~-~~------~~al~~GvTtvv~~P~~~~~v~g~~~~~~~~~~a~~~~~d~~~~~~-- 116 (552)
T TIGR01178 63 -----------------MLTPSE-FA------KLVLPHGVTTVVSDPHEIANVNGEDGINFMLNNAKKTPLNFYFMLP-- 116 (552)
T ss_pred -----------------CCChhH-HH------HHHHCCCEEEEEcCCCCCCCCCCHHHHHHHHHHhhcCCcEEEEECC--
Confidence 112222 11 34799999999985422 233445555555565433221
Q ss_pred cCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhh
Q 015784 172 DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQ 251 (400)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~ 251 (400)
.+.+..+.++.+. .-..++..++++. ..--.++.++........+++.++.+ +.+++.|..+..|+..-...
T Consensus 117 s~vp~~~~e~~g~--~~~~~~i~~~~~~---~~V~glke~m~~~~v~~~d~~~l~~i-~~a~~~g~~I~gHap~l~~~-- 188 (552)
T TIGR01178 117 SCVPALQFETSGA--VLTAEDIDELMEL---DEVLGLAEVMDYPGVINADIEMLNKI-NSARKRNKVIDGHCPGLSGK-- 188 (552)
T ss_pred CCCCCCcccCCCC--ccCHHHHHHHHcC---CCccEEEEEecchhhcCCCHHHHHHH-HHHHhCCCEEEecCCCCCHH--
Confidence 1111111111111 1112233333321 11122444444333334455555544 78899999999998643321
Q ss_pred HHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECcccccc-ccCcccHHHHHHcCCcEEEcC
Q 015784 252 VVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMR-MLGFAPIKEMLHADICVSLGT 330 (400)
Q Consensus 252 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~Gv~v~~gt 330 (400)
.+..+...| ....|+.. +.++...-.+.|+.+...-.+..+ +....++-.. +.+.+++++|
T Consensus 189 -----------eL~~~~~aG-----i~~dHe~~-s~~ea~e~~~~Gm~~~ir~gs~~~n~~~~~~~~~~-~~~~~~~l~T 250 (552)
T TIGR01178 189 -----------LLNKYISAG-----ISNDHEST-SIEEAREKLRLGMKLMIREGSAAKNLEALHPLINE-KNCRSLMLCT 250 (552)
T ss_pred -----------HHHHHHHcC-----CCCCcCcC-CHHHHHHHHHCCCEEEEeCCccccCHHHHHHHHhh-cCCceEEEEe
Confidence 222223333 23568766 566666666889888765444322 1222222211 3568999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 331 DGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 331 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
|... ..+++.+......+.++. ..++++++|++|+|.|||+++|+++ .|+|++|+.|
T Consensus 251 D~~~---~~~~~~~g~l~~~v~~ai---------~~g~~~~~Al~maT~npA~~lgl~~-~G~I~pG~~A 307 (552)
T TIGR01178 251 DDRH---VNDILNEGHINHIVRRAI---------EHGVDPFDALQMASINPAEHFGIDV-GGLIAPGDPA 307 (552)
T ss_pred CCCC---hhHHHhcCCHHHHHHHHH---------HcCCCHHHHHHHHHHHHHHHcCCCC-CcccCCCCcC
Confidence 9532 233444333322222211 2358999999999999999999986 6999999987
No 69
>cd00375 Urease_alpha Urease alpha-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide. Nickel-dependent ureases are found in bacteria, fungi and plants. Their primary role is to allow the use of external and internally generated urea as a nitrogen source. The enzyme consists of 3 subunits, alpha, beta and gamma, which can be fused and present on a single protein chain and which in turn forms multimers, mainly trimers. The large alpha subunit is the catalytic domain containing an active site with a bi-nickel center complexed by a carbamylated lysine. The beta and gamma subunits play a role in subunit association to form the higher order trimers.
Probab=99.94 E-value=7.1e-25 Score=202.98 Aligned_cols=316 Identities=19% Similarity=0.208 Sum_probs=174.6
Q ss_pred CCCCCCCCCC-CCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhh--h-----hhhccCCCcEEeCCCcE
Q 015784 6 SGGGSSSGSL-GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADI--L-----QQFSQMADQIIDLQSQI 77 (400)
Q Consensus 6 ~~~~~~~~~~-~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~--~-----~~~~~~~~~viD~~g~~ 77 (400)
.|++.++... ....+++|+|++|++.. . +.+++|.|+||+|++|++.... . ......++++||++|++
T Consensus 51 ~g~~~~~~~~~~~~~DlVI~Na~IiD~~---g-i~~adI~IkdGrIvaIG~agnp~~~~~v~~~~~~g~~teVIDaeG~i 126 (567)
T cd00375 51 DGMGQSSGYTREDVLDLVITNALIIDYT---G-IYKADIGIKDGRIVAIGKAGNPDIMDGVTPNMIVGPSTEVIAGEGKI 126 (567)
T ss_pred cCCCCCCCCCccccCCEEEECeEEECCC---C-cEEEEEEEECCEEEEEecCCCccccccccccccCCCCCeEEECCCCE
Confidence 4555544443 34568999999999743 2 3467999999999999975321 0 01122356899999999
Q ss_pred eeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC--c--------
Q 015784 78 LLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--G-------- 147 (400)
Q Consensus 78 v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~--~-------- 147 (400)
|+|||||+|+|+.. +.+ .+.++.+||||+.+++ +
T Consensus 127 V~PG~ID~HvH~~~------------------------P~~------------~~aAlagGVTTvI~~G~gP~~gtnatp 170 (567)
T cd00375 127 VTAGGIDTHVHFIC------------------------PQQ------------IEEALASGITTMIGGGTGPAAGTKATT 170 (567)
T ss_pred EeeceEECccCCCC------------------------ccH------------HHHHHcCCCcEEEcCCcCcccccCCCC
Confidence 99999999999843 100 1458999999999962 1
Q ss_pred -----CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCH
Q 015784 148 -----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATD 222 (400)
Q Consensus 148 -----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (400)
..+..+.+.++...+...+.. .+ ....+.+..+. ... +.+. +..+..+..++
T Consensus 171 ~t~g~~~l~~ml~aa~~~pin~g~~g----kg-----------~~~~l~eL~e~----~~a--GA~G--fK~~eD~g~t~ 227 (567)
T cd00375 171 CTPGPWNIKRMLQAADGLPVNIGFLG----KG-----------NGSSPDALAEQ----IEA--GACG--LKLHEDWGATP 227 (567)
T ss_pred CCCCHHHHHHHHHHhhcCCceEEEEe----cC-----------ccccHHHHHHH----HHc--CCEE--EEecCCCCCCH
Confidence 112333444443333221110 01 00112222222 122 2222 22223345688
Q ss_pred HHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC----hhHHHHHHhcCC
Q 015784 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN----HTEIGLLSRAGV 298 (400)
Q Consensus 223 e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~----~~~i~~~~~~~~ 298 (400)
..+.++++.|+++++++.+|+..-.+. . .+|. ......+......|..... ++-++.....++
T Consensus 228 ~~i~~aL~~A~~~dv~VaiHadtlne~-g-----------~~E~-t~aa~~gr~iH~~H~egaggghapdi~~~~~~~nv 294 (567)
T cd00375 228 AAIDTCLSVADEYDVQVAIHTDTLNES-G-----------FVED-TIAAIKGRTIHTYHTEGAGGGHAPDIIKVAGHPNV 294 (567)
T ss_pred HHHHHHHHHHHhhCCEEEEECCCCCcc-h-----------HHHH-HHHHhcCCeEEEEecCCCCcccchHHHHhcCCCCc
Confidence 899999999999999999999643321 1 2221 1111122222222322211 222232222233
Q ss_pred eE-EECccc----c-----------------------------ccccCcccHHHHHHcCCcEEEcCCCCCCCCCCCH-HH
Q 015784 299 KV-SHCPAS----A-----------------------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSI-VD 343 (400)
Q Consensus 299 ~~-~~~p~~----~-----------------------------~~~~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~-~~ 343 (400)
.. +..|.- | .|.+.++.-..|.+.|+...++||+...+..... .+
T Consensus 295 lp~stnpt~p~t~nt~~e~~dm~m~~h~l~~~~~~d~~fa~srir~~ti~ae~~l~d~G~~s~~~sDs~~mgr~ge~~~r 374 (567)
T cd00375 295 LPSSTNPTRPFTVNTLDEHLDMLMVCHHLDPNIPEDVAFAESRIRAETIAAEDVLHDLGAISIMSSDSQAMGRVGEVILR 374 (567)
T ss_pred ccCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhhhhhhhccchhhccchhhhccCcEEEEccchhhcCccceeeec
Confidence 21 222210 0 0112333445688999999999998633222222 22
Q ss_pred HHHHHHHHhcccccccCCCCCCCCCCHHHH---HHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 344 EMYLASLINKGREVFANGTTDPAALPAETV---LRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a---l~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
..+.+..+.+.+.... .+....+...+ |+++|.|||+++|+++++|+|++||.|
T Consensus 375 ~~q~a~k~~~~~g~~~---~~~~~~~n~r~~~~L~~~Tin~A~alG~~~~vGSLe~GK~A 431 (567)
T cd00375 375 TWQTAHKMKAQRGPLP---EDSGDADNFRVKRYIAKYTINPAIAHGISHEVGSVEVGKLA 431 (567)
T ss_pred hHHHHHHHHHhcCCCC---cccccCchHHHHHHHHHhhHHHHHHcCcccCceeeCCCCcc
Confidence 2233322222111110 11112455455 999999999999999999999999987
No 70
>cd00854 NagA N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.
Probab=99.94 E-value=9.7e-26 Score=207.64 Aligned_cols=318 Identities=24% Similarity=0.237 Sum_probs=189.9
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|+++ ....+.+|+|+||+|++|++..+. + ...++||++|++|+|||||+|+|....
T Consensus 1 ~~i~~~~v~~~----~~~~~~~i~i~~g~I~~i~~~~~~----~-~~~~vid~~g~~l~PG~iD~H~H~~~g-------- 63 (374)
T cd00854 1 LIIKNARILTP----GGLEDGAVLVEDGKIVAIGPEDEL----E-EADEIIDLKGQYLVPGFIDIHIHGGGG-------- 63 (374)
T ss_pred CEEEeEEEeCC----CEEcccEEEEECCEEEEecCCCCc----c-cCCcEEECCCCEecccEEEeeecccCC--------
Confidence 47999999974 355788999999999999875432 1 235899999999999999999998541
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC-HHHH---HHH---HHHcC--CeEEEecccc
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-VSEM---AKA---VELLG--LRACLVQSTM 171 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~-~~~~---~~~---~~~~g--~~~~~~~~~~ 171 (400)
.++ ...+.++ + ....+.+++.|||++.++.... .+.+ .+. ..+.+ .+. .+++
T Consensus 64 ~~~------------~~~~~e~-~---~~~~~~~~~~GvTtv~~t~~t~~~~~~~~~l~~~~~~~~~~~g~~~---~g~h 124 (374)
T cd00854 64 ADF------------MDGTAEA-L---KTIAEALAKHGTTSFLPTTVTAPPEEIAKALAAIAEAIAEGQGAEI---LGIH 124 (374)
T ss_pred CCC------------CCCCHHH-H---HHHHHHHHccCcceeeccccCCCHHHHHHHHHHHHHHhhcCCCCee---EEEe
Confidence 000 0111121 1 2234678999999999876222 2221 111 11111 222 1234
Q ss_pred cCCCCCCcccccCCchHHHH-HHHHHHHHhccCCCCCeEEEeeccccccCCHHHH--HHHHHHHHHcCCeee-EecCCCc
Q 015784 172 DCGEGLPASWAVRTTDDCIQ-SQKELYAKHHHAADGRIRIWFGIRQIMNATDRLL--LETRDMAREFKTGIH-MHVAEIP 247 (400)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l--~~~~~~a~~~~~~v~-~H~~~~~ 247 (400)
..|++++..+.+..+...+. ...+.++++.....+.++++ +++||.. .++++.++++|+.+. .|..-+.
T Consensus 125 leGP~~~~~~~g~h~~~~~~~~~~~~~~~~~~~~~~~ik~~-------tlaPE~~~~~~~i~~~~~~gi~v~~GH~~a~~ 197 (374)
T cd00854 125 LEGPFISPEKKGAHPPEYLRAPDPEELKKWLEAAGGLIKLV-------TLAPELDGALELIRYLVERGIIVSIGHSDATY 197 (374)
T ss_pred eecCccCcccCCCCCHHHcCCcCHHHHHHHHHhcCCCEEEE-------EECCCCCChHHHHHHHHHCCeEEEeeCCcCCH
Confidence 56666665554443332211 12233344433334677765 3445555 788899999999995 8876432
Q ss_pred hhh-hHHhhhcCCCCChHHHHh---------HhCC----CC-C--Ce-eeEEecCCChhHHHHHHhcC--CeEEECcccc
Q 015784 248 YEN-QVVMDTRKVDHGTVTFLD---------KIEF----LQ-N--NL-LSAHTVWVNHTEIGLLSRAG--VKVSHCPASA 307 (400)
Q Consensus 248 ~~~-~~~~~~~~~~~~~~~~l~---------~~~~----~~-~--~~-~~~h~~~~~~~~i~~~~~~~--~~~~~~p~~~ 307 (400)
... +.+.. | ...++++. ..+. +. . -. ++.|+.|+++++++.+.+.. -.+..++.++
T Consensus 198 ~~~~~a~~~--G--~~~~tH~~n~m~~~~~r~~~~~~a~l~~~~~~~~li~dg~Hv~~~~~~~~~r~~g~~~~~lvtD~~ 273 (374)
T cd00854 198 EQAVAAFEA--G--ATHVTHLFNAMSPLHHREPGVVGAALSDDDVYAELIADGIHVHPAAVRLAYRAKGADKIVLVTDAM 273 (374)
T ss_pred HHHHHHHHc--C--CCeeeECCCCCCCcCCCCCcHHHHhhcCCCCeEEEEcCCCcCCHHHHHHHHHhcCCCcEEEEeccc
Confidence 111 21111 1 11111110 0000 11 1 12 67899999999999998874 4577777765
Q ss_pred ccc---cCcccHHHH--HHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHH
Q 015784 308 MRM---LGFAPIKEM--LHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGA 382 (400)
Q Consensus 308 ~~~---~~~~~~~~~--~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A 382 (400)
... .+.+++... ...+..+.+.+|.... +..++.+.++.+.... +++++++++++|.|||
T Consensus 274 ~~~G~~~g~y~~~~~~~~~~~~~~~~~~g~laG-~~~~l~~~~~~l~~~~--------------~l~~~~al~~aT~npA 338 (374)
T cd00854 274 AAAGLPDGEYELGGQTVTVKDGVARLADGTLAG-STLTMDQAVRNMVKWG--------------GCPLEEAVRMASLNPA 338 (374)
T ss_pred cccCCCCCeEEECCEEEEEECCEEEcCCCCeee-hHhhHHHHHHHHHHhh--------------CCCHHHHHHHHhHHHH
Confidence 432 234443221 0112233344444333 4466777787765332 4899999999999999
Q ss_pred HHcCCCCCccccccCcCC
Q 015784 383 KSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 383 ~~lg~~~~~G~i~~G~~A 400 (400)
+++|++++.|+|++|+.|
T Consensus 339 ~~lg~~~~~G~i~~G~~A 356 (374)
T cd00854 339 KLLGLDDRKGSLKPGKDA 356 (374)
T ss_pred HHcCCCCCcCCcCCCCcC
Confidence 999999778999999987
No 71
>KOG2584 consensus Dihydroorotase and related enzymes [Nucleotide transport and metabolism]
Probab=99.94 E-value=1.4e-26 Score=201.23 Aligned_cols=342 Identities=14% Similarity=0.170 Sum_probs=214.6
Q ss_pred cccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccc
Q 015784 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (400)
Q Consensus 18 ~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~ 97 (400)
+.+++|+|++|++-+ .. ...+|+++||.|++|+++..++ .+.++||+.|+.|+||.||.|+|+-.
T Consensus 13 s~rllikgg~vvN~d--~~--~~aDV~vedGiI~~vg~~l~ip-----gg~~~ida~g~~ViPGgID~Hthlq~------ 77 (522)
T KOG2584|consen 13 SNRLLIKGGRVVNDD--QS--FKADVYVEDGIIKEVGENLIIP-----GGVKVIDATGKMVIPGGIDPHTHLQM------ 77 (522)
T ss_pred ccceeeeCCEEEccC--Cc--eeeeEEeccCEEEEecccEEcC-----CCceEEecCCcEEecCccCccceecc------
Confidence 356899999999633 34 4569999999999999986542 36899999999999999999999965
Q ss_pred cCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc-CCHHHHHHHHHHcCCeEEEecccccCCCC
Q 015784 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-QHVSEMAKAVELLGLRACLVQSTMDCGEG 176 (400)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 176 (400)
|+....+.++++.++ ++++++|+|.+.|+.- ..-..+.++.++..- ..-+..+-+.+..
T Consensus 78 ---------------p~~G~ts~DdF~~GT----kAAlaGGtTmiID~vlp~~~~slv~afe~wr~-~Ad~k~cCDyglh 137 (522)
T KOG2584|consen 78 ---------------PFMGMTSVDDFFQGT----KAALAGGTTMIIDFVLPDKGTSLVEAFEKWRE-WADPKVCCDYGLH 137 (522)
T ss_pred ---------------ccCCccchhhhhccc----HHHhcCCceEEEEEecCCCCchHHHHHHHHHh-hcCCceeeeeeee
Confidence 444666777877777 7899999999999741 111122222222100 0112233333332
Q ss_pred CCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhh
Q 015784 177 LPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256 (400)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~ 256 (400)
..-.| |...+.+..+.+.+ ..+...++++++....+.+++++|.++++.+++.|....+|+...+...+..+.+
T Consensus 138 v~It~----W~~~v~eem~~l~~--ekGvnsF~~fmayk~~~~v~d~~lye~l~~~~~lgala~vHAEngd~iae~q~~~ 211 (522)
T KOG2584|consen 138 VGITW----WSPSVKEEMEILVK--EKGVNSFKFFMAYKDLYMVRDSELYEALKVCAELGALAMVHAENGDAIAEGQQRL 211 (522)
T ss_pred Eeeee----cCcchHHHHHHHhh--hcCcceEEeeeeeccccccCHHHHHHHHHHHhhcchhheehhhcchhhhhhhhHH
Confidence 22211 22334444444442 3344567788899999999999999999999999999999997665544333322
Q ss_pred cCCCC---------C-------hH-HHHhHhCCCCCCeeeEEecCCChhH-HHHHHhcCCeEEECccccc----------
Q 015784 257 RKVDH---------G-------TV-TFLDKIEFLQNNLLSAHTVWVNHTE-IGLLSRAGVKVSHCPASAM---------- 308 (400)
Q Consensus 257 ~~~~~---------~-------~~-~~l~~~~~~~~~~~~~h~~~~~~~~-i~~~~~~~~~~~~~p~~~~---------- 308 (400)
...+- + .+ +.+.-....+.+..++|..+.+..+ |...+++|..+.-.|..+.
T Consensus 212 l~~gitgPEgh~lSRPee~EaEA~~rai~ia~~~ncPlyvvhVmsksaa~~Ia~aRk~g~~v~gepita~l~~dg~hy~~ 291 (522)
T KOG2584|consen 212 LELGITGPEGHELSRPEELEAEATNRAITIARQANCPLYVVHVMSKSAADAIALARKKGRVVFGEPITASLGTDGSHYWS 291 (522)
T ss_pred HHcCCcCcccccccCchhhhHHHHHHHHHHHHhcCCCcceEEEeehhHHHHHHHHHhcCceeecccchhhhcccchhhcc
Confidence 21100 0 11 2233334455677889998876554 5555554554444443211
Q ss_pred -------ccc----------CcccHHHHHHcCCcEEEcCCCCCCCCC------CCHHHHHHHHHHHhcccccccCCCCCC
Q 015784 309 -------RML----------GFAPIKEMLHADICVSLGTDGAPSNNR------MSIVDEMYLASLINKGREVFANGTTDP 365 (400)
Q Consensus 309 -------~~~----------~~~~~~~~~~~Gv~v~~gtD~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (400)
++. ...-+..++..|..-..||||.+++.. -|+......-.-+.-..++.++.....
T Consensus 292 ~~w~~Aa~~v~sPPlr~d~~t~~~L~~lLa~g~L~~tgSdhctf~~~qKalgKddFt~ip~GvnGvedrMsviwekgv~~ 371 (522)
T KOG2584|consen 292 KDWDHAAAFVTSPPLRPDPTTPDGLMDLLAEGDLQLTGSDHCTFTTEQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHS 371 (522)
T ss_pred CChhhcceeeeCCCCCCCCCCHHHHHHHHhcCccceeecCCCCCCHHHHhhccCccccCCCccccccccceeeeehhccc
Confidence 000 111245678899999999999876320 011100000000000011222223445
Q ss_pred CCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 366 AALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 366 ~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
..+++.+.+.-.++|+|+++++..|+|+|++|.+|
T Consensus 372 G~md~~~fVavtstnaAkifnlYprKGrIavGsDA 406 (522)
T KOG2584|consen 372 GKMDENRFVAVTSTNAAKIFNLYPRKGRIAVGSDA 406 (522)
T ss_pred CccCcccEEEEecccchhheeccCcCceecccCCC
Confidence 66889999999999999999999999999999987
No 72
>PRK13308 ureC urease subunit alpha; Reviewed
Probab=99.94 E-value=1.7e-24 Score=200.51 Aligned_cols=311 Identities=19% Similarity=0.219 Sum_probs=174.3
Q ss_pred CCCCCCCCCCC--CCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhh--hhh-----hccCCCcEEeCCC
Q 015784 5 SSGGGSSSGSL--GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADI--LQQ-----FSQMADQIIDLQS 75 (400)
Q Consensus 5 ~~~~~~~~~~~--~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~--~~~-----~~~~~~~viD~~g 75 (400)
+.|++.++... ....+++|+|++|+++.. . +.+++|.|+||+|++|++.... ... ....++++||++|
T Consensus 52 r~g~~~~~~~~~~~~~~DlVItNa~IIDp~~--G-i~kaDIgIkDGrIaaIG~~~npd~~~gv~p~~~~g~~teVIDaeG 128 (569)
T PRK13308 52 RDGMGMAPGVTSADGALDFVLCNVTVIDPVL--G-IVKGDIGIRDGRIVGIGKAGNPDIMDGVDPRLVVGPGTDVRPAEG 128 (569)
T ss_pred ccCCCCCCCCCCccCcCCEEEECeEEEcCCC--C-eEEeEEEEECCEEEEecCCCCccccccccccccCCCCCeEEECCC
Confidence 34555544333 245689999999997432 2 3578999999999999975321 000 0113568999999
Q ss_pred cEeeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC--c------
Q 015784 76 QILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--G------ 147 (400)
Q Consensus 76 ~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~--~------ 147 (400)
++|+|||||+|+|+.. .. . .+.++.+||||+.+++ +
T Consensus 129 ~IVtPG~ID~HVH~~~------------------------Pg------~------~~aALagGVTTVi~gg~gPt~p~~t 172 (569)
T PRK13308 129 LIATPGAIDVHVHFDS------------------------AQ------L------VDHALASGITTMLGGGLGPTVGIDS 172 (569)
T ss_pred CEEEeCEEEeeeCCCC------------------------cc------H------HHHHHcCCCcEEecCCcCCCCCCCC
Confidence 9999999999999843 10 0 0458999999999852 1
Q ss_pred CC---HHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHH
Q 015784 148 QH---VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRL 224 (400)
Q Consensus 148 ~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 224 (400)
.. +..+.+.++...+.... +..+ ......+..+. ...+...++ .+..+..+++.
T Consensus 173 ~g~~~i~~~l~aa~~~pvN~g~----~gkG-----------~~s~~aeL~el----i~aGA~GfK----i~ed~g~t~~~ 229 (569)
T PRK13308 173 GGPFNTGRMLQAAEAWPVNFGF----LGRG-----------NSSKPAALIEQ----VEAGACGLK----IHEDWGAMPAA 229 (569)
T ss_pred CCHHHHHHHHHHHhcCCccEEE----EcCC-----------cccCHHHHHHH----HHCCCCEEe----ecCCCCCCHHH
Confidence 11 23334444332222211 1011 00112222222 222212222 22333557889
Q ss_pred HHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC----ChhHHHHHHhcCCeE
Q 015784 225 LLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV----NHTEIGLLSRAGVKV 300 (400)
Q Consensus 225 l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~----~~~~i~~~~~~~~~~ 300 (400)
+..+++.|+++++++.+|+..-.+. . .+|. ......+...-+.|.... .++-++.....++..
T Consensus 230 i~~aL~~A~~~dv~VaiHadtlne~-g-----------~~E~-t~~a~~gr~iH~~H~egaggghapd~l~~~~~~n~lp 296 (569)
T PRK13308 230 IDTCLEVADEYDFQVQLHTDTLNES-G-----------FVED-TLAAIGGRTIHMYHTEGAGGGHAPDIIRVVGEPHCLP 296 (569)
T ss_pred HHHHHHHHHhcCCEEEEeCCCcCcc-h-----------HHHH-HHHHhcCCeEEEEeccCCccCchhHHHHHhCCCCccC
Confidence 9999999999999999999753321 1 2221 111111222222332221 123333333334332
Q ss_pred -EECccc----c-----------------------------ccccCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHH
Q 015784 301 -SHCPAS----A-----------------------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMY 346 (400)
Q Consensus 301 -~~~p~~----~-----------------------------~~~~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~ 346 (400)
+..|.- | .|.+.++.-..|.+.|+...++||+...+ -+...++
T Consensus 297 ~stnpt~p~t~nt~~e~~dm~m~~h~l~~~~~~d~afa~srir~~ti~ae~~l~d~g~~s~~~sds~~mg---r~~e~i~ 373 (569)
T PRK13308 297 SSTNPTNPYTVNTFDEHLDMTMVCHHLNPDVPEDVAFAESRIRAQTIAAEDVLHDIGAISMLGSDSQGMG---RIAEVIA 373 (569)
T ss_pred CCCCCCCCCccCchhhhcCeEEEecCCCCCCcchhhhhhhhccceeeccCchhhcCCcEEEEecchHHHh---HHHHHHH
Confidence 222220 0 01122333355889999999999987442 1334443
Q ss_pred HHH-HHhcccccccCCCCCCCCCCHHH-----------HHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 347 LAS-LINKGREVFANGTTDPAALPAET-----------VLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 347 ~~~-~~~~~~~~~~~~~~~~~~l~~~~-----------al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
... ...++.. +...++.++ +|+++|.|||+++|+++++|+|++||.|
T Consensus 374 r~~q~a~~~~~-------~~g~l~~~~~~~~dn~rv~r~L~~~T~npA~alGi~~~vGsLe~Gk~A 432 (569)
T PRK13308 374 RTWQLASKMKD-------QRGPLPEDRGTFADNARIKRYIAKYTINPAITFGIDDHIGSLEPGKLA 432 (569)
T ss_pred HHHHHHHHHhh-------cCCCCCcccccCCchhhhhHHHHHHhHHHHHHcCCCCCceeeCCCCcC
Confidence 322 2222221 122244443 6999999999999999989999999987
No 73
>COG1820 NagA N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=99.94 E-value=1.7e-25 Score=196.51 Aligned_cols=321 Identities=19% Similarity=0.242 Sum_probs=194.2
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
.+|+|++|+++. .++.++.+.|+||+|.+|.+ .+. | .+.+++|.+|.+|+|||||+|+|... +
T Consensus 2 ~~~~~~~i~t~~---~~~~~~~v~i~dg~I~~i~~-~~~----p-~~~e~id~~G~~l~PGfID~hihG~g--------G 64 (380)
T COG1820 2 YALKNGRIFTGH---GVLDGGAVVIEDGKIEAVVP-AEL----P-ADAEIIDLKGALLVPGFIDLHIHGGG--------G 64 (380)
T ss_pred ceeeccEEEcCc---ceEECcEEEEcCCEEEEEec-CcC----C-CcceeecCCCCEecccEEEEeecCcC--------c
Confidence 478999999864 57888899999999999998 332 2 36799999999999999999999976 1
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC-cCCHHHH-------HHHHHHcCCeEEEeccccc
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQHVSEM-------AKAVELLGLRACLVQSTMD 172 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~-~~~~~~~-------~~~~~~~g~~~~~~~~~~~ 172 (400)
.++ .+.........-++..++.|+|++.... ....+.+ .+.... ......+++-
T Consensus 65 ~~~---------------~D~~~~~~l~~i~~~~~~~GtTsfLpT~iT~~~e~i~~al~~~~e~~~~---~ga~ilGiHL 126 (380)
T COG1820 65 ADF---------------MDAGSVETLETMAEAHLRHGTTSFLPTLITASLEKIKAALRAIREAIAK---GGAQILGIHL 126 (380)
T ss_pred ccc---------------cCccCHHHHHHHHHHhhhcCeeeeeeecccCCHHHHHHHHHHHHHHHhc---cCCceEEEEe
Confidence 111 1101111222244668889999999732 2222222 222221 1112245677
Q ss_pred CCCCCCcccccCCchHHHH-HHHHHHHHhccCCCCCeEEE-eeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhh
Q 015784 173 CGEGLPASWAVRTTDDCIQ-SQKELYAKHHHAADGRIRIW-FGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (400)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (400)
+||++++.+.+.++...+. ...+.++.+....++.++.+ +.|. ..-+ .++++.+.+.|+.+.+-..+...+
T Consensus 127 EGP~ls~~kkGAh~~~~ir~~~~~~~~~~~~~a~g~i~~vTlAPE--~~~~----~e~i~~l~~~giivs~GHS~Atye- 199 (380)
T COG1820 127 EGPFLSPEKKGAHNPEYIRPPDPEELEQLIAAADGLIKLVTLAPE--LDGT----KELIRLLANAGIVVSIGHSNATYE- 199 (380)
T ss_pred ecCccCHhhccCCCHHHhCCCCHHHHHHHHhhccCceEEEEECCC--CCCC----HHHHHHHHhCCeEEEecCccccHH-
Confidence 8999999999998887765 55566777777666544432 2221 1112 344455566666655443333222
Q ss_pred hHHhhhcCCCCChH-HHH--------hHhCCCCC--------CeeeEEecCCChhHHHHHHhcC----CeEEECcccccc
Q 015784 251 QVVMDTRKVDHGTV-TFL--------DKIEFLQN--------NLLSAHTVWVNHTEIGLLSRAG----VKVSHCPASAMR 309 (400)
Q Consensus 251 ~~~~~~~~~~~~~~-~~l--------~~~~~~~~--------~~~~~h~~~~~~~~i~~~~~~~----~~~~~~p~~~~~ 309 (400)
...+.+..+...+ ..+ ++.|+.+. --+|..+.|+.+..++.+.+.. +.++.--....-
T Consensus 200 -~~~~a~~~Ga~~~THlfNaMs~l~hREPGvvGA~L~~~~~~~eiIaDG~HVhP~~~~ia~~~kg~~~i~LVTDam~a~G 278 (380)
T COG1820 200 -QARAAFEAGATFVTHLFNAMSGLHHREPGVVGAALDNPDVYAEIIADGVHVHPAAIRLALKAKGGDKIVLVTDAMAAAG 278 (380)
T ss_pred -HHHHHHHhCccEEEeeccCCCCCCCCCCcccceeecCCCeEEEEEccCcccCHHHHHHHHhccCCceEEEEEccccccC
Confidence 1211111111111 111 22232221 1267788899999988877754 222221111111
Q ss_pred c-cCcccHHH---HHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 015784 310 M-LGFAPIKE---MLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385 (400)
Q Consensus 310 ~-~~~~~~~~---~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~l 385 (400)
+ .+.+.+.- -.+.| .+.-.|+...++.+++...++....+. +++++||++|+|.+||++|
T Consensus 279 ~~dg~y~lgg~~V~v~~g--~~~~~~GtLAGS~Ltm~~avrn~v~~~--------------~~~~~eAv~maS~~PA~~l 342 (380)
T COG1820 279 LPDGEYILGGQTVTVADG--ARRLEDGTLAGSTLTMDEAVRNLVEWG--------------GISLAEAVRMASLNPAKAL 342 (380)
T ss_pred CCCccEEECCEEEEEECC--EEECCCCceeeeeeeHHHHHHHHHHHh--------------CCCHHHHHHHhhhhHHHHh
Confidence 1 12221110 11223 444455554456788888888877554 4899999999999999999
Q ss_pred CCCCCccccccCcCC
Q 015784 386 LWDNDIGSLEAGKKV 400 (400)
Q Consensus 386 g~~~~~G~i~~G~~A 400 (400)
|+++++|+|++||+|
T Consensus 343 gl~~~~G~i~~G~~A 357 (380)
T COG1820 343 GLDDRLGSIKPGKDA 357 (380)
T ss_pred CCcCcccccCCCccc
Confidence 999999999999987
No 74
>PRK07369 dihydroorotase; Provisional
Probab=99.93 E-value=7.3e-24 Score=196.94 Aligned_cols=320 Identities=15% Similarity=0.120 Sum_probs=178.5
Q ss_pred cccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccc
Q 015784 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (400)
Q Consensus 18 ~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~ 97 (400)
+.+++|+|++|+++.+. ....++|+|+||+|++|++.... +..+.++||++|++|+|||||+|+|+...
T Consensus 1 ~~~~~i~n~~v~d~~~~--~~~~~~v~I~dg~I~~i~~~~~~----~~~~~~~iDa~G~~vlPG~ID~H~H~~~~----- 69 (418)
T PRK07369 1 MSNELLQQVRVLDPVSN--TDRIADVLIEDGKIQAIEPHIDP----IPPDTQIIDASGLILGPGLVDLYSHSGEP----- 69 (418)
T ss_pred CCCEEEeCeEEECCCCC--cccceeEEEECCEEEEecCCccc----CCCCCEEEECCCCEEecCEEecccccCCC-----
Confidence 45789999999964332 23668999999999999864321 11246899999999999999999998541
Q ss_pred cCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC-----HHHH---HHHHHHcC-CeEEEec
Q 015784 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEM---AKAVELLG-LRACLVQ 168 (400)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~-----~~~~---~~~~~~~g-~~~~~~~ 168 (400)
.....++.... .+.++++|+|++.+++... .+.. .+.++... +...+..
T Consensus 70 ------------------~~~~~e~~~s~----~~aa~~GGvTtv~~~pn~~P~~~~~~~~~~~~~~~~~~~~vd~~~~~ 127 (418)
T PRK07369 70 ------------------GFEERETLASL----AAAAAAGGFTRVAILPDTFPPLDNPATLARLQQQAQQIPPVQLHFWG 127 (418)
T ss_pred ------------------CcCCCccHHHH----HHHHHhCCceEEEECCCCCCCCCCHHHHHHHHHHhcccCceeEEEEE
Confidence 11112232222 2678999999999986321 2222 12221111 1121111
Q ss_pred ccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCch
Q 015784 169 STMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 248 (400)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~ 248 (400)
.. ..+ .....+.+..++. .. +. ..+. ......+...+.++++.+++.|.++.+|+.+...
T Consensus 128 ~~-~~~----------~~~~~~~ei~~l~----~~--Gv-~~f~--~~~~~~~~~~l~~~~~~~~~~~~~v~~H~Ed~~l 187 (418)
T PRK07369 128 AL-TLG----------GQGKQLTELAELA----AA--GV-VGFT--DGQPLENLALLRRLLEYLKPLGKPVALWPCDRSL 187 (418)
T ss_pred EE-eeC----------CCCccHhhHHHHH----HC--CC-EEEE--CCCcCCCHHHHHHHHHHHHhcCCeEEEecCChhh
Confidence 11 110 0001122222221 11 22 2222 1222345668889999999999999999965443
Q ss_pred hhhHHh------hhcC-CCCC------hH-HHHhHhCCCCCCeeeEEecCCC-hhHHHHHHhcC--CeEEECcccccc--
Q 015784 249 ENQVVM------DTRK-VDHG------TV-TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAG--VKVSHCPASAMR-- 309 (400)
Q Consensus 249 ~~~~~~------~~~~-~~~~------~~-~~l~~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~--~~~~~~p~~~~~-- 309 (400)
....+. ...+ ..+- .+ +.+......+.+..+.|...-. -+.++.+++.| +.+.+||...+-
T Consensus 188 ~~~~~~~~g~~~~~~~~~~~p~~aE~~av~r~~~la~~~~~~~hi~HvSs~~~~~~i~~ak~~g~~vt~Ev~phhL~l~~ 267 (418)
T PRK07369 188 AGNGVMREGLLALRLGLPGDPASAETTALAALLELVAAIGTPVHLMRISTARSVELIAQAKARGLPITASTTWMHLLLDT 267 (418)
T ss_pred hhcCcccCChhHHHhCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEEeCCCHHHHHHHHHHHHcCCCeEEEecHHHHhccH
Confidence 110000 0000 0000 11 1222222334566666665522 23455556665 556788874220
Q ss_pred ---------------c---cCcccHHHHHHcCCcEEEcCCCCCCCCC---CCHH--------HHHHHHHHHhcccccccC
Q 015784 310 ---------------M---LGFAPIKEMLHADICVSLGTDGAPSNNR---MSIV--------DEMYLASLINKGREVFAN 360 (400)
Q Consensus 310 ---------------~---~~~~~~~~~~~~Gv~v~~gtD~~~~~~~---~~~~--------~~~~~~~~~~~~~~~~~~ 360 (400)
+ .....+.+.+..|....++|||.|.... .+++ -+..+...+...
T Consensus 268 ~~~~~~~~~~kv~PPLR~~~d~~aL~~~l~~G~Id~i~SDHaP~~~~~K~~~~~~~~~G~~G~e~~l~~~~~~~------ 341 (418)
T PRK07369 268 EALASYDPNLRLDPPLGNPSDRQALIEGVRTGVIDAIAIDHAPYTYEEKTVAFAEAPPGAIGLELALPLLWQNL------ 341 (418)
T ss_pred HHHhccCCCcEECCCCCCHHHHHHHHHHHhcCCCCEEEcCCCCCCHHHccCCHhHCCCCceeHHHHHHHHHHHH------
Confidence 0 0112345567789999999999876210 0111 111111111110
Q ss_pred CCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 361 GTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 361 ~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....+++++++++++|.|||++||+. .|+|++|++|
T Consensus 342 --v~~~~i~l~~~v~~~s~nPA~~lgl~--~G~i~~G~~A 377 (418)
T PRK07369 342 --VETGELSALQLWQALSTNPARCLGQE--PPSLAPGQPA 377 (418)
T ss_pred --HHcCCCCHHHHHHHHHHhHHHHhCCC--cCcccCCCcC
Confidence 11345999999999999999999996 3999999986
No 75
>PRK02382 dihydroorotase; Provisional
Probab=99.93 E-value=1.5e-23 Score=197.77 Aligned_cols=317 Identities=18% Similarity=0.188 Sum_probs=176.3
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
.+++|+|++|++.+ . +.+++|+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+....
T Consensus 2 ~dl~i~n~~v~~~~---~-~~~~~v~I~dg~I~~i~~~~~~-----~~~~~~id~~g~~v~PG~ID~H~H~~~~g----- 67 (443)
T PRK02382 2 RDALLKDGRVYYNN---S-LQPRDVRIDGGKITAVGKDLDG-----SSSEEVIDARGMLLLPGGIDVHVHFREPG----- 67 (443)
T ss_pred ceEEEECCEEEeCC---C-ceEEEEEEECCEEEEecCCCCC-----CCCCeEEECCCCEEcCCEeeeeeeccCCC-----
Confidence 47899999999732 2 3568999999999999864321 12468999999999999999999985410
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC-----HHHHHHHHHHcCCeEEEecccccC
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAVELLGLRACLVQSTMDC 173 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~ 173 (400)
....++.. .....++.+|||++.+++... .+..........-+........ .
T Consensus 68 ------------------~~~~e~~~----~~~~aa~~gGvTtv~~~~~t~p~~~~~~~~~~~~~~a~~~s~v~~~~~-~ 124 (443)
T PRK02382 68 ------------------YTHKETWY----TGSRSAAAGGVTTVVDQPNTDPPTVDGESFDEKAELAARKSIVDFGIN-G 124 (443)
T ss_pred ------------------CCchhhHH----HHHHHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhCcCceEEEEEE-e
Confidence 00111211 133668999999999985321 1122221222111111111111 0
Q ss_pred CCCCCcccccCCchHHHHHHHHHHHHhccCCCCCe-EEEeec-cccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhh
Q 015784 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRI-RIWFGI-RQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQ 251 (400)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~ 251 (400)
+ . .........+.+ .+...+ +++... ......+++.+.++++.+++.|+++.+|+.+......
T Consensus 125 ~---~--------~~~~~~l~~l~~----~gv~~~gkv~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~ 189 (443)
T PRK02382 125 G---V--------TGNWDPLESLWE----RGVFALGEIFMADSTGGMGIDEELFEEALAEAARLGVLATVHAEDEDLFDE 189 (443)
T ss_pred e---e--------ccchhhHHHHHh----cCccceeEEEEEecCCCcccCHHHHHHHHHHHHhcCCeEEEecCCHHHHHH
Confidence 0 0 001112222221 111112 333321 1223557788999999999999999999965432111
Q ss_pred HHhh--------hcCCCCC------hH-HHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccc--------
Q 015784 252 VVMD--------TRKVDHG------TV-TFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAM-------- 308 (400)
Q Consensus 252 ~~~~--------~~~~~~~------~~-~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~-------- 308 (400)
.... .+...+- .+ +.+......+.+..+.|... .+.++.+++..+.+.+||...+
T Consensus 190 ~~~~~~g~~~~~~~~~~~p~~~E~~av~~~~~la~~~g~~~hi~h~ss--~~~~~~i~~~~vt~ev~ph~L~l~~~~~~~ 267 (443)
T PRK02382 190 LAKLLKGDADADAWSAYRPAAAEAAAVERALEVASETGARIHIAHIST--PEGVDAARREGITCEVTPHHLFLSRRDWER 267 (443)
T ss_pred hhHhhcCCCCHhhCCCcCCHHHHHHHHHHHHHHHHHhCCCEEEEECCC--HHHHHHHHHCCcEEEEchhhhhcCHHHHhc
Confidence 1100 0000000 11 12222222333444444433 4556666666677888888421
Q ss_pred ---cccCcccH---------HHHHHcCCcEEEcCCCCCCCC------------CCCHHHHHHHHHHHhcccccccCCCCC
Q 015784 309 ---RMLGFAPI---------KEMLHADICVSLGTDGAPSNN------------RMSIVDEMYLASLINKGREVFANGTTD 364 (400)
Q Consensus 309 ---~~~~~~~~---------~~~~~~Gv~v~~gtD~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (400)
...-.+|+ .+.++.|...+++|||.|... +..-. +......+.. ..
T Consensus 268 ~~~~~k~~PPlr~~~d~~aL~~~l~~g~i~~i~sDh~P~~~~~K~~~~~~~~~G~~g~-e~~~~~~~~~---------~~ 337 (443)
T PRK02382 268 LGTFGKMNPPLRSEKRREALWERLNDGTIDVVASDHAPHTREEKDADIWDAPSGVPGV-ETMLPLLLAA---------VR 337 (443)
T ss_pred cCceEEEcCCCCChHHHHHHHHHHhCCCCCEEEcCCCCCCHHHhcCChhhCCCCcccH-HHHHHHHHHH---------HH
Confidence 00011233 334667999999999987521 11001 1111111110 12
Q ss_pred CCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 365 PAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 365 ~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
..+++++++++++|.|||+++|+++ .|+|++|+.|
T Consensus 338 ~~~~~l~~~~~~~t~~pA~~~g~~~-~G~l~~G~~A 372 (443)
T PRK02382 338 KNRLPLERVRDVTAANPARIFGLDG-KGRIAEGYDA 372 (443)
T ss_pred cCCCCHHHHHHHHhHHHHHHcCCCC-CCccCCCCcC
Confidence 3459999999999999999999974 6999999987
No 76
>TIGR00221 nagA N-acetylglucosamine-6-phosphate deacetylase.
Probab=99.93 E-value=4.3e-24 Score=194.88 Aligned_cols=325 Identities=18% Similarity=0.226 Sum_probs=190.2
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
++++|+|++|++++ ....+++|+|+||+|++|++..+.+ ...++||++|++|+|||||+|+|...
T Consensus 3 ~~~~i~n~~i~~~~---~~~~~~~i~V~dGkI~~I~~~~~~~-----~~~~viD~~G~~i~PGfID~HvHg~~------- 67 (380)
T TIGR00221 3 ESYLLKDIAIVTGN---EVIDNGAVGINDGKISTVSTEAELE-----PEIKEIDLPGNVLTPGFIDIHIHGCG------- 67 (380)
T ss_pred ceEEEEeeEEECCC---CEEeccEEEEECCEEEEEcccccCC-----CCCeEEECCCCEEccceeeeeecccc-------
Confidence 35899999999853 3556789999999999998754321 24589999999999999999999854
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC-HHH---HHHHHHH-c-CCeEEEeccccc
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-VSE---MAKAVEL-L-GLRACLVQSTMD 172 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~-~~~---~~~~~~~-~-g~~~~~~~~~~~ 172 (400)
+.++ ...+.++. ...++.+++.|||++.++.... .+. ..+...+ . ......-.+++-
T Consensus 68 -g~~~------------~~~~~e~~----~~~~~~~~~~GvTt~l~t~~t~~~~~~~~~l~~~~~~~~~~~~a~~lG~Hl 130 (380)
T TIGR00221 68 -GVDT------------NDASFETL----EIMSERLPKSGCTSFLPTLITQPDENIKQAVKNMREYLAKEKNAQALGLHL 130 (380)
T ss_pred -CcCC------------CCCCHHHH----HHHHHHHHhcCeeEEeeeccCCCHHHHHHHHHHHHHHHhccCCceeeeEee
Confidence 1110 01122222 2234678899999999864222 221 1222211 1 111222355677
Q ss_pred CCCCCCcccccCCchHHHH-HHHHHHHHhccCCCCCeEEEe-eccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhh
Q 015784 173 CGEGLPASWAVRTTDDCIQ-SQKELYAKHHHAADGRIRIWF-GIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (400)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (400)
+|+++++.+.+.++.+.+. ...+.++++.....+.++.+. .|. .. --.++++.+.++|+.+.+-......
T Consensus 131 EGPfi~~~~~Gah~~~~i~~p~~~~~~~~~~~~~~~i~~vTlAPE--~~----~~~~~i~~l~~~gi~vs~GHs~A~~-- 202 (380)
T TIGR00221 131 EGPFLSPEKKGAHPPEYIREPDVELFKKFLCEAGGVITKVTLAPE--ED----QHFELIRHLKDAGIIVSAGHTNATY-- 202 (380)
T ss_pred ecCcCChhhcCCCCHHHhhCcCHHHHHHHHHhcCCCEEEEEECCC--CC----ChHHHHHHHHHCCeEEEeeCCCCCH--
Confidence 8888999888888887766 444556666655556677542 221 11 1346667778888887643322222
Q ss_pred hHHhhhcC------------------CCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhc-CC-eEE-ECcc-ccc
Q 015784 251 QVVMDTRK------------------VDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRA-GV-KVS-HCPA-SAM 308 (400)
Q Consensus 251 ~~~~~~~~------------------~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~-~~-~~~-~~p~-~~~ 308 (400)
+...+.+. +..+.+.......-+ .--+|..+.|+.++.++.+.+. |. ++. ++-. ...
T Consensus 203 ~~~~~a~~~Ga~~~THlfNaM~~~~hR~pg~vga~l~~~~~-~~elI~Dg~Hv~p~~~~~~~r~kg~~~~~lvtDa~~~~ 281 (380)
T TIGR00221 203 ELAKAAFKAGATHATHLYNAMSPIHHREPGVIGAVLDHDDV-YTEIIADGIHIHPLNIRLAKKLKGDSKLCLVTDSMAAA 281 (380)
T ss_pred HHHHHHHHcCCCeeeeeccCCCCcCCCCCcHHHHHhcCCCc-EEEEEcCCCcCCHHHHHHHHHhcCCCcEEEEecccccc
Confidence 22222111 111222211111100 0135677889999998888665 32 222 2111 111
Q ss_pred cc-cCcccHHH---HHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHH
Q 015784 309 RM-LGFAPIKE---MLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKS 384 (400)
Q Consensus 309 ~~-~~~~~~~~---~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~ 384 (400)
-+ .+.+.+.. ..+.|. +.-.|..-.++..++.++++..... .+++++++++++|.|||++
T Consensus 282 g~~~G~y~l~~~~v~~~~g~--~~~~~g~LAGs~ltl~~~v~~l~~~--------------~~~~~~eal~~aT~npA~~ 345 (380)
T TIGR00221 282 GAKDGVFIFGGKTVYIREGT--CLDSNGTLAGSSLTMIEGARNLVEF--------------TNISLTDAARMSSLNPARA 345 (380)
T ss_pred CCCCceEeECCEEEEEECCE--EEcCCCceechhhhHHHHHHHHHHh--------------hCCCHHHHHHHHhHHHHHH
Confidence 11 22222110 112221 1113433333557788888876533 2489999999999999999
Q ss_pred cCCCCCccccccCcCC
Q 015784 385 VLWDNDIGSLEAGKKV 400 (400)
Q Consensus 385 lg~~~~~G~i~~G~~A 400 (400)
+|+++++|+|++|+.|
T Consensus 346 lgl~~~~G~i~~G~~A 361 (380)
T TIGR00221 346 LGIDDRLGSVTVGKDA 361 (380)
T ss_pred hCCCCCCcccCCCCcC
Confidence 9998778999999987
No 77
>cd01307 Met_dep_hydrolase_B Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.93 E-value=6.2e-24 Score=193.73 Aligned_cols=288 Identities=17% Similarity=0.167 Sum_probs=168.3
Q ss_pred eEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChh
Q 015784 42 GVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEE 121 (400)
Q Consensus 42 ~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (400)
+|+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+...... .. +
T Consensus 1 ~i~i~~g~I~~i~~~~~~-----~~~~~~id~~g~~v~PG~iD~H~H~~~~g~~--------------------~~---~ 52 (338)
T cd01307 1 DVAIENGKIAAVGAALAA-----PAATQIVDAGGCYVSPGWIDLHVHVYQGGTR--------------------YG---D 52 (338)
T ss_pred CEEEECCEEEEccCCCCC-----CCCCeEEECCCCEEecCeEEeeecCCCCCcc--------------------cC---C
Confidence 489999999999985321 1246899999999999999999999652110 00 0
Q ss_pred hHHHHHHHHHHHHHhcCcceeeccCcC---CHHHHHHHH-HHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHH
Q 015784 122 DSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAV-ELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELY 197 (400)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTt~~~~~~~---~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (400)
. ..+.++++|+||+.+++.. ......+.. ...+.+......+...+...+..+ ........+...+.+
T Consensus 53 ~-------~~~~a~~~GvTtvvd~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~ 124 (338)
T cd01307 53 R-------PDMIGVKSGVTTVVDAGSAGADNIDGFRYTVIERSATRVYAFLNISRVGLVAQDEL-PDPDNIDEDAVVAAA 124 (338)
T ss_pred C-------HhHHHHcCceeEEEeCCCCCCCCHHHHHHHHHHhhhceEEEEEeeecccccccccc-CChhHCCHHHHHHHH
Confidence 0 2245889999999997632 233322222 344443222111111121111111 111111122333333
Q ss_pred HHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCe
Q 015784 198 AKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNL 277 (400)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 277 (400)
.+....- ..++..+..+.........++..++.+++.|+++.+|+.+.......+. ... ....
T Consensus 125 ~e~~~gi-~gik~~~~~~~~~~~~~~~l~~~~~~a~~~~~pi~vH~~~~~~~~~~~~-------------~~l---~~g~ 187 (338)
T cd01307 125 REYPDVI-VGLKARASKSVVGEWGIKPLELAKKIAKEADLPLMVHIGSPPPILDEVV-------------PLL---RRGD 187 (338)
T ss_pred HHCcCcE-EEEEEEeecccccccCCcHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHH-------------HHh---cCCC
Confidence 2222211 1244444333322223334888999999999999999987765433222 211 2224
Q ss_pred eeEEecCCCh-----------hHHHHHHhcCCeEEECccccccccCcccHHHHHHcCC-cEEEcCCCCCCC----CCCCH
Q 015784 278 LSAHTVWVNH-----------TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADI-CVSLGTDGAPSN----NRMSI 341 (400)
Q Consensus 278 ~~~h~~~~~~-----------~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~Gv-~v~~gtD~~~~~----~~~~~ 341 (400)
.+.|+...+. +.++.+.+.|+.+.+..... .....+.++++++|+ +..++||.+..+ +...+
T Consensus 188 ~~~H~~~g~~~~~~~~~~~~~~~~~~~~~~G~~~d~~~G~~--~~~~~~~~~l~~~G~~~~~lstD~~~~~~~~~p~~~l 265 (338)
T cd01307 188 VLTHCFNGKPNGIVDEEGEVLPLVRRARERGVIFDVGHGTA--SFSFRVARAAIAAGLLPDTISSDIHGRNRTNGPVYAL 265 (338)
T ss_pred EEEeccCCCCCCCCCCCCcHHHHHHHHHhCCEEEEeCCCCC--chhHHHHHHHHHCCCCCeeecCCccccCCCCCccccH
Confidence 5778887543 56788888898876542110 011234677889996 678999985321 11222
Q ss_pred HHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 342 VDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
...++... ..+++++++++++|.|||++||+. ++|+|++|+.|
T Consensus 266 ~~~l~~l~---------------~~gi~~ee~~~~~T~NpA~~lgl~-~~G~l~~G~~a 308 (338)
T cd01307 266 ATTLSKLL---------------ALGMPLEEVIEAVTANPARMLGLA-EIGTLAVGYDA 308 (338)
T ss_pred HHHHHHHH---------------HcCCCHHHHHHHHHHHHHHHcCCC-CCCccCCCCcC
Confidence 23333321 235999999999999999999994 58999999986
No 78
>cd01308 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid. Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides.
Probab=99.93 E-value=2.6e-23 Score=193.70 Aligned_cols=311 Identities=19% Similarity=0.232 Sum_probs=176.7
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|++++. ..+++|+|+||+|++|++..+.+. ..+.++||++|++|+|||||+|+|+......
T Consensus 2 ~~i~~~~v~~~~~----~~~~~v~i~~g~I~~v~~~~~~~~---~~~~~~id~~g~~v~PG~id~H~H~~~~~~~----- 69 (387)
T cd01308 2 TLIKNAEVYAPEY----LGKKDILIAGGKILAIEDQLNLPG---YENVTVVDLHGKILVPGFIDQHVHIIGGGGE----- 69 (387)
T ss_pred EEEECcEEeCCCC----ccceEEEEECCEEEEEeCCccccc---CCCCeEEECCCCEEccCeeehhhCcccccCC-----
Confidence 5899999998542 367899999999999998653221 1246899999999999999999999641000
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc-----CCHH---HHHHHHHHcCCeEEEeccccc
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QHVS---EMAKAVELLGLRACLVQSTMD 172 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~-----~~~~---~~~~~~~~~g~~~~~~~~~~~ 172 (400)
... ...+.+ ..+.+++++|+||+.++.. ...+ ...+.+.+.|++.+.....+.
T Consensus 70 ~~~------------~~~~~~-------~~~~~~~~~G~tt~~d~~~~~~~~~~~~~~~~~~~~~~~~Gv~~v~~~~~~~ 130 (387)
T cd01308 70 GGP------------STRTPE-------VTLSDLTTAGVTTVVGCLGTDGISRSMEDLLAKARALEEEGITCFVYTGSYE 130 (387)
T ss_pred Ccc------------cccCHH-------HHHHHHHhCCceEEecCcCCCCCCCCHHHHHHHHHHHHHhCCEEEEEecccC
Confidence 000 001111 1234678999999999762 1223 345566778999987655433
Q ss_pred CCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCC------eeeEecCCC
Q 015784 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT------GIHMHVAEI 246 (400)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~------~v~~H~~~~ 246 (400)
. +.. .....+......++.+.. .+ ..............+.+.++++.++..+. .+++|..+.
T Consensus 131 ~----~~~----~~~~~~~~~~~~i~~~~~--~g--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vh~~~~ 198 (387)
T cd01308 131 V----PTR----TITGSIRKDLLLIDKVIG--VG--EIAISDHRSSQPTVEELARIAAEARVGGLLGGKAGIVHIHLGDG 198 (387)
T ss_pred C----CCc----CchhhHHHHHHHHHHhcC--cc--eEEEcCCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCc
Confidence 2 111 111222222233444332 11 11112222234556667777777765443 477777655
Q ss_pred chhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhH---HHHHHhcCCeEEECccccc-cc-----cCcccHH
Q 015784 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE---IGLLSRAGVKVSHCPASAM-RM-----LGFAPIK 317 (400)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~---i~~~~~~~~~~~~~p~~~~-~~-----~~~~~~~ 317 (400)
....+. ..+.+...|..-......|.. .+.++ .....+.|..+.+.-.... .+ .....++
T Consensus 199 ~~~~~~----------i~~~~~~~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~G~~v~i~~~~~~~~~~~~~~~~~~~l~ 267 (387)
T cd01308 199 KRALSP----------IFELIEETEIPITQFLPTHIN-RTAPLFEQGVEFAKMGGTIDLTSSIDPQFRKEGEVRPSEALK 267 (387)
T ss_pred hHHHHH----------HHHHHHhcCCCcceeECCccc-CCHHHHHHHHHHHHcCCcEEEECCCCccccccCccChHHHHH
Confidence 332221 223444444421123333333 34442 3334455664333322111 11 1234567
Q ss_pred HHHHcCC---cEEEcCCCCCC---CC------------CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhH
Q 015784 318 EMLHADI---CVSLGTDGAPS---NN------------RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATI 379 (400)
Q Consensus 318 ~~~~~Gv---~v~~gtD~~~~---~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~ 379 (400)
.++++|+ +++++||+... .. ...++..+.... ...+++++++++++|.
T Consensus 268 ~~~~~g~~~d~i~l~TD~~~~~p~~~~~g~~~~~g~~~~~~~~~~~~~~v--------------~~~~i~~~~al~~~T~ 333 (387)
T cd01308 268 RLLEQGVPLERITFSSDGNGSLPKFDENGNLVGLGVGSVDTLLREVREAV--------------KCGDIPLEVALRVITS 333 (387)
T ss_pred HHHHhCCCCCcEEEEECCCCCcccCccCCeEEecCcCcHHHHHHHHHHHH--------------HhCCCCHHHHHHHHHH
Confidence 8888986 37999997311 00 001222233221 1234999999999999
Q ss_pred HHHHHcCCCCCccccccCcCC
Q 015784 380 NGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 380 ~~A~~lg~~~~~G~i~~G~~A 400 (400)
|||+++|+++ +|+|++|++|
T Consensus 334 npA~~lg~~~-~G~i~~G~~A 353 (387)
T cd01308 334 NVARILKLRK-KGEIQPGFDA 353 (387)
T ss_pred HHHHHhCCCC-CCCcCCCCcC
Confidence 9999999976 6999999987
No 79
>COG3964 Predicted amidohydrolase [General function prediction only]
Probab=99.93 E-value=7.9e-24 Score=176.18 Aligned_cols=304 Identities=16% Similarity=0.182 Sum_probs=177.2
Q ss_pred cccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccc
Q 015784 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (400)
Q Consensus 18 ~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~ 97 (400)
+.+++++|++++++... +-+..+|.|.||||+++++ .++ +..+++||++|.+|.|||||.|+|.+.....
T Consensus 3 qfdiLLt~~rlidpa~g--~d~~tniai~ngkIaa~~d-~~a-----pa~tq~Ida~Gc~VspG~iDlHvHvy~ggt~-- 72 (386)
T COG3964 3 QFDILLTGGRLIDPARG--IDEITNIAIINGKIAAADD-YPA-----PAETQIIDADGCIVSPGLIDLHVHVYYGGTE-- 72 (386)
T ss_pred ccceeeeCCeecccccc--cCccceeeeecCeEEeccC-cCC-----ChhheEEccCccEeccCeeeeeeEEecCCCc--
Confidence 45899999999976543 3355589999999999994 332 2357999999999999999999999762211
Q ss_pred cCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC---HHHHHHHHHH---cCCeEEEecccc
Q 015784 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVEL---LGLRACLVQSTM 171 (400)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~---~~~~~~~~~~---~g~~~~~~~~~~ 171 (400)
....++ .-....||||+.|.|... .....+.... ..+..++..+
T Consensus 73 ------------------~~v~pd----------~~ga~~GvTTvVDAGSaGaanf~gF~r~vie~Sr~RI~Aflnvs-- 122 (386)
T COG3964 73 ------------------GGVRPD----------MYGAPNGVTTVVDAGSAGAANFDGFYRTVIEASRVRIKAFLNVS-- 122 (386)
T ss_pred ------------------cCcCHH----------HccccCCceEEEecCCcCccchhhHHHHhhcchhheeeeeeecc--
Confidence 111111 125567999999986432 2222221111 1122222111
Q ss_pred cCCC-CCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeec--cccccCCHHHHHHHHHHHHHcCCeeeEecCCCch
Q 015784 172 DCGE-GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGI--RQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 248 (400)
Q Consensus 172 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~ 248 (400)
..|- ++++-+.. ..-......+.++++...-. .+|.-... -+.+..+| +....++|++.++|+++|..+.+.
T Consensus 123 ~~Gl~a~nE~~d~--~nid~d~i~aa~reh~d~iv-GlKvR~s~~~~g~~GitP--l~la~~ia~~~klPlmvHigePp~ 197 (386)
T COG3964 123 PPGLTASNELYDP--DNIDEDKIHAAFREHRDVIV-GLKVRVSTEDIGEYGITP--LTLALRIANDLKLPLMVHIGEPPV 197 (386)
T ss_pred CcceeeehhhCCh--hhCCHHHHHHHHHhCcCcEE-EEEEEeeeccccccCCch--HHHHHHHHhhcCCceEEecCCCCc
Confidence 1110 01110100 00011123333333322111 12222222 23344554 677778889999999999998665
Q ss_pred hhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC-------h----hHHHHHHhcCCeEEECccccccccCcccHH
Q 015784 249 ENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN-------H----TEIGLLSRAGVKVSHCPASAMRMLGFAPIK 317 (400)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~-------~----~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~ 317 (400)
..+.+.+... ..-++.||.+-- + .++++..+.|+......-.. .-...-.+
T Consensus 198 ~~dEvlerL~----------------~GDIitHcfngkpn~~l~~dg~vr~~vrra~erGV~fD~ghG~a--sfsf~vAr 259 (386)
T COG3964 198 LMDEVLERLR----------------RGDIITHCFNGKPNTILTDDGVVRAEVRRARERGVIFDAGHGRA--SFSFNVAR 259 (386)
T ss_pred cHHHHHHhcc----------------CCceeeeeccCCCCCccccchhHHHHHHHHHhcceEEEccCCcc--eeeHHHHH
Confidence 4343332222 235678887632 1 34567777788765432211 01223468
Q ss_pred HHHHcC-CcEEEcCCCCCC----CCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCcc
Q 015784 318 EMLHAD-ICVSLGTDGAPS----NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIG 392 (400)
Q Consensus 318 ~~~~~G-v~v~~gtD~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G 392 (400)
+++.+| .+..|+||-... .+-+++..-|.... .-+++..+++.++|.|||..+++.+ +|
T Consensus 260 ~aia~GllP~~ISSDlh~~~~~n~Pv~dla~~mSKll---------------algmpl~~Vi~avT~npA~~i~l~~-~g 323 (386)
T COG3964 260 RAIANGLLPDIISSDLHTITKLNGPVYDLAWIMSKLL---------------ALGMPLTDVINAVTHNPAVLIGLAE-IG 323 (386)
T ss_pred HHHhcCCCcceeeccceeeeecCchHHHHHHHHHHHH---------------HcCCcHHHHHHHHhcCHHHHhCccc-cC
Confidence 899999 589999995321 11222223333322 3359999999999999999999985 79
Q ss_pred ccccCcCC
Q 015784 393 SLEAGKKV 400 (400)
Q Consensus 393 ~i~~G~~A 400 (400)
+|+||.+|
T Consensus 324 tLa~G~~a 331 (386)
T COG3964 324 TLAPGAFA 331 (386)
T ss_pred ccCCCccc
Confidence 99999876
No 80
>COG0044 PyrC Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism]
Probab=99.92 E-value=3.8e-23 Score=190.17 Aligned_cols=314 Identities=17% Similarity=0.198 Sum_probs=179.0
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+++|+|+++++.+ ....++|+|+||+|++|++.... + .+.++||++|++|+|||||.|+|+..
T Consensus 2 ~~lIk~~~iv~~~----~~~~~di~i~~g~I~~Ig~~l~~----~-~~~~iiD~~g~~v~PG~ID~HVH~re-------- 64 (430)
T COG0044 2 DLLIKNARVVDPG----EDEVADILIKDGKIAAIGKNLEP----T-SGAEIIDAKGLLVLPGLVDLHVHFRE-------- 64 (430)
T ss_pred cEEEeccEEEcCC----CceEecEEEECCEEEEeccCCCC----C-CCCcEEECCCCEEccCeeEEEEecCC--------
Confidence 5799999999752 23567999999999999986432 1 36799999999999999999999965
Q ss_pred CCChhHhhhhccccccCCCCh-hhHHHHHHHHHHHHHhcCcceeeccCcCC-----HHHH---HHHHHHcC-CeEEEecc
Q 015784 100 DVDLMTWLHDRIWPYESNMTE-EDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEM---AKAVELLG-LRACLVQS 169 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~GvTt~~~~~~~~-----~~~~---~~~~~~~g-~~~~~~~~ 169 (400)
..+.. +++.. +.+.++++|+|++.+|.... .+.. .+.++... +......
T Consensus 65 ----------------pg~~~ke~~~t----gs~AAa~GG~Ttv~dmPnt~P~~~~~~~~~~~~~~a~~~~~vd~~~~~- 123 (430)
T COG0044 65 ----------------PGFEHKETFET----GSRAAAAGGVTTVVDMPNTKPPIDTAEALEDKLERAKGKSVVDYAFYG- 123 (430)
T ss_pred ----------------CCcchhhhHHH----HHHHHHcCCceEEEECCCCCCCCCCHHHHHHHHHHhhccceeEEEEEE-
Confidence 22222 22222 34779999999999986432 2222 22222111 1111111
Q ss_pred cccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchh
Q 015784 170 TMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (400)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~ 249 (400)
....+ .. ...+..+... ...++.++.. .....+.+.+++.++.+.+.|..+.+|+.+....
T Consensus 124 ~it~~------------~~---~~~~~~~~~~---~~g~~~F~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~H~Ed~~~~ 184 (430)
T COG0044 124 GLTKG------------NL---GKLELTERGV---EAGFKGFMDD-STGALDDDVLEEALEYAAELGALILVHAEDDDLI 184 (430)
T ss_pred EEecc------------cc---chhhhhhhhh---ccceEEEecC-CcCcCCHHHHHHHHHHHHhcCCeEEEecCChhHh
Confidence 11110 00 0011111111 1223333322 2245677899999999999999999999665321
Q ss_pred hhHHhh-------hcCCCCCh------H-HHHhHhCCCCCCeeeEEecCCC-hhHHHHHHhcCCe--EEECccccc----
Q 015784 250 NQVVMD-------TRKVDHGT------V-TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAGVK--VSHCPASAM---- 308 (400)
Q Consensus 250 ~~~~~~-------~~~~~~~~------~-~~l~~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~~~--~~~~p~~~~---- 308 (400)
...+.. .+-.++-. + +.+.-....+.+..+.|..... -+.++..+..|+. +.+||..-+
T Consensus 185 ~~~~~~~g~~~~~~~~~~~p~~aE~~~iar~~~la~~~g~~vhi~HiSt~~sv~li~~ak~~g~~vt~EvtphHL~l~~~ 264 (430)
T COG0044 185 AEGVMNEGLRAPELGLAGRPPIAEASAIARDLELARATGARVHICHISTKESVELIRAAKAEGIRVTAEVTPHHLLLDEE 264 (430)
T ss_pred hhHHHhcCccchhhccCCCChHHHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHHHHHHhhcCCceEEeecchheEccHh
Confidence 111110 00011111 1 1111122223344444444321 2335555555544 566776421
Q ss_pred ---c----------c---cCcccHHHHHHcCCcEEEcCCCCCCCCCCC-----------HHHHHHHHHHHhcccccccCC
Q 015784 309 ---R----------M---LGFAPIKEMLHADICVSLGTDGAPSNNRMS-----------IVDEMYLASLINKGREVFANG 361 (400)
Q Consensus 309 ---~----------~---~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 361 (400)
. + ..+..+.+.++.|....+.|||.|...... .--|..+...+.
T Consensus 265 ~~~~~~~~~k~nPPLR~~~dr~aL~~~l~~G~ID~iasDHaPht~eeK~~~f~~ap~G~~glE~~lpl~l~--------- 335 (430)
T COG0044 265 DIEDLGTLAKVNPPLRDEEDREALWEALKDGVIDVIASDHAPHTLEEKRLPFEEAPSGIPGLETALPLLLT--------- 335 (430)
T ss_pred HhhccCcceEECCCCCCHHHHHHHHHHHhCCCCcEEEcCCCCCCHHHhccchhhCCCCCccHHHHHHHHHH---------
Confidence 0 0 111234566788999999999986521000 001111111111
Q ss_pred CCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 362 TTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 362 ~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.+....+|+++++++.|.|||++||+.. .|.|++|++|
T Consensus 336 lv~~g~lsl~~~v~~~S~nPA~ifgl~~-~g~i~~G~~A 373 (430)
T COG0044 336 LVKKGRLSLERLVELLSTNPARIFGLPP-KGAIEEGADA 373 (430)
T ss_pred HHHcCCcCHHHHHHHHhhCHHHHhCCCC-CCcccCCCcc
Confidence 0124559999999999999999999987 5889999987
No 81
>COG1001 AdeC Adenine deaminase [Nucleotide transport and metabolism]
Probab=99.92 E-value=1.3e-23 Score=192.34 Aligned_cols=300 Identities=18% Similarity=0.236 Sum_probs=190.6
Q ss_pred CCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEe-cCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccc
Q 015784 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAI-GQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA 94 (400)
Q Consensus 16 ~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~v-g~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~ 94 (400)
....+++++|+++++.-. .-+-.++|+|.+|+|+.| ++.. .++.++||+.|++|.|||||.|+|+..
T Consensus 21 ~~~adlv~~ng~ivdv~~--gei~~~dIaI~~grI~~v~~~~~-------~e~~~~iDa~g~yivPGfID~H~HIES--- 88 (584)
T COG1001 21 RAKADLVLKNGRIVDVVT--GEIYKGDIAIAGGRIVGVIGEYR-------AEATEVIDAAGRYIVPGFIDAHLHIES--- 88 (584)
T ss_pred CCCCCEEEECCEEEEeee--ccEEeeeEEEECCEEEEeecCcC-------cccceeecCCCCEeccceeecceeccc---
Confidence 456789999999997653 234567999999999995 4432 236799999999999999999999954
Q ss_pred ccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeec--------cCcCCHHHHHHHHHHcCCeEEE
Q 015784 95 KGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAE--------AGGQHVSEMAKAVELLGLRACL 166 (400)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~--------~~~~~~~~~~~~~~~~g~~~~~ 166 (400)
..+++.+ |. +..+.+|+||+.. +|...+..+.+.++..+++.+.
T Consensus 89 ---------------------Sm~tP~~-FA------~~Vlp~GtTtvV~DPHEIaNV~G~~Gi~~ml~~a~~~pl~~~~ 140 (584)
T COG1001 89 ---------------------SMLTPSE-FA------RAVLPHGTTTVVSDPHEIANVLGEDGIRFMLDEAKETPLKVYV 140 (584)
T ss_pred ---------------------cccCHHH-HH------HHhhccCceEEeeCcHHHHhhccHHHHHHHHHHHhhCCeEEEE
Confidence 3344443 22 3488899999984 2444567788999998888766
Q ss_pred e-cccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCC
Q 015784 167 V-QSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE 245 (400)
Q Consensus 167 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~ 245 (400)
. +++....+ .......-..+...+++. +..- -.+.-++...+...-+++.+. .++.+++.|.+|.-|+..
T Consensus 141 ~~pScVPat~-----~Et~Ga~l~a~~i~e~~~-~p~V--igl~E~Mn~pgVi~~D~~~l~-kl~a~~~~~k~VdGHapg 211 (584)
T COG1001 141 MLPSCVPATP-----FETSGAELTAEDIKELLE-HPEV--IGLGEMMNFPGVIEGDPDMLA-KLEAARKAGKPVDGHAPG 211 (584)
T ss_pred ecccCccCCc-----cccCCceecHHHHHHHhh-CCCc--cchhhhcCCchhccCCHHHHH-HHHHHHHcCCeecccCCC
Confidence 4 44443321 111111111222223221 1111 111112444455555665554 456789999999999976
Q ss_pred CchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccccCcccHHHHHHcC-C
Q 015784 246 IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHAD-I 324 (400)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G-v 324 (400)
-... .+..+...|+. ..|... +.|+..+-.+.|+.+.+.--|..+. -...++.+-+.| -
T Consensus 212 l~g~-------------~Ln~Y~aaGi~-----tDHE~~-t~EEa~~klr~Gm~i~iReGS~a~d-l~~l~~~i~e~~~~ 271 (584)
T COG1001 212 LSGK-------------ELNAYIAAGIS-----TDHEST-TAEEALEKLRLGMKIMIREGSAAKD-LAALLPAITELGSR 271 (584)
T ss_pred CChH-------------HHHHHHhcCCC-----cCcccC-CHHHHHHHHhCCcEEEEEcCchhhh-HHHHHHHHhhcCCc
Confidence 5431 33344445543 357766 5555444447899877653333221 011234444556 4
Q ss_pred cEEEcCCCCCCCC---CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 325 CVSLGTDGAPSNN---RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 325 ~v~~gtD~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++.++||...+.. ...+-+-+|.+. +.|++|.+|++|+|+|||+.+|+++ +|.|+||+.|
T Consensus 272 ~~~lcTDD~~p~dl~~eGhld~~vR~Ai---------------~~Gv~p~~a~qmAtiN~A~~~gl~~-~G~iAPG~~A 334 (584)
T COG1001 272 RVMLCTDDRHPDDLLEEGHLDRLVRRAI---------------EEGVDPLDAYQMATINPAEHYGLDD-LGLIAPGRRA 334 (584)
T ss_pred eEEEECCCCChhHhhhcCCHHHHHHHHH---------------HcCCCHHHHHHHHhcCHHHHcCCcc-cccccCCccc
Confidence 7899999764421 122333445544 4569999999999999999999987 8999999987
No 82
>PRK11170 nagA N-acetylglucosamine-6-phosphate deacetylase; Provisional
Probab=99.92 E-value=2e-23 Score=191.05 Aligned_cols=326 Identities=17% Similarity=0.140 Sum_probs=186.7
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|++++ ..+++++|+|+||+|++|++..+. + .+.++||++|++|+|||||+|+|... +
T Consensus 2 ~~i~n~~i~~~~---~~~~~~~v~IedgkI~~I~~~~~~----~-~~~~~ID~~G~~l~PG~ID~HvHG~~--------g 65 (382)
T PRK11170 2 YALTNGRIYTGH---EVLDDHAVVIADGLIEAVCPVAEL----P-PGIEQRDLNGAILSPGFIDLQLNGCG--------G 65 (382)
T ss_pred EEEEeeEEECCC---CeEeCCEEEEECCEEEEecCCccC----C-CCCeEEeCCCCEEccceeeeeecCcc--------C
Confidence 679999999754 466788999999999999875432 1 24589999999999999999999854 1
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC-CHHH---HHHHHHH-cCCeEEEecccccCCC
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSE---MAKAVEL-LGLRACLVQSTMDCGE 175 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-~~~~---~~~~~~~-~g~~~~~~~~~~~~~~ 175 (400)
.++.+ + ....+.+. .....+.+++.|||++.+.... ..+. ..+...+ ..-....-.+++-+|+
T Consensus 66 ~~~~~-------~-~~~~~~~~----l~~~~~~~~~~GvTt~lpT~it~~~~~~~~~l~~~~~~~~~~~a~~~G~HlEGP 133 (382)
T PRK11170 66 VQFND-------T-AEAISVET----LEIMQKANEKSGCTSFLPTLITSSDELMKQAVRVMREYLAKHPNQALGLHLEGP 133 (382)
T ss_pred ccccc-------C-ccCCCHHH----HHHHHHHHHhcCEeEEeeeccCCCHHHHHHHHHHHHHHHhcCCCeEEEEEeecC
Confidence 11100 0 00111111 1223355799999999986422 2222 1222211 1111122355667888
Q ss_pred CCCcccccCCchHHHH-HHHHHHHHhccCCCCCeEEE-eeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHH
Q 015784 176 GLPASWAVRTTDDCIQ-SQKELYAKHHHAADGRIRIW-FGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV 253 (400)
Q Consensus 176 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~ 253 (400)
++++.+.+.+..+.+. ...+.++.+.... +.++++ +.|. ... . ++++.+.+.|+.+.+.......+ ..
T Consensus 134 fi~~~~~Gah~~~~~~~p~~~~~~~~~~~~-~~i~~iTlAPE---~~~---~-~~i~~l~~~gi~vs~GHs~A~~~--~~ 203 (382)
T PRK11170 134 YLNLVKKGTHNPEFIRKPDAEMVDFLCENA-DVITKVTLAPE---MVD---A-EVIRKLVEAGIVVSAGHSNATYE--EA 203 (382)
T ss_pred CCCcccCCCCCHHHhcCcCHHHHHHHHhcc-CCEEEEEECCC---CCc---H-HHHHHHHHCCcEEEeeCCcCCHH--HH
Confidence 8898888888877755 3345556665543 355543 2332 111 2 66777888888876554433322 22
Q ss_pred hhhcCCCCChHHHH---------hHhCCCC-----CC---eeeEEecCCChhHHHHHHhcC-Ce--EEECccccccc-cC
Q 015784 254 MDTRKVDHGTVTFL---------DKIEFLQ-----NN---LLSAHTVWVNHTEIGLLSRAG-VK--VSHCPASAMRM-LG 312 (400)
Q Consensus 254 ~~~~~~~~~~~~~l---------~~~~~~~-----~~---~~~~h~~~~~~~~i~~~~~~~-~~--~~~~p~~~~~~-~~ 312 (400)
.+.+..+.+.+.++ +..|+.+ .+ -+|..+.|+.++.++.+.+.. -. .++--....-+ .+
T Consensus 204 ~~a~~~Ga~~~THlfNaM~~~~hR~pg~vga~l~~~~~~~elI~Dg~Hv~p~~~~~~~~~k~~~~~lvtDa~~~~G~~~g 283 (382)
T PRK11170 204 KAGFRAGITFATHLYNAMPYITGREPGLVGAILDEPDVYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATAPAGANIE 283 (382)
T ss_pred HHHHHcCCCEEeeccccCCcccCCCcchhhHhhcCCCcEEEEEcCcccCCHHHHHHHHHhcCCcEEEEeccccCCCCCCC
Confidence 22211111111111 0111111 11 356788899999988876653 22 22211111111 12
Q ss_pred cccHH---HHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 313 FAPIK---EMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 313 ~~~~~---~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
.+.+. -..+.|. +.-.|+.-.++..++.+.++.+... .+++++++++++|.|||+++|+++
T Consensus 284 ~y~l~~~~v~v~~g~--~~~~~G~LAGs~l~l~~~v~~l~~~--------------~~~~~~eal~~aT~npA~~lgl~~ 347 (382)
T PRK11170 284 QFIFAGKTIYYRDGL--CVDENGTLSGSALTMIEAVRNLVEH--------------VGIALDEALRMATLYPARAIGVDK 347 (382)
T ss_pred eEEECCEEEEEECCE--EECCCCcccccHhHHHHHHHHHHHh--------------cCCCHHHHHHHHHHHHHHHhCCCC
Confidence 21110 0112231 1113333333567788888876532 359999999999999999999987
Q ss_pred CccccccCcCC
Q 015784 390 DIGSLEAGKKV 400 (400)
Q Consensus 390 ~~G~i~~G~~A 400 (400)
++|+|++|+.|
T Consensus 348 ~~G~i~~G~~A 358 (382)
T PRK11170 348 RLGSIEAGKVA 358 (382)
T ss_pred CccccCCCCcC
Confidence 78999999987
No 83
>PRK08044 allantoinase; Provisional
Probab=99.92 E-value=1.4e-23 Score=197.40 Aligned_cols=320 Identities=15% Similarity=0.182 Sum_probs=175.0
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
++++|+|++|++.++ . ..++|+|+||+|++|++... .+.++||++|++|+|||||+|+|+....
T Consensus 3 ~~~~i~n~~vi~~~~---~-~~~~i~I~dg~I~~i~~~~~-------~~~~~iD~~G~~v~Pg~iD~h~h~~~~~----- 66 (449)
T PRK08044 3 FDLIIKNGTVILENE---A-RVVDIAVKGGKIAAIGQDLG-------DAKEVMDASGLVVSPGMVDAHTHISEPG----- 66 (449)
T ss_pred ceEEEECcEEEcCCC---C-EEEEEEEECCEEEEecCCCC-------CCCeEEECCCCEEcCCeeccccccCCCC-----
Confidence 478999999997432 2 34799999999999986431 2458999999999999999999985410
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc-C-----CHHHHHHHHHHcCCeEEEeccccc
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-Q-----HVSEMAKAVELLGLRACLVQSTMD 172 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~-~-----~~~~~~~~~~~~g~~~~~~~~~~~ 172 (400)
....++... ....++++|+|++.+++. . ..+......+...-+...-...+
T Consensus 67 ------------------~~~~e~~~~----~~~aa~~gGvTtv~d~~~~~~p~~~~~~~~~~~~~~~~~~s~vd~~~~- 123 (449)
T PRK08044 67 ------------------RSHWEGYET----GTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQL- 123 (449)
T ss_pred ------------------ccccccHHH----HHHHHHhCCceEEECCccCCCCCCCcHHHHHHHHHHhccCCeeeEEEE-
Confidence 001122221 336789999999999862 1 22222111121111110000000
Q ss_pred CCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccc-------cccCCHHHHHHHHHHHHHcCCeeeEecCC
Q 015784 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ-------IMNATDRLLLETRDMAREFKTGIHMHVAE 245 (400)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~e~l~~~~~~a~~~~~~v~~H~~~ 245 (400)
.+ +.. ....+...+. ..+.-.+++++.... ....++..+.+.++.+.+.|.++.+|+.+
T Consensus 124 ~~--~~~--------~~~~ei~~l~----~~gv~~fk~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~ 189 (449)
T PRK08044 124 GG--LVS--------YNLDRLHELD----EVGVVGFKCFVATCGDRGIDNDFRDVNDWQFYKGAQKLGELGQPVLVHCEN 189 (449)
T ss_pred ee--eCC--------CCHHHHHHHH----HcCceEEEEEecccCcccccCCccCcCHHHHHHHHHHHHhcCCEEEEecCC
Confidence 01 000 0122222221 111123443332211 12245667888889999999999999975
Q ss_pred CchhhhHH--hhhcC--------CCCC------hH-HHHhHhCCCCCCeeeEEecCC-ChhHHHHHHhcC--CeEEECcc
Q 015784 246 IPYENQVV--MDTRK--------VDHG------TV-TFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAG--VKVSHCPA 305 (400)
Q Consensus 246 ~~~~~~~~--~~~~~--------~~~~------~~-~~l~~~~~~~~~~~~~h~~~~-~~~~i~~~~~~~--~~~~~~p~ 305 (400)
........ ....+ ..+- .+ +.+......+.+..+.|.... .-+.++.+++.| +.+.+||.
T Consensus 190 ~~l~~~~~~~~~~~G~~~~~~~~~~~P~~~E~~~v~r~~~lA~~~g~~vhi~HiSt~~~~~~i~~ak~~G~~it~e~~~h 269 (449)
T PRK08044 190 ALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHISSPEGVEEVTRARQEGQDVTCESCPH 269 (449)
T ss_pred HHHHHHHHHHHHhcCCCChhhccccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCCEEEEcChh
Confidence 54311111 00001 0000 11 122222223334555565542 234556666666 44566776
Q ss_pred cccc----c----------------cCcccHHHHHHcCCcEEEcCCCCCCCCCC---CHHHH--------HHHHHHHhcc
Q 015784 306 SAMR----M----------------LGFAPIKEMLHADICVSLGTDGAPSNNRM---SIVDE--------MYLASLINKG 354 (400)
Q Consensus 306 ~~~~----~----------------~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~---~~~~~--------~~~~~~~~~~ 354 (400)
..+- + .....+.+.+..|...+++|||.|..... +++.. ..+...+...
T Consensus 270 ~L~l~~~~~~~~~~~~k~~PPlr~~~d~~aL~~~l~~G~id~i~sDH~P~~~~~K~~~~~~~~~g~~g~e~~l~~~~~~~ 349 (449)
T PRK08044 270 YFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMEAWGGIAGLQNCMDVMFDEA 349 (449)
T ss_pred hhcccHHHhhCCCCcEEEcCCCCChHHHHHHHHHHhCCCceEEEcCCCCCChHHccCChhhCCCCceEHHHHHHHHHHHH
Confidence 4220 0 11123444566899999999998752111 22211 1111111100
Q ss_pred cccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 355 REVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 355 ~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....+++++++++++|.|||++||+++ .|+|++|++|
T Consensus 350 --------v~~~~l~~~~~v~~~s~npA~~lgl~~-~G~i~~G~~A 386 (449)
T PRK08044 350 --------VQKRGMSLPMFGKLMATNAADIFGLQQ-KGRIAPGKDA 386 (449)
T ss_pred --------HHcCCCCHHHHHHHHHHhHHHHhCCCC-CCcCCCCCcc
Confidence 123459999999999999999999964 5999999987
No 84
>PF01979 Amidohydro_1: Amidohydrolase family; InterPro: IPR006680 This group of enzymes represents a large metal dependent hydrolase superfamily []. The family includes adenine deaminase (3.5.4.2 from EC) that hydrolyses adenine to form hypoxanthine and ammonia. The adenine deaminase reaction is important for adenine utilization as a purine and also as a nitrogen source []. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases (3.5.1.25 from EC). These enzymes catalyse the reaction: N-acetyl-D-glucosamine 6-phosphate + H2O = D-glucosamine 6-phosphate + acetateThis family includes dihydroorotase and urease which belong to MEROPS peptidase family M38 (beta-aspartyl dipeptidase, clan MJ), where they are classified as non-peptidase homologs. ; GO: 0016787 hydrolase activity; PDB: 1O12_A 2KAU_C 1FWD_C 1A5M_C 1FWC_C 1FWI_C 1EJV_C 1FWH_C 1A5L_C 1KRA_C ....
Probab=99.92 E-value=7.8e-25 Score=200.58 Aligned_cols=277 Identities=27% Similarity=0.369 Sum_probs=181.8
Q ss_pred EeeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC--CHH---
Q 015784 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--HVS--- 151 (400)
Q Consensus 77 ~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~--~~~--- 151 (400)
+|+|||||+|+|+.+....+. .+.++.+......+..++++|||++.+++.. ...
T Consensus 1 ~v~PGlID~H~H~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~ 60 (333)
T PF01979_consen 1 YVMPGLIDAHVHGGQGGLRGL--------------------LDPEDHYESIRTGAKAALKGGVTTVLDTPHTSPNPDIEL 60 (333)
T ss_dssp EEEE-EEEEEEEGGGTTHTTS--------------------SSHHHHHHHHHHHHHHHHHTTEEEEEEEEESSHCHHHHH
T ss_pred CEEcChhHHhhCcCCcCcccc--------------------CCHHHHHHHHHHHHHHHHhcCeEEEEcCcccCCcccccc
Confidence 699999999999987443322 4556667777778899999999999998322 211
Q ss_pred --HHHH---HHHHcCC-eEEEecccccC-CCCCCcccccCCchHHHHHHHHHHHHhccCCCC-----CeEEEeecccccc
Q 015784 152 --EMAK---AVELLGL-RACLVQSTMDC-GEGLPASWAVRTTDDCIQSQKELYAKHHHAADG-----RIRIWFGIRQIMN 219 (400)
Q Consensus 152 --~~~~---~~~~~g~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 219 (400)
...+ ....... ...+....... ..+..................++++.+...... .+......+....
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (333)
T PF01979_consen 61 RNEIMEGLAAAPKIEPAMTLLGTGSVGGHGEGPNEPPDKNGPHDEAFEGEDFIKFIEEAGSEIKRIDGVIPAISPHNPYT 140 (333)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEECECSEEEECHHHHHHHHSEHHHHHHHHHHHHHHHHHTTTCEEEECEEEEEEHHTTTT
T ss_pred ccccccccccchhhhccccccccccccccccccccccccccCCchhhhHHHHHHHhhhhhhhhccccccccccccccccc
Confidence 1111 1111111 11111111000 000000000000000000122333333322222 3344556667788
Q ss_pred CCHHHHHHHHHHHHH-----c-CCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCC-----CCCeeeEEecCCChh
Q 015784 220 ATDRLLLETRDMARE-----F-KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFL-----QNNLLSAHTVWVNHT 288 (400)
Q Consensus 220 ~~~e~l~~~~~~a~~-----~-~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~h~~~~~~~ 288 (400)
.+.+.+...++.+++ . ++++.+|+.+.......+...+ +...++.+...+.+ +...++.|+.+++++
T Consensus 141 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~ 218 (333)
T PF01979_consen 141 VSDEELREAVELAKEFLAAEKLGIPVHIHVAEGTGEVEAMTHLY--GMSPIEALDHLGLLEEAIDDGVDLIAHGTHLSDE 218 (333)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTHEEEEEESSSHHHHCCCHHHH--SHHHHHHHHHHHSCHHHHHHHCEEEEEHTTSEHH
T ss_pred chhhhhhhHHhhhhhHHHHHhhcccceeeeccCcccceeEeeee--eccchhhhccchhhhhhcccccceeeccccCCHH
Confidence 888889999999888 4 9999999999888766666555 34467777777777 567889999999999
Q ss_pred HHHHHHhcCCeEEECcccccc--------------------c-cCcccHHHHHHc-CCcEEEcCCCCCCCCCCCHHHHHH
Q 015784 289 EIGLLSRAGVKVSHCPASAMR--------------------M-LGFAPIKEMLHA-DICVSLGTDGAPSNNRMSIVDEMY 346 (400)
Q Consensus 289 ~i~~~~~~~~~~~~~p~~~~~--------------------~-~~~~~~~~~~~~-Gv~v~~gtD~~~~~~~~~~~~~~~ 346 (400)
+++++++.+..+..||.++.. + ....++.+++++ |+. +|||+.. ++|+
T Consensus 219 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~--lgtDg~~--------~~l~ 288 (333)
T PF01979_consen 219 EIELLKETGIGIIHCPISNDSAPHKPGKAIMMDGTAEGIYGLGSGGAPLFRMLDKMGVN--LGTDGVA--------EELK 288 (333)
T ss_dssp HHHHHHHHTHEEEEEHHHHHHHHHHTTHHSETTBSBTSBSCTTHHHHHHHHHHHCTTHE--ETTCTTC--------HHHH
T ss_pred HhhhhhccCCccccccchhhhhccccccccccchhccccccccccccchhhhhhhcccc--ccccccc--------cccc
Confidence 999999999999999998765 2 223456667777 888 9999321 7787
Q ss_pred HHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 347 LASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.....+ ++++++|+++|.|||++||+++++|+|++||+|
T Consensus 289 ~~~~~~---------------~~~~~~l~~aT~n~Ak~lg~~~~~G~i~~G~~A 327 (333)
T PF01979_consen 289 LFVRLG---------------ISPEEALKMATINPAKILGLDDDKGSIEPGKDA 327 (333)
T ss_dssp HHHHHH---------------SHHHHHHHHHTHHHHHHTTSTTTSSSSSTTSB-
T ss_pred cccccc---------------ccccccccccchhHHHHcCCCCCEEEeCcCCCc
Confidence 776554 899999999999999999998889999999987
No 85
>PRK10027 cryptic adenine deaminase; Provisional
Probab=99.92 E-value=7.2e-23 Score=195.00 Aligned_cols=299 Identities=15% Similarity=0.152 Sum_probs=181.0
Q ss_pred CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccc
Q 015784 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~ 96 (400)
.+.+++|+|++|+++... . +..++|+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+..+
T Consensus 28 ~~~dllI~ng~vv~~~~~-~-~~~~~V~I~~GrI~~Vg~~~~~-----~~~~~vIDa~G~~v~PGlIDaHvHiess---- 96 (588)
T PRK10027 28 AVADYIIDNVSILDLING-G-EISGPIVIKGRYIAGVGAEYAD-----APALQRIDARGATAVPGFIDAHLHIESS---- 96 (588)
T ss_pred CCCCEEEECcEEEeCCCC-c-EEeeEEEEECCEEEEeCCCCCC-----CCCCeEEECCCCEEEECeEeccccCCcc----
Confidence 456789999999975322 2 3557899999999999764321 1235899999999999999999999651
Q ss_pred ccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc--------CCHHHHHHHHHHcCCeEEEec
Q 015784 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------QHVSEMAKAVELLGLRACLVQ 168 (400)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~--------~~~~~~~~~~~~~g~~~~~~~ 168 (400)
..++++ +. ..++.+|+|++.+... ..++.+.+.+...++.....
T Consensus 97 --------------------~~~p~~-~a------~aal~~G~TtVv~dPhei~nv~g~~gi~~~l~~a~~~p~~~~~~- 148 (588)
T PRK10027 97 --------------------MMTPVT-FE------TATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAEQARQNQYLQ- 148 (588)
T ss_pred --------------------cCCHhH-HH------HHHHhCceEEEEcCCCCcccCCCHHHHHHHHHHhhhCCCeeEEe-
Confidence 122222 21 2478999999998432 22455667777777765432
Q ss_pred ccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCe--EEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCC
Q 015784 169 STMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRI--RIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 246 (400)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~ 246 (400)
.-.+.+..+ .+......-...+..++++ . ...+ .-++...+...-+++.+.++... .+..+.-|+..-
T Consensus 149 -~ps~vpa~~-~~Et~Ga~~~~~~~~~~l~----~-~~v~glgEvMn~~~V~~~d~~~~~ki~~~---~~~~idGH~p~l 218 (588)
T PRK10027 149 -VSSCVPALE-GCDVNGASFTLEQMLAWRD----H-PQVTGLAEMMDYPGVISGQNALLDKLDAF---RHLTLDGHCPGL 218 (588)
T ss_pred -ecccCcCCc-ccccCCCcCCHHHHHHHhc----C-CCceeEEeccCccccccCCHHHHHHHHHh---CCCceECCCCCC
Confidence 111222111 0111111112223333332 1 1122 22344555566677788877743 789999998754
Q ss_pred chhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccccCcccHHHHH-HcC-C
Q 015784 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEML-HAD-I 324 (400)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~G-v 324 (400)
... .+..+...|+. -.|... +.++...-.+.|+.+.+.-.|..+ +...+..+. +.+ -
T Consensus 219 ~g~-------------~L~ay~aaGi~-----sDHE~~-t~eea~eklr~Gm~v~iRegS~~~--nl~~l~~~~~~~~~~ 277 (588)
T PRK10027 219 GGK-------------ELNAYIAAGIE-----NCHESY-QLEEGRRKLQLGMSLMIREGSAAR--NLNALAPLINEFNSP 277 (588)
T ss_pred ChH-------------HHHHHHHcCCC-----CCcccC-CHHHHHHHHHCCCEEEEeCCcccc--CHHHHHHHhhccCCC
Confidence 431 33334444443 357666 555555555889998877554332 111121222 222 3
Q ss_pred cEEEcCCCCCCCC---CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 325 CVSLGTDGAPSNN---RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 325 ~v~~gtD~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+++++||...... ..-+...++.+.. ..++++++|++|+|.|||+++|+++ +|+|++|+.|
T Consensus 278 ~~~l~TDd~~~~~l~~~Ghi~~~vr~av~--------------~~Gi~~~~Ai~mAT~nPA~~lgl~d-~G~IapG~~A 341 (588)
T PRK10027 278 QCMLCTDDRNPWEIAHEGHIDALIRRLIE--------------QHNVPLHVAYRVASWSTARHFGLNH-LGLLAPGKQA 341 (588)
T ss_pred eEEEEcCCCChHHHHhccCHHHHHHHHHH--------------HcCCCHHHHHHHHHHHHHHHcCCCC-CcccCCCCcC
Confidence 6899999864311 0112233444331 2469999999999999999999986 6999999987
No 86
>PRK09061 D-glutamate deacylase; Validated
Probab=99.92 E-value=7e-22 Score=188.13 Aligned_cols=322 Identities=17% Similarity=0.150 Sum_probs=180.0
Q ss_pred CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccc
Q 015784 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~ 96 (400)
.+++++|+|++|+++++. ....++|+|+||+|++|++... .+.++||++|++|+|||||+|+|....
T Consensus 17 ~~~~~li~~~~vid~~~~--~~~~~~v~I~~G~I~~ig~~~~-------~~~~viD~~g~~v~PG~ID~H~H~~~~---- 83 (509)
T PRK09061 17 APYDLVIRNGRVVDPETG--LDAVRDVGIKGGKIAAVGTAAI-------EGDRTIDATGLVVAPGFIDLHAHGQSV---- 83 (509)
T ss_pred ccCCEEEECcEEEeCCCC--eeccceEEEECCEEEEecCCCC-------CCCeEEeCCCCEEecCeEeeeeCCCCC----
Confidence 346789999999985543 3355799999999999997421 246899999999999999999997430
Q ss_pred ccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC-c-CCHHHHHHHHHHcC--CeEEEecccc-
Q 015784 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-G-QHVSEMAKAVELLG--LRACLVQSTM- 171 (400)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~-~-~~~~~~~~~~~~~g--~~~~~~~~~~- 171 (400)
. . ...++..|+|++.++. + .......+.....+ +.........
T Consensus 84 --------------------~---~---------~~~~~~~GvTtvv~~~~~~~p~~~~~~~~~~~~~~vn~~~~~~~~~ 131 (509)
T PRK09061 84 --------------------A---A---------YRMQAFDGVTTALELEAGVLPVARWYAEQAGEGRPLNYGASVGWTP 131 (509)
T ss_pred --------------------c---c---------chhhccCCceeEEeeccCCCCHHHHHHHHHhcCCcceeehhcCcHH
Confidence 0 0 1236778999999873 2 22223333333333 2221111100
Q ss_pred -----cCCCCCCcc------------cc-cCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHH
Q 015784 172 -----DCGEGLPAS------------WA-VRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAR 233 (400)
Q Consensus 172 -----~~~~~~~~~------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~ 233 (400)
..++.+... +. ...+...+.+..+++++....+...++ .........+.+.+..+++.++
T Consensus 132 ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~m~~ll~~al~~Ga~gis--~~~~y~p~~~~~eL~~l~~~A~ 209 (509)
T PRK09061 132 ARIAVLTGPQAEGTIADFGKALGDPRWQERAATPAELAEILELLEQGLDEGALGIG--IGAGYAPGTGHKEYLELARLAA 209 (509)
T ss_pred HHHHHhCCcccccccccccccccccccccCCCCHHHHHHHHHHHHHHHHCCCCEEe--cCCccCCCCCHHHHHHHHHHHH
Confidence 011000000 11 111223344444444433333222222 2222233568889999999999
Q ss_pred HcCCeeeEecCCCch-----hhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC-------hhHHHHHHhcCCeE-
Q 015784 234 EFKTGIHMHVAEIPY-----ENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN-------HTEIGLLSRAGVKV- 300 (400)
Q Consensus 234 ~~~~~v~~H~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~-------~~~i~~~~~~~~~~- 300 (400)
++|.++.+|+.+... +...+ .+.+......+.+..+.|+.... -+.++++++.|+.+
T Consensus 210 ~~g~~v~~H~e~~~~~~~~~e~~av----------~~~i~lA~~~G~rv~IsHlss~g~~~~~~~le~I~~Ar~~Gi~Vt 279 (509)
T PRK09061 210 RAGVPTYTHVRYLSNVDPRSSVDAY----------QELIAAAAETGAHMHICHVNSTSLRDIDRCLALVEKAQAQGLDVT 279 (509)
T ss_pred HcCCEEEEEecCcccCCchhHHHHH----------HHHHHHHHHhCCCEEEEeeccCCcccHHHHHHHHHHHHHcCCcEE
Confidence 999999999986542 11111 12333333344567788887643 13466677777664
Q ss_pred -EECccc-----------cc----c----c----c---C---------------------------------cccHHHHH
Q 015784 301 -SHCPAS-----------AM----R----M----L---G---------------------------------FAPIKEML 320 (400)
Q Consensus 301 -~~~p~~-----------~~----~----~----~---~---------------------------------~~~~~~~~ 320 (400)
.++|.. +. + + . + ...+.+.+
T Consensus 280 ~e~~P~~~~~t~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 359 (509)
T PRK09061 280 TEAYPYGAGSTVVGAAFFDPGWLERMGLGYGSLQWVETGERLLTREELAKLRANDPGGLVLIHFLDEDNPRDRALLDRSV 359 (509)
T ss_pred EEecCcchhhhhhcccccCHHHHHHhCCCHHHheehhcccccCCHHHHHHHhccCCCCeEEEEeccCCCCccchhHHHHh
Confidence 566665 10 0 0 0 0 11133345
Q ss_pred HcCCcEEEcCCCCCCC-------------CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC-
Q 015784 321 HADICVSLGTDGAPSN-------------NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL- 386 (400)
Q Consensus 321 ~~Gv~v~~gtD~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg- 386 (400)
..+-. +++||+.+.. .......+++.+..+.+....+ ......+|++++++++|.+||++||
T Consensus 360 ~~p~~-~i~sD~~p~~~~~~~~~~~~~~~~~~~~~~h~r~~~~~~~~l~~~---v~~~~~isl~~ai~~~T~~pA~~lg~ 435 (509)
T PRK09061 360 LFPGA-AIASDAMPWTWSDGTVYEGDAWPLPEDAVSHPRSAGTFARFLREY---VRERKALSLLEAIRKCTLMPAQILED 435 (509)
T ss_pred CCCCc-eEecCCccccccccccccccccccccCCCCCchhhcchHHHHHHH---HhhcccCCHHHHHHHHHHHHHHHhcc
Confidence 55644 9999985420 0001111111111111100000 0012349999999999999999999
Q ss_pred ----CCCCccccccCcCC
Q 015784 387 ----WDNDIGSLEAGKKV 400 (400)
Q Consensus 387 ----~~~~~G~i~~G~~A 400 (400)
+++ .|+|++|+.|
T Consensus 436 ~~~~l~~-~G~i~~G~~A 452 (509)
T PRK09061 436 SVPAMRR-KGRLQAGADA 452 (509)
T ss_pred ccccccC-CEeeCCCCCc
Confidence 865 4999999987
No 87
>PRK09060 dihydroorotase; Validated
Probab=99.91 E-value=4.1e-22 Score=187.52 Aligned_cols=315 Identities=17% Similarity=0.179 Sum_probs=168.2
Q ss_pred cccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccc
Q 015784 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (400)
Q Consensus 18 ~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~ 97 (400)
+++++|+|++|+++++ . ..++|+|+||+|++|++... ..+.++||++|++|+|||||+|+|+...
T Consensus 4 ~~d~~i~~~~v~~~~~---~-~~~~i~i~~g~I~~i~~~~~------~~~~~~iD~~G~~v~PG~ID~HvH~~~~----- 68 (444)
T PRK09060 4 TFDLILKGGTVVNPDG---E-GRADIGIRDGRIAAIGDLSG------ASAGEVIDCRGLHVLPGVIDSQVHFREP----- 68 (444)
T ss_pred cCcEEEECCEEECCCC---C-eeeEEEEECCEEEEecCCCC------CCCceEEECCCCEEccCEEeccccccCC-----
Confidence 3578999999998542 2 35799999999999986432 1245899999999999999999998541
Q ss_pred cCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC-----HHHHHHHHHHcCCeEEEeccccc
Q 015784 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAVELLGLRACLVQSTMD 172 (400)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~ 172 (400)
.....++... ..+.++++|||++.++.... .+......+...-+...-..+..
T Consensus 69 ------------------~~~~~e~~~t----~~~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~a~~~~~~d~~~~~ 126 (444)
T PRK09060 69 ------------------GLEHKEDLET----GSRAAVLGGVTAVFEMPNTNPLTTTAEALADKLARARHRMHCDFAFYV 126 (444)
T ss_pred ------------------CCCccchHHH----HHHHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhcccceeeEEEEe
Confidence 0011122222 23568899999999986321 22222222221111111000100
Q ss_pred CCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeec--cccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhh
Q 015784 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGI--RQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (400)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (400)
.+ . . ....+..++. .+. +...++.++.. ......+++.+..++ ++.+..+.+|+.+... .
T Consensus 127 ~~---~-------~-~~~~~l~el~-~~~--gv~g~k~fm~~~~~~~~~~d~~~l~~~~---~~~~~~v~~H~E~~~l-~ 188 (444)
T PRK09060 127 GG---T-------R-DNADELAELE-RLP--GCAGIKVFMGSSTGDLLVEDDEGLRRIL---RNGRRRAAFHSEDEYR-L 188 (444)
T ss_pred cc---C-------C-CCHHHHHHHH-hhc--CceEEEEEeccCCCCcccCCHHHHHHHH---HhCCCeEEEECCCHHH-H
Confidence 00 0 0 0011122211 111 11224433321 111233455565554 4458899999865332 1
Q ss_pred hHHhhhc--------CCC-C-----ChH-HHHhHhCCCCCCeeeEEecCCChhHHHHHHhc--CCeEEECccccc----c
Q 015784 251 QVVMDTR--------KVD-H-----GTV-TFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRA--GVKVSHCPASAM----R 309 (400)
Q Consensus 251 ~~~~~~~--------~~~-~-----~~~-~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~--~~~~~~~p~~~~----~ 309 (400)
....... ... . ..+ +.+......+.+..+.|... .+.++.+.+. .+.+.+||...+ .
T Consensus 189 ~~~~~~~~~g~~~~~~~~~p~~aE~~av~~~~~la~~~~~~lhi~h~st--~~~v~~i~~~~~~vt~ev~ph~l~l~~~~ 266 (444)
T PRK09060 189 RERKGLRVEGDPSSHPVWRDEEAALLATRRLVRLARETGRRIHVLHVST--AEEIDFLADHKDVATVEVTPHHLTLAAPE 266 (444)
T ss_pred HHHHHHHhcCCcccccccCCHHHHHHHHHHHHHHHHHHCCCEEEEeCCC--HHHHHHHHHhCCCeEEEeChHHhccCchh
Confidence 1111000 000 0 011 12222333444565666664 4555555443 366777774311 0
Q ss_pred --------------c---cCcccHHHHHHcCCcEEEcCCCCCCCC------------CCCHHHHHHHHHHHhcccccccC
Q 015784 310 --------------M---LGFAPIKEMLHADICVSLGTDGAPSNN------------RMSIVDEMYLASLINKGREVFAN 360 (400)
Q Consensus 310 --------------~---~~~~~~~~~~~~Gv~v~~gtD~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~ 360 (400)
+ .....+.+.+++|+..+++|||.|... +..- -+......+..
T Consensus 267 ~~~~~~~~~k~~PPlr~~~~~~~l~~al~~G~id~i~sDh~p~~~~~k~~~~~~~~~G~~g-~e~~~~l~~~~------- 338 (444)
T PRK09060 267 CYERLGTLAQMNPPIRDARHRDGLWRGVRQGVVDVLGSDHAPHTLEEKAKPYPASPSGMTG-VQTLVPIMLDH------- 338 (444)
T ss_pred hcccCCceEEEeCCCCCHHHHHHHHHHHhCCCccEEecCCCCCCHHHhcCCcccCCCCccc-HHHHHHHHHHH-------
Confidence 0 111234566778999999999986521 0110 11111111110
Q ss_pred CCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 361 GTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 361 ~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.....++++++++++|.|||++||+.+ +|+|++|+.|
T Consensus 339 --v~~g~l~~~~~~~~~s~~pa~~~gl~~-~G~l~~G~~A 375 (444)
T PRK09060 339 --VNAGRLSLERFVDLTSAGPARIFGIAG-KGRIAVGYDA 375 (444)
T ss_pred --HHcCCCCHHHHHHHHhHhHHHHhCCCC-CCcccCCCcC
Confidence 112349999999999999999999954 5999999987
No 88
>PRK08417 dihydroorotase; Provisional
Probab=99.91 E-value=7.2e-23 Score=189.26 Aligned_cols=292 Identities=14% Similarity=0.141 Sum_probs=159.5
Q ss_pred EEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhh
Q 015784 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEED 122 (400)
Q Consensus 43 i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (400)
|+|+||+|++|++.. .+.++||++|++|+|||||+|+|+.. ..+..++
T Consensus 1 i~I~dG~I~~i~~~~--------~~~~viDa~g~~vlPG~ID~HvH~~~------------------------~~~~~e~ 48 (386)
T PRK08417 1 IRIKDGKITEIGSDL--------KGEEILDAKGKTLLPALVDLNVSLKN------------------------DSLSSKN 48 (386)
T ss_pred CEEECCEEEEecCCC--------CCCeEEECCCCEEccCeeEEeeeeCC------------------------CCcChhh
Confidence 689999999998642 14689999999999999999999943 1122233
Q ss_pred HHHHHHHHHHHHHhcCcceeeccCcCCH-----HHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHH
Q 015784 123 SYISTLLCGIELIHSGVTCFAEAGGQHV-----SEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELY 197 (400)
Q Consensus 123 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (400)
... ..+.++++|||++.+|+.... +......+..+-.. ..+.+... .. .......+...
T Consensus 49 ~~t----~s~aA~aGGvTtv~dmpnt~P~~~~~~~~~~~~~~~~~~~---~~~~~~~~------~~-~~~~~~~~i~~-- 112 (386)
T PRK08417 49 LKS----LENECLKGGVGSIVLYPDSTPAIDNEIALELINSAQRELP---MQIFPSIR------AL-DEDGKLSNIAT-- 112 (386)
T ss_pred HHH----HHHHHHcCCcEEEEeCCCCCCCCCCHHHHHHHHHHhhccC---CcEEEEEE------EE-CCCccHHHHHH--
Confidence 222 336799999999999874221 12211111111100 00111100 00 01111222222
Q ss_pred HHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhh-------hcCCCC-C-----hH
Q 015784 198 AKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD-------TRKVDH-G-----TV 264 (400)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~-------~~~~~~-~-----~~ 264 (400)
+... +...+.. ....+++.+.++++.+++.|+++.+|+.+.......... .+...+ . .+
T Consensus 113 --l~~~--Gv~~~k~----~~~~~~~~l~~~~~~a~~~g~~V~~HaEd~~~~~~~~~~~g~~~~~~~~~~rp~~aE~~~v 184 (386)
T PRK08417 113 --LLKK--GAKALEL----SSDLDANLLKVIAQYAKMLDVPIFCRCEDSSFDDSGVMNDGELSFELGLPGIPSIAETKEV 184 (386)
T ss_pred --HHHC--CCEEEEC----CCCCCHHHHHHHHHHHHHcCCEEEEeCCCHHHhhHHHHhcChhhHHhCCCCCCHHHHHHHH
Confidence 2222 2221111 114678889999999999999999999764321111110 000000 0 11
Q ss_pred -HHHhHhCCCCCCeeeEEecCCC-hhHHHHHHhcC--CeEEECccccc-------c----ccCccc---------HHHHH
Q 015784 265 -TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAG--VKVSHCPASAM-------R----MLGFAP---------IKEML 320 (400)
Q Consensus 265 -~~l~~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~--~~~~~~p~~~~-------~----~~~~~~---------~~~~~ 320 (400)
+.+......+.+..+.|...-. -+.++..++.| +.+.+||...+ . ++--+| +.+.+
T Consensus 185 ~~~~~la~~~~~~lhi~hvS~~~~~~~i~~ak~~g~~vt~ev~ph~L~l~~~~~~~~~~~~k~~PPlR~~~d~~~L~~~l 264 (386)
T PRK08417 185 AKMKELAKFYKNKVLFDTLALPRSLELLDKFKSEGEKLLKEVSIHHLILDDSACENFNTAAKLNPPLRSKEDRLALLEAL 264 (386)
T ss_pred HHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCCEEEEechHHHeeCHHHhcCcCcccEECCCCCCHHHHHHHHHHH
Confidence 2222333344455555554421 13344455565 55688887422 0 010123 34456
Q ss_pred HcCCcEEEcCCCCCCCCC---CCHH--------HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 321 HADICVSLGTDGAPSNNR---MSIV--------DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 321 ~~Gv~v~~gtD~~~~~~~---~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
..|...+++|||.|.... .+++ -+......+... .....++++++++++|.|||++||+.
T Consensus 265 ~~g~Id~i~SDHaP~~~~~K~~~~~~a~~G~~g~e~~~~~~~~~~--------v~~~~~~~~~~~~~~t~~pA~~lgl~- 335 (386)
T PRK08417 265 KEGKIDFLTSLHSAKSNSKKDLAFDEAAFGIDSICEYFSLCYTYL--------VKEGIITWSELSRFTSYNPAQFLGLN- 335 (386)
T ss_pred hcCCceEEEcCCCCCCHHHccCCHhHCCCCchHHHHHHHHHHHHH--------HhcCCCCHHHHHHHHHHHHHHHhCCC-
Confidence 789999999999875210 0122 111111111100 12345899999999999999999996
Q ss_pred CccccccCcCC
Q 015784 390 DIGSLEAGKKV 400 (400)
Q Consensus 390 ~~G~i~~G~~A 400 (400)
+ |+|++|+.|
T Consensus 336 ~-G~l~~G~~A 345 (386)
T PRK08417 336 S-GEIEVGKEA 345 (386)
T ss_pred C-CccCCCCcC
Confidence 4 999999987
No 89
>PRK09059 dihydroorotase; Validated
Probab=99.91 E-value=5.2e-22 Score=185.41 Aligned_cols=319 Identities=13% Similarity=0.111 Sum_probs=173.7
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
.+++|+|++|+++++. ...+++|+|+||+|++|++..... ..+ .+.++||++|++|+|||||+|+|+...
T Consensus 3 ~~~~i~n~~v~~~~~~--~~~~~~v~I~~G~I~~i~~~~~~~-~~~-~~~~viDa~G~~v~PG~ID~HvH~~~~------ 72 (429)
T PRK09059 3 RPILLANARIIDPSRG--LDEIGTVLIEDGVIVAAGKGAGNQ-GAP-EGAEIVDCAGKAVAPGLVDARVFVGEP------ 72 (429)
T ss_pred cCEEEEeeEEECCCCC--cccceEEEEECCEEEEecCccccc-cCC-CCCeEEECCCCEEeccEEecccccCCC------
Confidence 4689999999976532 335789999999999998743110 011 245899999999999999999999531
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC-----HH---HHHHHHHHc-CCeEEEecc
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VS---EMAKAVELL-GLRACLVQS 169 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~-----~~---~~~~~~~~~-g~~~~~~~~ 169 (400)
.....++ + ....+.++.+|||++.+++... .+ ...+.++.. .+...+...
T Consensus 73 -----------------~~~~~e~-~---~~~s~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~ 131 (429)
T PRK09059 73 -----------------GAEHRET-I---ASASRAAAAGGVTSIIMMPDTDPVIDDVALVEFVKRTARDTAIVNIHPAAA 131 (429)
T ss_pred -----------------Cchhhhh-H---HHHHHHHHhCCcEEEEeccCCCCCCCCHHHHHHHHHHhcccCcccEEEEeE
Confidence 0000111 1 1233568899999999986321 12 112222211 222222111
Q ss_pred cccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchh
Q 015784 170 TMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (400)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~ 249 (400)
. ..+ .....+.+...+. .. .+..+.. ......+...+.++++.+++.|.++.+|+.+....
T Consensus 132 ~-~~~----------~~~~~l~e~~~l~----~~---Gv~~f~~-~~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~l~ 192 (429)
T PRK09059 132 I-TKG----------LAGEEMTEFGLLR----AA---GAVAFTD-GRRSVANTQVMRRALTYARDFDAVIVHETRDPDLG 192 (429)
T ss_pred E-ecC----------CCCcchHHHHHHH----hc---CcEEEec-CCcccCCHHHHHHHHHHHHhcCCEEEEecCChhhh
Confidence 1 100 0111122222221 11 2222221 11223456678899999999999999998664421
Q ss_pred hh------HHhhhcC-CCC-C-----hH-HHHhHhCCCCCCeeeEEecCCC-hhHHHHHHhcC--CeEEECccccc----
Q 015784 250 NQ------VVMDTRK-VDH-G-----TV-TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAG--VKVSHCPASAM---- 308 (400)
Q Consensus 250 ~~------~~~~~~~-~~~-~-----~~-~~l~~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~--~~~~~~p~~~~---- 308 (400)
.. ......+ ..+ . .+ +.+......+.+..+.|..... -+.++.+++.| +.+.+||..-+
T Consensus 193 ~~~~~~~~~~~~~~~~~~rP~~aE~~av~r~~~la~~~~~~~hi~hvs~~~~~~~i~~ak~~g~~vt~ev~phhL~l~~~ 272 (429)
T PRK09059 193 GNGVMNEGLFASWLGLSGIPREAEVIPLERDLRLAALTRGRYHAAQISCAESAEALRRAKDRGLKVTAGVSINHLSLNEN 272 (429)
T ss_pred cCCCcCCcHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEEecCCHHHHHHHHHHHHCCCCEEEeecHHHHhccHH
Confidence 10 0000000 000 0 11 1112222333455555554422 23455556666 44567776422
Q ss_pred -------cccCccc---------HHHHHHcCCcEEEcCCCCCCCCCC---CHH---------HHH-HHHHHHhccccccc
Q 015784 309 -------RMLGFAP---------IKEMLHADICVSLGTDGAPSNNRM---SIV---------DEM-YLASLINKGREVFA 359 (400)
Q Consensus 309 -------~~~~~~~---------~~~~~~~Gv~v~~gtD~~~~~~~~---~~~---------~~~-~~~~~~~~~~~~~~ 359 (400)
.+.-.+| +.+.+..|...+++|||.+..... +++ ..+ ..+...
T Consensus 273 ~~~~~~~~~kvnPPLR~~~d~~~L~~~l~~g~id~i~sDh~p~~~~~K~~~~~~~~~G~~gle~~l~~~~~~-------- 344 (429)
T PRK09059 273 DIGEYRTFFKLSPPLRTEDDRVAMVEAVASGTIDIIVSSHDPQDVDTKRLPFSEAAAGAIGLETLLAAALRL-------- 344 (429)
T ss_pred HHhccCCccEEcCCCCCHHHHHHHHHHHHcCCCcEEEeCCCCCCHHHCcCChhhCCCCcccHHHHHHHHHHH--------
Confidence 0011123 344566798899999998652100 111 111 111111
Q ss_pred CCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 360 NGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 360 ~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.....++++++++++|.|||+++|+. .|+|++|++|
T Consensus 345 ---v~~~~l~l~~~~~~~s~nPA~~~gl~--~G~l~~G~~A 380 (429)
T PRK09059 345 ---YHNGEVPLLRLIEALSTRPAEIFGLP--AGTLKPGAPA 380 (429)
T ss_pred ---HHcCCCCHHHHHHHHhHHHHHHhCCC--cCcccCCCcC
Confidence 12345899999999999999999995 4999999987
No 90
>PRK06886 hypothetical protein; Validated
Probab=99.91 E-value=7.1e-22 Score=175.88 Aligned_cols=273 Identities=18% Similarity=0.148 Sum_probs=182.8
Q ss_pred ecccccCcCCccccccccc-----CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC-------c
Q 015784 80 PGFVNTHVHTSQQLAKGIA-----DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-------G 147 (400)
Q Consensus 80 PG~iD~H~H~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~-------~ 147 (400)
=||||+|+|+......+.. ...++.+.+..+ ......++.++.+..+...++.++..|+|.++.+- .
T Consensus 20 ~gfv~~H~HlDk~~~~~~~~~~~~~~g~l~e~i~~~-~~~k~~~t~~dv~~Ra~~~l~~~~~~Gtt~iRtHvdvd~~~~l 98 (329)
T PRK06886 20 GGWVNAHAHADRAFTMTPEKIAIYHYANLQQKWDLV-DEVKRNSTVEDYYARFSQAIELMISQGVTAFGTFVDIDPICED 98 (329)
T ss_pred cCCccccccccccccCCCccccccCCCCHHHHHHHH-HHHhccCCHHHHHHHHHHHHHHHHHcCcccEeeeeccCCCccc
Confidence 3899999999876654431 234444433311 12235678888888888999999999999999642 2
Q ss_pred CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccc---cccCCHHH
Q 015784 148 QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ---IMNATDRL 224 (400)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~e~ 224 (400)
...+.+.+..++..-+.-+-...+.+.. +.... ..+++++.... .+.+..+ |+. ....+++.
T Consensus 99 ~~~~a~~~~r~~~~~~idlq~vafPq~g-----~~~~~-------~~~l~~~al~~-advvGGi--P~~~~~~~~~~~e~ 163 (329)
T PRK06886 99 RAIIAAHKAREVYKHDIILKFANQTLKG-----VIEPT-------AKKWFDIGSEM-VDMIGGL--PYRDELDYGRGLEA 163 (329)
T ss_pred cHHHHHHHHHHHhcCcceEEEEecChhh-----ccCcc-------HHHHHHHHHHh-CCEEeCc--cCCcCCCCCCCHHH
Confidence 2344455554443333322222222211 11101 12323222222 1233322 332 23567889
Q ss_pred HHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhH-------HHHHHhcC
Q 015784 225 LLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE-------IGLLSRAG 297 (400)
Q Consensus 225 l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~-------i~~~~~~~ 297 (400)
+..++++|+++|++|.+|+.++........+. ..+.....|..+ +.++.|+..++..+ ++++++.|
T Consensus 164 l~~~~~lA~~~g~~Id~Hlde~~~~~~~~le~------l~~~~~~~Gl~g-rV~~sH~~~L~~~~~~~~~~~i~~La~ag 236 (329)
T PRK06886 164 MDILLDTAKSLGKMVHVHVDQFNTPKEKETEQ------LCDKTIEHGMQG-RVVAIHGISIGAHSKEYRYRLYQKMREAD 236 (329)
T ss_pred HHHHHHHHHHcCCCeEEeECCCCchhHHHHHH------HHHHHHHcCCCC-CEEEEEeccccCcChhhHHHHHHHHHHcC
Confidence 99999999999999999999876543322221 122233667765 79999999998664 99999999
Q ss_pred CeEEECcccccc---------c-cCcccHHHHHHcCCcEEEcCCCCC----CCCCCCHHHHHHHHHHHhcccccccCCCC
Q 015784 298 VKVSHCPASAMR---------M-LGFAPIKEMLHADICVSLGTDGAP----SNNRMSIVDEMYLASLINKGREVFANGTT 363 (400)
Q Consensus 298 ~~~~~~p~~~~~---------~-~~~~~~~~~~~~Gv~v~~gtD~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (400)
+.+++||.+|+. . .+..|+++|+++||+|++|||+.. +..+.|++++++.+....+.
T Consensus 237 i~Vv~~P~snl~l~~~~~~~p~~rGv~pv~eL~~aGV~V~lGtDnv~D~~~p~g~~Dmle~~~l~~~~~~~--------- 307 (329)
T PRK06886 237 MMVIACPMAWIDSNRKEDLMPFHNALTPADEMIPEGITVALGTDNICDYMVPLCEGDMWQELSLLAAGCRF--------- 307 (329)
T ss_pred CeEEECchhhhhhccccccCcCCCCCCCHHHHHHCCCeEEEecCCCcccCCCCCCCCHHHHHHHHHHHcCC---------
Confidence 999999998752 2 567899999999999999999863 23578999999998766531
Q ss_pred CCCCCCHHHHHHHHhHHHHHHcCCC
Q 015784 364 DPAALPAETVLRMATINGAKSVLWD 388 (400)
Q Consensus 364 ~~~~l~~~~al~~~T~~~A~~lg~~ 388 (400)
.++.++|+++|.|+|++||++
T Consensus 308 ----~~~~~~l~maT~~gAraLgl~ 328 (329)
T PRK06886 308 ----YDLDEMVNIASINGRKVLGLE 328 (329)
T ss_pred ----CCHHHHHHHHhhhHHHHhCCC
Confidence 368999999999999999985
No 91
>TIGR00857 pyrC_multi dihydroorotase, multifunctional complex type. All proteins described by this model should represent active and inactive dihydroorotase per se and functionally equivalent domains of multifunctional proteins from higher eukaryotes, but exclude related proteins such as allantoinase.
Probab=99.91 E-value=1e-21 Score=183.40 Aligned_cols=302 Identities=20% Similarity=0.188 Sum_probs=164.4
Q ss_pred eceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCCCChhHhhhhccccccCCC
Q 015784 39 RNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNM 118 (400)
Q Consensus 39 ~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (400)
.+++|+|+||+|++|++... + .+.++||++|++|+|||||+|+|+... ...
T Consensus 4 ~~~~v~I~~g~I~~i~~~~~-----~-~~~~~ida~g~~v~PG~ID~H~H~~~~-----------------------~~~ 54 (411)
T TIGR00857 4 TEVDILVEGGRIKKIGKLRI-----P-PDAEVIDAKGLLVLPGFIDLHVHLRDP-----------------------GEE 54 (411)
T ss_pred EEEEEEEECCEEEEeeccCC-----C-CCCeEEECCCCEEecCEEEcccCCCCC-----------------------CCc
Confidence 45799999999999974211 1 245799999999999999999999530 011
Q ss_pred ChhhHHHHHHHHHHHHHhcCcceeeccCcC-----CHHHHHHHHHHcC----CeEEEecccccCCCCCCcccccCCchHH
Q 015784 119 TEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVSEMAKAVELLG----LRACLVQSTMDCGEGLPASWAVRTTDDC 189 (400)
Q Consensus 119 ~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-----~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (400)
..++.. .....++.+|||++.++... ..+......+... +...+..... .+ .....
T Consensus 55 ~~~~~~----~~~~~~~~~GvTtv~~~~~t~p~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~-~~----------~~~~~ 119 (411)
T TIGR00857 55 YKEDIE----SGSKAAAHGGFTTVADMPNTKPPIDTPETLEWKLQRLKKVSLVDVHLYGGVT-QG----------NQGKE 119 (411)
T ss_pred cHhHHH----HHHHHHHhCCeEEEEEecCCCCCCCcHHHHHHHHHHhccCCcccEEEEEEEe-cC----------Ccccc
Confidence 112211 12356899999999997532 1222211111111 1111111110 00 00011
Q ss_pred HHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHh-------hhcCCCC-
Q 015784 190 IQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM-------DTRKVDH- 261 (400)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~-------~~~~~~~- 261 (400)
+.+...+. .. +.+...+........++..+.++++.++++|+++.+|+.+......... ..+-..+
T Consensus 120 l~e~~~l~----~~--Gv~g~~f~~~~~~~~~~~~l~~~~~~a~~~g~~v~iH~E~~~l~~~~~~~~g~~~~~~~~~~~p 193 (411)
T TIGR00857 120 LTEAYELK----EA--GAVGRMFTDDGSEVQDILSMRRALEYAAIAGVPIALHAEDPDLIYGGVMHEGPSAAQLGLPARP 193 (411)
T ss_pred HHHHHHHH----HC--CcEEEEEEeCCcccCCHHHHHHHHHHHHHcCCEEEEecCCHHHHhhhhhcCCcccHhhCCCCCC
Confidence 22222221 11 2222112222223457788999999999999999999975432111100 0000000
Q ss_pred -----ChH-HHHhHhCCCCCCeeeEEecCCC-hhHHHHHHhcC--CeEEECccccc-------------------cc-cC
Q 015784 262 -----GTV-TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAG--VKVSHCPASAM-------------------RM-LG 312 (400)
Q Consensus 262 -----~~~-~~l~~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~--~~~~~~p~~~~-------------------~~-~~ 312 (400)
..+ +.+......+.+..+.|..... -+.++..++.| +.+.+||.+.+ +. .+
T Consensus 194 ~~aE~~ai~~~~~la~~~~~~~~i~Hvs~~~~l~~i~~a~~~g~~v~~ev~ph~L~~~~~~~~~~~~~~k~~Pplr~~~~ 273 (411)
T TIGR00857 194 PEAEEVAVARLLELAKHAGCPVHICHISTKESLELIVKAKSQGIKITAEVTPHHLLLSEEDVARLDGNGKVNPPLREKED 273 (411)
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHHHHHcCCcEEEeechhhheecHHHHhCCCccEEEcCCCCCHHH
Confidence 011 2222222334566666766522 23455556665 55677885421 00 11
Q ss_pred cccHHHHHHcCCcEEEcCCCCCCCCCC---CHH--------HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHH
Q 015784 313 FAPIKEMLHADICVSLGTDGAPSNNRM---SIV--------DEMYLASLINKGREVFANGTTDPAALPAETVLRMATING 381 (400)
Q Consensus 313 ~~~~~~~~~~Gv~v~~gtD~~~~~~~~---~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~ 381 (400)
...+.+.+..|...+++|||.|..... +++ -+......+.. ....+++++++++++|.||
T Consensus 274 ~~~L~~~l~~g~i~~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~~~~~~~~---------~~~~~~~~~~~~~~~t~~p 344 (411)
T TIGR00857 274 RLALIEGLKDGIIDIIATDHAPHTLEEKTKEFAAAPPGIPGLETALPLLLQL---------LVKGLISLKDLIRMLSINP 344 (411)
T ss_pred HHHHHHHHhcCCCcEEEcCCCCCChHHccCCHhhCCCCceeHHHHHHHHHHH---------HHhCCCCHHHHHHHHhHHH
Confidence 234566788899999999998652100 011 01111111111 0123599999999999999
Q ss_pred HHHcCCCCCccccccCcCC
Q 015784 382 AKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 382 A~~lg~~~~~G~i~~G~~A 400 (400)
|+++|++++ |+|++|+.|
T Consensus 345 a~~~g~~~~-G~l~~G~~A 362 (411)
T TIGR00857 345 ARIFGLPDK-GTLEEGNPA 362 (411)
T ss_pred HHHhCCCCC-CccCCCCcC
Confidence 999999765 999999987
No 92
>TIGR03583 EF_0837 probable amidohydrolase EF_0837/AHA_3915. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. These proteins resemble aminohydrolases (see pfam01979), including dihydroorotases. The function is unknown.
Probab=99.90 E-value=1.4e-21 Score=180.22 Aligned_cols=297 Identities=14% Similarity=0.127 Sum_probs=164.3
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCC-cEeeecccccCcCCccccccccc
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQS-QILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g-~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
+++|+|++|+++ . ..+|+|+||||++|++.... .+.++||++| ++|+|||||+|+|+....
T Consensus 2 ~~~i~n~~i~~~--~-----~~~v~i~~g~I~~v~~~~~~------~~~~~iD~~g~~~l~PG~ID~H~H~~~~~----- 63 (365)
T TIGR03583 2 DLLIKNGRTVNG--T-----PVDIAIEDGKIAAVGTTITG------SAKQTIDLEGETYVSAGWIDDHTHCFPKS----- 63 (365)
T ss_pred cEEEECcEEecC--C-----eeEEEEECCEEEEecCCCCC------CCCeEEECCCCeEEecCEEEeeeccCCCc-----
Confidence 589999999963 1 23899999999999864321 2358999999 999999999999985310
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC---cCCHHHHHHHHHHcCCeEEEecccccCCC
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG---GQHVSEMAKAVELLGLRACLVQSTMDCGE 175 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 175 (400)
..+ ..+ .. ..++..|||++.+++ ....+...+..+..+.+..........|.
T Consensus 64 -----------------~~~-~~~-~~------~~a~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~G~ 118 (365)
T TIGR03583 64 -----------------ALY-YDE-PD------EIGVKTGVTTVVDAGSTGADDIDDFYRLAQQAKTNVFALLNISRIGL 118 (365)
T ss_pred -----------------ccc-cCC-Hh------HhhhcCceeEEEeCCCCCCCCHHHHHHHHHhhCCcEEEEeeehhccc
Confidence 000 011 00 125778999999864 33445555555554433322111111111
Q ss_pred CCCcccccCCchHHHHHHHHHHHHhccCCCCCe---EEEeeccc--cccCCHHHHHHHHHHHHHcCCeeeEecCCCchhh
Q 015784 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRI---RIWFGIRQ--IMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (400)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (400)
.++...............+.++.+. ..+ +..+.+.. ...+++..+.+.+..+ +.++++.+|+.+.....
T Consensus 119 -~~~~~~~~~~~~~~~~l~~~~~~~~----~~vv~~~~~~t~~~i~E~gl~~~~~~~~l~~~-~~~~pv~vH~~~a~~~~ 192 (365)
T TIGR03583 119 -VAQDELADLSNLDASAVKQAVERYP----DFIVGLKARMSKSVVGDNGIEPLEIAKQIQQE-NLELPLMVHIGSAPPEL 192 (365)
T ss_pred -cChhhhhChHHhHHHHHHHHHHhCc----CcEEEEEEeecccccccCCcCHHHHHHHHHHh-cCCCcEEEEeCCCccCH
Confidence 0110000001112222333333222 112 22233221 1123344454444443 68999999998877643
Q ss_pred hHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCCh-----------hHHHHHHhcCCeEEECc-cccccccCcccHHH
Q 015784 251 QVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-----------TEIGLLSRAGVKVSHCP-ASAMRMLGFAPIKE 318 (400)
Q Consensus 251 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~-----------~~i~~~~~~~~~~~~~p-~~~~~~~~~~~~~~ 318 (400)
..+. ..... + ..+.|+..-.+ +.+....+.|+.+...- ...... .....
T Consensus 193 ~~i~-------------~~~~~-g--~~~~H~fng~~~~~~r~~g~~~~~~~~~l~~G~i~d~~hg~~~~~~---~~~~~ 253 (365)
T TIGR03583 193 DEIL-------------ALMEK-G--DVLTHCFNGKPNGILRETGEVKPSVLEAYNRGVILDVGHGTASFSF---HVAEK 253 (365)
T ss_pred HHHH-------------HHhcC-C--CeeeeeecCCCCCCCCCcchHHHHHHHHHhCeEEEEeCCCCCCchH---HHHHH
Confidence 3322 22211 1 24678775443 56666667787766542 211111 11233
Q ss_pred HHHcC-CcEEEcCCCCCCC----CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccc
Q 015784 319 MLHAD-ICVSLGTDGAPSN----NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGS 393 (400)
Q Consensus 319 ~~~~G-v~v~~gtD~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~ 393 (400)
+...+ +.++.++|.+..+ +...+...++... ..+++++++++++|.|||+++|+++ .|+
T Consensus 254 ~~~~~~~~~td~~d~~~~~~~~gp~~~l~~~~~~~~---------------~~g~~~~ea~~~~t~npa~~~gl~~-~g~ 317 (365)
T TIGR03583 254 AKRAGIFPDTISTDIYIRNRINGPVYSLATVMSKFL---------------ALGYSLEEVIEKVTKNAAEILKLTQ-KGR 317 (365)
T ss_pred HHhCCCCCcccccccccCCCccCccccHHHHHHHHH---------------HcCCCHHHHHHHHHHHHHHHhCCCC-CCC
Confidence 44445 3456667653221 1223444444433 1259999999999999999999975 799
Q ss_pred cccCcCC
Q 015784 394 LEAGKKV 400 (400)
Q Consensus 394 i~~G~~A 400 (400)
|++|+.|
T Consensus 318 i~~g~~a 324 (365)
T TIGR03583 318 LQEGYDA 324 (365)
T ss_pred cCCCCcc
Confidence 9999987
No 93
>COG3454 Metal-dependent hydrolase involved in phosphonate metabolism [Inorganic ion transport and metabolism]
Probab=99.89 E-value=7.8e-22 Score=166.24 Aligned_cols=139 Identities=12% Similarity=0.117 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEEC
Q 015784 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHC 303 (400)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~ 303 (400)
....+...|+++|+.+..|-+.+.+.++.. ...|+ .+ -....+.+..+...+.|..+.+.
T Consensus 211 ~r~~i~~~c~~rgI~lASHDDaT~~hV~es--------------~~~Gv-----~i-AEFPtT~eAA~asr~~Gm~VlMG 270 (377)
T COG3454 211 NRQAIAALCRERGIALASHDDATVEHVAES--------------HGLGV-----AI-AEFPTTVEAAKASRELGMQVLMG 270 (377)
T ss_pred hHHHHHHHHHHcCCceecCCcCcHHHHHHH--------------HhcCe-----eE-EeCccHHHHHHHHHHhCchhhcC
Confidence 455666889999999999986665533322 22221 11 11222455566666778887766
Q ss_pred ccccccc---cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHH
Q 015784 304 PASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATIN 380 (400)
Q Consensus 304 p~~~~~~---~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~ 380 (400)
...-.+. .|--..+++.+.|+...++||+.|.+ ++...+...... ..++..+|++|.|.|
T Consensus 271 APNivrGgSHsGNvsA~ela~~glLDiLsSDY~P~S----Ll~A~F~La~~~-------------~~~~lpqAvalvt~n 333 (377)
T COG3454 271 APNIVRGGSHSGNVSARELAQHGLLDILSSDYVPAS----LLHAAFRLADLG-------------SNISLPQAVALVTKN 333 (377)
T ss_pred CCceeccCCcccchhHHHHHhCCceeeecccCCcHH----HHHHHHHHhhhh-------------cccCHHHHHHHhccC
Confidence 4443443 23345788999999999999987652 555444433222 236899999999999
Q ss_pred HHHHcCCCCCccccccCcCC
Q 015784 381 GAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 381 ~A~~lg~~~~~G~i~~G~~A 400 (400)
||+++|+.|| |+|++|++|
T Consensus 334 PA~algl~DR-G~Ia~GlrA 352 (377)
T COG3454 334 PARALGLTDR-GRIAPGLRA 352 (377)
T ss_pred HHHhcCCCcc-ccccccccc
Confidence 9999999975 999999987
No 94
>TIGR03121 one_C_dehyd_A formylmethanofuran dehydrogenase subunit A. Members of this largely archaeal protein family are subunit A of the formylmethanofuran dehydrogenase. Nomenclature in some bacteria may reflect inclusion of the formyltransferase described by TIGR03119 as part of the complex, and therefore call this protein formyltransferase/hydrolase complex Fhc subunit A. Note that this model does not distinguish tungsten (FwdA) from molybdenum-containing (FmdA) forms of this enzyme; a single gene from this family is expressed constitutively in Methanobacterium thermoautotrophicum, which has both tungsten and molybdenum forms and may work interchangeably.
Probab=99.88 E-value=2.7e-20 Score=173.41 Aligned_cols=132 Identities=14% Similarity=0.118 Sum_probs=79.3
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|+++... ...+.++|+|+||+|++|++..+ ...++||++|++|+|||||+|+|+.....-. ...
T Consensus 2 ~iIkng~I~dp~~~-~~~~~~dI~IedGkIveIg~~~~-------~~~eVIDa~G~vVmPGfID~HvHg~gG~~~~-~R~ 72 (556)
T TIGR03121 2 ILIKNGTVYDPANG-IDGEVMDIFIRDGKIVEPVSGGT-------KPAKVIDASGKLVMAGGVDSHTHIAGPKVNV-GRL 72 (556)
T ss_pred EEEEeEEEEcCCCC-ccccccEEEEECCEEEEecCCCC-------CCCeEEECCCCEEEeCEEeeeECCCcccccc-ccc
Confidence 68999999985422 11245799999999999986422 1348999999999999999999997621110 000
Q ss_pred CChhHhhhhccccccCCCChh--hHHHHHHHHHHHHHhcCcceeeccC--cCCHHHHHHHHHHcCC
Q 015784 101 VDLMTWLHDRIWPYESNMTEE--DSYISTLLCGIELIHSGVTCFAEAG--GQHVSEMAKAVELLGL 162 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~GvTt~~~~~--~~~~~~~~~~~~~~g~ 162 (400)
....+|..... +........ ..+..+.....++++.|+|++.+.. +.......+.....++
T Consensus 73 ~~pE~~~~~~~-~~~~~~r~Gtt~~lPTt~tt~y~ya~mGyTt~~eaa~~p~~arh~h~e~~~~p~ 137 (556)
T TIGR03121 73 LRPEDHRRDPE-PRTGLTRAGSGFSVPSTYATGYRYARMGYTTVFEAAVPPLNARHTHEEFADTPI 137 (556)
T ss_pred cCHHHHhhcch-hhhhhcCCCcceEehhHhHHHHHHHhCCccEEecCCCCccchhhhHHHhccCcc
Confidence 11222221100 000111111 1233444456889999999999954 4444445555555444
No 95
>cd01317 DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth.
Probab=99.87 E-value=8.2e-21 Score=175.42 Aligned_cols=152 Identities=14% Similarity=0.160 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEE
Q 015784 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (400)
Q Consensus 223 e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~ 302 (400)
+.+..+++++++.+++++++...+....+ .+....+.|+.....++.|..+++++++.. .+..+.+
T Consensus 172 ~~v~~~~~la~~~~~~i~i~h~ss~~~l~-----------~i~~~~~~G~~~~~e~~~h~L~ld~~~~~~---~~~~~k~ 237 (374)
T cd01317 172 IMVARDLELAEATGARVHFQHLSTARSLE-----------LIRKAKAKGLPVTAEVTPHHLLLDDEALES---YDTNAKV 237 (374)
T ss_pred HHHHHHHHHHHHhCCcEEEEeCCCHHHHH-----------HHHHHHHCCCCEEEEecHHHHhcCHHHHhc---cCCceEE
Confidence 35778888999999998885555554333 222233445444445666888888877643 4666677
Q ss_pred Cccccccc-cCcccHHHHHHcCCcEEEcCCCCCCCCCCC---HHH--------HHHHHHHHhcccccccCCCCCCCCCCH
Q 015784 303 CPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMS---IVD--------EMYLASLINKGREVFANGTTDPAALPA 370 (400)
Q Consensus 303 ~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~---~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (400)
+|. ++. .+..++.+++++|+.+++|||+.+.+.... ++. ++.+...+.... ....+++
T Consensus 238 ~Pp--lr~~~~~~~l~~~~~~G~i~~igsDh~p~~~~~k~~~~~~~~~Gi~g~e~~l~~~~~~~~--------~~~~~~~ 307 (374)
T cd01317 238 NPP--LRSEEDREALIEALKDGTIDAIASDHAPHTDEEKDLPFAEAPPGIIGLETALPLLWTLLV--------KGGLLTL 307 (374)
T ss_pred cCC--CCCHHHHHHHHHHHhcCCceEEEcCCCCCCHHHccCCHhhCCCcHhHHHHHHHHHHHHHH--------HcCCCCH
Confidence 775 233 467789999999999999999987643221 111 333333332211 2335899
Q ss_pred HHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 371 ETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 371 ~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+++++++|.|||+++|+. + |+|++|++|
T Consensus 308 ~~~~~~~t~npA~~lgl~-~-G~l~~G~~A 335 (374)
T cd01317 308 PDLIRALSTNPAKILGLP-P-GRLEVGAPA 335 (374)
T ss_pred HHHHHHHHHHHHHHhCCC-C-CcccCCCcC
Confidence 999999999999999997 3 999999987
No 96
>cd01304 FMDH_A Formylmethanofuran dehydrogenase (FMDH) subunit A; Methanogenic bacteria and archea derive the energy for autotrophic growth from methanogenesis, the reduction of CO2 with molecular hydrogen as the electron donor. FMDH catalyzes the first step in methanogenesis, the formyl-methanofuran synthesis. In this step, CO2 is bound to methanofuran and subsequently reduced to the formyl state with electrons derived from hydrogen.
Probab=99.86 E-value=8.2e-20 Score=169.30 Aligned_cols=127 Identities=14% Similarity=0.129 Sum_probs=74.0
Q ss_pred EEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccc---ccccC
Q 015784 23 LHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA---KGIAD 99 (400)
Q Consensus 23 i~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~---~~~~~ 99 (400)
|+|++|+++... ...++++|+|+||+|++|++.. .+.++||++|++|+|||||+|+|+..... |.+.+
T Consensus 1 Ikng~V~d~~~~-~~~~~~dI~IedGkIv~Vg~~~--------~~~~vID~~G~~VmPGfID~HtH~~gg~~~~~r~~~p 71 (541)
T cd01304 1 IKNGTVYDPLNG-INGEKMDIFIRDGKIVESSSGA--------KPAKVIDASGKVVMAGGVDMHSHIAGGKVNVGRILRP 71 (541)
T ss_pred CEEEEEEcCCCc-ccccccEEEEECCEEEEEccCC--------CCCeEEECCCCEEECCeeeeeeCccccccccccccCh
Confidence 689999976432 2246789999999999998642 13589999999999999999999975321 11111
Q ss_pred CCChhHhhhh-ccccccCCCChhhHHHHHHHHHHHHHhcCcceeecc--CcCCHHHHHHHHHHcCC
Q 015784 100 DVDLMTWLHD-RIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA--GGQHVSEMAKAVELLGL 162 (400)
Q Consensus 100 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~--~~~~~~~~~~~~~~~g~ 162 (400)
.......... ...+....++.. ++...-..+.+.|+|++.+. .+.......+.....++
T Consensus 72 e~~~~~~~~~~~~~~~~~g~~~p----st~~tgy~ya~mGytt~~e~a~~p~~a~h~h~e~~~~p~ 133 (541)
T cd01304 72 EDHRRDPVPKGALRRAGVGFSVP----STLATGYRYAEMGYTTAFEAAMPPLNARHTHEEMADTPI 133 (541)
T ss_pred hhhhccccccccccccCCCccCC----CchHhhhHHHhcCcceeecccCCcccchhhhHHhccCcc
Confidence 1111000000 000001111111 11122266888999999984 34445555555555444
No 97
>cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others.
Probab=99.85 E-value=1.7e-19 Score=160.46 Aligned_cols=259 Identities=25% Similarity=0.353 Sum_probs=177.3
Q ss_pred ccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC--------CHHHH
Q 015784 82 FVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEM 153 (400)
Q Consensus 82 ~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~--------~~~~~ 153 (400)
|||+|+|+.....++......+.. ....+.++.+......+.++++.|||++.++... ..+..
T Consensus 1 ~ID~H~H~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~Gvttv~~~~~~~~~~~~~~~~~~~ 71 (275)
T cd01292 1 FIDTHVHLDGSALRGTRLNLELKE---------AEELSPEDLYEDTLRALEALLAGGVTTVVDMGSTPPPTTTKAAIEAV 71 (275)
T ss_pred CcccchhhHHHHHccCCCcccccc---------ccccCHHHHHHHHHHHHHHHHhcCceEEEeeEeecCccccchHHHHH
Confidence 799999998866555432221111 3556677777777888899999999999996532 24566
Q ss_pred HHHHHHc-CCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeecccccc---CCHHHHHHHH
Q 015784 154 AKAVELL-GLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMN---ATDRLLLETR 229 (400)
Q Consensus 154 ~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~e~l~~~~ 229 (400)
.+.+... +++............. . .........+.+..+... +... +..+.... .+++.+..++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~i~~~~~~--~~~g--i~~~~~~~~~~~~~~~~~~~~ 139 (275)
T cd01292 72 AEAARASAGIRVVLGLGIPGVPAA----V----DEDAEALLLELLRRGLEL--GAVG--LKLAGPYTATGLSDESLRRVL 139 (275)
T ss_pred HHHHHHhcCeeeEEeccCCCCccc----c----chhHHHHHHHHHHHHHhc--CCee--EeeCCCCCCCCCCcHHHHHHH
Confidence 7777777 7777665544332110 0 112222333334333221 1222 22332322 3788999999
Q ss_pred HHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECcccccc
Q 015784 230 DMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMR 309 (400)
Q Consensus 230 ~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~ 309 (400)
+.++++++++.+|+.+.... ...+..+......+.+.++.|+...++++++++++.|+.+++||.++..
T Consensus 140 ~~a~~~~~~i~~H~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 208 (275)
T cd01292 140 EEARKLGLPVVIHAGELPDP-----------TRALEDLVALLRLGGRVVIGHVSHLDPELLELLKEAGVSLEVCPLSNYL 208 (275)
T ss_pred HHHHHcCCeEEEeeCCcccC-----------ccCHHHHHHHHhcCCCEEEECCccCCHHHHHHHHHcCCeEEECCccccc
Confidence 99999999999999877642 0122222222222567899999999999999999999999999998765
Q ss_pred c----cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHH
Q 015784 310 M----LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKS 384 (400)
Q Consensus 310 ~----~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~ 384 (400)
. ....+++++++.|+++++|||++..+...+++.+++.+....+ .+++.+++++++|.|||++
T Consensus 209 ~~~~~~~~~~~~~~~~~g~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~t~n~a~~ 275 (275)
T cd01292 209 LGRDGEGAEALRRLLELGIRVTLGTDGPPHPLGTDLLALLRLLLKVLR------------LGLSLEEALRLATINPARA 275 (275)
T ss_pred ccCCcCCcccHHHHHHCCCcEEEecCCCCCCCCCCHHHHHHHHHHHHh------------cCCCHHHHHHHHhccccCC
Confidence 3 4567899999999999999999865445678888888765542 1279999999999999974
No 98
>PRK01211 dihydroorotase; Provisional
Probab=99.85 E-value=3.4e-19 Score=164.58 Aligned_cols=287 Identities=14% Similarity=0.115 Sum_probs=148.2
Q ss_pred eceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCCCChhHhhhhccccccCCC
Q 015784 39 RNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNM 118 (400)
Q Consensus 39 ~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (400)
..++|+|+||+|++|++... +.++||++| +|+|||||+|+|+... ...
T Consensus 14 ~~~di~I~dGkI~~i~~~~~--------~~~~ida~g-~vlPG~ID~HvH~r~p-----------------------g~~ 61 (409)
T PRK01211 14 DYLEIEVEDGKIKSIKKDAG--------NIGKKELKG-AILPAATDIHVHFRTP-----------------------GET 61 (409)
T ss_pred EEEEEEEECCEEEEecCCCC--------CceEEEecc-EEcCCeEEeeeccCCC-----------------------CCc
Confidence 55799999999999986431 357899999 9999999999999651 111
Q ss_pred ChhhHHHHHHHHHHHHHhcCcceeeccCcC-----CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHH
Q 015784 119 TEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQ 193 (400)
Q Consensus 119 ~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
..+++...+ ++++++|||++.+|... ..+......+...-....-...+... . ... .
T Consensus 62 ~ked~~s~s----~AAaaGGvTtv~dmPnt~P~~~~~e~~~~~~~~a~~~s~vd~~~~~~~---~-------~~~--~-- 123 (409)
T PRK01211 62 EKEDFSTGT----LSAIFGGTTFIMDMPNNNIPIKDYNAFSDKLGRVAPKAYVDFSLYSME---T-------GNN--A-- 123 (409)
T ss_pred ccCcHHHHH----HHHHcCCcEEEEECCCCCCCCChHHHHHHHHHHhccCceeeEEEEecc---C-------Cch--h--
Confidence 233433333 67899999999998632 12222222212111111111111000 0 000 0
Q ss_pred HHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhH-----HhhhcCCCCCh-HHH-
Q 015784 194 KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV-----VMDTRKVDHGT-VTF- 266 (400)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~-----~~~~~~~~~~~-~~~- 266 (400)
+ +.. .+...+++++.... .........+.++.+.+.|.++.+|+.+....... ....+...+-. .|.
T Consensus 124 -~-~~~---~g~~~~k~f~~~~~-~~~~~~~~~~~l~~~~~~g~~v~~H~E~~~l~~~~~~~~~~~~~~~~~rP~~aE~~ 197 (409)
T PRK01211 124 -L-ILD---ERSIGLKVYMGGTT-NTNGTDIEGGEIKKINEANIPVFFHAELSECLRKHQFESKNLRDHDLARPIECEIK 197 (409)
T ss_pred -h-HHh---ccCcEEEEEcCCCc-CCCccccCHHHHHHHHccCCEEEEeccChHHhhhhhhCcchHhhCCCCCCHHHHHH
Confidence 1 111 12223444332110 00000112234466678899999999654321110 00111111101 111
Q ss_pred --HhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccc-----------------cc-cCcccHHHHHHcCCcE
Q 015784 267 --LDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAM-----------------RM-LGFAPIKEMLHADICV 326 (400)
Q Consensus 267 --l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~-----------------~~-~~~~~~~~~~~~Gv~v 326 (400)
.....+...+..+.|... .+.+ ..+.+.+||...+ |. .....+.+.+..|...
T Consensus 198 ai~~~~~la~~~~hi~HvSt--~~~~-----~~vt~Ev~phhL~l~~~~~~~~~~kvnPPLRs~~d~~aL~~~l~dG~ID 270 (409)
T PRK01211 198 AVKYVKNLDLKTKIIAHVSS--IDVI-----GRFLREVTPHHLLLNDDMPLGSYGKVNPPLRDRWTQERLLEEYISGRFD 270 (409)
T ss_pred HHHHHHHHhCCCcEEEEecC--hhhc-----CceEEEecHHHHccccccccCCceeEcCCCCCHHHHHHHHHHHhCCCCC
Confidence 111111112333344333 2222 2566777776422 00 1122345567789999
Q ss_pred EEcCCCCCCCC-----------CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccc
Q 015784 327 SLGTDGAPSNN-----------RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLE 395 (400)
Q Consensus 327 ~~gtD~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~ 395 (400)
+++|||.|... +..-++. .+...+. .....++|++++++++|.|||++||+. .|+|+
T Consensus 271 ~i~SDHaP~~~~eK~~~~~a~~G~~gle~-~lpl~~~---------~v~~~~isl~~~v~~~s~nPAki~gl~--kG~l~ 338 (409)
T PRK01211 271 ILSSDHAPHTEEDKQEFEYAKSGIIGVET-RVPLFLA---------LVKKKILPLDVLYKTAIERPASLFGIK--KGKIE 338 (409)
T ss_pred EEeCCCCCCChhHhCCHhhCCCCCCcHHH-HHHHHHH---------HHHcCCCCHHHHHHHHHHHHHHHhCCC--CCccc
Confidence 99999986411 1111111 1111111 012446999999999999999999994 49999
Q ss_pred cCcCC
Q 015784 396 AGKKV 400 (400)
Q Consensus 396 ~G~~A 400 (400)
+|++|
T Consensus 339 ~G~~A 343 (409)
T PRK01211 339 EGYDA 343 (409)
T ss_pred CCCcC
Confidence 99987
No 99
>PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ]. Also included in this superfamily are the phopshotriesterase enzymes, which hydrolyse P-O bonds. Members participate in a large number of processes including nucleotide metabolism, detoxification and neuronal development. They use a variety of divalent metal cofactors for catalysis: for example adenosine deaminase binds a single zinc ion, phopsphotriesterase binds two, while urease binds nickel. It has been postulated that since some of these proteins, such as those some of those involved in neuronal devlopment, appear to have lost their metal-binding centres, their function may simply be to bind, but not hydrolyse, their target molecules. This entry represents a subset of amidohydrolase domains that participate in different functions including cytosine degradation, atrazine degradation and other metabolic processes. The structure of the domain from Escherichia coli has been studied, and like other amidohydrolases it forms a classical alpha-beta TIM-barrel fold []. The active site is located in the mouth of the enzyme barrel and contains a bound iron ion that coordinates a hydroxyl nucleophile. Substrate binding involves a significant conformational change that sequesters the reaction complex from solvent.; PDB: 4F0R_A 4F0S_A 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A ....
Probab=99.84 E-value=7.1e-20 Score=172.08 Aligned_cols=170 Identities=22% Similarity=0.192 Sum_probs=120.8
Q ss_pred cccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHH
Q 015784 215 RQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLS 294 (400)
Q Consensus 215 ~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~ 294 (400)
+.....+++.+.++++.+.+.|+++.+|+.++..... .++.+...... ..++|+..++++++++++
T Consensus 217 ~g~~~~~~~~l~~~v~~a~~~g~~v~vHa~gd~a~~~-----------~l~a~~~~~~~---~~i~h~~~~~~~~~~~~~ 282 (404)
T PF07969_consen 217 SGLPSFDPEELEELVRAAREAGLQVAVHAIGDRAIDE-----------ALDAIEAARAR---GRIEHAELIDPDDIERMA 282 (404)
T ss_dssp TC--SSSHHHHHHHHHHHHHCT-EEEEEEESHHHHHH-----------HHHHHHHHTCC---HEEEEHCBCCHHHHHHHH
T ss_pred cccccccchhHHHHHHHHHhcCCeeEEEEcCCchHHh-----------HHHHHHhhccc---ceeeccccCCHHHHHHHH
Confidence 3445667777999999999999999999966554322 22233333221 278999999999999999
Q ss_pred hcCCeEEECccc--------c------ccccCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccC
Q 015784 295 RAGVKVSHCPAS--------A------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFAN 360 (400)
Q Consensus 295 ~~~~~~~~~p~~--------~------~~~~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (400)
+.++.+.++|.. . .+.....|++.++++|+++++|||++.. ..+++..+..+............
T Consensus 283 ~l~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~gsD~p~~--~~~P~~~~~~~~~~~~~~~~~~~ 360 (404)
T PF07969_consen 283 ELGVTASVQPHFLFSWGGEWYEERLGPERARRIYPIRSLLDAGVRVALGSDAPVS--PPNPFRGIWAAVTRQMAGERSGP 360 (404)
T ss_dssp HHTTEEEECCTHHHHETEETHHHHHHHHCGGGBTHHHHHHHCTTEEEE--TTTTS--SCCHHHHHHHHHHHHHCHHTHHH
T ss_pred HhCCccccChhHhhhccchhhhhhhhhHHHHHHhHHHHHHhccCceecCcCCccc--ccCcchhhhhhhccccccccccc
Confidence 999999999921 0 0123457899999999999999998853 35677667666544432211111
Q ss_pred CCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 361 GTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 361 ~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....++.+|++|||+++|.|||+++|+++++|+|++||.|
T Consensus 361 ~~~~~~~ls~~eAl~~~T~~~A~~~g~~~~~Gsl~~Gk~A 400 (404)
T PF07969_consen 361 VLGPEQRLSLEEALRAYTSNPARALGLEDRKGSLEPGKLA 400 (404)
T ss_dssp CCGGTGSSHHHHHHHHTTHHHHHHTT-TTTSSSSSTTSBS
T ss_pred cccccccCCHHHHHHHHhHHHHHHcCCCCCcceECCCCCc
Confidence 1112356999999999999999999999999999999987
No 100
>PRK04250 dihydroorotase; Provisional
Probab=99.84 E-value=8.6e-19 Score=162.08 Aligned_cols=85 Identities=21% Similarity=0.383 Sum_probs=60.0
Q ss_pred ecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCCCChh
Q 015784 25 NAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLM 104 (400)
Q Consensus 25 n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~ 104 (400)
+++|++.+ .+ .+++|+|+||+|++|++.. . .+.++||++|++|+|||||+|+|+...
T Consensus 3 ~~~v~~~~---~~-~~~~i~i~~G~I~~i~~~~-~------~~~~~iD~~g~~v~PG~ID~HvH~~~~------------ 59 (398)
T PRK04250 3 EGKFLLKG---RI-VEGGIGIENGRISKISLRD-L------KGKEVIKVKGGIILPGLIDVHVHLRDF------------ 59 (398)
T ss_pred eEEEEECC---cE-EEEEEEEECCEEEEeeCCC-C------CCCeEEECCCCEEccCEEeccccccCC------------
Confidence 56778643 23 3689999999999997411 1 245899999999999999999998320
Q ss_pred HhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc
Q 015784 105 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG 147 (400)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~ 147 (400)
.....++. ....+.++++|+|++.+++.
T Consensus 60 -----------~~~~~e~~----~~~~~aa~~gGvTtv~~~p~ 87 (398)
T PRK04250 60 -----------EESYKETI----ESGTKAALHGGITLVFDMPN 87 (398)
T ss_pred -----------CCCcHHHH----HHHHHHHHhCCeEEEEECCC
Confidence 01111221 22346799999999999863
No 101
>cd01320 ADA Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively. ADA plays an important role in the purine pathway. Low, as well as high levels of ADA activity have been linked to several diseases.
Probab=99.83 E-value=4e-18 Score=154.88 Aligned_cols=247 Identities=18% Similarity=0.159 Sum_probs=169.2
Q ss_pred cCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeec-cCcC-------C--------HHHHHHHHHHcC
Q 015784 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAE-AGGQ-------H--------VSEMAKAVELLG 161 (400)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~-~~~~-------~--------~~~~~~~~~~~g 161 (400)
..+.++.+|+....|+.....++++.+..++..+.++++.|||++-. ..+. . .+...+..++.|
T Consensus 46 ~~~~~l~~~l~~~~~~~~~~~~~ed~~~~~~~~~~e~~~~Gvt~~E~~~~p~~~~~~~~~~~~~~~~~~~ai~~~~~~~g 125 (325)
T cd01320 46 YNFSDLQDFLAKYDFGLSVLQTEEDFERLAYEYLEDAAADGVVYAEIRFSPQLHTRRGLSFDEVVEAVLRGLDEAEAEFG 125 (325)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCEEEEEEeCchhhccCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 35567788988887777777889999999999999999999996532 1110 0 223345556668
Q ss_pred CeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeE
Q 015784 162 LRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHM 241 (400)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~ 241 (400)
++..+........ +........+...++.. +..+.+.+.... ...+.+.+..+++.|++.|+++.+
T Consensus 126 i~~~l~~~~~~~~-----------~~~~~~~~~~~~~~~~~--~~vvg~~l~~~~-~~~~~~~~~~~~~~A~~~g~~v~~ 191 (325)
T cd01320 126 IKARLILCGLRHL-----------SPESAQETLELALKYRD--KGVVGFDLAGDE-VGFPPEKFVRAFQRAREAGLRLTA 191 (325)
T ss_pred CeEEEEEEecCCC-----------CHHHHHHHHHHHHhccC--CCEEEeecCCCC-CCCCHHHHHHHHHHHHHCCCceEE
Confidence 8876654433211 11223333333333322 123333222222 234778999999999999999999
Q ss_pred ecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC--hhHHHHHHhcCCeEEECccccccc-cC----cc
Q 015784 242 HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRM-LG----FA 314 (400)
Q Consensus 242 H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~--~~~i~~~~~~~~~~~~~p~~~~~~-~~----~~ 314 (400)
|+.|+..... ..+.+...+. ..+.|+.+++ +++++++++.|+.+++||.+|+.+ .. ..
T Consensus 192 H~~E~~~~~~-----------~~~a~~~~g~----~~i~H~~~l~~~~~~~~~l~~~gi~v~~~P~sn~~l~~~~~~~~~ 256 (325)
T cd01320 192 HAGEAGGPES-----------VRDALDLLGA----ERIGHGIRAIEDPELVKRLAERNIPLEVCPTSNVQTGAVKSLAEH 256 (325)
T ss_pred eCCCCCCHHH-----------HHHHHHHcCC----cccchhhccCccHHHHHHHHHcCCeEEECCCccccccccCCcccC
Confidence 9998743211 1122232332 2478999984 668999999999999999999876 22 57
Q ss_pred cHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 315 PIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 315 ~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
|++.|+++||++++|||+++. .+.+++.+++.+.... +++++| |..+|.|+++...+.+
T Consensus 257 p~~~l~~~Gv~v~lgTD~~~~-~~~~~~~e~~~~~~~~--------------~l~~~e-l~~~~~na~~~~f~~~ 315 (325)
T cd01320 257 PLRELLDAGVKVTINTDDPTV-FGTYLTDEYELLAEAF--------------GLTEEE-LKKLARNAVEASFLSE 315 (325)
T ss_pred hHHHHHHCCCEEEECCCCCcc-cCCCHHHHHHHHHHHc--------------CCCHHH-HHHHHHHHHHHhCCCH
Confidence 999999999999999998765 3467899998876432 489999 5668899999887653
No 102
>PRK09358 adenosine deaminase; Provisional
Probab=99.82 E-value=6.8e-18 Score=154.09 Aligned_cols=248 Identities=17% Similarity=0.140 Sum_probs=171.4
Q ss_pred cccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceee---ccCc-----C--------CHHHHHHHHHH
Q 015784 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFA---EAGG-----Q--------HVSEMAKAVEL 159 (400)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~---~~~~-----~--------~~~~~~~~~~~ 159 (400)
+...+.++.+|+..+.|+.....++++.+..++..+.++++.|||++- +... . ..+...++..+
T Consensus 52 ~~~~~~~l~~~l~~~~~~~~~~~t~ed~~~~~~~~~~e~~~~Gvty~E~~~~p~~~~~~gl~~~~~~~a~~~~~~~a~~~ 131 (340)
T PRK09358 52 AAYDFRDLQSFLDKYDAGVAVLQTEEDLRRLAFEYLEDAAADGVVYAEIRFDPQLHTERGLPLEEVVEAVLDGLRAAEAE 131 (340)
T ss_pred ccccCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCEEEEEEeChhhhhhcCCCHHHHHHHHHHHHHHHHHh
Confidence 344556788999988888777889999999999999999999999753 2210 0 02233455566
Q ss_pred cCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccc-cccCCHHHHHHHHHHHHHcCCe
Q 015784 160 LGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ-IMNATDRLLLETRDMAREFKTG 238 (400)
Q Consensus 160 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~l~~~~~~a~~~~~~ 238 (400)
.|++..+........ + .........+.++.+. ....+.+ ++.+ ....+++.+..+++.|++.|++
T Consensus 132 ~gi~~~li~~~~r~~---~-------~~~~~~~~~~~~~~~~--~~~vvg~--~l~g~e~~~~~~~~~~~~~~A~~~g~~ 197 (340)
T PRK09358 132 FGISVRLILCFMRHF---G-------EEAAARELEALAARYR--DDGVVGF--DLAGDELGFPPSKFARAFDRARDAGLR 197 (340)
T ss_pred cCceEEEEEEecCCC---C-------HHHHHHHHHHHHHHhc--CCcEEEE--eCCCcCCCCCHHHHHHHHHHHHHCCCC
Confidence 788887765544321 1 1122223333333322 1223332 3322 2345778899999999999999
Q ss_pred eeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC--hhHHHHHHhcCCeEEECccccccc-c----
Q 015784 239 IHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRM-L---- 311 (400)
Q Consensus 239 v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~--~~~i~~~~~~~~~~~~~p~~~~~~-~---- 311 (400)
+++|+.|...... ..+.+...|. ..+.|+.+++ +++++++++.|+.+++||.||+.+ .
T Consensus 198 ~~~H~~E~~~~~~-----------~~~al~~lg~----~ri~Hg~~l~~~~~~~~~l~~~gi~v~~cP~Sn~~l~~~~~~ 262 (340)
T PRK09358 198 LTAHAGEAGGPES-----------IWEALDELGA----ERIGHGVRAIEDPALMARLADRRIPLEVCPTSNVQTGAVPSL 262 (340)
T ss_pred eEEcCCCCCchhH-----------HHHHHHHcCC----cccchhhhhccCHHHHHHHHHcCCeEEECCCccccccccCCc
Confidence 9999998653211 1122232332 2368999985 567999999999999999999876 3
Q ss_pred CcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 015784 312 GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (400)
Q Consensus 312 ~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~ 388 (400)
+..|+++|+++||+|++|||++.. .+.+++++++.+.... +++++++ ..++.|+.+...++
T Consensus 263 ~~~pi~~l~~~Gv~v~lgTD~~~~-~~~~l~~e~~~~~~~~--------------~l~~~el-~~l~~nai~~sf~~ 323 (340)
T PRK09358 263 AEHPLKTLLDAGVRVTINTDDPLV-FGTTLTEEYEALAEAF--------------GLSDEDL-AQLARNALEAAFLS 323 (340)
T ss_pred ccChHHHHHHCCCEEEECCCCCcc-cCCCHHHHHHHHHHHh--------------CCCHHHH-HHHHHHHHHHHCCC
Confidence 568999999999999999999865 3468999999877432 4899994 66678888776554
No 103
>cd01295 AdeC Adenine deaminase (AdeC) directly deaminates adenine to form hypoxanthine. This reaction is part of one of the adenine salvage pathways, as well as the degradation pathway. It is important for adenine utilization as a purine, as well as a nitrogen source in bacteria and archea.
Probab=99.82 E-value=2.9e-18 Score=160.69 Aligned_cols=253 Identities=17% Similarity=0.213 Sum_probs=142.2
Q ss_pred eCCCcEeeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC-----
Q 015784 72 DLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG----- 146 (400)
Q Consensus 72 D~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~----- 146 (400)
|++|++|+|||||+|+|+.. ..++..+ ..+.++.+|||++.+.+
T Consensus 1 Da~G~~v~PG~ID~H~Hi~~------------------------~~~~~~~-------~~~~a~~~GvTtvv~~p~~~~~ 49 (422)
T cd01295 1 DAEGKYIVPGFIDAHLHIES------------------------SMLTPSE-------FAKAVLPHGTTTVIADPHEIAN 49 (422)
T ss_pred CCCCCEEccCEEEccCCcCC------------------------CCCChHH-------HHHHHHCCCcEEEEeCCCCCCc
Confidence 78999999999999999965 1122222 13568899999999853
Q ss_pred ---cCCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHH
Q 015784 147 ---GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDR 223 (400)
Q Consensus 147 ---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 223 (400)
....+.+.+.+++..++.+..... ..+..+.+ .........+..++++. ..--.++-.+..... ..+++
T Consensus 50 v~g~~~~~~~~~~a~~~p~~~~~~~p~--~vp~t~~e--~~g~~~~~~~i~~l~~~---~~vvglgE~md~~~v-~~~~~ 121 (422)
T cd01295 50 VAGVDGIEFMLEDAKKTPLDIFWMLPS--CVPATPFE--TSGAELTAEDIKELLEH---PEVVGLGEVMDFPGV-IEGDD 121 (422)
T ss_pred CCCHHHHHHHHHHHhCCCceEEEeCCC--cCCCCCCC--CCCCcCCHHHHHHHhcC---CCCcEEEEeccCccc-cCCcH
Confidence 122344455555555544332210 00000100 00011112333333221 111112222222111 23556
Q ss_pred HHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEEC
Q 015784 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHC 303 (400)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~ 303 (400)
.+.+.++.+++.|+++.+|+...... .+..+...+.. ..|+....++.++++ +.|+.+.++
T Consensus 122 ~l~~~i~~A~~~g~~v~~Ha~g~~~~-------------~L~a~l~aGi~-----~dH~~~~~eea~e~l-~~G~~i~i~ 182 (422)
T cd01295 122 EMLAKIQAAKKAGKPVDGHAPGLSGE-------------ELNAYMAAGIS-----TDHEAMTGEEALEKL-RLGMYVMLR 182 (422)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCCCHH-------------HHHHHHHcCCC-----CCcCCCcHHHHHHHH-HCCCEEEEE
Confidence 78889999999999999999765521 11111122321 247777555555555 789998887
Q ss_pred ccccccccCcccHHHHHH--cCCcEEEcCCCCCCCCC---CCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHh
Q 015784 304 PASAMRMLGFAPIKEMLH--ADICVSLGTDGAPSNNR---MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMAT 378 (400)
Q Consensus 304 p~~~~~~~~~~~~~~~~~--~Gv~v~~gtD~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T 378 (400)
+.+... ....+.+.+. .+.+++++||.+..++. ..+...++.+. ..+++++++++++|
T Consensus 183 ~g~~~~--~~~~~~~~l~~~~~~~i~l~TD~~~~~~~~~~g~~~~v~r~a~---------------~~g~s~~eal~~aT 245 (422)
T cd01295 183 EGSIAK--NLEALLPAITEKNFRRFMFCTDDVHPDDLLSEGHLDYIVRRAI---------------EAGIPPEDAIQMAT 245 (422)
T ss_pred CcccHh--hHHHHHHhhhhccCCeEEEEcCCCCchhhhhcchHHHHHHHHH---------------HcCCCHHHHHHHHh
Confidence 654311 0111111122 47899999998633111 11112222211 23589999999999
Q ss_pred HHHHHHcCCCCCccccccCcCC
Q 015784 379 INGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 379 ~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.|||+++|+ +++|+|++|+.|
T Consensus 246 ~n~A~~~gl-~~~G~i~~G~~A 266 (422)
T cd01295 246 INPAECYGL-HDLGAIAPGRIA 266 (422)
T ss_pred HHHHHHcCC-CCCcccCCCCcC
Confidence 999999999 557999999987
No 104
>PRK00369 pyrC dihydroorotase; Provisional
Probab=99.81 E-value=6.8e-18 Score=155.10 Aligned_cols=281 Identities=16% Similarity=0.124 Sum_probs=148.5
Q ss_pred eceeEEEeCCEEEEecCChhhhhhhccCCCcEEeC-CCcEeeecccccCcCCcccccccccCCCChhHhhhhccccccCC
Q 015784 39 RNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDL-QSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESN 117 (400)
Q Consensus 39 ~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~-~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (400)
.+..|.+++|+|..|++... .+.++||+ +|++|+|||||+|+|+... ..
T Consensus 12 ~~~~~~~~~~~~~~i~~~~~-------~~~~~id~~~G~~vlPG~ID~HvH~r~p-----------------------g~ 61 (392)
T PRK00369 12 GKEIKEICINFDRRIKEIKS-------RCKPDLDLPQGTLILPGAIDLHVHLRGL-----------------------KL 61 (392)
T ss_pred CCceEEEeeeeeeeEeeccC-------CCCceeecCCCCEEeCCEEEcccccCCC-----------------------CC
Confidence 45578999999999887521 25789999 6999999999999999541 11
Q ss_pred CChhhHHHHHHHHHHHHHhcCcceeeccCcCC-----HHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHH
Q 015784 118 MTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQS 192 (400)
Q Consensus 118 ~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (400)
...+++...+ ++++++|+|++.+|.... .+..........-....-...+. + .. .. ..
T Consensus 62 ~~~ed~~sgs----~AAa~GGvTtv~~mPnt~P~~~~~~~l~~~~~~a~~~~~vd~~~~~-~--~~------~~---~~- 124 (392)
T PRK00369 62 SYKEDVASGT----SEAAYGGVTLVADMPNTIPPLNTPEAITEKLAELEYYSRVDYFVYS-G--VT------KD---PE- 124 (392)
T ss_pred cccccHHHHH----HHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhCcCCeEEEEEEe-e--cc------CC---HH-
Confidence 1223333333 678999999999986322 22222222221111111111110 1 00 00 11
Q ss_pred HHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCCh-HH--HHhH
Q 015784 193 QKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGT-VT--FLDK 269 (400)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~-~~--~l~~ 269 (400)
+ +..+ ....++.+. .. .... .+++.+.+.+.++.+|+.+... .... .+..+.. .| .+..
T Consensus 125 --e-l~~~---~~~g~k~f~---~~-~~~~----~~~~~~~~~~~~v~~HaE~~~l-~~~~---~~~~rp~~aE~~ai~~ 186 (392)
T PRK00369 125 --K-VDKL---PIAGYKIFP---ED-LERE----ETFRVLLKSRKLKILHPEVPLA-LKSN---RKLRRNCWYEIAALYY 186 (392)
T ss_pred --H-HHHh---hCceEEEEC---CC-CchH----HHHHHHHHhCCEEEEeCCCHHH-hhcc---hhcccCHHHHHHHHHH
Confidence 1 1111 112234331 11 1122 2334445556899999965332 1100 1111101 11 1122
Q ss_pred hCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-------cCcccH---------HHHHHcCCcEEEcCCCC
Q 015784 270 IEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-------LGFAPI---------KEMLHADICVSLGTDGA 333 (400)
Q Consensus 270 ~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-------~~~~~~---------~~~~~~Gv~v~~gtD~~ 333 (400)
...+ .+..+.|... .+.++.+++.|+.+.+||...+-- .-.+|+ .+.+.. ..+++|||.
T Consensus 187 ~~~~-~~lhi~HvSt--~~~v~~ak~~gvt~Ev~pHhL~l~~~~~~~~k~~PPLR~~~dr~aL~~~l~~--id~i~SDHa 261 (392)
T PRK00369 187 VKDY-QNVHITHASN--PRTVRLAKELGFTVDITPHHLLVNGEKDCLTKVNPPIRDINERLWLLQALSE--VDAIASDHA 261 (392)
T ss_pred HHHh-CCEEEEECCC--HHHHHHHHHCCCeEEechhHheeccCCCCceEEeCCCCCHHHHHHHHHHHHh--CCEEEeCCC
Confidence 2222 3444444443 456777888899999999853311 001222 333444 779999998
Q ss_pred CCCCC---CCHHH--------HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 334 PSNNR---MSIVD--------EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 334 ~~~~~---~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
|.... .+++. +......+.. ....+++++++++++|.|||+++|+.. |.|++|+.|
T Consensus 262 P~~~~~K~~~f~~~~~Gi~GlE~~lpll~~~---------v~~~~lsl~~~v~~~s~nPA~ilgl~~--g~i~~G~~A 328 (392)
T PRK00369 262 PHSSFEKLQPYEVCPPGIAALSFTPPFIYTL---------VSKGILSIDRAVELISTNPARILGIPY--GEIKEGYRA 328 (392)
T ss_pred CCCHHHccCCHhhCCCCCeeHHHHHHHHHHH---------HHcCCCCHHHHHHHHHHHHHHHhCCCC--CccCCCCcc
Confidence 75211 01110 1111111110 123459999999999999999999963 889999986
No 105
>TIGR01430 aden_deam adenosine deaminase. This family includes the experimentally verified adenosine deaminases of mammals and E. coli. Other members of this family are predicted also to be adenosine deaminase, an enzyme of nucleotide degradation. This family is distantly related to AMP deaminase.
Probab=99.81 E-value=1.2e-17 Score=151.46 Aligned_cols=243 Identities=19% Similarity=0.217 Sum_probs=169.9
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC--cC---------------CHHHHHHHHHHcCC
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--GQ---------------HVSEMAKAVELLGL 162 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~--~~---------------~~~~~~~~~~~~g~ 162 (400)
..++.+|+....|+.....+.++.+..++..+.++++.||| +.++. +. ..+.+.+...+.|+
T Consensus 47 ~~~l~~~l~~~~~~~~~~~t~e~l~~~~~~~~~e~~~~Gv~-y~E~r~~p~~~~~~g~~~~~~~~~~~~~i~~a~~~~gi 125 (324)
T TIGR01430 47 FRDLQDFLAKYDFGVEVLRTEDDFKRLAYEYVEKAAKDGVV-YAEVFFDPQLHTNRGISPDTVVEAVLDGLDEAERDFGI 125 (324)
T ss_pred CCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCE-EEEEEeCccccccCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 35677899888888777788889888888899999999995 55431 11 11234455667788
Q ss_pred eEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccc-cccCCHHHHHHHHHHHHHcCCeeeE
Q 015784 163 RACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ-IMNATDRLLLETRDMAREFKTGIHM 241 (400)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~l~~~~~~a~~~~~~v~~ 241 (400)
+..+..+.+... .........+...++.. +..+. ++... ....+++.+..+++.|++.|+++.+
T Consensus 126 ~~~li~~~~r~~-----------~~~~~~~~~~~~~~~~~--~~vvg--~~l~~~e~~~~~~~~~~~~~~A~~~g~~i~~ 190 (324)
T TIGR01430 126 KSRLILCGMRHK-----------QPEAAEETLELAKPYKE--QTIVG--FGLAGDERGGPPPDFVRAFAIARELGLHLTV 190 (324)
T ss_pred eEEEEEEEeCCC-----------CHHHHHHHHHHHHhhcc--CcEEE--ecCCCCCCCCCHHHHHHHHHHHHHCCCCeEE
Confidence 876655554321 11223333333333221 12232 23332 2345688899999999999999999
Q ss_pred ecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC--ChhHHHHHHhcCCeEEECcccccccc---C--cc
Q 015784 242 HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV--NHTEIGLLSRAGVKVSHCPASAMRML---G--FA 314 (400)
Q Consensus 242 H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~--~~~~i~~~~~~~~~~~~~p~~~~~~~---~--~~ 314 (400)
|+.|+..... ....+...|. ..+.|+.++ ++++++.++++|+.+++||.+|+.+. + ..
T Consensus 191 Ha~E~~~~~~-----------~~~~~~~~g~----~ri~Hg~~l~~~~~~i~~l~~~gi~v~~cP~Sn~~l~~~~~~~~~ 255 (324)
T TIGR01430 191 HAGELGGPES-----------VREALDDLGA----TRIGHGVRALEDPELLKRLAQENITLEVCPTSNVALGVVKSLAEH 255 (324)
T ss_pred ecCCCCChHH-----------HHHHHHHcCc----hhcchhhhhccCHHHHHHHHHcCceEEECCcccccccccCCcccC
Confidence 9998732111 1122223333 247899998 56789999999999999999998752 3 67
Q ss_pred cHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 315 PIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 315 ~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
|+++|+++|++|++|||++..+. .++++++..+.... +++++| |+++|.|+++.+.+++
T Consensus 256 pi~~l~~~Gv~v~igTD~~~~~~-~~l~~e~~~a~~~~--------------~l~~~e-l~~~~~na~~~~f~~~ 314 (324)
T TIGR01430 256 PLRRFLEAGVKVTLNSDDPAYFG-SYLTEEYEIAAKHA--------------GLTEEE-LKQLARNALEGSFLSD 314 (324)
T ss_pred hHHHHHHCCCEEEECCCCCcccC-CCHHHHHHHHHHHc--------------CCCHHH-HHHHHHHHHHHhCCCH
Confidence 99999999999999999986643 48999999887432 499999 8899999999887653
No 106
>COG0804 UreC Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism]
Probab=99.80 E-value=8e-18 Score=145.84 Aligned_cols=316 Identities=19% Similarity=0.223 Sum_probs=185.8
Q ss_pred CCCCCCCCCCC-CCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhh--hh---hccCCCcEEeCCCcEe
Q 015784 5 SSGGGSSSGSL-GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL--QQ---FSQMADQIIDLQSQIL 78 (400)
Q Consensus 5 ~~~~~~~~~~~-~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~--~~---~~~~~~~viD~~g~~v 78 (400)
+.|+++++... ....+++|+|+.|++-. . +-+.+|.|+||||++||+..... .+ .-...+++|.++|++|
T Consensus 52 RdGMgqs~~~~~~~~~D~VITNa~IiD~~---G-i~KADiGikdGrI~~IGKaGNPd~~dgV~iiiG~sTe~iagEg~I~ 127 (568)
T COG0804 52 RDGMGQSQRLTRAGALDLVITNALIIDYW---G-IVKADIGIKDGRIAGIGKAGNPDIMDGVTIIIGPSTEIIAGEGKIV 127 (568)
T ss_pred ccccCcCccccccCcccEEEeeeEEEecc---c-eEEeecccccceEEEeecCCCCCccCCceEEeccccceecCCceEE
Confidence 34555554443 34568999999999753 2 35789999999999999764311 10 1134578999999999
Q ss_pred eecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC------------
Q 015784 79 LPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG------------ 146 (400)
Q Consensus 79 ~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~------------ 146 (400)
.-|-||.|+|+.. + + .++.+|.+|+||+.--+
T Consensus 128 TAGGiDtHiHfI~------------------------P----q--------qi~~Al~sGiTtmiGGGtGpa~Gt~aTT~ 171 (568)
T COG0804 128 TAGGIDTHIHFIC------------------------P----Q--------QIEEALASGITTMIGGGTGPADGTNATTC 171 (568)
T ss_pred eeccccceeEEec------------------------H----H--------HHHHHHhcCcEEEecCccCCCCCcccccc
Confidence 9999999999954 1 0 12558999999998532
Q ss_pred ---cCCHHHHHHHHHHcCCeEEE-ecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCH
Q 015784 147 ---GQHVSEMAKAVELLGLRACL-VQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATD 222 (400)
Q Consensus 147 ---~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (400)
..+...+++++....++.-+ +.+.- . .+ ....+.+ .. +.+. +..|..+..++
T Consensus 172 TpG~w~i~rMl~a~d~~p~N~g~lgKGn~-s-----------~~----~~L~Eqi---~a---Ga~G--lKlHEDWG~Tp 227 (568)
T COG0804 172 TPGPWHIARMLQAADGLPMNIGFLGKGNA-S-----------NP----APLAEQI---EA---GAIG--LKLHEDWGATP 227 (568)
T ss_pred cCCHHHHHHHHHhhhcCceeeEEeecCCC-C-----------Cc----hhHHHHH---hh---ccce--eEeecccCCCH
Confidence 12345667777666655422 21110 0 01 1122222 11 2222 45677788899
Q ss_pred HHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC-------ChhHHHHHHh
Q 015784 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV-------NHTEIGLLSR 295 (400)
Q Consensus 223 e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~-------~~~~i~~~~~ 295 (400)
..+...+..|.+++++|.+|.+. ..+-.++.. .+..+. .| ..|..|. .++-++....
T Consensus 228 aaI~~~L~VAD~~DvqVaiHtDT-LNEsGfvEd----------Ti~A~~---gR--tIHtyHtEGAGGGHAPDiikv~~~ 291 (568)
T COG0804 228 AAIDTCLSVADEYDVQVAIHTDT-LNESGFVED----------TIAAIK---GR--TIHTYHTEGAGGGHAPDIIKVAGQ 291 (568)
T ss_pred HHHHHHHhhhhhhceEEEEeecc-cccccchHh----------HHHHhc---Cc--eeEEeeccCCCCCCccHHHHHccC
Confidence 99999999999999999999753 222111111 011100 01 1122221 1222333322
Q ss_pred cCCeE-EECcc---------------------------------ccccccCcccHHHHHHcCCcEEEcCCCCCCCCCCC-
Q 015784 296 AGVKV-SHCPA---------------------------------SAMRMLGFAPIKEMLHADICVSLGTDGAPSNNRMS- 340 (400)
Q Consensus 296 ~~~~~-~~~p~---------------------------------~~~~~~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~- 340 (400)
.++.. +..|. |-.|.+.++.-.-|++-|+.-.++||+........
T Consensus 292 ~NvLPsSTNPT~PytvNT~~EhlDMlMVcHhL~p~ipeDvaFAeSRIR~eTIAAEdiLhDmGafSmisSDSQAMGRvGEv 371 (568)
T COG0804 292 PNVLPSSTNPTRPYTVNTIDEHLDMLMVCHHLDPRIPEDVAFAESRIRPETIAAEDILHDMGAFSMISSDSQAMGRVGEV 371 (568)
T ss_pred CCcCcCCCCCCCCcccccHHHhhhhhhhhccCCCCCcchhhhhhhccchhhhhHHHHHhhccceEEeccchHhhhccchh
Confidence 33221 11111 11111233344558888999999999875433222
Q ss_pred HHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 341 IVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
..+.++.+-.+.+.+..+.........+-....+..+|.|||..-|+++.+||+|+||.|
T Consensus 372 i~RtwQtA~kmK~qrG~L~~d~~~nDN~RvkRYiaKyTINPAIthGis~~vGSvEvGK~A 431 (568)
T COG0804 372 ITRTWQTADKMKKQRGALPEDAGGNDNFRVKRYIAKYTINPAITHGISHEVGSVEVGKLA 431 (568)
T ss_pred hhhHHHHHHHHHHhcCCCCCCCCCCccHHHhhhhhheecCHHHhcccchhccceecccee
Confidence 334444444333323222222121233567788999999999999999999999999987
No 107
>cd01302 Cyclic_amidohydrolases Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and dihydroorotase, are involved in the metabolism of pyrimidines and purines, sharing the property of hydrolyzing the cyclic amide bond of each substrate to the corresponding N-carbamyl amino acids. Allantoinases catalyze the degradation of purines, while dihydropyrimidinases and hydantoinases, a microbial counterpart of dihydropyrimidinase, are involved in pyrimidine degradation. Dihydroorotase participates in the de novo synthesis of pyrimidines.
Probab=99.79 E-value=2.3e-17 Score=149.95 Aligned_cols=255 Identities=19% Similarity=0.218 Sum_probs=142.3
Q ss_pred cEeeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC-----CH
Q 015784 76 QILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HV 150 (400)
Q Consensus 76 ~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-----~~ 150 (400)
++|+||+||+|+|+.... .....++....+ ++++.+|+|++.+|... ..
T Consensus 1 ~~vlPG~iD~HvH~r~pg----------------------~~~~~e~~~t~t----~aA~~GG~Ttv~~mpn~~p~~~~~ 54 (337)
T cd01302 1 LLVLPGFIDIHVHLRDPG----------------------GTTYKEDFESGS----RAAAAGGVTTVIDMPNTGPPPIDL 54 (337)
T ss_pred CEecCCeeEeeeccCCCC----------------------CCCchhHHHHHH----HHHHhCCCcEEEECCCCCCCCCcH
Confidence 579999999999996510 001223333333 67899999999998632 22
Q ss_pred HHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccc-c-ccCCHHHHHHH
Q 015784 151 SEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ-I-MNATDRLLLET 228 (400)
Q Consensus 151 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~e~l~~~ 228 (400)
+..........-+...-....... . ....+.+..++ ...+...++.++.... . ...+.+.+.++
T Consensus 55 ~~~~~~~~~a~~~~~~d~~~~~~~---~-------~~~~~~el~~l----~~~Gv~g~K~f~~~~~~~~~~~~~~~l~~~ 120 (337)
T cd01302 55 PAIELKIKLAEESSYVDFSFHAGI---G-------PGDVTDELKKL----FDAGINSLKVFMNYYFGELFDVDDGTLMRT 120 (337)
T ss_pred HHHHHHHHHhCcCcEeeEEEEEec---c-------CccCHHHHHHH----HHcCCcEEEEEEeccCCCccccCHHHHHHH
Confidence 222222222221111111111000 0 00112222222 2222334565443221 1 15677889999
Q ss_pred HHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCCh-hHHHHHHhcCCe--EEECcc
Q 015784 229 RDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-TEIGLLSRAGVK--VSHCPA 305 (400)
Q Consensus 229 ~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~-~~i~~~~~~~~~--~~~~p~ 305 (400)
++.+.+.|+++.+|+. +.+......+ .+..+.|...... +.++.+++.|+. +.+||.
T Consensus 121 ~~~~~~~g~~v~~H~E-----------------r~~~la~~~g---~~l~i~Hiss~~~le~i~~ak~~g~~vt~ev~ph 180 (337)
T cd01302 121 FLEIASRGGPVMVHAE-----------------RAAQLAEEAG---ANVHIAHVSSGEALELIKFAKNKGVKVTCEVCPH 180 (337)
T ss_pred HHHHHhcCCeEEEeHH-----------------HHHHHHHHhC---CcEEEEeCCCHHHHHHHHHHHHCCCcEEEEcChh
Confidence 9999999999999995 1233333333 3455677664322 445666666644 567776
Q ss_pred ccc------c-----------c---cCcccHHHHHHcCCcEEEcCCCCCCCCCC-----CHH--------HHHHHHHHHh
Q 015784 306 SAM------R-----------M---LGFAPIKEMLHADICVSLGTDGAPSNNRM-----SIV--------DEMYLASLIN 352 (400)
Q Consensus 306 ~~~------~-----------~---~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~-----~~~--------~~~~~~~~~~ 352 (400)
..+ . + .....+...++.|...+++|||.+..... +++ -+..+...+.
T Consensus 181 ~L~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~id~i~sDh~p~~~~~k~~~~~~~~a~~G~~g~e~~l~~~~~ 260 (337)
T cd01302 181 HLFLDESMLRLNGAWGKVNPPLRSKEDREALWEGVKNGKIDTIASDHAPHSKEEKESGKDIWKAPPGFPGLETRLPILLT 260 (337)
T ss_pred hheeCHHHhhCCCceEEEeCCCCCHHHHHHHHHHHhCCCCCEEecCCCCCCHHHhccCCCcccCCCCcccHHHHHHHHHH
Confidence 421 0 0 11224455678899999999998652100 111 1122222221
Q ss_pred cccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 353 KGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 353 ~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.. ...+++++++++++|.|||+++|+.++ |+|++|++|
T Consensus 261 ~~---------~~~~i~~~~~~~~~s~~pA~~~gl~~~-g~i~~G~~A 298 (337)
T cd01302 261 EG---------VKRGLSLETLVEILSENPARIFGLYPK-GTIAVGYDA 298 (337)
T ss_pred HH---------HhcCCCHHHHHHHHHHHHHHHcCCCCC-CccccCCcC
Confidence 11 123589999999999999999999764 999999987
No 108
>cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex. C-P lyase is thought to catalyze the direct cleavage of inactivated C-P bonds to yield inorganic phosphate and the corresponding hydrocarbons. It is responsible for cleavage of alkylphosphonates, which are utilized as sole phosphorus sources by many bacteria.
Probab=99.76 E-value=3.4e-17 Score=145.61 Aligned_cols=143 Identities=16% Similarity=0.194 Sum_probs=105.9
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCC
Q 015784 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGV 298 (400)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~ 298 (400)
..+++.++.+++.|+++|+++.+|+.++... ++.....|+. +++|. .+.+.++.+++.|+
T Consensus 159 ~~~~~~~~~iv~~A~~~gl~vasH~d~~~~~--------------v~~a~~~Gv~----~~E~p--~t~e~a~~a~~~G~ 218 (325)
T cd01306 159 AYAPANRSELAALARARGIPLASHDDDTPEH--------------VAEAHELGVV----ISEFP--TTLEAAKAARELGL 218 (325)
T ss_pred hcCHHHHHHHHHHHHHCCCcEEEecCCChHH--------------HHHHHHCCCe----eccCC--CCHHHHHHHHHCCC
Confidence 3456789999999999999999999876543 2222333432 23443 47888999999999
Q ss_pred eEEECccccccc---cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHH
Q 015784 299 KVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLR 375 (400)
Q Consensus 299 ~~~~~p~~~~~~---~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~ 375 (400)
.+++++...++. .+..+++.+++.|+.++++||+.++ +++....... ...+++++++++
T Consensus 219 ~vv~gapn~lrg~s~~g~~~~~~ll~~Gv~~al~SD~~p~----sll~~~~~la--------------~~~gl~l~eAl~ 280 (325)
T cd01306 219 QTLMGAPNVVRGGSHSGNVSARELAAHGLLDILSSDYVPA----SLLHAAFRLA--------------DLGGWSLPEAVA 280 (325)
T ss_pred EEEecCcccccCccccccHhHHHHHHCCCeEEEEcCCCcH----hHHHHHHHHH--------------HHcCCCHHHHHH
Confidence 999886554443 3456889999999999999999754 2332222111 123589999999
Q ss_pred HHhHHHHHHcCCCCCccccccCcCC
Q 015784 376 MATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 376 ~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++|.|||+++|+++ .|+|++|+.|
T Consensus 281 ~aT~nPA~~lGl~d-~G~I~~G~~A 304 (325)
T cd01306 281 LVSANPARAVGLTD-RGSIAPGKRA 304 (325)
T ss_pred HHhHHHHHHcCCCC-CCCcCCCCCC
Confidence 99999999999986 5999999987
No 109
>PF13147 Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2PUZ_B 2GOK_B 3HM7_E 3D6N_A 1XRT_A 1XRF_A 1YNY_B 1K1D_F ....
Probab=99.76 E-value=9.1e-18 Score=151.38 Aligned_cols=90 Identities=32% Similarity=0.469 Sum_probs=62.5
Q ss_pred CCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCC--CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHH
Q 015784 297 GVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSN--NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETV 373 (400)
Q Consensus 297 ~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a 373 (400)
+..+..+|...... ....++++++++|+++++|||+.+.. .+.+++..+...... .++++++|
T Consensus 209 ~~~~~~~p~~~~~~~~~~~~~~~l~~~Gv~~~l~sD~~~~~~~~~~~~~~~~~~~~~~--------------~gl~~~~a 274 (304)
T PF13147_consen 209 GIRFKVLPPLRLDLREDRAALRELLEAGVPVALGSDHAPSSTEGSGDLLHEAMRLAVR--------------AGLSPEEA 274 (304)
T ss_dssp GGGGEESSCHHHHTHHHHHHHHHHHHTTSSEEEEE-BBTTTTTCTTTHHHHHHHHHHH--------------TSSTHHHH
T ss_pred CceeeeCCCccccchhhhHHHHHHHhCCCeEEEEcCCcccccccccccchhhhhHHhh--------------cCCCHHHH
Confidence 33344444433212 34567789999999999999998642 223444433333322 35999999
Q ss_pred HHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 374 LRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 374 l~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++++|.|||++||+++++|+|++||+|
T Consensus 275 l~~~T~~pA~~lgl~~~~G~i~~G~~A 301 (304)
T PF13147_consen 275 LRAATSNPARILGLDDDKGSIAPGKDA 301 (304)
T ss_dssp HHHHTHHHHHHTTBTTTSSSTSTTSB-
T ss_pred HHHHHHHHHHHhCCCCCCccCCCCCCC
Confidence 999999999999998788999999987
No 110
>COG1229 FwdA Formylmethanofuran dehydrogenase subunit A [Energy production and conversion]
Probab=99.75 E-value=2.5e-16 Score=136.90 Aligned_cols=211 Identities=12% Similarity=0.089 Sum_probs=112.8
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccc---c
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA---K 95 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~---~ 95 (400)
+.++|+|+.|+++-.. ---++-+|.|+||+|++-..-.+ ...+|||+.|+.||||-+|+|+|+...-. |
T Consensus 3 ~e~~IKNg~V~dPlng-ingE~MDI~vkdGKIVe~sev~~-------~~aKVIDA~gklvm~GGvD~HsHvAG~KvNvGR 74 (575)
T COG1229 3 MEILIKNGIVYDPLNG-INGEKMDICVKDGKIVEESEVSE-------SKAKVIDASGKLVMPGGVDSHSHVAGAKVNVGR 74 (575)
T ss_pred ceEEeecCEEecCccC-CCCceeeEEeecCeEeeeccccc-------ccceEEeccCcEEecCccccccccccccccccc
Confidence 5689999999975321 22367799999999998643221 24799999999999999999999976322 2
Q ss_pred cccCCCChhHhhhhcc-ccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC--cCCHHHHHHHHHHcCCeEEEeccccc
Q 015784 96 GIADDVDLMTWLHDRI-WPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--GQHVSEMAKAVELLGLRACLVQSTMD 172 (400)
Q Consensus 96 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~ 172 (400)
.+.+......-+.... .+....++....+ ..-.+..+.|+|+++... +...+-..+......+-...+...+.
T Consensus 75 ~~rPed~rk~~~~~~gk~rag~G~svpst~----~~GY~YA~mGYTtv~EaA~Ppl~arHtHEE~~~tPilD~~a~~lfg 150 (575)
T COG1229 75 IMRPEDSRKVVLKKTGKTRAGSGYSVPSTY----KTGYRYAKMGYTTVIEAAIPPLLARHTHEEFRATPILDKAAYPLFG 150 (575)
T ss_pred eeChhhhhhhhhhhcccccccccccccccc----hhhhhhhhccceeEeeccCCccccccchhhhhcccccccccccccc
Confidence 1221111101111111 1111222222111 122567889999999743 22233334444444443333444444
Q ss_pred CCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEE-----------------eeccccccCCH-HHHHHHHHHHHH
Q 015784 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIW-----------------FGIRQIMNATD-RLLLETRDMARE 234 (400)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~-e~l~~~~~~a~~ 234 (400)
.+|+.-....+...+.+..-...+++..+.. .++++ -.+-..+..+| |.+..+.+.-.+
T Consensus 151 nNw~vmeYi~egd~ek~aAyvAW~lkatkgy---giKiVNPgG~eaWgwG~NV~sLddpvp~FdiTP~EIi~glaevnE~ 227 (575)
T COG1229 151 NNWFVMEYIREGDMEKAAAYVAWLLKATKGY---GIKIVNPGGVEAWGWGKNVHSLDDPVPYFDITPREIIKGLAEVNER 227 (575)
T ss_pred cchhhhhhhhcCCHHHHHHHHHHHHHhcccc---eEEEECCCCcccccccCCcccccCCCCCcccCHHHHHHHHHHHHHh
Confidence 4433222222223333333333444443332 12221 11112345554 567778888888
Q ss_pred cCCe--eeEecC
Q 015784 235 FKTG--IHMHVA 244 (400)
Q Consensus 235 ~~~~--v~~H~~ 244 (400)
.+++ +|+||.
T Consensus 228 L~lphsIHlH~N 239 (575)
T COG1229 228 LGLPHSIHLHCN 239 (575)
T ss_pred hCCCcceEeccc
Confidence 8988 566665
No 111
>cd01318 DHOase_IIb Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This group contains the archeal members of the DHOase family.
Probab=99.75 E-value=2.9e-16 Score=143.67 Aligned_cols=164 Identities=16% Similarity=0.146 Sum_probs=94.8
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhh-----cCCCCC------hH-HHHhHhCCCCCCeeeEEecCCCh
Q 015784 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT-----RKVDHG------TV-TFLDKIEFLQNNLLSAHTVWVNH 287 (400)
Q Consensus 220 ~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~-----~~~~~~------~~-~~l~~~~~~~~~~~~~h~~~~~~ 287 (400)
.+...|.++++.+. .++.+|+.+........... +..++- .+ +.+.-....+.+..+.|... .
T Consensus 108 ~~~~~l~~~~~~~~---~~v~~H~E~~~l~~~~~~~~~~~~~~~~~~P~~aE~~av~r~~~la~~~~~~~hi~Hvs~--~ 182 (361)
T cd01318 108 DDEETLERIFAEGS---VLVTFHAEDEDRLRENRKELKGESAHPRIRDAEAAAVATARALKLARRHGARLHICHVST--P 182 (361)
T ss_pred CCHHHHHHHHHhcC---CeEEEeCCChHHHHHHHhhhhhccCCCCcCCHHHHHHHHHHHHHHHHHHCCCEEEEeCCC--H
Confidence 56778888887764 78999996543211111000 000000 11 12222223445666667665 3
Q ss_pred hHHHHHHhc--CCeEEECcccccc-------c----cCccc---------HHHHHHcCCcEEEcCCCCCCCC--------
Q 015784 288 TEIGLLSRA--GVKVSHCPASAMR-------M----LGFAP---------IKEMLHADICVSLGTDGAPSNN-------- 337 (400)
Q Consensus 288 ~~i~~~~~~--~~~~~~~p~~~~~-------~----~~~~~---------~~~~~~~Gv~v~~gtD~~~~~~-------- 337 (400)
+.++.+++. ++.+.+||...+- . .-.+| +.+.+++|...+++|||.|...
T Consensus 183 ~~~~~i~~~k~~vt~ev~ph~L~l~~~~~~~~~~~~k~~PPlr~~~d~~aL~~~l~~G~id~i~SDh~P~~~~~k~~~~~ 262 (361)
T cd01318 183 EELKLIKKAKPGVTVEVTPHHLFLDVEDYDRLGTLGKVNPPLRSREDRKALLQALADGRIDVIASDHAPHTLEEKRKGYP 262 (361)
T ss_pred HHHHHHHHhCCCeEEEeCHHHhhcCHHHHhcCCCeEEEeCCCCCHHHHHHHHHHHhCCCCCEEeeCCCCCCHHHccCChh
Confidence 456666655 7889999985220 0 00123 3445888999999999865411
Q ss_pred ----CCCHHHH-HHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 338 ----RMSIVDE-MYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 338 ----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+..-... +.....+. ...+++++++++++|.|||+++|+.+ +|+|++|++|
T Consensus 263 ~a~~G~~g~e~~l~~~~~~v-----------~~~~l~l~~a~~~~t~nPA~~lgl~~-~G~i~~G~~A 318 (361)
T cd01318 263 AAPSGIPGVETALPLMLTLV-----------NKGILSLSRVVRLTSHNPARIFGIKN-KGRIAEGYDA 318 (361)
T ss_pred hCCCCCccHHHHHHHHHHHH-----------HcCCCCHHHHHHHHhHHHHHHhCCCC-CCccCCCCcC
Confidence 1110110 11111111 23469999999999999999999976 6999999987
No 112
>KOG3892 consensus N-acetyl-glucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=99.69 E-value=1.3e-15 Score=125.53 Aligned_cols=328 Identities=16% Similarity=0.145 Sum_probs=174.6
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
+-|.|++|+-.. . +.+.+++|.||||..=-+ +--.-..-+.+.|||.|+++.|||||+.+..+. +
T Consensus 14 lQFtNCrilR~g---~-l~~edlWVR~GRIldpe~---vFFeErt~Ad~riDCgG~IlaPGfIDlQiNGGf--------G 78 (407)
T KOG3892|consen 14 LQFTNCRILRGG---K-LLREDLWVRGGRILDPEK---VFFEERTVADERIDCGGRILAPGFIDLQINGGF--------G 78 (407)
T ss_pred eeeeeeEEeeCC---c-eeehheeEeCCeecCccc---ccceeccchhheeccCCeeecCceEEEEecCcc--------c
Confidence 358999999643 2 345699999999974222 100001124678999999999999999988755 2
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC-cCCHHHHHHHHH-----HcCCeEEEecccccCC
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQHVSEMAKAVE-----LLGLRACLVQSTMDCG 174 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~-~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~ 174 (400)
.+| .++.++.-.......++.+++|+|++.... ....+...+..- ..+....-..+.+.+|
T Consensus 79 vDF-------------S~dte~~~eGvAlVAr~ll~hGvtsf~Pt~~tsp~~~YHkilP~ip~~~~~p~GaG~LG~HlEG 145 (407)
T KOG3892|consen 79 VDF-------------SQDTEDVGEGVALVARQLLSHGVTSFCPTLVTSPPEVYHKILPQIPVKSGGPHGAGVLGLHLEG 145 (407)
T ss_pred ccc-------------ccchhhhhhhHHHHHHHHHhcCCCcCCCccccCCchhhhhhccccccccCCCCccceeeeeccC
Confidence 221 233344334444466889999999999732 111111111111 1122222234566788
Q ss_pred CCCCcccccCCchHHHHHH-----HHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchh
Q 015784 175 EGLPASWAVRTTDDCIQSQ-----KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (400)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~ 249 (400)
++++.+..+..++..+... ..+...|... .+++++. ......-. .++++.....|+.|.+-.. .+.
T Consensus 146 PFIs~~KrG~HPE~~i~s~~~~~~~~l~~tYGsl--eni~IvT-lAPEl~~~----~evi~~lv~~gitVslGHS--~A~ 216 (407)
T KOG3892|consen 146 PFISREKRGAHPEAHIRSFEADAFQDLLATYGSL--ENIRIVT-LAPELGGA----QEVIRALVARGITVSLGHS--VAD 216 (407)
T ss_pred CccChhhcCCCHHHHHhccCccHHHHHHHHhCCc--cceEEEE-ecccccCc----HHHHHHHHhcceEEeeccc--hhc
Confidence 8888888888888877632 2233334443 4566532 11111222 3444555556666654322 111
Q ss_pred hhHHhhhcCCCCChHHHHhHh---------C---------CCCCCe----eeEEecCCChhHHHHHHhc---CCeEEECc
Q 015784 250 NQVVMDTRKVDHGTVTFLDKI---------E---------FLQNNL----LSAHTVWVNHTEIGLLSRA---GVKVSHCP 304 (400)
Q Consensus 250 ~~~~~~~~~~~~~~~~~l~~~---------~---------~~~~~~----~~~h~~~~~~~~i~~~~~~---~~~~~~~p 304 (400)
...-....-.+...+.+|... | +...++ ++..+.+..+..++...+. |...+...
T Consensus 217 L~~gE~AV~sGat~ITHLFNAMlpfHHRDPGlvGLLtSd~lp~gr~iyyGiIsDG~HThpaALRIAyrthpqGLvLVTDA 296 (407)
T KOG3892|consen 217 LRAGEDAVWSGATFITHLFNAMLPFHHRDPGLVGLLTSDRLPAGRCIYYGIISDGTHTHPAALRIAYRTHPQGLVLVTDA 296 (407)
T ss_pred cCcHHHHHhccchHHHHHHHhccccccCCCceeEEeecCCCCCCCeEEEEEecCCccCChhHhhhhhhcCCCceEEEecc
Confidence 111111111111233222111 1 111121 5566667666666665553 44444443
Q ss_pred cccccc-cCcccHHHH---HHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHH
Q 015784 305 ASAMRM-LGFAPIKEM---LHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATIN 380 (400)
Q Consensus 305 ~~~~~~-~~~~~~~~~---~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~ 380 (400)
..++-+ .+..-+.+. .+.+--...||..... +.-.|-...|... ++.+++.+-||+++|..
T Consensus 297 I~ALGl~~GvH~lGqq~v~Vkgl~A~~aGT~Tl~G-SiApMd~CvRhf~--------------kATgCs~e~AleaAtlh 361 (407)
T KOG3892|consen 297 IPALGLGNGVHTLGQQEVEVKGLTAYVAGTKTLSG-SIAPMDVCVRHFL--------------KATGCSMESALEAATLH 361 (407)
T ss_pred hhhcccccccccccceeEEEcceEEEeeccccccc-cccCcHHHHHHHH--------------HhcCCcHHHHHhhhccC
Confidence 334333 332222111 1111123345544322 1122333333322 24579999999999999
Q ss_pred HHHHcCCCCCccccccCcCC
Q 015784 381 GAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 381 ~A~~lg~~~~~G~i~~G~~A 400 (400)
||+.||+++.+|+|..|.+|
T Consensus 362 PAqlLg~ek~KGTLDfG~dA 381 (407)
T KOG3892|consen 362 PAQLLGLEKSKGTLDFGADA 381 (407)
T ss_pred hHHhhccccccccccccccC
Confidence 99999999999999999886
No 113
>PF13594 Amidohydro_5: Amidohydrolase; PDB: 4F0R_A 4F0S_A 1NFG_C 2FVM_A 2FVK_A 2FTY_D 1YBQ_B 1POJ_B 1ONW_A 2AQO_B ....
Probab=99.59 E-value=2.5e-15 Score=102.30 Aligned_cols=44 Identities=27% Similarity=0.643 Sum_probs=34.5
Q ss_pred EEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCc
Q 015784 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (400)
Q Consensus 43 i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~ 90 (400)
|+|+||||++|++....+ ....++||++|++|+|||||+|+|+.
T Consensus 1 V~I~~g~I~~v~~~~~~~----~~~~~viD~~g~~v~PG~ID~H~H~~ 44 (68)
T PF13594_consen 1 VLIEDGKIVAVGPDSELP----ADAAEVIDAKGKYVMPGFIDMHTHLG 44 (68)
T ss_dssp EEEETTEEEEEESSCCTT----STCCEEEEETTCEEEE-EEEEEE-TT
T ss_pred CEEECCEEEEeCCCCCCC----CCCCEEEECCCCEEeCCeEeeeeccc
Confidence 789999999996544432 23568999999999999999999985
No 114
>COG3653 N-acyl-D-aspartate/D-glutamate deacylase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.56 E-value=3.8e-12 Score=112.00 Aligned_cols=70 Identities=17% Similarity=0.258 Sum_probs=56.7
Q ss_pred CCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcc
Q 015784 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (400)
Q Consensus 16 ~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~ 91 (400)
++.++++|+++.||++.+... ...+|.|+||+|++|++.... ...+.++||+.|++|.|||||+|+|-..
T Consensus 3 ~~~YD~ViR~g~ifDGtGnp~--f~tdvgIrDGvIaav~kg~~d----g~~~~eevDaagriVaPGFIDvHtHyD~ 72 (579)
T COG3653 3 MVTYDVVIRDGLIFDGTGNPP--FTTDVGIRDGVIAAVAKGALD----GTGCPEEVDAAGRIVAPGFIDVHTHYDA 72 (579)
T ss_pred ceeeeEEEeeceEEeCCCCCc--cccccccccceEEEEeccccc----ccCCCeeecccCcEecccEEEeeecccc
Confidence 456899999999998776644 445999999999999986431 1123489999999999999999999764
No 115
>cd01294 DHOase Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis. In contrast to the large polyfunctional CAD proteins of higher organisms, this group of DHOases is monofunctional and mainly dimeric.
Probab=99.46 E-value=1.7e-11 Score=111.69 Aligned_cols=161 Identities=10% Similarity=0.082 Sum_probs=94.2
Q ss_pred CHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHh-C-CCCCCeeeEEecCCChhHHHHHHhc--
Q 015784 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKI-E-FLQNNLLSAHTVWVNHTEIGLLSRA-- 296 (400)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~~h~~~~~~~~i~~~~~~-- 296 (400)
+.+.+..+++.+.+.|++|.+|+.+........... ...+..+..+ . ..+.+..+.|... .+.++.+++.
T Consensus 111 d~~~l~~~~e~~~~~g~~V~vHaE~~~l~~~~~~~e----~~~~~~~~~lA~~~p~~~v~i~Hvst--~~~~~~i~~ak~ 184 (335)
T cd01294 111 DLEKIYPVLEAMQKLGMPLLVHGEVPDFKIDVLDRE----AKFIPVLEPLAQRFPKLKIVLEHITT--ADAVEYVKSCNE 184 (335)
T ss_pred CHHHHHHHHHHHHHcCCeEEEecCCCcccccchhhH----HHHHHHHHHHHHHcCCCeEEEecccH--HHHHHHHHhCCC
Confidence 457899999999999999999996543211000000 0011111111 1 2244666677653 4555555443
Q ss_pred CCeEEECccccc----cc-c---C-----ccc---------HHHHHHcCCcE-EEcCCCCCCCC----------CCCHHH
Q 015784 297 GVKVSHCPASAM----RM-L---G-----FAP---------IKEMLHADICV-SLGTDGAPSNN----------RMSIVD 343 (400)
Q Consensus 297 ~~~~~~~p~~~~----~~-~---~-----~~~---------~~~~~~~Gv~v-~~gtD~~~~~~----------~~~~~~ 343 (400)
++.+.+||.... .. . + .+| +.+.+..|... .++|||.|... ++..+.
T Consensus 185 ~vt~Et~ph~L~l~~~~~~~~~~g~~~k~~PPlR~~~d~~~L~~~l~~G~id~~i~SDHaP~~~~~K~~~~g~~Gi~~~~ 264 (335)
T cd01294 185 NVAATITPHHLLLTRDDLLGGGLNPHLYCKPVAKRPEDREALRKAATSGHPKFFLGSDSAPHPKSNKESSCGCAGIFSAP 264 (335)
T ss_pred CcEEEEchhHheeeHHHhcCCCCCCCeEEcCCCCCHHHHHHHHHHHHcCCCCeEEECCCCCCCCccccCCCCCccccCHH
Confidence 588888887422 00 0 1 123 33456779888 59999976421 122221
Q ss_pred HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCc
Q 015784 344 EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGK 398 (400)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~ 398 (400)
.+.... +.. .. .++++++++++++.|||++||+..++|+|.+|.
T Consensus 265 ~~l~~~-~~~---------~~-~~l~l~~~v~~~s~nPA~i~gl~~~kg~i~~~~ 308 (335)
T cd01294 265 IALPYL-AEV---------FE-EHNALDKLEAFASDNGPNFYGLPPNKKTITLVK 308 (335)
T ss_pred HHHHHH-HHH---------Hh-ccCCHHHHHHHHHhHHHHHhCCCCCCCeEEEEe
Confidence 111111 110 01 259999999999999999999988889998874
No 116
>cd00443 ADA_AMPD Adenosine/AMP deaminase. Adenosine deaminases (ADAs) are present in pro- and eukaryotic organisms and catalyze the zinc dependent irreversible deamination of adenosine nucleosides to inosine nucleosides and ammonia. The eukaryotic AMP deaminase catalyzes a similar reaction leading to the hydrolytic removal of an amino group at the 6 position of the adenine nucleotide ring, a branch point in the adenylate catabolic pathway.
Probab=99.43 E-value=3.1e-11 Score=108.07 Aligned_cols=136 Identities=21% Similarity=0.246 Sum_probs=103.2
Q ss_pred CHHHHHHHHHHHHHcC-CeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCCh--hHHHHHHhcC
Q 015784 221 TDRLLLETRDMAREFK-TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH--TEIGLLSRAG 297 (400)
Q Consensus 221 ~~e~l~~~~~~a~~~~-~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~--~~i~~~~~~~ 297 (400)
+...+...++.+++.| +++.+|+.|.... .........+ ...+.|+..+.+ ++++++++++
T Consensus 151 ~~~~f~~~~~~ar~~g~l~~t~HaGE~~~~--------------~~v~~~~~~~--~~RIgHg~~~~~~p~~~~~l~~~~ 214 (305)
T cd00443 151 PLRDFYSYYEYARRLGLLGLTLHCGETGNR--------------EELLQALLLL--PDRIGHGIFLLKHPELIYLVKLRN 214 (305)
T ss_pred CHHHHHHHHHHHHHcCCcceEEeecCCCCh--------------HHHHHHHHhc--cceeeceEecCCCHHHHHHHHHcC
Confidence 5678889999999999 9999999987431 1111222222 456899999876 9999999999
Q ss_pred CeEEECccccccccC-----cccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHH
Q 015784 298 VKVSHCPASAMRMLG-----FAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAET 372 (400)
Q Consensus 298 ~~~~~~p~~~~~~~~-----~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 372 (400)
+.+.+||.||..+.. ..|+++|+++|+++++|||.+..+.. ++.+++..+.... +++.++
T Consensus 215 i~ie~CP~SN~~~~~~~~~~~hP~~~~~~~G~~v~i~TDd~~~~~~-~l~~E~~~~~~~~--------------~l~~~~ 279 (305)
T cd00443 215 IPIEVCPTSNVVLGTVQSYEKHPFMRFFKAGLPVSLSTDDPGIFGT-SLSEEYSLAAKTF--------------GLTFED 279 (305)
T ss_pred CEEEECcchhhhhcCCCChhhChHHHHHHCCCeEEEeCCCCcccCC-ChHHHHHHHHHHc--------------CcCHHH
Confidence 999999999987622 36999999999999999999876333 8889988876443 488888
Q ss_pred HHHHHhHHHHHHcCCC
Q 015784 373 VLRMATINGAKSVLWD 388 (400)
Q Consensus 373 al~~~T~~~A~~lg~~ 388 (400)
..+++ .|+-+...++
T Consensus 280 l~~l~-~nsi~~sf~~ 294 (305)
T cd00443 280 LCELN-RNSVLSSFAK 294 (305)
T ss_pred HHHHH-HHHHHHhcCC
Confidence 77665 5555544443
No 117
>cd01316 CAD_DHOase The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate synthetase-aspartate transcarbamoylase-dihydroorotase, which catalyzes the first three steps of de novo pyrimidine nucleotide biosynthesis. Dihydroorotase (DHOase) catalyzes the third step, the reversible interconversion of carbamoyl aspartate to dihydroorotate.
Probab=99.29 E-value=3e-10 Score=103.05 Aligned_cols=28 Identities=11% Similarity=0.071 Sum_probs=24.3
Q ss_pred CCCCHHHHHHHHhHHHHHHcCCCCCccc
Q 015784 366 AALPAETVLRMATINGAKSVLWDNDIGS 393 (400)
Q Consensus 366 ~~l~~~~al~~~T~~~A~~lg~~~~~G~ 393 (400)
..+++.+++++.+.|||+++|+..+.|.
T Consensus 259 ~~i~l~~l~~~~s~nPAk~~gl~~~~~~ 286 (344)
T cd01316 259 GRLTIEDIVDRLHTNPKRIFNLPPQSDT 286 (344)
T ss_pred CCCCHHHHHHHHHHhHHHHhCCCCCCCC
Confidence 3599999999999999999999765554
No 118
>cd00530 PTE Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon. PTE exists as a homodimer with one active site per monomer. The active site is located next to a binuclear metal center, at the C-terminal end of a TIM alpha- beta barrel motif. The native enzyme contains two zinc ions at the active site however these can be replaced with other metals such as cobalt, cadmium, nickel or manganese and the enzyme remains active.
Probab=99.28 E-value=1.6e-09 Score=97.13 Aligned_cols=238 Identities=10% Similarity=0.012 Sum_probs=137.5
Q ss_pred HHHHHHHHHHHHhcCcceeeccCcC----CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCc-hHHHHHHHHHHH
Q 015784 124 YISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTT-DDCIQSQKELYA 198 (400)
Q Consensus 124 ~~~~~~~~~~~l~~GvTt~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 198 (400)
+..+...+.++++.|+|++.+.+.. ......+.++..+++.+...+++.... .+.+..... ....+...+.+.
T Consensus 31 ~~~~~~~~~~~~~~Gvttiv~~~~~~~~~~~~~~~~~~~~~g~~v~~~~G~hp~~~--~~~~~~~~~~~~l~~~~~~~l~ 108 (293)
T cd00530 31 VEAAKEELKRFRAHGGRTIVDATPPGIGRDVEKLAEVARATGVNIVAATGFYKDAF--YPEWVRLRSVEELTDMLIREIE 108 (293)
T ss_pred HHHHHHHHHHHHHcCCCeEEEcCCcccCcCHHHHHHHHHHhCCcEEEecccCCCcc--ChHHHhhCCHHHHHHHHHHHHH
Confidence 4556667788999999999997743 456677788888887766655543211 111111111 111111111111
Q ss_pred H-hccCC--CCCeEEEeecc-ccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCC
Q 015784 199 K-HHHAA--DGRIRIWFGIR-QIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQ 274 (400)
Q Consensus 199 ~-~~~~~--~~~~~~~~~~~-~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 274 (400)
. +.... .+.++- ++.. .......+.++..+++|++.|+||++|+.+..... ...++.+...+...
T Consensus 109 ~~~~~~~i~~~~IGE-igld~~~~~~q~~~f~~~~~lA~~~~~Pv~iH~~~~~~~~----------~~~l~~l~~~g~~~ 177 (293)
T cd00530 109 EGIEGTGIKAGIIKE-AGGSPAITPLEEKVLRAAARAQKETGVPISTHTQAGLTMG----------LEQLRILEEEGVDP 177 (293)
T ss_pred hccccCCcCceEEEE-eecCCCCCHHHHHHHHHHHHHHHHHCCeEEEcCCCCcccc----------HHHHHHHHHcCCCh
Confidence 1 11110 011211 2222 12223334688999999999999999997641110 11556667767655
Q ss_pred CCeeeEEecC-CChhHHHHHHhcCCeEEECcccccc---c----cCcccHHHHHHcCC--cEEEcCCCCCCCCC------
Q 015784 275 NNLLSAHTVW-VNHTEIGLLSRAGVKVSHCPASAMR---M----LGFAPIKEMLHADI--CVSLGTDGAPSNNR------ 338 (400)
Q Consensus 275 ~~~~~~h~~~-~~~~~i~~~~~~~~~~~~~p~~~~~---~----~~~~~~~~~~~~Gv--~v~~gtD~~~~~~~------ 338 (400)
.+.++.|+.. -+.+.++.+.+.|+.+.++...... . .....++++++.|. ++.++||.+...+.
T Consensus 178 ~~~vi~H~~~~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ill~TD~p~~~~~~~~~~~ 257 (293)
T cd00530 178 SKVVIGHLDRNDDPDYLLKIAALGAYLEFDGIGKDKIFGYPSDETRADAVKALIDEGYGDRLLLSHDVFRKSYLEKRYGG 257 (293)
T ss_pred hheEEeCCCCCCCHHHHHHHHhCCCEEEeCCCCcccccCCCCHHHHHHHHHHHHHCCCcCCEEEeCCcCchhhhhhccCC
Confidence 5668899984 4678899999999988776433221 0 11234677888886 77999998742110
Q ss_pred CCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 015784 339 MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385 (400)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~l 385 (400)
-.+..-+.......+ ..+++.+++.++.+.||+++|
T Consensus 258 ~~~~~~~~~~~~~~~-----------~~g~~~e~i~~~~~~N~~~lf 293 (293)
T cd00530 258 HGYDYILTRFIPRLR-----------ERGVTEEQLDTILVENPARFL 293 (293)
T ss_pred CChHHHHHHHHHHHH-----------HcCCCHHHHHHHHHHCHHHhC
Confidence 011111222222211 346899999999999999875
No 119
>PTZ00124 adenosine deaminase; Provisional
Probab=99.28 E-value=2.7e-09 Score=96.78 Aligned_cols=136 Identities=15% Similarity=0.196 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHcCCeeeEecCCCc--hhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC--ChhHHHHHHhcCC
Q 015784 223 RLLLETRDMAREFKTGIHMHVAEIP--YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV--NHTEIGLLSRAGV 298 (400)
Q Consensus 223 e~l~~~~~~a~~~~~~v~~H~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~--~~~~i~~~~~~~~ 298 (400)
..+..+++.|++.|+++.+|++|.. ..... ..+.+..++. ..+.|+..+ +++.++.++++++
T Consensus 206 ~~f~~~f~~Ar~~Gl~~t~HaGE~~~~~~~~~----------v~~ai~~l~~----~RIGHG~~~~~d~~l~~~l~~~~I 271 (362)
T PTZ00124 206 KPFKDIFDYVREAGVNLTVHAGEDVTLPNLNT----------LYSAIQVLKV----KRIGHGIRVAESQELIDMVKEKDI 271 (362)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCCCCcchh----------HHHHHHHhCC----CccccccccCCCHHHHHHHHHcCC
Confidence 4578888999999999999999852 11110 1222333332 457899987 5788999999999
Q ss_pred eEEECcccccccc-----CcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHH
Q 015784 299 KVSHCPASAMRML-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETV 373 (400)
Q Consensus 299 ~~~~~p~~~~~~~-----~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a 373 (400)
.+.+||.||.... ...|++.|+++|++|+++||.+.. .+.++.+|+..+... .+++.++.
T Consensus 272 ~lEvCPtSN~~~~~v~~~~~HPi~~l~~~Gv~v~InTDDp~~-~~t~l~~Ey~~~~~~--------------~gls~~~l 336 (362)
T PTZ00124 272 LLEVCPISNVLLNNAKSMDTHPIRKLYDAGVKVSVNSDDPGM-FLTNINDDYEELYTH--------------LNFTLADF 336 (362)
T ss_pred eEEECCcchhhhhcCCchhhHHHHHHHHCCCcEEEeCCCccc-cCCChhHHHHHHHHH--------------cCCCHHHH
Confidence 9999999998652 235899999999999999999865 334677887776532 35999998
Q ss_pred HHHHhHHHHHHcCCC
Q 015784 374 LRMATINGAKSVLWD 388 (400)
Q Consensus 374 l~~~T~~~A~~lg~~ 388 (400)
.+++ .|+.++.-++
T Consensus 337 ~~l~-~nai~asF~~ 350 (362)
T PTZ00124 337 MKMN-EWALEKSFLD 350 (362)
T ss_pred HHHH-HHHHHHhcCC
Confidence 8874 4554444333
No 120
>cd01321 ADGF Adenosine deaminase-related growth factors (ADGF), a novel family of secreted growth-factors with sequence similarty to adenosine deaminase.
Probab=99.18 E-value=4.2e-09 Score=95.46 Aligned_cols=146 Identities=13% Similarity=0.090 Sum_probs=99.9
Q ss_pred CCHHHHHHHHHHHHHcC--CeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC--hhHHHHHHh
Q 015784 220 ATDRLLLETRDMAREFK--TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSR 295 (400)
Q Consensus 220 ~~~e~l~~~~~~a~~~~--~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~--~~~i~~~~~ 295 (400)
.+++.+..+++.|++.| +++.+|+.|......... .+..+.+ .++ ...|.|+..+. ++.++.+++
T Consensus 176 ~~~~~f~~~f~~ar~~g~~l~~t~HAGE~~~~~~~~~------~~v~~al-~lg----~~RIGHG~~~~~dp~ll~~l~~ 244 (345)
T cd01321 176 RPLLDFLPQLLWFPKQCAEIPFFFHAGETNGDGTETD------ENLVDAL-LLN----TKRIGHGFALPKHPLLMDLVKK 244 (345)
T ss_pred CCHHHHHHHHHHHHHhCCCCceEeecCCCcCCCCCCh------hHHHHHH-HhC----CCcCccccccCcCHHHHHHHHH
Confidence 45678889999999999 999999998752100000 0012222 222 24578999874 788999999
Q ss_pred cCCeEEECcccccccc-----CcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCH
Q 015784 296 AGVKVSHCPASAMRML-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPA 370 (400)
Q Consensus 296 ~~~~~~~~p~~~~~~~-----~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (400)
+++.+.+||.||.... ...|+++|+++|++|+++||.+......++..+...+.... ...+++.
T Consensus 245 ~~I~lEvCPtSN~~~~~v~~~~~HPl~~ll~~Gv~vtinTDDp~~f~t~~l~~Ey~~~~~~~-----------g~~~l~~ 313 (345)
T cd01321 245 KNIAIEVCPISNQVLGLVSDLRNHPAAALLARGVPVVISSDDPGFWGAKGLSHDFYQAFMGL-----------APADAGL 313 (345)
T ss_pred cCCeEEECcchhhhhccccchhhChHHHHHHCCCeEEEeCCCcchhCCCCchHHHHHHHHHh-----------ccCCCCH
Confidence 9999999999998652 23599999999999999999986533226777776654321 1123888
Q ss_pred HHHHHHHhHHHHHHcCCC
Q 015784 371 ETVLRMATINGAKSVLWD 388 (400)
Q Consensus 371 ~~al~~~T~~~A~~lg~~ 388 (400)
++..++ +.|+.++..++
T Consensus 314 ~~l~~l-~~nsi~~sF~~ 330 (345)
T cd01321 314 RGLKQL-AENSIRYSALS 330 (345)
T ss_pred HHHHHH-HHHHHHHHCCC
Confidence 886554 55665555444
No 121
>PRK09875 putative hydrolase; Provisional
Probab=99.05 E-value=1.6e-07 Score=82.67 Aligned_cols=240 Identities=13% Similarity=0.045 Sum_probs=149.3
Q ss_pred HHHHHHHHHHHHhcCcceeeccC----cCCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHH
Q 015784 124 YISTLLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAK 199 (400)
Q Consensus 124 ~~~~~~~~~~~l~~GvTt~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (400)
+..+...+..+.+.|..|+.+.. +..+..+.+.+++.|++.+.+.+++...+ .|......+.++..+...+.+..
T Consensus 33 ~~~~~~el~~~~~~Gg~tiVd~T~~g~GRd~~~l~~is~~tgv~Iv~~TG~y~~~~-~p~~~~~~~~e~la~~~i~ei~~ 111 (292)
T PRK09875 33 YAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQDAF-FPEHVATRSVQELAQEMVDEIEQ 111 (292)
T ss_pred HHHHHHHHHHHHHhCCCeEEecCCCccCcCHHHHHHHHHHhCCcEEEcCcCCCCcc-CCHHHhcCCHHHHHHHHHHHHHH
Confidence 34445566778888999999864 35678889999999999988877775442 34444333344333333333333
Q ss_pred hccC---CCCCe-EEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCC
Q 015784 200 HHHA---ADGRI-RIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQN 275 (400)
Q Consensus 200 ~~~~---~~~~~-~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 275 (400)
.... ..+.+ ++............+.++.+.+.+++.|.+|.+|........+ .++.+.+.|+.-.
T Consensus 112 Gi~gt~ikaGvIGeiG~~~~~it~~E~kvl~Aaa~a~~~TG~pi~~Ht~~~~~g~e-----------~l~il~e~Gvd~~ 180 (292)
T PRK09875 112 GIDGTELKAGIIAEIGSSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMGLE-----------QLALLQAHGVDLS 180 (292)
T ss_pred hhccCCCcccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHCCcEEEcCCCccchHH-----------HHHHHHHcCcCcc
Confidence 2221 12333 2211111112222346788888899999999999754332111 4577788888777
Q ss_pred CeeeEEecCC-ChhHHHHHHhcCCeEEECccc-c-ccc--cCcccHHHHHHcC--CcEEEcCCCCCCC-----CCCCHHH
Q 015784 276 NLLSAHTVWV-NHTEIGLLSRAGVKVSHCPAS-A-MRM--LGFAPIKEMLHAD--ICVSLGTDGAPSN-----NRMSIVD 343 (400)
Q Consensus 276 ~~~~~h~~~~-~~~~i~~~~~~~~~~~~~p~~-~-~~~--~~~~~~~~~~~~G--v~v~~gtD~~~~~-----~~~~~~~ 343 (400)
+.++.|.... +.+.++++++.|+.+.++-.. . +.. .....++.+.+.| =++.+++|..... .+..+-.
T Consensus 181 rvvi~H~d~~~d~~~~~~l~~~G~~l~fD~~g~~~~~pd~~r~~~i~~L~~~Gy~drilLS~D~~~~~~~~~~gg~G~~~ 260 (292)
T PRK09875 181 RVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYPDEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDY 260 (292)
T ss_pred eEEEeCCCCCCCHHHHHHHHHcCCEEEeccCCCcccCCHHHHHHHHHHHHhcCCCCeEEEeCCCCCcccccccCCCChhH
Confidence 8999999754 567789999999998875221 1 000 1234567788888 4788999975321 1222223
Q ss_pred HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 015784 344 EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 386 (400)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg 386 (400)
-+.......+ +.|++.+++=++.-.||+++|+
T Consensus 261 i~~~~ip~L~-----------~~Gvse~~I~~m~~~NP~r~~~ 292 (292)
T PRK09875 261 LLTTFIPQLR-----------QSGFSQADVDVMLRENPSQFFQ 292 (292)
T ss_pred HHHHHHHHHH-----------HcCCCHHHHHHHHHHCHHHHhC
Confidence 3333332221 4479999999999999999874
No 122
>TIGR00010 hydrolase, TatD family. Several genomes have multiple paralogs related to this family. However, a set of 17 proteins can be found, one each from 17 of the first 20 genomes, such that each member forms a bidirectional best hit across genomes with all other members of the set. This core set (and one other near-perfect member), but not the other paralogs, form the seed for this model. Additionally, members of the seed alignment and all trusted hits, but not all paralogs, have a conserved motif DxHxH near the amino end. The member from E. coli was recently shown to have DNase activity.
Probab=99.05 E-value=9.9e-08 Score=83.67 Aligned_cols=214 Identities=11% Similarity=0.051 Sum_probs=119.0
Q ss_pred HHHHhcCcceeeccCcC--CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeE
Q 015784 132 IELIHSGVTCFAEAGGQ--HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIR 209 (400)
Q Consensus 132 ~~~l~~GvTt~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (400)
+.+...|++++..++.. ..+.+.+.++..+ +.+...++.. .+........+++..+.+ .. ..+.
T Consensus 22 ~~~~~~Gv~~~v~~~~~~~~~~~~~~~~~~~~-~i~~~~GihP-------~~~~~~~~~~~~~l~~~l----~~--~~~~ 87 (252)
T TIGR00010 22 ERAKAAGVTAVVAVGTDLEDFLRALELAEKYP-NVYAAVGVHP-------LDVDDDTKEDIKELERLA----AH--PKVV 87 (252)
T ss_pred HHHHHcCCCEEEEecCCHHHHHHHHHHHHHCC-CEEEEEEeCc-------chhhcCCHHHHHHHHHHc----cC--CCEE
Confidence 44667899999976532 2344566666777 6555444332 111111122223333222 11 1222
Q ss_pred EE--eeccccccC-----CHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEe
Q 015784 210 IW--FGIRQIMNA-----TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHT 282 (400)
Q Consensus 210 ~~--~~~~~~~~~-----~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~ 282 (400)
.+ .+....... ..+.+...++.|++.|++|.+|+...... .++.+...+ ....++.|.
T Consensus 88 ~iGEiGld~~~~~~~~~~q~~~~~~~~~~a~~~~~pv~iH~~~~~~~-------------~~~~l~~~~--~~~~~i~H~ 152 (252)
T TIGR00010 88 AIGETGLDYYKADEYKRRQEEVFRAQLQLAEELNLPVIIHARDAEED-------------VLDILREEK--PKVGGVLHC 152 (252)
T ss_pred EEEecccCcCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEecCccHH-------------HHHHHHhcC--CCCCEEEEc
Confidence 11 222211111 23678888999999999999999754332 334555544 123556688
Q ss_pred cCCChhHHHHHHhcCCeEEECccccccccCcccHHHHHHcC--CcEEEcCCCCCCCC-----CCCHHHHHHH-HHHHhcc
Q 015784 283 VWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNN-----RMSIVDEMYL-ASLINKG 354 (400)
Q Consensus 283 ~~~~~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G--v~v~~gtD~~~~~~-----~~~~~~~~~~-~~~~~~~ 354 (400)
..-+.+.+..+.+.|+.+.+...... .....++++++.. =++.++||.+...+ ..+....+.. ...+.+
T Consensus 153 ~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~i~~~~~dril~~TD~p~~~~~~~~~~~~~p~~i~~~~~~~a~- 229 (252)
T TIGR00010 153 FTGDAELAKKLLDLGFYISISGIVTF--KNAKSLREVVRKIPLERLLVETDSPYLAPVPYRGKRNEPAFVRYTVEAIAE- 229 (252)
T ss_pred cCCCHHHHHHHHHCCCeEeeceeEec--CCcHHHHHHHHhCCHHHeEecccCCCCCCCCCCCCCCCChhHHHHHHHHHH-
Confidence 76667788888889999888754322 1122345555543 38999999863210 0011111111 111111
Q ss_pred cccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 015784 355 REVFANGTTDPAALPAETVLRMATINGAKSVLW 387 (400)
Q Consensus 355 ~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~ 387 (400)
..+++++++.++++.||+++|++
T Consensus 230 ----------~~g~~~~~~~~~~~~N~~~~~~~ 252 (252)
T TIGR00010 230 ----------IKGMDVEELAQITTKNAKRLFGL 252 (252)
T ss_pred ----------HhCcCHHHHHHHHHHHHHHHhCc
Confidence 12599999999999999999975
No 123
>PF00962 A_deaminase: Adenosine/AMP deaminase immunodeficiency disease (SCID); InterPro: IPR001365 Adenosine deaminase (3.5.4.4 from EC) catalyzes the hydrolytic deamination of adenosine into inosine and AMP deaminase (3.5.4.6 from EC) catalyzes the hydrolytic deamination of AMP into IMP. It has been shown [] that these two enzymes share three regions of sequence similarities; these regions are centred on residues which are proposed to play an important role in the catalytic mechanism of these two enzymes.; GO: 0019239 deaminase activity, 0009168 purine ribonucleoside monophosphate biosynthetic process; PDB: 3LGG_B 3LGD_B 2AMX_B 3EWD_A 2QVN_A 2PGF_A 2PGR_A 3EWC_A 1W1I_G 1O5R_A ....
Probab=99.02 E-value=3.6e-08 Score=90.08 Aligned_cols=225 Identities=19% Similarity=0.211 Sum_probs=128.7
Q ss_pred ChhhHHHHHHHHHHHHHhcCcceeecc---------CcC-CH--------HHHHHHHHHcCCeEEEecccccCCCCCCcc
Q 015784 119 TEEDSYISTLLCGIELIHSGVTCFAEA---------GGQ-HV--------SEMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (400)
Q Consensus 119 ~~~~~~~~~~~~~~~~l~~GvTt~~~~---------~~~-~~--------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 180 (400)
+.++.+......++++.+.||..+-.. ++. .. ....+..+..++...+.......
T Consensus 72 ~~e~~~~~~~~~l~~~~~dnV~YlElr~~P~~~~~~~~~~~~~~~~~~i~~~~~~a~~~~~i~~~li~~~~R~------- 144 (331)
T PF00962_consen 72 TPEDLRRYAYEVLEDFAEDNVVYLELRFSPQFHAQLGGNLSFDEVVEAIIEGIDRAEKEFGIKVRLIISVLRH------- 144 (331)
T ss_dssp SHHHHHHHHHHHHHHHHHTTEEEEEEEESHHHHHTTTCSSTHHHHHHHHHHHHHHHHHHHTTEEEEEEEEETT-------
T ss_pred cHHHHHHHHHHHHHHHHHcCCeEEEEEeccccccccCCCCCHHHHHHHHHhhhhhcccccccccccccccccc-------
Confidence 555555555566788999999888742 111 11 12234444556555443333221
Q ss_pred cccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCC
Q 015784 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260 (400)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~ 260 (400)
.......+..+...++... ..+.+-+.-.. ....+.....+++.+++.|+++.+|++|......
T Consensus 145 ----~~~~~~~~~~~~~~~~~~~--~vvG~dl~g~E-~~~~~~~~~~~~~~a~~~gl~~t~HaGE~~~~~~--------- 208 (331)
T PF00962_consen 145 ----FPDEWAEEIVELASKYPDK--GVVGFDLAGDE-DGGPPLKFAPAFRKAREAGLKLTVHAGETGGPEH--------- 208 (331)
T ss_dssp ----STHHHHHHHHHHHHHTTTT--TEEEEEEESST-TSTTGGGHHHHHHHHHHTT-EEEEEESSSSTHHH---------
T ss_pred ----chHHHHHHHHHHHhhcccc--eEEEEEecCCc-ccCchHHHHHHHhhhcccceeecceecccCCccc---------
Confidence 1333444455555555542 33443222211 2223334778888999999999999998775211
Q ss_pred CChHHHHhHhCCCCCCeeeEEecCC--ChhHHHHHHhcCCeEEECcccccccc-----CcccHHHHHHcCCcEEEcCCCC
Q 015784 261 HGTVTFLDKIEFLQNNLLSAHTVWV--NHTEIGLLSRAGVKVSHCPASAMRML-----GFAPIKEMLHADICVSLGTDGA 333 (400)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~h~~~~--~~~~i~~~~~~~~~~~~~p~~~~~~~-----~~~~~~~~~~~Gv~v~~gtD~~ 333 (400)
..+.+.. ++. ..+.|+..+ +++.++.+++.++.+.+||.||..+. ...|++.++++|++|+++||.+
T Consensus 209 --~~~ai~~---l~~-~RIgHG~~~~~~p~l~~~~~~~~I~iEvcptSN~~~~~~~~~~~hP~~~~~~~gv~v~i~TDd~ 282 (331)
T PF00962_consen 209 --IRDAILL---LGA-DRIGHGVRLIKDPELLELLAERQIPIEVCPTSNVQLGAVPSYEEHPLRKLLDAGVPVSINTDDP 282 (331)
T ss_dssp --HHHHHHT---ST--SEEEE-GGGGGSHHHHHHHHHTT-EEEE-HHHHHHTTSSSTGGG-CHHHHHHTT-EEEE--BSH
T ss_pred --ccchhhh---ccc-eeecchhhhhhhhHHHHHHHHhCCCeeeCCCcCcccceeeecchhHHHHHHHcCCceeccCCCc
Confidence 1122222 222 357999987 46678999999999999999998652 2359999999999999999997
Q ss_pred CCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 015784 334 PSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (400)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~ 388 (400)
.. .+.++..++..+.... ++|.+|..++ ..|+.+...++
T Consensus 283 ~~-~~~~l~~ey~~~~~~~--------------~l~~~~l~~l-~~nsi~~sf~~ 321 (331)
T PF00962_consen 283 GV-FGTTLSDEYYLAAEAF--------------GLSLADLKQL-ARNSIEASFLS 321 (331)
T ss_dssp HH-HT-SHHHHHHHHHHHH--------------T--HHHHHHH-HHHHHHCSSS-
T ss_pred cc-cCCCcHHHHHHHHHHc--------------CCCHHHHHHH-HHHHHHHHcCC
Confidence 43 1234777776665333 3888775554 55676665554
No 124
>cd01310 TatD_DNAse TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.
Probab=99.02 E-value=1.3e-07 Score=82.80 Aligned_cols=137 Identities=14% Similarity=0.102 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEE
Q 015784 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVS 301 (400)
Q Consensus 222 ~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~ 301 (400)
.+.++.+++.|++.+++|.+|+...... ..+.+...+ ....++.|+..-+.+.++++.+.|+.+.
T Consensus 107 ~~~~~~~~~~a~e~~~pv~iH~~~~~~~-------------~~~l~~~~~--~~~~~i~H~~~~~~~~~~~~~~~g~~~~ 171 (251)
T cd01310 107 KEVFRAQLELAKELNLPVVIHSRDAHED-------------VLEILKEYG--PPKRGVFHCFSGSAEEAKELLDLGFYIS 171 (251)
T ss_pred HHHHHHHHHHHHHhCCCeEEEeeCchHH-------------HHHHHHhcC--CCCCEEEEccCCCHHHHHHHHHcCCEEE
Confidence 4678889999999999999998754321 334555554 1335566877655678888888999988
Q ss_pred ECccccccccCcccHHHHHHcC--CcEEEcCCCCCCCCC-----CCHHHHHH-HHHHHhcccccccCCCCCCCCCCHHHH
Q 015784 302 HCPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNNR-----MSIVDEMY-LASLINKGREVFANGTTDPAALPAETV 373 (400)
Q Consensus 302 ~~p~~~~~~~~~~~~~~~~~~G--v~v~~gtD~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~a 373 (400)
+.+..... ...-++.+.+.+ -++.++||+|..... .+....+. ....+. ...+++.+++
T Consensus 172 ~~~~~~~~--~~~~~~~~~~~~~~dril~~TD~p~~~~~~~~~~~~~~~~~~~~~~~la-----------~~~gl~~e~~ 238 (251)
T cd01310 172 ISGIVTFK--NANELREVVKEIPLERLLLETDSPYLAPVPFRGKRNEPAYVKHVAEKIA-----------ELKGISVEEV 238 (251)
T ss_pred eeeeeccC--CCHHHHHHHHhCChHHEEEcccCCCCCCCCCCCCCCCChhHHHHHHHHH-----------HHHCcCHHHH
Confidence 87654221 111245555544 379999998743110 00100011 111111 0135999999
Q ss_pred HHHHhHHHHHHcC
Q 015784 374 LRMATINGAKSVL 386 (400)
Q Consensus 374 l~~~T~~~A~~lg 386 (400)
.++.+.|++++||
T Consensus 239 ~~~~~~N~~~ll~ 251 (251)
T cd01310 239 AEVTTENAKRLFG 251 (251)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999986
No 125
>PRK05451 dihydroorotase; Provisional
Probab=98.97 E-value=1.1e-07 Score=86.93 Aligned_cols=159 Identities=13% Similarity=0.145 Sum_probs=94.5
Q ss_pred CHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChH-HHHh-Hh-CCCCCCeeeEEecCCChhHHHHHHh--
Q 015784 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV-TFLD-KI-EFLQNNLLSAHTVWVNHTEIGLLSR-- 295 (400)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~-~~l~-~~-~~~~~~~~~~h~~~~~~~~i~~~~~-- 295 (400)
+++.+.++++.+.+.|+++.+|+.+......... + ....+ ..+. .. ...+.+..+.|... .+.++.+++
T Consensus 116 dd~~l~~~~e~~~~~g~~V~vHaE~~~~~~~~~~---~-e~~~~~~~l~~lA~~~pg~~lhI~Hlst--~~~~e~i~~a~ 189 (345)
T PRK05451 116 DIEKIYPVLEAMQKLGMPLLVHGEVTDPDIDIFD---R-EAVFIDRVLEPLRRRFPKLKIVFEHITT--KDAVDYVREAN 189 (345)
T ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCccccccc---c-hHHHHHHHHHHHHHhcCCCcEEEEecCc--HHHHHHHHhcC
Confidence 6778999999999999999999875332110000 0 00011 1112 11 22245677777754 444555444
Q ss_pred cCCeEEECccccc----ccc----C-----cc---------cHHHHHHcCCcE-EEcCCCCCCCC--------CCCHHHH
Q 015784 296 AGVKVSHCPASAM----RML----G-----FA---------PIKEMLHADICV-SLGTDGAPSNN--------RMSIVDE 344 (400)
Q Consensus 296 ~~~~~~~~p~~~~----~~~----~-----~~---------~~~~~~~~Gv~v-~~gtD~~~~~~--------~~~~~~~ 344 (400)
.++.+.+||...+ ... + .+ .+.+.+..|... .++|||.|... ..+++..
T Consensus 190 ~~it~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aLw~~l~~G~Id~~i~SDHaP~~~~~K~~~~G~~gi~~~ 269 (345)
T PRK05451 190 DNLAATITPHHLLINRNDMLVGGIRPHLYCLPILKRETHRQALREAATSGNPKFFLGTDSAPHARHAKESACGCAGIFSA 269 (345)
T ss_pred CCEEEEecHHHHhcCHHHHhCCCcCCCeEEeCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCChHHhCCCCCCCchhhH
Confidence 3566778887422 000 1 12 344567789888 89999987521 1123331
Q ss_pred H---HHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccC
Q 015784 345 M---YLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAG 397 (400)
Q Consensus 345 ~---~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G 397 (400)
+ .....+. .. +.++++++++.+.|||++||+..++|+|.+|
T Consensus 270 ~~g~~~~~~~~-----------~~-~~~l~~~v~~~s~nPAkifGl~~~KG~i~~~ 313 (345)
T PRK05451 270 PAALELYAEVF-----------EE-AGALDKLEAFASLNGPDFYGLPRNTDTITLV 313 (345)
T ss_pred HHHHHHHHHHH-----------Hc-CCCHHHHHHHHhHHHHHHhCCCCCCCeEEEE
Confidence 1 1111111 11 2489999999999999999998889999987
No 126
>COG1816 Add Adenosine deaminase [Nucleotide transport and metabolism]
Probab=98.94 E-value=1.5e-07 Score=83.71 Aligned_cols=238 Identities=17% Similarity=0.171 Sum_probs=140.0
Q ss_pred HhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeecc-Cc-------CCHH--------HHHHHHHHcCCeEEEec
Q 015784 105 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA-GG-------QHVS--------EMAKAVELLGLRACLVQ 168 (400)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~-~~-------~~~~--------~~~~~~~~~g~~~~~~~ 168 (400)
+++..+-+...-..+.++.+.-+......++..|+-..-.. .+ ...+ ......++.|++..+..
T Consensus 65 ~fl~~~y~~~~v~~~~~~~~~la~~~~~~~~~~~~vy~Ei~f~p~~~t~~~l~~~~~~e~~~~~~~~~~~~~gi~s~li~ 144 (345)
T COG1816 65 EFLEKYYRGASVLRTEEDFYRLAYEYLEDAAADNVVYAEIRFDPYLHTKRGLSVDTVVEGLIAGFRPAERDFGIHSKLIV 144 (345)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHHHHhcCCeEEEEEeCcchhhhccCCHHHHHHHHHHHHHHHhhccCCccceEE
Confidence 33444433333345666767677777788888898877642 11 1111 12233444455443322
Q ss_pred ccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeecc-ccccCCHHHHHHHHHHHHHcCCeeeEecCCCc
Q 015784 169 STMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIR-QIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (400)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~ 247 (400)
..... ...+......+....+....... .+.. ......++....+++.++++|+.+.+|+.|..
T Consensus 145 ~~~r~-----------~~~e~~~~~~~~a~~~~~~~~~~----~~l~~~e~~~p~~~f~~~f~~~r~~gl~lt~HaGE~~ 209 (345)
T COG1816 145 CLLRH-----------LGFESADEELELALRYRDKLVTG----VGLAGSESGYPPELFVSLFKLARDNGLKLTIHAGEAG 209 (345)
T ss_pred EEEee-----------cCHHHHHHHHHHHhhcccccCcc----CCCCcccccCCHHHHHHHHHHHHHcCceEEEeccccC
Confidence 22211 12222222223233333221111 1211 22445677889999999999999999999654
Q ss_pred hhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC--ChhHHHHHHhcCCeEEECccccccc---c--CcccHHHHH
Q 015784 248 YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV--NHTEIGLLSRAGVKVSHCPASAMRM---L--GFAPIKEML 320 (400)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~--~~~~i~~~~~~~~~~~~~p~~~~~~---~--~~~~~~~~~ 320 (400)
.... ..+.+...+. -.+.|+..+ +++.+.++++.++...+||.||... . ...|+++|+
T Consensus 210 ~~~~-----------i~~al~~~~~----~rI~HGi~~~~d~~L~~~l~~~qI~levCP~SNi~~~~v~~~~~hPf~~~~ 274 (345)
T COG1816 210 GPES-----------IRDALDLLGA----ERIGHGIRAIEDPELLYRLAERQIPLEVCPLSNIQLGVVPSLAKHPFKKLF 274 (345)
T ss_pred CcHH-----------HHHHHHHhch----hhhccccccccCHHHHHHHHHhCCeeEECCcchhhcccccchhhCcHHHHH
Confidence 3211 2233333332 146788875 5677899999999999999999654 2 235999999
Q ss_pred HcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 015784 321 HADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (400)
Q Consensus 321 ~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~ 388 (400)
++|++|+++||.+..++ .++..|...+.... +++.+|+-+++ .|+=+.-+++
T Consensus 275 d~Gv~VsLnTDdp~~f~-~~l~~Ey~~aa~~~--------------~l~~~dl~~~a-rnav~~af~~ 326 (345)
T COG1816 275 DAGVKVSLNTDDPLYFG-TPLIEEYLVAAQIY--------------GLSREDLCELA-RNAVEAAFIS 326 (345)
T ss_pred HcCCceEEcCCChhhcC-CchHHHHHHHHHHh--------------CCCHHHHHHHH-HHHHHHccCC
Confidence 99999999999987633 35677777765443 37777765554 4444444443
No 127
>PLN02599 dihydroorotase
Probab=98.84 E-value=6.7e-07 Score=81.52 Aligned_cols=156 Identities=13% Similarity=0.093 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChH-HHH--hHhCCCCCCeeeEEecCCChhHHHHHHh--c
Q 015784 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV-TFL--DKIEFLQNNLLSAHTVWVNHTEIGLLSR--A 296 (400)
Q Consensus 222 ~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~-~~l--~~~~~~~~~~~~~h~~~~~~~~i~~~~~--~ 296 (400)
.+.+..+++.+++.|+++.+|+............ ....+ +.+ ......+.+..+.|... .+.++.+++ .
T Consensus 135 ~~~l~~~le~~~e~G~~L~vH~E~~~~~~~~~~~----E~~~i~r~l~~~la~~~g~kI~i~HiSt--~~~ve~v~~ak~ 208 (364)
T PLN02599 135 LGKCLPVLEEMAEQGMPLLVHGEVTDPSVDIFDR----EKVFIDTILAPLVQKLPQLKIVMEHITT--MDAVEFVESCGD 208 (364)
T ss_pred HHHHHHHHHHHHhcCCEEEEecCCCccccccccc----HHHHHHHHHHHHHHhccCCeEEEEecCh--HHHHHHHHhccC
Confidence 5789999999999999999999763321111000 00011 122 12233455666677654 333433332 2
Q ss_pred -CCeEEECccccc------c-------c---------cCcccHHHHHHcCCc-EEEcCCCCCCCC--------CCCHHHH
Q 015784 297 -GVKVSHCPASAM------R-------M---------LGFAPIKEMLHADIC-VSLGTDGAPSNN--------RMSIVDE 344 (400)
Q Consensus 297 -~~~~~~~p~~~~------~-------~---------~~~~~~~~~~~~Gv~-v~~gtD~~~~~~--------~~~~~~~ 344 (400)
++.+.+||...+ . . .....+.+.+..|.. +.+||||.|... ...++..
T Consensus 209 ~~vtae~tpHhL~l~~~~~~~~~~~~~~k~~PPlR~~~dr~aL~~al~~G~i~~~i~SDHaPh~~~~K~~~~g~~Gi~~~ 288 (364)
T PLN02599 209 GNVAATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHREALVKAATSGSKKFFLGTDSAPHPKRAKEASCGCAGIYSA 288 (364)
T ss_pred CCEEEEecHHHHhcCHHHHhccCCCCCeEEECCCCCHHHHHHHHHHHHcCCCCEEEecCCCCCChHHhcCCCCCCCcccH
Confidence 577888887422 0 0 011134456677874 899999986411 1112211
Q ss_pred ---HHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccc
Q 015784 345 ---MYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLE 395 (400)
Q Consensus 345 ---~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~ 395 (400)
+-...... .+.+ ++++++++++.|||+++|+..++|+|.
T Consensus 289 ~~~l~~l~~~~-----------~~~g-~l~~l~~~~S~npA~~~gL~~~kg~i~ 330 (364)
T PLN02599 289 PVALSLYAKAF-----------EEAG-ALDKLEAFTSFNGPDFYGLPRNTSTIT 330 (364)
T ss_pred HHHHHHHHHHH-----------HhcC-CHHHHHHHHhHHHHHHhCCCCCCCeEE
Confidence 11111000 1223 789999999999999999975678875
No 128
>PRK10812 putative DNAse; Provisional
Probab=98.65 E-value=5.7e-06 Score=72.37 Aligned_cols=139 Identities=13% Similarity=0.068 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEE
Q 015784 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (400)
Q Consensus 223 e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~ 302 (400)
+.++..+++|++.++||.+|+-....+ .++.+...+.... ..+.|+..-+.+.++.+.+.|..+++
T Consensus 111 ~vf~~ql~lA~e~~~Pv~iH~r~a~~~-------------~l~iL~~~~~~~~-~~v~H~fsG~~~~a~~~~~~G~~is~ 176 (265)
T PRK10812 111 ESFRHHIQIGRELNKPVIVHTRDARAD-------------TLAILREEKVTDC-GGVLHCFTEDRETAGKLLDLGFYISF 176 (265)
T ss_pred HHHHHHHHHHHHhCCCeEEEeeCchHH-------------HHHHHHhhcCCCC-CEEEEeecCCHHHHHHHHHCCCEEEE
Confidence 457888899999999999998654432 4455555433222 34589998778889999999999887
Q ss_pred CccccccccCcccHHHHHHcC--CcEEEcCCCCCCCC-----C-CCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 015784 303 CPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNN-----R-MSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 374 (400)
Q Consensus 303 ~p~~~~~~~~~~~~~~~~~~G--v~v~~gtD~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al 374 (400)
.....+ .....++.+.+.. =++.+.||+|...+ . -.+..-...+..+.. -.+++++++.
T Consensus 177 ~g~~t~--~~~~~~~~~~~~ipldrlLlETD~P~~~p~~~~g~~n~P~~i~~v~~~ia~-----------l~g~~~eei~ 243 (265)
T PRK10812 177 SGIVTF--RNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAV-----------LKGVSVEELA 243 (265)
T ss_pred Ceeeec--CccHHHHHHHHhCChhhEEEecCCCCCCCcCCCCCCCCcHHHHHHHHHHHH-----------HhCCCHHHHH
Confidence 643322 2223456666655 37889999873211 0 011111121122211 1258999999
Q ss_pred HHHhHHHHHHcCCC
Q 015784 375 RMATINGAKSVLWD 388 (400)
Q Consensus 375 ~~~T~~~A~~lg~~ 388 (400)
+..+.|+.++++++
T Consensus 244 ~~~~~N~~~lf~~~ 257 (265)
T PRK10812 244 QVTTDNFARLFHID 257 (265)
T ss_pred HHHHHHHHHHHCCC
Confidence 99999999999985
No 129
>COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only]
Probab=98.64 E-value=7.7e-06 Score=66.62 Aligned_cols=193 Identities=11% Similarity=0.125 Sum_probs=117.3
Q ss_pred HHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEE-eeccccccCCHHHHHHHHHHHH
Q 015784 155 KAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIW-FGIRQIMNATDRLLLETRDMAR 233 (400)
Q Consensus 155 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~l~~~~~~a~ 233 (400)
..+.+.|++.....+.+..+ .|+ + +....+.+..+... .+-+.+. ++.........+.+++-+++|+
T Consensus 57 ~Ra~~~Gl~~~vavGvHPr~--iP~--------e-~~~~l~~L~~~l~~-e~VvAiGEiGLe~~t~~E~evf~~QL~LA~ 124 (254)
T COG1099 57 ERAEKAGLKLKVAVGVHPRA--IPP--------E-LEEVLEELEELLSN-EDVVAIGEIGLEEATDEEKEVFREQLELAR 124 (254)
T ss_pred hhHHhhCceeeEEeccCCCC--CCc--------h-HHHHHHHHHhhccc-CCeeEeeecccccCCHHHHHHHHHHHHHHH
Confidence 55778888888877766654 122 2 33333334433331 1222221 2333322233456888899999
Q ss_pred HcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCe--EEECcccccccc
Q 015784 234 EFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK--VSHCPASAMRML 311 (400)
Q Consensus 234 ~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~--~~~~p~~~~~~~ 311 (400)
+.++|+.+|..........- ..++.+...++.....++.|+ +.+.+..+...+.+ .+++|. ++.
T Consensus 125 e~dvPviVHTPr~nK~e~t~--------~ildi~~~~~l~~~lvvIDH~---N~etv~~vld~e~~vGlTvqPg---Klt 190 (254)
T COG1099 125 ELDVPVIVHTPRRNKKEATS--------KILDILIESGLKPSLVVIDHV---NEETVDEVLDEEFYVGLTVQPG---KLT 190 (254)
T ss_pred HcCCcEEEeCCCCcchhHHH--------HHHHHHHHcCCChhheehhcc---cHHHHHHHHhccceEEEEecCC---cCC
Confidence 99999999997665432211 255777888877777788887 45556666666655 667773 222
Q ss_pred CcccHHHHHHcC-CcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 015784 312 GFAPIKEMLHAD-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLW 387 (400)
Q Consensus 312 ~~~~~~~~~~~G-v~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~ 387 (400)
....+.-..+.| -++.+.||.... ..+++.-.+.+..+. ..|+..+++-+-+-.|+-+++|+
T Consensus 191 ~~eAveIV~ey~~~r~ilnSD~~s~--~sd~lavprtal~m~------------~~gv~~~~i~kV~~~NA~~~~~l 253 (254)
T COG1099 191 VEEAVEIVREYGAERIILNSDAGSA--ASDPLAVPRTALEME------------ERGVGEEEIEKVVRENALSFYGL 253 (254)
T ss_pred HHHHHHHHHHhCcceEEEecccccc--cccchhhhHHHHHHH------------HhcCCHHHHHHHHHHHHHHHhCc
Confidence 222344445556 689999996532 234544455555443 34688999888888888888876
No 130
>PRK11449 putative deoxyribonuclease YjjV; Provisional
Probab=98.63 E-value=5.1e-06 Score=72.45 Aligned_cols=137 Identities=11% Similarity=0.068 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEE
Q 015784 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (400)
Q Consensus 223 e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~ 302 (400)
+.+...+++|.++++||.+|+-+...+ .++.+...+. .+..+.|+..=+.+..+.+.+.|..+++
T Consensus 114 ~vf~~ql~lA~~~~~Pv~iH~r~a~~~-------------~~~il~~~~~--~~~~i~H~fsG~~~~a~~~l~~G~~iS~ 178 (258)
T PRK11449 114 WLLDEQLKLAKRYDLPVILHSRRTHDK-------------LAMHLKRHDL--PRTGVVHGFSGSLQQAERFVQLGYKIGV 178 (258)
T ss_pred HHHHHHHHHHHHhCCCEEEEecCccHH-------------HHHHHHhcCC--CCCeEEEcCCCCHHHHHHHHHCCCEEEe
Confidence 568888899999999999999764432 4455555442 1245789988888999999999999888
Q ss_pred CccccccccCcccHHHHHHc-C-CcEEEcCCCCCCCCC-----CC-HHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 015784 303 CPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNNR-----MS-IVDEMYLASLINKGREVFANGTTDPAALPAETVL 374 (400)
Q Consensus 303 ~p~~~~~~~~~~~~~~~~~~-G-v~v~~gtD~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al 374 (400)
.+...+. ....++++++. . =++.+.||+|-..+. .+ +..-......+.. -.+++++++.
T Consensus 179 ~g~it~~--~~~~~~~~~~~ipldriL~ETD~P~l~p~~~~~~~n~p~~~~~~~~~ia~-----------l~~~~~~el~ 245 (258)
T PRK11449 179 GGTITYP--RASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFDVLCE-----------LRPEPADEIA 245 (258)
T ss_pred Ccccccc--CcHHHHHHHHhCChhhEEEecCCCCCCCCCCCCCCCCChHHHHHHHHHHH-----------HHCcCHHHHH
Confidence 7654332 11123444332 2 268899999742110 01 1111222211111 1248899999
Q ss_pred HHHhHHHHHHcCC
Q 015784 375 RMATINGAKSVLW 387 (400)
Q Consensus 375 ~~~T~~~A~~lg~ 387 (400)
+..+.|..+++|+
T Consensus 246 ~~~~~N~~~lf~~ 258 (258)
T PRK11449 246 EVLLNNTYTLFNV 258 (258)
T ss_pred HHHHHHHHHHhCc
Confidence 9999999998874
No 131
>PF02126 PTE: Phosphotriesterase family; InterPro: IPR001559 Synonym(s): Paraoxonase, A-esterase, Aryltriphosphatase, Phosphotriesterase, Paraoxon hydrolase Bacteria such as Brevundimonas diminuta (Pseudomonas diminuta) harbour a plasmid that carries the gene for Aryldialkylphosphatase (3.1.8.1 from EC) (PTE) (also known as parathion hydrolase). This enzyme has attracted interest because of its potential use in the detoxification of chemical waste and warfare agents and its ability to degrade agricultural pesticides such as parathion. It acts specifically on synthetic organophosphate triesters and phosphorofluoridates. It does not seem to have a natural occuring substrate and may thus have optimally evolved for utilizing paraoxon. Aryldialkylphosphatase belongs to a family [, ] of enzymes that possess a binuclear zinc metal centre at their active site. The two zinc ions are coordinated by six different residues, six of which being histidines. This family so far includes, in addition to the parathion hydrolase, the following proteins: Escherichia coli protein Php, the substrate of which is not yet known. Mycobacterium tuberculosis phosphotriesterase homology protein Rv0230C. Mammalian phosphotriesterase related protein (PTER) (RPR-1). ; GO: 0008270 zinc ion binding, 0016788 hydrolase activity, acting on ester bonds, 0009056 catabolic process; PDB: 3MSR_A 3OVG_D 3K2G_C 1BF6_B 3OQE_A 3C86_A 3SO7_A 2D2G_A 2R1P_A 2D2H_A ....
Probab=98.55 E-value=1.4e-06 Score=77.34 Aligned_cols=234 Identities=11% Similarity=0.048 Sum_probs=134.3
Q ss_pred HHHHHHHHHHHHhcCcceeeccC----cCCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHH
Q 015784 124 YISTLLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAK 199 (400)
Q Consensus 124 ~~~~~~~~~~~l~~GvTt~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (400)
...+...++.+.+.|..++.|+. +..+..+.+.+++.|++.+.+.+++...+ .+......+.++..+ .++++
T Consensus 37 ~~~~~~El~~~k~~Gg~tiVd~T~~g~GRd~~~l~~is~~tGv~II~~TG~y~~~~-~p~~~~~~s~e~la~---~~i~E 112 (308)
T PF02126_consen 37 VEAAVAELKEFKAAGGRTIVDATPIGLGRDVEALREISRRTGVNIIASTGFYKEPF-YPEWVREASVEELAD---LFIRE 112 (308)
T ss_dssp HHHHHHHHHHHHHTTEEEEEE--SGGGTB-HHHHHHHHHHHT-EEEEEEEE-SGGC-SCHHHHTSHHHHHHH---HHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEecCCcccCcCHHHHHHHHHHhCCeEEEeCCCCcccc-CChhhhcCCHHHHHH---HHHHH
Confidence 44555566778889999999964 35678889999999999988887775432 232222222222111 12222
Q ss_pred hcc-C-----CCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCc-hhhhHHhhhcCCCCChHHHHhHhCC
Q 015784 200 HHH-A-----ADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP-YENQVVMDTRKVDHGTVTFLDKIEF 272 (400)
Q Consensus 200 ~~~-~-----~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~ 272 (400)
... . ..+.++...............++.+.+..++.|++|++|+.... ...+ .+++|.+.|+
T Consensus 113 i~~GidgT~ikaG~Ik~~~~~~~it~~E~k~lrAaa~A~~~TG~pI~~H~~~g~~~~~e-----------~~~il~e~Gv 181 (308)
T PF02126_consen 113 IEEGIDGTGIKAGIIKEIGSSNPITPLEEKVLRAAARAHKETGAPISTHTGRGTRMGLE-----------QLDILEEEGV 181 (308)
T ss_dssp HHT-STTSSB-ESEEEEEEBTTBCEHHHHHHHHHHHHHHHHHT-EEEEEESTTGTCHHH-----------HHHHHHHTT-
T ss_pred HHhcCCCCccchhheeEeeccCCCCHHHHHHHHHHHHHHHHhCCeEEEcCCCCCcCHHH-----------HHHHHHHcCC
Confidence 221 1 12344443333222222334678888888889999999997665 2212 5678888898
Q ss_pred CCCCeeeEEecCC-ChhHHHHHHhcCCeEEECccc------c------ccc--cCcccHHHHHHcCC--cEEEcCCCCC-
Q 015784 273 LQNNLLSAHTVWV-NHTEIGLLSRAGVKVSHCPAS------A------MRM--LGFAPIKEMLHADI--CVSLGTDGAP- 334 (400)
Q Consensus 273 ~~~~~~~~h~~~~-~~~~i~~~~~~~~~~~~~p~~------~------~~~--~~~~~~~~~~~~Gv--~v~~gtD~~~- 334 (400)
.-.+.++.|.... +.+.+..+++.|+.+.+--.. . +.. .....+..|.++|. ++.++.|...
T Consensus 182 ~~~rvvigH~D~~~D~~y~~~la~~G~~l~~D~~g~~~~g~~~~~~~~~~~d~~ri~~l~~L~~~Gy~~qIlLS~D~~~k 261 (308)
T PF02126_consen 182 DPSRVVIGHMDRNPDLDYHRELADRGVYLEFDTIGREFSGKDKNPRVGYPPDEERIELLKELIEEGYADQILLSHDIGRK 261 (308)
T ss_dssp -GGGEEETSGGGST-HHHHHHHHHTT-EEEETTTT-B-TTTTTCHSCTTS-HHHHHHHHHHHHHTTTGGGEEE-HHHESE
T ss_pred ChhHeEEeCCCCCCCHHHHHHHHhcCCEEEecCCcccccCcccCccCCCCCHHHHHHHHHHHHHcCCcCcEEEecccccc
Confidence 8889999998853 345678888999998774330 0 000 11235788899985 7999999542
Q ss_pred --C--CC----CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 015784 335 --S--NN----RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385 (400)
Q Consensus 335 --~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~l 385 (400)
. .. +..+. +....... .+.|++.+++=++...||+++|
T Consensus 262 ~~~~~~gg~g~~~~~i--~~~fiP~L-----------~~~Gv~~~~i~~ilv~NP~r~l 307 (308)
T PF02126_consen 262 SRLYRYGGGGYGYIYI--LTRFIPRL-----------KERGVSEEDIDKILVENPARIL 307 (308)
T ss_dssp EGSSSCCHHHHTTTHH--HHTHHHHH-----------HHTTS-HHHHHHHHTHHHHHHH
T ss_pred ccccccCCCCccHHHH--HHHHHHHH-----------HHcCCCHHHHHHHHHHCHHHHc
Confidence 1 00 11111 11111111 1346999999999999999987
No 132
>TIGR00856 pyrC_dimer dihydroorotase, homodimeric type. This homodimeric form of dihydroorotase is less common in microbial genomes than a related dihydroorotase that appears in a complex with aspartyltranscarbamoylase or as a homologous domain in multifunctional proteins of pyrimidine biosynthesis in higher eukaryotes.
Probab=98.55 E-value=1.4e-05 Score=72.79 Aligned_cols=151 Identities=13% Similarity=0.097 Sum_probs=84.1
Q ss_pred CHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChH-HHHhH--hCCCCCCeeeEEecCCChhHHHHHHh--
Q 015784 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV-TFLDK--IEFLQNNLLSAHTVWVNHTEIGLLSR-- 295 (400)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~-~~l~~--~~~~~~~~~~~h~~~~~~~~i~~~~~-- 295 (400)
+++.+..+++.+++.|+++.+|+.+......... +. ...+ ..+.. ....+.+..+.|... .+-++.+++
T Consensus 113 dd~~l~~~~e~~~e~g~~v~vHaEd~~~~i~~~~---~e-~~a~~~~i~~lA~~~~~~~~~i~H~st--~~~~~~i~~a~ 186 (341)
T TIGR00856 113 DIDAIMPVLEAMEKIGLPLLLHGEVTHGDIDIFD---RE-ARFIESVLEPLRQRFPALKVVLEHITT--KDAIDYVEDGN 186 (341)
T ss_pred CHHHHHHHHHHHHHcCCeEEEeecCCCCCccccc---ch-hhhhHHHHHHHHHHccCCeEEEEecCc--HHHHHHHHHcC
Confidence 4478999999999999999999966421111000 00 0011 12222 112344566666654 333444433
Q ss_pred cCCeEEECccccc----cc-c---C-----ccc---------HHHHHHcCCcE-EEcCCCCCCCC----------CCCHH
Q 015784 296 AGVKVSHCPASAM----RM-L---G-----FAP---------IKEMLHADICV-SLGTDGAPSNN----------RMSIV 342 (400)
Q Consensus 296 ~~~~~~~~p~~~~----~~-~---~-----~~~---------~~~~~~~Gv~v-~~gtD~~~~~~----------~~~~~ 342 (400)
..+...+||...+ .. . + .+| +.+.+..|... .++|||.|... ++.-
T Consensus 187 ~~vt~E~~ph~L~l~~~~~~~~~~~~~~k~~PPlR~~~d~~aL~~~l~~G~id~~i~SDHaP~~~~~K~~~~~~~G~~g- 265 (341)
T TIGR00856 187 NRLAATITPQHLMFTRNDLLGGGVNPHLYCLPILKRNIHQQALLELAASGFPKFFLGTDSAPHARHRKESSCGCAGCFS- 265 (341)
T ss_pred CCEEEEEcHHHHhccHHHHhccCCCCceEEeCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCChhHcCCCCCCCCccc-
Confidence 2366778887422 00 1 0 123 34567789888 69999986521 1111
Q ss_pred HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 015784 343 DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (400)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~ 388 (400)
-+......+.. . ..++++++++++.+.|||+++|+.
T Consensus 266 ~e~~l~~~~~~---------~-~~~~~l~~~v~~~s~nPAk~~gl~ 301 (341)
T TIGR00856 266 APTALPSYAEV---------F-EEMNALENLEAFCSDNGPQFYGLP 301 (341)
T ss_pred HHHHHHHHHHH---------H-hcCCCHHHHHHHHhHhHHHHhCCC
Confidence 11111111110 1 124899999999999999999994
No 133
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]
Probab=98.53 E-value=1.3e-05 Score=68.98 Aligned_cols=215 Identities=13% Similarity=0.084 Sum_probs=122.1
Q ss_pred HHHHhcCcceeeccCcCC--HHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeE
Q 015784 132 IELIHSGVTCFAEAGGQH--VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIR 209 (400)
Q Consensus 132 ~~~l~~GvTt~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (400)
..+...|++.+...+... .....+.++... ..+...+++.. . ........+....+.+.. ...+.
T Consensus 24 ~~a~~~gv~~~~~~g~~~~~~~~~~~la~~y~-~v~~~~G~HP~------~-~~~~~~~~~~~l~~~~~~-----~~~vv 90 (256)
T COG0084 24 ARAREAGVKKMVVVGTDLEDFKRALELAEKYP-NVYAAVGVHPL------D-ADEHSEEDLEELEQLAEH-----HPKVV 90 (256)
T ss_pred HHHHHcCCcEEEEeecCHHHHHHHHHHHHhCC-CeEEEEeeCCC------c-cccccHHHHHHHHHHHhc-----CCCeE
Confidence 447778999999877332 334556666655 33322222221 1 111123333344444332 11221
Q ss_pred E--EeeccccccCC------HHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEE
Q 015784 210 I--WFGIRQIMNAT------DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAH 281 (400)
Q Consensus 210 ~--~~~~~~~~~~~------~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h 281 (400)
. =+++...+... .+.++..+++|++.++|+.+|+-+...+ ..++|...+. ....+.|
T Consensus 91 aIGEiGLDy~~~~~~~~~~Q~~~F~~ql~lA~~~~lPviIH~R~A~~d-------------~~~iL~~~~~--~~~gi~H 155 (256)
T COG0084 91 AIGEIGLDYYWDKEPDKERQEEVFEAQLELAKELNLPVIIHTRDAHED-------------TLEILKEEGA--PVGGVLH 155 (256)
T ss_pred EEEecccCccccccccHHHHHHHHHHHHHHHHHcCCCEEEEccccHHH-------------HHHHHHhcCC--CCCEEEE
Confidence 1 13343333222 2457888899999999999999765543 5566666554 3456889
Q ss_pred ecCCChhHHHHHHhcCCeEEECccccccccCcccHHHHHHc-C-CcEEEcCCCCCCCC----C-CC-HHHHHHHHHHHhc
Q 015784 282 TVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNN----R-MS-IVDEMYLASLINK 353 (400)
Q Consensus 282 ~~~~~~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-G-v~v~~gtD~~~~~~----~-~~-~~~~~~~~~~~~~ 353 (400)
|..=+.+..+++.+.|..+++.+...++- -..++++.+. . =++.+=||+|-..+ + .+ +..-...+..+..
T Consensus 156 cFsGs~e~a~~~~d~G~yisisG~itfk~--a~~~~ev~~~iPldrLL~ETDsPyl~P~p~rGkrNeP~~v~~v~~~iAe 233 (256)
T COG0084 156 CFSGSAEEARKLLDLGFYISISGIVTFKN--AEKLREVARELPLDRLLLETDAPYLAPVPYRGKRNEPAYVRHVAEKLAE 233 (256)
T ss_pred ccCCCHHHHHHHHHcCeEEEECceeecCC--cHHHHHHHHhCCHhHeEeccCCCCCCCcCCCCCCCCchHHHHHHHHHHH
Confidence 99989999999999999988887765542 1112222111 1 14668899873211 0 00 1111112222221
Q ss_pred ccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 015784 354 GREVFANGTTDPAALPAETVLRMATINGAKSVLW 387 (400)
Q Consensus 354 ~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~ 387 (400)
-.+++++++.+..|.|.-+++++
T Consensus 234 -----------lk~~~~eeva~~t~~N~~~lf~~ 256 (256)
T COG0084 234 -----------LKGISAEEVAEITTENAKRLFGL 256 (256)
T ss_pred -----------HhCCCHHHHHHHHHHHHHHHhcC
Confidence 12589999999999999888874
No 134
>KOG1097 consensus Adenine deaminase/adenosine deaminase [Nucleotide transport and metabolism]
Probab=98.52 E-value=1.4e-05 Score=71.60 Aligned_cols=228 Identities=17% Similarity=0.182 Sum_probs=130.3
Q ss_pred hhHHHHHHHHHHHHHhcCcceeecc---------CcCC---------HHHHHHHHHHcCCeEEEecccccCCCCCCcccc
Q 015784 121 EDSYISTLLCGIELIHSGVTCFAEA---------GGQH---------VSEMAKAVELLGLRACLVQSTMDCGEGLPASWA 182 (400)
Q Consensus 121 ~~~~~~~~~~~~~~l~~GvTt~~~~---------~~~~---------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 182 (400)
+.++......++.+...||..+-.. .+.. .+...+..+..|+...+-.+++..-
T Consensus 117 ~~~~~~~y~~~eef~~dgVvY~E~Rt~~p~l~~~~G~~t~e~~v~~~~~~~e~~~~~fpI~sklI~~~~R~~-------- 188 (399)
T KOG1097|consen 117 PAFRDYAYEALEEFAEDGVVYLEVRTYPPQLYTADGDITPEDVVAIVIAALEKAKRDFPIKSKLIMCCIRHM-------- 188 (399)
T ss_pred HHHHHHHHHHHHHHHHcCceEEEEEccCchhhhcCCCCCHHHHHHHHHHHHHHHHHhCCCcceEEEeeccCC--------
Confidence 3444445556788888999887643 1101 1122345555666555555544332
Q ss_pred cCCchHHHHHHHHHHHHhccCCCCCeEEEeecccc--ccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCC
Q 015784 183 VRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQI--MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260 (400)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~ 260 (400)
+.+...+...............+ +.+...+. ..-++.....+...+.+.|+.+.+|++|......
T Consensus 189 ---~~e~~~e~v~~~~~~~~~~~~~V-vGidL~G~e~~~~p~~~f~~vl~~~~~~gi~~t~HaGE~~~~~~--------- 255 (399)
T KOG1097|consen 189 ---PPEVAEETVSEAKELNKLFPNFV-VGIDLVGQEDLGGPLSLFLEVLAKAPAKGIHLTFHAGETNGGAS--------- 255 (399)
T ss_pred ---ChHHHHHHHHHHHHHHHhCCCeE-EEEecCCCCCCCCChhhhHHHHHhhhhcCCcEEEEccccCCChH---------
Confidence 22333333333333222222222 22333332 2334456677777777799999999998852111
Q ss_pred CChHH-HHhHhCCCCCCeeeEEecCCChhH--HHHHHhcCCeEEECcccccccc-----CcccHHHHHHcCCcEEEcCCC
Q 015784 261 HGTVT-FLDKIEFLQNNLLSAHTVWVNHTE--IGLLSRAGVKVSHCPASAMRML-----GFAPIKEMLHADICVSLGTDG 332 (400)
Q Consensus 261 ~~~~~-~l~~~~~~~~~~~~~h~~~~~~~~--i~~~~~~~~~~~~~p~~~~~~~-----~~~~~~~~~~~Gv~v~~gtD~ 332 (400)
.++ .++ +++ ...|.|+..+.++. +.++++.++.+.+||.||..+. ...|++++++.|+++.|+||.
T Consensus 256 --~v~~~LD---~l~-~~RIGHG~~l~~dp~L~~~~k~~nI~lEiCP~SN~vl~~v~d~rnhp~~~~~~~~vP~vI~sDD 329 (399)
T KOG1097|consen 256 --VVKNALD---LLG-TERIGHGYFLTKDPELINLLKSRNIALEICPISNQVLGLVSDLRNHPVARLLAAGVPVVINSDD 329 (399)
T ss_pred --HHHHHHH---hhC-CccccCceeccCCHHHHHHHHhcCceEEEccchhhheeccccccccHHHHHHhCCCCEEEeCCC
Confidence 222 223 222 35679999986544 9999999999999999998652 235899999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 015784 333 APSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (400)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~ 388 (400)
|...++..+-.+...+..-. .. +++.++..++ ..|..+..-++
T Consensus 330 P~~f~~~~Lt~dfy~A~~~~-----------~~-~~~~~~l~~l-a~nai~~S~l~ 372 (399)
T KOG1097|consen 330 PGFFGAAPLTLDFYLAFLGI-----------AP-NLDLRELKRL-ALNAIKYSFLS 372 (399)
T ss_pred cccccCccccHHHHHHHHhc-----------cc-cCCHHHHHHH-HHHHhhhccCC
Confidence 86533332232233322111 11 4677665554 45565554443
No 135
>COG1735 Php Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=98.49 E-value=4.6e-05 Score=65.57 Aligned_cols=274 Identities=15% Similarity=0.082 Sum_probs=153.6
Q ss_pred cccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC----cCCHHHHHHH
Q 015784 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG----GQHVSEMAKA 156 (400)
Q Consensus 81 G~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~----~~~~~~~~~~ 156 (400)
|+..+|=|+.... .|.....++ ..+...+.+.........+.+.|.-|+.|+. +..+..+.+.
T Consensus 17 GvTl~HEHl~~~~-----------~~~~~~~~~--d~~~~~~~~a~~~~e~~~~~a~Gg~TIVD~T~~~~GRdv~~m~~v 83 (316)
T COG1735 17 GVTLMHEHLFIDP-----------YEIAGGLKN--DPYDEDDEVALAIAELKRLMARGGQTIVDATNIGIGRDVLKMRRV 83 (316)
T ss_pred cceeehhhhccch-----------HHHhhcCCC--CcccccHHHHHHHHHHHHHHHcCCCeEeeCCccccCcCHHHHHHH
Confidence 7888899986532 111111111 2233344455566667778889999999864 3567889999
Q ss_pred HHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHH-HHHhccC------CCCCeEEEeeccccccCCHHHHHHHH
Q 015784 157 VELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKEL-YAKHHHA------ADGRIRIWFGIRQIMNATDRLLLETR 229 (400)
Q Consensus 157 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~e~l~~~~ 229 (400)
+++.|++.+.+.+++.... .+ .|....+ +.+..+. .++.... ..|.++...+....-...++.++.+.
T Consensus 84 s~atglnIV~~TGfy~~~~-~p-~~~~~~~---i~~~ae~~v~ei~~Gi~gT~ikAGiIk~~~~~~~iTp~Eek~lrAaA 158 (316)
T COG1735 84 AEATGLNIVAATGFYKAAF-HP-EYFALRP---IEELAEFVVKEIEEGIAGTGIKAGIIKEAGGSPAITPLEEKSLRAAA 158 (316)
T ss_pred HHHhCCcEEEecccccccc-ch-hHHhhCC---HHHHHHHHHHHHHhcccCCccccceeeeccCcccCCHHHHHHHHHHH
Confidence 9999999988877776543 22 3322222 1222222 2222211 22444443333232233345688888
Q ss_pred HHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecC-CChhH-HHHHHhcCCeEEECccc-
Q 015784 230 DMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVW-VNHTE-IGLLSRAGVKVSHCPAS- 306 (400)
Q Consensus 230 ~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~-~~~~~-i~~~~~~~~~~~~~p~~- 306 (400)
+..++.++|+++|.....-..+ ..+++.+.|+.-.+.++.|+.. .++.. .+.++.+|+.+.+--..
T Consensus 159 ~A~~~Tg~Pi~tHt~~gt~g~e-----------q~~il~~egvdl~~v~igH~d~n~dd~~y~~~l~~~Ga~l~fD~iG~ 227 (316)
T COG1735 159 RAHKETGAPISTHTPAGTMGLE-----------QLRILAEEGVDLRKVSIGHMDPNTDDVYYQKKLADRGAFLEFDRIGK 227 (316)
T ss_pred HHhhhcCCCeEEeccchhhhHH-----------HHHHHHHcCCChhHeeEeccCCCCChHHHHHHHHhcCceEEecccCc
Confidence 8888899999999876552211 5677888887777889999984 33333 46677778886653221
Q ss_pred -cccc--cCcccHHHHHHcCC--cEEEcCCCCCCCCCCCHHHHHHHHHHHhccc--ccccCCC---CCCCCCCHHHHHHH
Q 015784 307 -AMRM--LGFAPIKEMLHADI--CVSLGTDGAPSNNRMSIVDEMYLASLINKGR--EVFANGT---TDPAALPAETVLRM 376 (400)
Q Consensus 307 -~~~~--~~~~~~~~~~~~Gv--~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~l~~~~al~~ 376 (400)
.+.. ....++.++.+.|+ ++.++-|..... .+.+. .......... ....+.+ ..+.|++-+.+=++
T Consensus 228 d~y~pd~~r~~~~~~l~~~gy~d~i~ls~d~~~~~--~~~~~--~~~~~~~~~~g~~~I~~~fIP~Lk~~Gvde~~i~~m 303 (316)
T COG1735 228 DKYYPDEDRIAPLLELVARGYADLILLSHDDICLS--DDVFL--KSMLKANGGWGYGYILNDFIPRLKRHGVDEETIDTM 303 (316)
T ss_pred cccCcHHHhhhhHHHHHHhhHhhheecccchhhhh--hhHHH--HhhhhhcCCcccchhhHhhHHHHHHcCCCHHHHHHH
Confidence 1111 23567888888885 466662322110 00110 0000000000 0000000 12467996667777
Q ss_pred HhHHHHHHcCC
Q 015784 377 ATINGAKSVLW 387 (400)
Q Consensus 377 ~T~~~A~~lg~ 387 (400)
.--||+++|..
T Consensus 304 lvdNP~r~f~~ 314 (316)
T COG1735 304 LVDNPARLFTA 314 (316)
T ss_pred HhhCHHHHhcc
Confidence 78899999864
No 136
>TIGR01431 adm_rel adenosine deaminase-related growth factor. Members of this family have been described as secreted proteins with growth factor activity and regions of adenosine deaminase homology in insects, mollusks, and vertebrates.
Probab=98.49 E-value=0.00011 Score=69.64 Aligned_cols=146 Identities=13% Similarity=0.124 Sum_probs=93.3
Q ss_pred CHHHHHHHHH-HHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC--hhHHHHHHhcC
Q 015784 221 TDRLLLETRD-MAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAG 297 (400)
Q Consensus 221 ~~e~l~~~~~-~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~--~~~i~~~~~~~ 297 (400)
+...+...+. .+++.|+++.+|++|......... .+..+.+ .++ ...|.|+..+. ++.++.+++++
T Consensus 304 pl~~f~~~~~~~~~~~gl~~t~HAGE~~~~g~~~d------~nl~dAI----lLg-~~RIGHG~~l~~~P~l~~~vke~~ 372 (479)
T TIGR01431 304 SLLDFIDALLGPSDKEKLPYFFHAGETNWQGTTVD------ENLIDAL----LLN-TTRIGHGFALVKHPLVLQMLKERN 372 (479)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEecCCcCCCCCCch------hHHHHHH----HcC-CccccCcccccCCHHHHHHHHHhC
Confidence 4555555554 555699999999998763110000 0122222 222 24578999874 78899999999
Q ss_pred CeEEECcccccccc-----CcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHH
Q 015784 298 VKVSHCPASAMRML-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAET 372 (400)
Q Consensus 298 ~~~~~~p~~~~~~~-----~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 372 (400)
+.+.+||.||..+. ...|++.|+++|++|+++||.|.....-++-++...+..... ...++. +
T Consensus 373 I~lEvCP~SN~~l~~v~~~~~HPl~~lla~Gvpv~InSDDP~~~~~t~Ls~ef~~a~~~~~-----------~~~~~l-~ 440 (479)
T TIGR01431 373 IAVEVNPISNQVLQLVADLRNHPCAYLFADNYPMVISSDDPAFWGATPLSHDFYIAFMGLA-----------SAKADL-R 440 (479)
T ss_pred CeEEECccchhhhcccCCcccChHHHHHHCCCcEEEeCCCccccCCCCchHHHHHHHHHhc-----------ccCCCH-H
Confidence 99999999998652 235999999999999999999865332245556555442211 011344 4
Q ss_pred HHHHHhHHHHHHcCCCC
Q 015784 373 VLRMATINGAKSVLWDN 389 (400)
Q Consensus 373 al~~~T~~~A~~lg~~~ 389 (400)
-|+....|+.+..-+++
T Consensus 441 ~L~~la~NSi~~Sfl~~ 457 (479)
T TIGR01431 441 TLKQLALNSIKYSALSE 457 (479)
T ss_pred HHHHHHHHHHHHHCCCH
Confidence 55566666766655543
No 137
>PRK10425 DNase TatD; Provisional
Probab=98.43 E-value=0.00015 Score=63.22 Aligned_cols=139 Identities=12% Similarity=-0.033 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEE
Q 015784 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (400)
Q Consensus 223 e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~ 302 (400)
+.++..+++|+++++|+.+|+-+...+ .++++..... ..+..+.|+..=+.+.++++.+.|..+++
T Consensus 108 ~vF~~ql~lA~~~~~Pv~iH~r~a~~~-------------~l~iL~~~~~-~~~~~i~H~fsG~~~~~~~~l~~G~~~si 173 (258)
T PRK10425 108 RAFVAQLAIAAELNMPVFMHCRDAHER-------------FMALLEPWLD-KLPGAVLHCFTGTREEMQACLARGLYIGI 173 (258)
T ss_pred HHHHHHHHHHHHhCCCeEEEEeCchHH-------------HHHHHHHhcc-CCCCeEEEecCCCHHHHHHHHHCCCEEEE
Confidence 457888899999999999999754432 4455554211 11235679998889999999999999888
Q ss_pred CccccccccCcccHHHHHHc-C-CcEEEcCCCCCCCC-C---------CCHHHHHHHHHHHhcccccccCCCCCCCCCCH
Q 015784 303 CPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNN-R---------MSIVDEMYLASLINKGREVFANGTTDPAALPA 370 (400)
Q Consensus 303 ~p~~~~~~~~~~~~~~~~~~-G-v~v~~gtD~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (400)
.+..... .....++.+.+. . =++.+-||+|-..+ + -.+..-...+..+... .++++
T Consensus 174 ~g~i~~~-~~~~~~~~~~~~ipldrlLlETDaP~l~P~~~~~~~~~~~n~P~~i~~v~~~iA~l-----------~~~~~ 241 (258)
T PRK10425 174 TGWVCDE-RRGLELRELLPLIPAERLLLETDAPYLLPRDLTPKPASRRNEPAFLPHILQRIAHW-----------RGEDA 241 (258)
T ss_pred Cceeecc-cccHHHHHHHHhCChHHEEEeccCCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHH-----------HCcCH
Confidence 7643211 111123333321 1 15778999873211 0 1122222222222221 24899
Q ss_pred HHHHHHHhHHHHHHcCC
Q 015784 371 ETVLRMATINGAKSVLW 387 (400)
Q Consensus 371 ~~al~~~T~~~A~~lg~ 387 (400)
+++.+..+.|.-+++|+
T Consensus 242 ~~v~~~~~~N~~~lf~~ 258 (258)
T PRK10425 242 AWLAATTDANARTLFGL 258 (258)
T ss_pred HHHHHHHHHHHHHHhCc
Confidence 99999999999888874
No 138
>PF01026 TatD_DNase: TatD related DNase The Pfam entry finds members not in the Prosite definition.; InterPro: IPR001130 This family of proteins are related to a large superfamily of metalloenzymes []. TatD, a member of this family has been shown experimentally to be a DNase enzyme []. Allantoinase 3.5.2.5 from EC, N-isopropylammelide isopropyl amidohydrolase 3.5.1 from EC and the SCN1 protein from fission yeast belong to this family.; GO: 0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters; PDB: 3E2V_B 1XWY_A 3GUW_D 3RCM_A 1ZZM_A 2XIO_A 1J6O_A 2GZX_A 3IPW_A 2Y1H_A ....
Probab=98.29 E-value=3.3e-05 Score=67.62 Aligned_cols=214 Identities=13% Similarity=0.100 Sum_probs=118.6
Q ss_pred HHHHhcCcceeeccCcC--CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCe-
Q 015784 132 IELIHSGVTCFAEAGGQ--HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRI- 208 (400)
Q Consensus 132 ~~~l~~GvTt~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 208 (400)
..+.+.|++.+...+.. ......+.+...+.+.....+++.. +.........+...++ ..... ..+
T Consensus 21 ~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~GiHP~-------~~~~~~~~~~~~l~~l-~~~~~---~~~~ 89 (255)
T PF01026_consen 21 ERAREAGVSAIIIVSTDPEDWERVLELASQYPDRVYPALGIHPW-------EAHEVNEEDLEELEEL-INLNR---PKVV 89 (255)
T ss_dssp HHHHHTTEEEEEEEESSHHHHHHHHHHHHHTTTEEEEEE---GG-------GGGGHSHHHHHHHHHH-HHHTS---TTEE
T ss_pred HHHHHcCCCEEEEcCCCHHHhHHHHHHHhcCCCeEEEEecCCcc-------hhhhhhHHHHHHHHHH-HHhcc---ccce
Confidence 55778899999765522 2344556666667666555444432 1111122223333333 11222 222
Q ss_pred EE-Eeeccccc------cCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEE
Q 015784 209 RI-WFGIRQIM------NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAH 281 (400)
Q Consensus 209 ~~-~~~~~~~~------~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h 281 (400)
.+ -++..... ..-.+.+.+.+++|+++++|+.+|+-....+ .++.+...+..+. .++.|
T Consensus 90 aIGEiGLD~~~~~~~~~~~Q~~vF~~ql~lA~~~~~pv~iH~r~a~~~-------------~l~il~~~~~~~~-~~i~H 155 (255)
T PF01026_consen 90 AIGEIGLDYYWRNEEDKEVQEEVFERQLELAKELNLPVSIHCRKAHEE-------------LLEILKEYGPPNL-RVIFH 155 (255)
T ss_dssp EEEEEEEETTTTSSSGHHHHHHHHHHHHHHHHHHTCEEEEEEESHHHH-------------HHHHHHHTTGGTS-EEEET
T ss_pred eeeeeccCcccccCCcHHHHHHHHHHHHHHHHHhCCcEEEecCCcHHH-------------HHHHHHhccccce-eEEEe
Confidence 11 13333211 1223467888899999999999999764332 5566677663222 66789
Q ss_pred ecCCChhHHHHHHhcCCeEEECccccccccCcccHHHHHHc-C-CcEEEcCCCCCC---------CCCCCHHHHHHHHHH
Q 015784 282 TVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPS---------NNRMSIVDEMYLASL 350 (400)
Q Consensus 282 ~~~~~~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-G-v~v~~gtD~~~~---------~~~~~~~~~~~~~~~ 350 (400)
+..-+.+.++.+.+.|..+++.+....+. ....+.+++. + =++.+-||.|-. +....+..-+.....
T Consensus 156 ~f~g~~~~~~~~~~~g~~~S~~~~~~~~~--~~~~~~~~~~ip~drillETD~P~~~~~~~~~~~~~p~~i~~~~~~la~ 233 (255)
T PF01026_consen 156 CFSGSPEEAKKFLDLGCYFSFSGAITFKN--SKKVRELIKAIPLDRILLETDAPYLAPDPYRGKPNEPSNIPKVAQALAE 233 (255)
T ss_dssp T--S-HHHHHHHHHTTEEEEEEGGGGSTT--SHHHHHHHHHS-GGGEEEE-BTTSSECTTSTTSE--GGGHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHhcCceEEecccccccc--cHHHHHHHhcCChhhEEEcCCCCcCCccccCCCCCChHHHHHHHHHHHH
Confidence 98888889999999999988877644321 1123333332 2 268899998621 111222222222222
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 015784 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVL 386 (400)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg 386 (400)
+ .+++++++.+....|..+++|
T Consensus 234 ~--------------~~~~~e~~~~~~~~N~~r~f~ 255 (255)
T PF01026_consen 234 I--------------KGISLEELAQIIYENAKRLFG 255 (255)
T ss_dssp H--------------HTSTHHHHHHHHHHHHHHHHT
T ss_pred H--------------cCCCHHHHHHHHHHHHHHHhC
Confidence 1 148999999999999999876
No 139
>PLN03055 AMP deaminase; Provisional
Probab=97.54 E-value=0.0016 Score=62.39 Aligned_cols=98 Identities=18% Similarity=0.131 Sum_probs=72.7
Q ss_pred eeeEEecCC--ChhHHHHHHhcCCeEEECccccccc-c--CcccHHHHHHcCCcEEEcCCCCCCCCC--CCHHHHHHHHH
Q 015784 277 LLSAHTVWV--NHTEIGLLSRAGVKVSHCPASAMRM-L--GFAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLAS 349 (400)
Q Consensus 277 ~~~~h~~~~--~~~~i~~~~~~~~~~~~~p~~~~~~-~--~~~~~~~~~~~Gv~v~~gtD~~~~~~~--~~~~~~~~~~~ 349 (400)
..|.|+..+ ++..+.+++..++.+.+||.||..+ . ...|++.|++.|++|+++||.+...+. -.+.+|...+.
T Consensus 440 ~RIgHGi~l~~dP~L~yl~~~~qI~LevCPlSN~~l~~~y~~HP~~~~~~~Gl~VSInTDDPl~f~tT~epL~eEY~~aa 519 (602)
T PLN03055 440 HNIAHGNNLRKSPGLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFARGLNVSLSTDDPLQIHLTKEPLVEEYSIAA 519 (602)
T ss_pred ceecCccccCCCHHHHHHHHHcCCeEEEccCcchhhccchhhChHHHHHHCCCEEEEcCCCcchhcCCCCcHHHHHHHHH
Confidence 346888876 4667788889999999999999764 2 245999999999999999999865221 24677777766
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 350 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
... +++..+...+ ..|+.++.++++
T Consensus 520 ~~~--------------~LS~~DL~eL-arNSV~~Sf~~~ 544 (602)
T PLN03055 520 QVW--------------KLSSCDLCEI-ARNSVLQSGFPH 544 (602)
T ss_pred HHh--------------CCCHHHHHHH-HHHHHHHhcCCH
Confidence 443 4888887544 677777776653
No 140
>PRK06361 hypothetical protein; Provisional
Probab=97.49 E-value=0.019 Score=48.68 Aligned_cols=200 Identities=14% Similarity=0.094 Sum_probs=107.6
Q ss_pred CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHH
Q 015784 148 QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLE 227 (400)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~ 227 (400)
..++.+.+.+.+.|+..+.-....... ..........+..+++.... .+.+..+..... ..++.+..
T Consensus 10 ~~~~e~v~~A~~~Gl~~i~iTDH~~~~----------~~~~~~~~~~~~~~~~~~~~--~i~v~~GiE~~~-~~~~~~~~ 76 (212)
T PRK06361 10 LIPSELVRRARVLGYRAIAITDHADAS----------NLEEILEKLVRAAEELELYW--DIEVIPGVELTH-VPPKLIPK 76 (212)
T ss_pred CCHHHHHHHHHHcCCCEEEEecCCCCc----------cHHHHHHHHHHHHHHHhhcC--CCEEEEEEEEcc-cCchhhch
Confidence 446677777777777764432221110 01111122222223332221 355555553322 33445666
Q ss_pred HHHHHHHcCCe-eeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccc
Q 015784 228 TRDMAREFKTG-IHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPAS 306 (400)
Q Consensus 228 ~~~~a~~~~~~-v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~ 306 (400)
..+...+.+.. +.+|-. ...... .. . ..... ...+. -.++.|...+..+.++.+++.++.+.++...
T Consensus 77 ~~~~~~~~~~~~~svH~~-~~~~~~-~~-----~-~~~~a-~~~~~---~dvlaHpd~~~~~~~~~~~~~~~~lEin~~~ 144 (212)
T PRK06361 77 LAKKARDLGAEIVVVHGE-TIVEPV-EE-----G-TNLAA-IECED---VDILAHPGLITEEEAELAAENGVFLEITARK 144 (212)
T ss_pred HHHHHHHCCCEEEEECCC-Ccchhh-hh-----h-hHHHH-HhCCC---CcEecCcchhhHHHHHHHHHcCeEEEEECCC
Confidence 66666676666 567722 111000 00 0 01111 12222 2567788777788899999999998876422
Q ss_pred cccccCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 015784 307 AMRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 386 (400)
Q Consensus 307 ~~~~~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg 386 (400)
.........++.+.+.|+++++|||.... .++. .+..+..+. ...+++.++++.+.+.||+.+|+
T Consensus 145 ~~~~~~~~~l~~a~~~gi~vv~~SDaH~~---~d~~-~~~~~~~i~-----------~~~gl~~~~v~~~~~~~~~~~~~ 209 (212)
T PRK06361 145 GHSLTNGHVARIAREAGAPLVINTDTHAP---SDLI-TYEFARKVA-----------LGAGLTEKELEEALENNPKLLLK 209 (212)
T ss_pred CcccchHHHHHHHHHhCCcEEEECCCCCH---HHHH-HHHHHHHHH-----------cCCCCCHHHHHHHHHHhHHHHHH
Confidence 21112223456667789999999997532 1232 344333333 35679999999999999999986
Q ss_pred C
Q 015784 387 W 387 (400)
Q Consensus 387 ~ 387 (400)
.
T Consensus 210 ~ 210 (212)
T PRK06361 210 R 210 (212)
T ss_pred h
Confidence 4
No 141
>TIGR01429 AMP_deaminase AMP deaminase. This model describes AMP deaminase, a large, well-conserved eukaryotic protein involved in energy metabolism. Most members of the family have an additional, poorly alignable region of 150 amino acids or more N-terminal to the region included in the model.
Probab=97.49 E-value=0.0019 Score=62.22 Aligned_cols=133 Identities=18% Similarity=0.215 Sum_probs=86.7
Q ss_pred HHHHHHHHHHcCCe---eeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC--hhHHHHHHhcCCe
Q 015784 225 LLETRDMAREFKTG---IHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVK 299 (400)
Q Consensus 225 l~~~~~~a~~~~~~---v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~--~~~i~~~~~~~~~ 299 (400)
|..+=.+-++.|+. +..|++|...... ..+.+ +. -..|.|+..+. +.....+...++.
T Consensus 424 l~~LN~~R~~rGLnt~~LrpHaGEag~~e~-----------l~~A~-----L~-adRIgHGi~l~~dp~L~yl~~~~qI~ 486 (611)
T TIGR01429 424 IMVLNNFRRERGLNTFLLRPHCGEAGSVDH-----------LVSAF-----LT-SHGINHGILLRKVPVLQYLYYLTQIP 486 (611)
T ss_pred HHHHHHHHHHcCCCccceeecCCCCCCHHH-----------HHHHh-----hc-CcccccceecCCCHHHHHHHHHcCCe
Confidence 33333444555665 8899987553211 11111 22 23468998873 4455566789999
Q ss_pred EEECccccccc-cC--cccHHHHHHcCCcEEEcCCCCCCCCC--CCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 015784 300 VSHCPASAMRM-LG--FAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 374 (400)
Q Consensus 300 ~~~~p~~~~~~-~~--~~~~~~~~~~Gv~v~~gtD~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al 374 (400)
+.+||.||... .+ ..|+++|+++|++|+++||.+..... -.+.+|...+.... +++..+..
T Consensus 487 LevCPtSN~~l~~~y~~HP~~~~~~~Gl~VSLsTDDPl~f~~T~epL~EEY~~aa~~~--------------~Ls~~Dl~ 552 (611)
T TIGR01429 487 IAMSPLSNNSLFLEYSKNPLPEYLHKGLNVSLSTDDPLQFHYTKEALMEEYAIAAQVW--------------KLSTCDMC 552 (611)
T ss_pred EEEcCCcchhhccChhhChHHHHHHCCCeEEEcCCCchhhCCCCCcHHHHHHHHHHHh--------------CCCHHHHH
Confidence 99999999754 32 45999999999999999999854221 24677777766443 48887766
Q ss_pred HHHhHHHHHHcCCCC
Q 015784 375 RMATINGAKSVLWDN 389 (400)
Q Consensus 375 ~~~T~~~A~~lg~~~ 389 (400)
.+ ..|+.+..++++
T Consensus 553 eL-arNSV~~S~~~~ 566 (611)
T TIGR01429 553 EL-ARNSVLQSGFEH 566 (611)
T ss_pred HH-HHHHHHHhCCCH
Confidence 65 456666666653
No 142
>cd01319 AMPD AMP deaminase (AMPD) catalyzes the hydrolytic deamination of adensosine monophosphate (AMP) at position 6 of the adenine nucleotide ring. AMPD is a diverse and highly regulated eukaryotic key enzyme of the adenylate catabolic pathway.
Probab=97.37 E-value=0.0034 Score=59.32 Aligned_cols=98 Identities=16% Similarity=0.156 Sum_probs=69.4
Q ss_pred eeeEEecCCC--hhHHHHHHhcCCeEEECccccccc-cC--cccHHHHHHcCCcEEEcCCCCCCCCC--CCHHHHHHHHH
Q 015784 277 LLSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRM-LG--FAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLAS 349 (400)
Q Consensus 277 ~~~~h~~~~~--~~~i~~~~~~~~~~~~~p~~~~~~-~~--~~~~~~~~~~Gv~v~~gtD~~~~~~~--~~~~~~~~~~~ 349 (400)
..|.|+..+. +.....++..++.+.+||.||..+ .+ ..|++.+++.|++|+++||.+...+. -++..|...+.
T Consensus 350 dRIGHGv~l~~dp~L~~l~~~~qI~levCPlSN~~l~~~~~~HP~~~~l~~Gl~VsInTDDPl~f~~t~~~L~eEY~~a~ 429 (496)
T cd01319 350 HGISHGINLRKVPVLQYLYYLTQIGIAMSPLSNNSLFLSYEKNPFPEFFKRGLNVSLSTDDPLQFHFTKEPLMEEYSIAA 429 (496)
T ss_pred cccccccccCCCHHHHHHHHHcCCeEEEecCccHhhhcCcccChHHHHHHCCCeEEEeCCCchhhCCCCCcHHHHHHHHH
Confidence 4478998874 334455567899999999999765 33 46999999999999999999854221 24667776665
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 350 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
... +++.++..+ ...|+.+..++++
T Consensus 430 ~~~--------------~Ls~~Dl~e-LarNSV~~Sf~~~ 454 (496)
T cd01319 430 QVW--------------KLSTCDMCE-LARNSVLQSGFEH 454 (496)
T ss_pred HHc--------------CCCHHHHHH-HHHHHHHHhCCCH
Confidence 433 488877644 4566776666653
No 143
>cd01311 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM). This reaction is part of the protocatechuate (PCA) 4,5-cleavage pathway. PCA is one of the most important intermediate metabolites in the bacterial pathways for various phenolic compounds, including lignin, which is the most abundant aromatic material in nature.
Probab=97.36 E-value=0.052 Score=47.76 Aligned_cols=100 Identities=15% Similarity=0.126 Sum_probs=57.9
Q ss_pred CHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC----------hhHH
Q 015784 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN----------HTEI 290 (400)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~----------~~~i 290 (400)
+.+.+..+++.+.++|+++.+|+..... .. ..+.+... +.+.++.|+.... .+.+
T Consensus 108 ~~~~~~~~~~~~~~~gl~v~~~~~~~~l--~~----------l~~l~~~~---~l~ivldH~G~p~~~~~~~~~~~~~~l 172 (263)
T cd01311 108 NKDELDEIAKRAAELGWHVQVYFDAVDL--PA----------LLPFLQKL---PVAVVIDHFGRPDVTKGVDGAEFAALL 172 (263)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEeCHhhH--HH----------HHHHHHHC---CCCEEEECCCCCCCCCCCCCHhHHHHH
Confidence 6677889999999999999999864322 10 22344444 4578899988643 1223
Q ss_pred HHHHhcCCeEEECcccccc-----ccCcc-cHHHHHHcC-CcEEEcCCCCCC
Q 015784 291 GLLSRAGVKVSHCPASAMR-----MLGFA-PIKEMLHAD-ICVSLGTDGAPS 335 (400)
Q Consensus 291 ~~~~~~~~~~~~~p~~~~~-----~~~~~-~~~~~~~~G-v~v~~gtD~~~~ 335 (400)
+.++..++.+.++-...+. ..... -++.+.+.| =++.+|||+|..
T Consensus 173 ~~l~~pNV~~k~Sg~~~~~~~~~~~~~~~~~~~~~~~~g~dRlmfGSD~P~~ 224 (263)
T cd01311 173 KLIEEGNVWVKVSGPYRLSVKQEAYADVIAFARQIVAAAPDRLVWGTDWPHP 224 (263)
T ss_pred HHHhcCCEEEEecchhhcCCCCCCHHHHHHHHHHHHHhCCCcEEEeCCCCCC
Confidence 4332235554443221110 01111 234444556 478999999854
No 144
>PLN02768 AMP deaminase
Probab=97.27 E-value=0.0031 Score=62.00 Aligned_cols=97 Identities=19% Similarity=0.158 Sum_probs=70.7
Q ss_pred eeEEecCCC--hhHHHHHHhcCCeEEECccccccc-c--CcccHHHHHHcCCcEEEcCCCCCCCCC--CCHHHHHHHHHH
Q 015784 278 LSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRM-L--GFAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLASL 350 (400)
Q Consensus 278 ~~~h~~~~~--~~~i~~~~~~~~~~~~~p~~~~~~-~--~~~~~~~~~~~Gv~v~~gtD~~~~~~~--~~~~~~~~~~~~ 350 (400)
.|.|+..+. +..+.++...++.+.+||.||..+ . ...|+++|+++|++|+++||.+...+. -.+.+|...+..
T Consensus 674 RIgHGv~l~kdP~LqyL~~l~qIgLevCPlSN~~l~~~y~~HPf~~f~~~GL~VSLNTDDPL~fhtT~epL~EEYsvAak 753 (835)
T PLN02768 674 NIAHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAAS 753 (835)
T ss_pred ccCCccccCcCHHHHHHHHHcCCeEEECCCcchhhhcchhhChHHHHHHCCCEEEEcCCCccccCCCCCCHHHHHHHHHH
Confidence 357888863 455567777899999999999865 2 345999999999999999999865322 247788777664
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
.. +++..|..++ +.|+.++.++++
T Consensus 754 ~~--------------~LS~~DL~EL-arNSV~aSff~~ 777 (835)
T PLN02768 754 VW--------------KLSSCDLCEI-ARNSVYQSGFSH 777 (835)
T ss_pred Hh--------------CcCHHHHHHH-HHHHHHHhcCCH
Confidence 43 4888777665 566666666653
No 145
>PF00449 Urease_alpha: Urease alpha-subunit, N-terminal domain; InterPro: IPR011612 Urease (urea amidohydrolase, 3.5.1.5 from EC) catalyses the hydrolysis of urea to form ammonia and carbamate. The subunit composition of urease from different sources varies [], but each holoenzyme consists of four structural domains []: three structural domains and a nickel-binding catalytic domain common to amidohydrolases []. Urease is unique among nickel metalloenzymes in that it catalyses a hydrolysis rather than a redox reaction. In Helicobacter pylori, the gamma and beta domains are fused and called the alpha subunit (IPR008223 from INTERPRO). The catalytic subunit (called beta or B) has the same organisation as the Klebsiella alpha subunit. Jack bean (Canavalia ensiformis) urease has a fused gamma-beta-alpha organisation (IPR008221 from INTERPRO). The N-terminal domain is a composite domain and plays a major trimer stabilising role by contacting the catalytic domain of the symmetry related alpha-subunit []. ; GO: 0009039 urease activity, 0016151 nickel ion binding, 0019627 urea metabolic process; PDB: 3LA4_A 2UBP_C 3UBP_C 1UBP_C 1S3T_C 1IE7_C 4UBP_C 1E9Y_B 1E9Z_B 3QGA_O ....
Probab=97.24 E-value=0.001 Score=48.21 Aligned_cols=49 Identities=24% Similarity=0.449 Sum_probs=34.2
Q ss_pred CCCCCCCCCCC-CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChh
Q 015784 6 SGGGSSSGSLG-SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSAD 58 (400)
Q Consensus 6 ~~~~~~~~~~~-~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~ 58 (400)
.|+++++.... ...+++|+|+.|++.. . +-+++|.|+||+|+.||+...
T Consensus 52 dGMgq~~~~~~~~~lD~VItNa~IiD~~---G-I~KADIGIkdG~I~gIGkAGN 101 (121)
T PF00449_consen 52 DGMGQSSGATRDEALDLVITNALIIDYT---G-IVKADIGIKDGRIVGIGKAGN 101 (121)
T ss_dssp BTTTB-SSSGTTCC-SEEEEEEEEEETT---E-EEEEEEEEETTEEEEEE-EB-
T ss_pred CCCCcCCCCCccccccEEEeCcEEEecC---C-cEEeeEEeeCCEEEEEeccCC
Confidence 34455554433 3679999999999752 3 468899999999999998654
No 146
>PTZ00310 AMP deaminase; Provisional
Probab=97.13 E-value=0.008 Score=62.88 Aligned_cols=98 Identities=18% Similarity=0.181 Sum_probs=73.2
Q ss_pred eeeEEecCC--ChhHHHHHHhcCCeEEECccccccc-c--CcccHHHHHHcCCcEEEcCCCCCCCCC--CCHHHHHHHHH
Q 015784 277 LLSAHTVWV--NHTEIGLLSRAGVKVSHCPASAMRM-L--GFAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLAS 349 (400)
Q Consensus 277 ~~~~h~~~~--~~~~i~~~~~~~~~~~~~p~~~~~~-~--~~~~~~~~~~~Gv~v~~gtD~~~~~~~--~~~~~~~~~~~ 349 (400)
..|.|+..+ ++..+.++...++.+.+||.||..+ . ...|+++|++.|++|+++||.+...+. ..+.+|...+.
T Consensus 1133 ~RIgHGi~l~~dp~L~yl~~l~qI~LevCPlSN~~l~~sy~~hP~~~f~~~Gl~VSLnTDDPl~f~tT~EpL~eEYsiaa 1212 (1453)
T PTZ00310 1133 NSICHGINLRNDPPMQYLYYLAQIGLHVSPLSNNALFLAFLENPFPVFFHRGLNVSLSTDDPLMFHQTQEPLIEEYSIAA 1212 (1453)
T ss_pred ccccchhhhCcCHHHHHHHHHcCCeEEECCCchHhhhhchhhCcHHHHHHCCCEEEECCCCccccCCCcccHHHHHHHHH
Confidence 347899987 3556667888999999999999754 2 346999999999999999999865321 23677777766
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 350 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
... +++.+|..++ ..|+..+.|.+.
T Consensus 1213 ~~~--------------~LS~~Dl~el-arNSV~~SGf~~ 1237 (1453)
T PTZ00310 1213 RVW--------------GLSLNDLCEI-ARNSVLQSGFDA 1237 (1453)
T ss_pred HHh--------------CCCHHHHHHH-HHHHHHHcCCCH
Confidence 443 4888887665 567777888763
No 147
>PTZ00310 AMP deaminase; Provisional
Probab=96.43 E-value=0.02 Score=60.03 Aligned_cols=97 Identities=13% Similarity=0.121 Sum_probs=69.8
Q ss_pred eeEEecCCC-hhHHHHHH-hcCCeEEECcccccccc----CcccHHHHHHcCCcEEEcCCCCCCCCCC--CHHHHHHHHH
Q 015784 278 LSAHTVWVN-HTEIGLLS-RAGVKVSHCPASAMRML----GFAPIKEMLHADICVSLGTDGAPSNNRM--SIVDEMYLAS 349 (400)
Q Consensus 278 ~~~h~~~~~-~~~i~~~~-~~~~~~~~~p~~~~~~~----~~~~~~~~~~~Gv~v~~gtD~~~~~~~~--~~~~~~~~~~ 349 (400)
.|.|+..+. ...+..+. ..++.+.+||.||..+. ...|+++|+++|++|+++||.+...+.- .+.+|...+.
T Consensus 504 RI~HGi~l~d~p~LqyL~~e~qI~LeVCPlSN~~l~v~sy~~HPi~~fl~~GL~VSLNTDDPl~F~tt~EpL~EEY~iaa 583 (1453)
T PTZ00310 504 VITRATSIADYPVLQYLCGLHRVGLTVSPLRDHALSITAYFDHPLPKFLHRCLRVSISTSDPLYFHHHSQPLIEEYATAM 583 (1453)
T ss_pred cccchhccCchHHHHHHHHHcCCeEEECCCcccccCCCchhhCcHHHHHHCCCEEEECCCCccccCCCCccHHHHHHHHH
Confidence 467888764 34455554 88999999999997652 2359999999999999999998653322 4777777766
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 350 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
... +++..|..++ +.|+..+.++++
T Consensus 584 q~~--------------gLS~~DL~eL-arNSV~aSf~~~ 608 (1453)
T PTZ00310 584 KLF--------------SLSPLDTTEL-ARNSVLNSSFPP 608 (1453)
T ss_pred HHh--------------CcCHHHHHHH-HHHHHHHhCCCH
Confidence 443 4888777665 566776666653
No 148
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=95.70 E-value=1.1 Score=39.91 Aligned_cols=147 Identities=13% Similarity=0.054 Sum_probs=81.4
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChH-HHHhHhCCCCCCeeeEEec--CC-ChhHHHHHH
Q 015784 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV-TFLDKIEFLQNNLLSAHTV--WV-NHTEIGLLS 294 (400)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~h~~--~~-~~~~i~~~~ 294 (400)
..++..+..+++.|.++|+++.+|...+......-.. ....-.+ +++.++. +-+.++.|+. .. ..+.+....
T Consensus 140 ~~~~~~~~pi~~~a~~~gvpv~ihtG~~~~~~~~~~~--~~~p~~~~~va~~fP--~l~IVl~H~G~~~p~~~~a~~~a~ 215 (293)
T COG2159 140 YPDDPRLYPIYEAAEELGVPVVIHTGAGPGGAGLEKG--HSDPLYLDDVARKFP--ELKIVLGHMGEDYPWELEAIELAY 215 (293)
T ss_pred CCCChHHHHHHHHHHHcCCCEEEEeCCCCCCcccccC--CCCchHHHHHHHHCC--CCcEEEEecCCCCchhHHHHHHHH
Confidence 3344458999999999999999999875542211000 0000112 3444443 3368999997 32 233333332
Q ss_pred h-cCCeEEECccccccccCcccHHHHHHcC-CcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHH
Q 015784 295 R-AGVKVSHCPASAMRMLGFAPIKEMLHAD-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAET 372 (400)
Q Consensus 295 ~-~~~~~~~~p~~~~~~~~~~~~~~~~~~G-v~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 372 (400)
+ .++.+...-..-..+.. .-++.+.+.+ -++.+|||+|... +...+.... ...++.+.
T Consensus 216 ~~~nvy~d~s~~~~~~~~~-~~~~~~~~~~~dkilFGSD~P~~~----~~~~l~~~~---------------~l~l~~e~ 275 (293)
T COG2159 216 AHPNVYLDTSGVRPKYFAP-PLLEFLKELGPDKILFGSDYPAIH----PEVWLAELD---------------ELGLSEEV 275 (293)
T ss_pred hCCCceeeeeccccccCCh-HHHHHHHhcccCeEEecCCCCCcC----HHHHHHHHH---------------hcCCCHHH
Confidence 2 24443322110000000 2245555533 5899999977442 323333322 22488888
Q ss_pred HHHHHhHHHHHHcCCCC
Q 015784 373 VLRMATINGAKSVLWDN 389 (400)
Q Consensus 373 al~~~T~~~A~~lg~~~ 389 (400)
.-+..=.|+++++|++.
T Consensus 276 k~kiL~~NA~rll~l~~ 292 (293)
T COG2159 276 KEKILGENAARLLGLDP 292 (293)
T ss_pred HHHHHHHhHHHHhCcCC
Confidence 89999999999999864
No 149
>PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily []. The family includes 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase which converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). ACMS can be converted non-enzymatically to quinolate, a potent endogenous excitoxin of neuronal cells which is implicated in the pathogenesis of various neurodegenerative disorders. In the presence of AMCSD, ACMS is converted to AMS, a benign catabolite. 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2QPX_A 4D8L_A 3K4W_I 3IRS_B 4DZI_B 3S4T_G 2GWG_B 3IJ6_A 2DVX_C 2DVT_C ....
Probab=95.36 E-value=0.098 Score=46.09 Aligned_cols=161 Identities=12% Similarity=0.010 Sum_probs=78.1
Q ss_pred eEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC--
Q 015784 208 IRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV-- 285 (400)
Q Consensus 208 ~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~-- 285 (400)
+++..........++.....+.+.|.++|++|.+|+................ ...+.+.++ .+-+.++.|+...
T Consensus 102 v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~H~g~~~~~~~~~~~~~~~--~~~~~~~~~--P~l~ii~~H~G~~~~ 177 (273)
T PF04909_consen 102 VKLHPDLGGFDPDDPRLDDPIFEAAEELGLPVLIHTGMTGFPDAPSDPADPE--ELEELLERF--PDLRIILAHLGGPFP 177 (273)
T ss_dssp EEEESSETTCCTTSGHCHHHHHHHHHHHT-EEEEEESHTHHHHHHHHHHHHH--HHTTHHHHS--TTSEEEESGGGTTHH
T ss_pred eEecCCCCccccccHHHHHHHHHHHHhhccceeeeccccchhhhhHHHHHHH--HHHHHHHHh--cCCeEEEecCcccch
Confidence 4443333333344443345899999999999999975110000000000000 011223332 2347889999986
Q ss_pred ChhH-HHHHHhc-CCeEEECccc----cccc-cCcccHHHHHH-cC-CcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccc
Q 015784 286 NHTE-IGLLSRA-GVKVSHCPAS----AMRM-LGFAPIKEMLH-AD-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGRE 356 (400)
Q Consensus 286 ~~~~-i~~~~~~-~~~~~~~p~~----~~~~-~~~~~~~~~~~-~G-v~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (400)
...+ ++.+.+. ++.+...-.. .... .....+.++++ .| =++.+|||.|... ...............
T Consensus 178 ~~~~~~~l~~~~~nvy~d~s~~~~~~~~~~~~~~~~~l~~~~~~~g~drilfGSD~P~~~----~~~~~~~~~~~~~~~- 252 (273)
T PF04909_consen 178 WWEEALRLLDRFPNVYVDLSGIPPFWYFWPPSFDRPFLRRAVDEFGPDRILFGSDYPHPD----GASPYEYIWEAYFLD- 252 (273)
T ss_dssp HHHHHHHHHHHHTTEEEECHSHHSSEEEETTHHCHHHHHHHHHHHTGGGEEEE--TTSST----HHHHHHHHHHHHHHH-
T ss_pred hHHHHHHHHHhCCcccccccccccccccCcccccHHHHHHHHHHhCCceEEecCCCCCCC----ccccHHHHHHhhhcc-
Confidence 3333 4444443 4544332110 0000 11234455544 34 3899999998552 222222211111000
Q ss_pred cccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 015784 357 VFANGTTDPAALPAETVLRMATINGAKSVLW 387 (400)
Q Consensus 357 ~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~ 387 (400)
.++.++.=+.+-.|+++++|+
T Consensus 253 ----------~l~~~~~~~i~~~NA~rl~~l 273 (273)
T PF04909_consen 253 ----------DLSEEEREKILYDNARRLYGL 273 (273)
T ss_dssp ----------HSSHHHHHHHHTHHHHHHHTC
T ss_pred ----------CCCHHHHHHHHhHhHHHHcCc
Confidence 158999999999999999985
No 150
>KOG3020 consensus TatD-related DNase [Replication, recombination and repair]
Probab=95.05 E-value=2.3 Score=37.57 Aligned_cols=156 Identities=11% Similarity=0.114 Sum_probs=86.4
Q ss_pred HHHhcCcceeeccCcC--CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccC-CchHHHHHHHHHHHHhccCCCCCeE
Q 015784 133 ELIHSGVTCFAEAGGQ--HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVR-TTDDCIQSQKELYAKHHHAADGRIR 209 (400)
Q Consensus 133 ~~l~~GvTt~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (400)
.+...|+.-+...++. ..+...+.+.......+...+++. .+..+|... .++..+.....++.. ... ...+.
T Consensus 40 ~a~~~~v~~~~v~gt~~~d~~~~~~l~~~y~~~v~~t~G~HP---~~~~~~~~~~~~~~~~~~L~~~~~~-~~~-~k~vA 114 (296)
T KOG3020|consen 40 RAVQAGVSKLIVTGTSLKDSKEALELAEKYPGSVYPTFGVHP---HFSQEFSDQSRKEKFLDTLLSIIEN-GFL-PKVVA 114 (296)
T ss_pred HHHhccceEEEEeCCCcchHHHHHHHHhhCCCceeeccCcCC---CcccchhhccchhhHHHHHHHHHhh-ccc-CCeEE
Confidence 3667799999987752 234455556555322222222211 122223222 223345555555544 111 11111
Q ss_pred EE-eeccccc--cCC----HHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEe
Q 015784 210 IW-FGIRQIM--NAT----DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHT 282 (400)
Q Consensus 210 ~~-~~~~~~~--~~~----~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~ 282 (400)
+. ++..... ..+ ...+++-+++|.+..+|+.+|+-....+ .++++.+......+-++.|+
T Consensus 115 iGEcGLD~~r~~~~~~~~Qk~vFekQl~LA~~~~~Pl~iH~r~a~~d-------------~~eIl~~~~~~~~~~vvvHs 181 (296)
T KOG3020|consen 115 IGECGLDYDRLQFSDKEEQKTVFEKQLDLAKRLKLPLFIHCRSAHED-------------LLEILKRFLPECHKKVVVHS 181 (296)
T ss_pred eeccccccchhccCChHHHHHHHHHHHHHHHHccCCeeeechhhhHH-------------HHHHHHHhccccCCceEEEe
Confidence 10 1222111 111 1246777899999999999999764332 55666666544333578999
Q ss_pred cCCChhHHHHHHhcCCeEEECccc
Q 015784 283 VWVNHTEIGLLSRAGVKVSHCPAS 306 (400)
Q Consensus 283 ~~~~~~~i~~~~~~~~~~~~~p~~ 306 (400)
..-+.++++++.+.++.+.+.+.+
T Consensus 182 FtGs~e~~~~~lk~~~yig~~g~~ 205 (296)
T KOG3020|consen 182 FTGSAEEAQKLLKLGLYIGFTGCS 205 (296)
T ss_pred ccCCHHHHHHHHHccEEeccccee
Confidence 999999999999999666655543
No 151
>COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=94.68 E-value=2.7 Score=36.65 Aligned_cols=136 Identities=11% Similarity=0.029 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHH-hHhCCCCCCeeeEEecCCCh---------hHHHH
Q 015784 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFL-DKIEFLQNNLLSAHTVWVNH---------TEIGL 292 (400)
Q Consensus 223 e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~h~~~~~~---------~~i~~ 292 (400)
..+++.++...+.|+.+.++...... ...+ ......+.++++.|+..... +.+.+
T Consensus 124 ~~~r~~~~rL~~~gl~fdl~~~~~ql---------------~~~i~l~~~~Pd~~~VldH~G~p~~~~~~~~~w~~~m~~ 188 (279)
T COG3618 124 PAWRANVERLAKLGLHFDLQVDPHQL---------------PDLIPLALKAPDVNFVLDHCGRPDIKINLEDPWKAALAR 188 (279)
T ss_pred HHHHHHHHHHHhcCCeEEEEeChhhh---------------HHHHHHHhhCCCCCEEeccCCCCCccccccCHHHHHHHH
Confidence 47888889999999998888754332 1111 12223345789999988631 23444
Q ss_pred HHhc-CCeEEECccccccc-----cCcccH-HHHHH-cC-CcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCC
Q 015784 293 LSRA-GVKVSHCPASAMRM-----LGFAPI-KEMLH-AD-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTT 363 (400)
Q Consensus 293 ~~~~-~~~~~~~p~~~~~~-----~~~~~~-~~~~~-~G-v~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (400)
+++. |+.+-..=...+.- ....|+ ..+++ .| -++.+|||+|...-..++ ..+..+...-
T Consensus 189 la~~pNv~~KlSG~~~~~~~~w~~~~v~p~~e~~i~~fg~dR~vfGSdwPv~~l~~~~-~~~~~~~~~~----------- 256 (279)
T COG3618 189 LARRPNVWAKLSGVYAYSDESWTVEDVRPYVEELIELFGWDRFVFGSDWPVTSLESDF-ASWVAATREL----------- 256 (279)
T ss_pred HHhCCCeEEEEeeecccccCCCCHHHHHHHHHHHHHhcCccceEecCCCCcccccCCh-HHHHHHHHHH-----------
Confidence 4443 44433221111111 112233 23333 36 689999999854222222 2222222111
Q ss_pred CCCCCCHHHHHHHHhHHHHHHcCC
Q 015784 364 DPAALPAETVLRMATINGAKSVLW 387 (400)
Q Consensus 364 ~~~~l~~~~al~~~T~~~A~~lg~ 387 (400)
-.+ +..|--+..-.||+++.++
T Consensus 257 -v~~-~~~er~~i~~~NA~rly~~ 278 (279)
T COG3618 257 -VPG-DAAERARILVDNARRLYRL 278 (279)
T ss_pred -cCC-CHHHHHHHHhhCHHHHhCC
Confidence 012 5788888889999988754
No 152
>PF12890 DHOase: Dihydro-orotase-like; InterPro: IPR024403 This entry represents a small family of dihydro-orotase-like proteins from bacteria.
Probab=93.64 E-value=0.02 Score=43.10 Aligned_cols=36 Identities=17% Similarity=0.113 Sum_probs=25.5
Q ss_pred eeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCch
Q 015784 212 FGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 248 (400)
Q Consensus 212 ~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~ 248 (400)
+...+........+.+.++. .+.+..+..||.++.-
T Consensus 55 fsddg~giq~~~lm~eamk~-a~l~~~i~ahceDd~l 90 (142)
T PF12890_consen 55 FSDDGYGIQIQLLMYEAMKK-AELDQEIVAHCEDDEL 90 (142)
T ss_pred EecCCceeeeHHHHHHHHHH-HHcccHHHHhhccccc
Confidence 33334444556678888888 8889999999976643
No 153
>PRK07945 hypothetical protein; Provisional
Probab=92.96 E-value=7.2 Score=35.64 Aligned_cols=47 Identities=17% Similarity=0.102 Sum_probs=31.4
Q ss_pred hhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCC
Q 015784 287 HTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAP 334 (400)
Q Consensus 287 ~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~ 334 (400)
++.++.++++|+.+.+.-.. .+. -...-++.+.+.|+++++|||.-.
T Consensus 248 ~~i~~a~~e~g~~lEINt~~-~r~~P~~~il~~a~e~G~~vtigSDAH~ 295 (335)
T PRK07945 248 EAVFAACREHGTAVEINSRP-ERRDPPTRLLRLALDAGCLFSIDTDAHA 295 (335)
T ss_pred HHHHHHHHHhCCEEEEeCCC-CCCCChHHHHHHHHHcCCeEEecCCCCC
Confidence 34567888889988765322 121 122345778889999999999653
No 154
>PRK00912 ribonuclease P protein component 3; Provisional
Probab=92.77 E-value=0.99 Score=38.97 Aligned_cols=98 Identities=12% Similarity=0.077 Sum_probs=61.1
Q ss_pred ChhHHHHHHhcCCeEEECcccccccc------Ccc----cHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhccc
Q 015784 286 NHTEIGLLSRAGVKVSHCPASAMRML------GFA----PIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGR 355 (400)
Q Consensus 286 ~~~~i~~~~~~~~~~~~~p~~~~~~~------~~~----~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~ 355 (400)
..+.++.++++|+.+.+.-....+.. ... .++...+.|+++.+|||...+..-.++......+.
T Consensus 120 ~~~~~~~a~~~gv~lEIn~s~~~~~~~~~r~~~~~~~~~~~~~~~~~g~piiisSdAh~~~~l~~~~~~~~l~~------ 193 (237)
T PRK00912 120 NHVLAKEAARNNVAIEFNLRDILKSRGGRRARTLSNFRDNLALARKYDFPLVLTSGAMSCYDLRSPREMIALAE------ 193 (237)
T ss_pred CHHHHHHHHHCCeEEEEEchHhhhhcccHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCcccccCCHHHHHHHHH------
Confidence 34667888888988776533211111 112 33555667999999999754422223333333332
Q ss_pred ccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC-CCccccccCc
Q 015784 356 EVFANGTTDPAALPAETVLRMATINGAKSVLWD-NDIGSLEAGK 398 (400)
Q Consensus 356 ~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~-~~~G~i~~G~ 398 (400)
..|++.++++.+.+.+|.+++... .+.+.|..|.
T Consensus 194 ---------~~Gl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 228 (237)
T PRK00912 194 ---------LFGMEEDEALKALSYYPESIIKKNRNRKNYVIEGV 228 (237)
T ss_pred ---------HcCCCHHHHHHHHHHhHHHHHHhhccCCCcccccE
Confidence 335999999999999999988554 3456676664
No 155
>COG1387 HIS2 Histidinol phosphatase and related hydrolases of the PHP family [Amino acid transport and metabolism / General function prediction only]
Probab=91.56 E-value=8.3 Score=33.24 Aligned_cols=62 Identities=11% Similarity=0.064 Sum_probs=36.1
Q ss_pred hhHHHHHHhcCCeEEECccccccccCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHH
Q 015784 287 HTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLA 348 (400)
Q Consensus 287 ~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~ 348 (400)
.+.++.+.+.|+.+.+.-..........-++.+.+.|+.+++|||.-.+.....+......+
T Consensus 150 ~~~~~~~~~~g~aleins~~~~~~~~~~~~~~~~e~G~~~~i~tDaH~~~~lg~~~~~~~~~ 211 (237)
T COG1387 150 EELIELAEKNGKALEINSRPGRLDPNSEILRLARELGVKLAIGTDAHRPGDLGDMYFGVKIA 211 (237)
T ss_pred HHHHHHHHHhCcEEeecCCcCccCchHHHHHHHHHhCCeEEeecCcCChhhcccchHHHHHH
Confidence 35577777788877654221111122334566778899999999975443334444444443
No 156
>COG0418 PyrC Dihydroorotase [Nucleotide transport and metabolism]
Probab=90.65 E-value=1.4 Score=38.53 Aligned_cols=108 Identities=14% Similarity=0.198 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHH-HHhHh--CCCCCCeeeEEecCCChhHHHHHHhcC-
Q 015784 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVT-FLDKI--EFLQNNLLSAHTVWVNHTEIGLLSRAG- 297 (400)
Q Consensus 222 ~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~-~l~~~--~~~~~~~~~~h~~~~~~~~i~~~~~~~- 297 (400)
-+.+..+++..++.|+++.+|-......++.+.+ ...-++ .|..+ .+..-+.+++|+.. .+.++.+++.+
T Consensus 117 ~~~~~pvle~Mq~~gmpLlvHGEvt~~~vDifdr----E~~Fi~~vl~pl~~~fP~LKIV~EHiTT--~dav~~v~~~~~ 190 (344)
T COG0418 117 IEKIYPVLEAMQKIGMPLLVHGEVTDAEVDIFDR----EAAFIESVLEPLRQRFPKLKIVLEHITT--KDAVEYVKDANN 190 (344)
T ss_pred HHHHHHHHHHHHHcCCeEEEecccCCccccchhh----HHHHHHHHHHHHHhhCCcceEEEEEecc--HHHHHHHHhcCc
Confidence 4567788888899999999998776665542221 111222 33222 23334678899876 34455555554
Q ss_pred -CeEEECccccc-----cc-cC----------------cccHHHHHHcC-CcEEEcCCCCCC
Q 015784 298 -VKVSHCPASAM-----RM-LG----------------FAPIKEMLHAD-ICVSLGTDGAPS 335 (400)
Q Consensus 298 -~~~~~~p~~~~-----~~-~~----------------~~~~~~~~~~G-v~v~~gtD~~~~ 335 (400)
+..+++|..-+ .+ .+ ...++.+.-.| -++.+|||+.|.
T Consensus 191 nlaATIT~hHL~~nrnd~l~Ggi~Ph~fClPilKr~~hr~AL~~aa~sg~~kfFlGtDSAPH 252 (344)
T COG0418 191 NLAATITPHHLLLNRNDMLVGGIRPHLFCLPILKRETHREALREAATSGHPKFFLGTDSAPH 252 (344)
T ss_pred ceeeEeehhheeeehhhhhcCCCCcceeeeccccchhhHHHHHHHHhcCCCcEEecCCCCCC
Confidence 66777776532 11 22 12344444455 689999998754
No 157
>cd01301 rDP_like renal dipeptidase (rDP), best studied in mammals and also called membrane or microsomal dipeptidase, is a membrane-bound glycoprotein hydrolyzing dipeptides and is involved in hydrolytic metabolism of penem and carbapenem beta-lactam antibiotics. Although the biological function of the enzyme is still unknown, it has been suggested to play a role in the renal glutathione metabolism.
Probab=84.97 E-value=10 Score=34.23 Aligned_cols=129 Identities=13% Similarity=0.060 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEec---------CCChhHHHHHH
Q 015784 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTV---------WVNHTEIGLLS 294 (400)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~---------~~~~~~i~~~~ 294 (400)
.=+++++.+.+.|+.|.+-........ +.+.. ...+.+++|.. .+++++++.++
T Consensus 155 ~G~~vv~~mn~lGmiiDvSH~s~~~~~--------------dv~~~---s~~PviaSHsn~ral~~h~RNltD~~i~~ia 217 (309)
T cd01301 155 FGKELVREMNRLGIIIDLSHLSERTFW--------------DVLDI---SNAPVIASHSNARALCDHPRNLTDAQLKAIA 217 (309)
T ss_pred HHHHHHHHHHHcCCEEEcCCCCHHHHH--------------HHHHh---cCCCEEEeccChHHhcCCCCCCCHHHHHHHH
Confidence 456777778888988855433222211 11111 12345556644 46889999999
Q ss_pred hcCCeEEECccccccc-cCcccHHHH-------HH-cCC-cEEEcCCCCCCCC---CCCHHHHHHH-HHHHhcccccccC
Q 015784 295 RAGVKVSHCPASAMRM-LGFAPIKEM-------LH-ADI-CVSLGTDGAPSNN---RMSIVDEMYL-ASLINKGREVFAN 360 (400)
Q Consensus 295 ~~~~~~~~~p~~~~~~-~~~~~~~~~-------~~-~Gv-~v~~gtD~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~ 360 (400)
++|-.+-++....+-. .....+..+ .+ .|+ .|++|||.-.... ++.-...+.. ...+.
T Consensus 218 ~~GGvigi~~~~~fl~~~~~~~~~~~~~hi~~i~~l~G~dhVgiGsDfdg~~~~~~gl~~~~~~~~l~~~L~-------- 289 (309)
T cd01301 218 ETGGVIGVNFYPAFLSPGADATLDDVVRHIDYIVDLIGIDHVGLGSDFDGIGGTPGGLEDVSDLPNLTAELL-------- 289 (309)
T ss_pred HcCCEEEEeeeHHHhCCCCCCCHHHHHHHHHHHHHhcCCCeEEECcccCCCCCCccccCCHHHHHHHHHHHH--------
Confidence 9987765543332211 112222222 22 355 5999999642211 1111222222 11111
Q ss_pred CCCCCCCCCHHHHHHHHhHHH
Q 015784 361 GTTDPAALPAETVLRMATING 381 (400)
Q Consensus 361 ~~~~~~~l~~~~al~~~T~~~ 381 (400)
+.|++.+++-+++-.|.
T Consensus 290 ----~rG~s~~~i~~i~g~N~ 306 (309)
T cd01301 290 ----ERGYSEEEIEKIAGGNF 306 (309)
T ss_pred ----HcCCCHHHHHHHHhhch
Confidence 34688888877776654
No 158
>PRK06740 histidinol-phosphatase; Validated
Probab=84.26 E-value=33 Score=31.32 Aligned_cols=44 Identities=11% Similarity=0.200 Sum_probs=28.3
Q ss_pred HHHHHhcCCeEEECccccccc--cCccc----HHHHHHcCCcEEEcCCCC
Q 015784 290 IGLLSRAGVKVSHCPASAMRM--LGFAP----IKEMLHADICVSLGTDGA 333 (400)
Q Consensus 290 i~~~~~~~~~~~~~p~~~~~~--~~~~~----~~~~~~~Gv~v~~gtD~~ 333 (400)
++.+++.|+.+.+.-.+..+- ....| ++.+.+.|+++++|||.-
T Consensus 245 ~~a~~~~g~~lEINt~~~~r~~~~e~yP~~~il~~~~e~Gv~~tlgSDAH 294 (331)
T PRK06740 245 ARALVETNTATEINAGLYYRYPVREMCPSPLFLQVLAKHEVPITLSSDAH 294 (331)
T ss_pred HHHHHHcCCEEEEECccccCCCCCCCCcCHHHHHHHHHCCCeEEEeeCCC
Confidence 366677888877653322221 11223 577788899999999964
No 159
>COG1831 Predicted metal-dependent hydrolase (urease superfamily) [General function prediction only]
Probab=83.71 E-value=29 Score=30.18 Aligned_cols=138 Identities=13% Similarity=0.102 Sum_probs=82.8
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCC
Q 015784 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGV 298 (400)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~ 298 (400)
..+.+.|..+++.|++.+++|..|........- . ...+++...|+-. ..++-|.....- ......|+
T Consensus 141 ~~~n~vl~~a~elA~dvdc~vqLHtes~~~~~~--~-------~i~~~ak~~G~~~-~~VVkHha~p~v---~~~~~~Gi 207 (285)
T COG1831 141 EASNEVLEYAMELAKDVDCAVQLHTESLDEETY--E-------EIAEMAKEAGIKP-YRVVKHHAPPLV---LKCEEVGI 207 (285)
T ss_pred HHHHHHHHHHHHHhhcCCCcEEEecCCCChHHH--H-------HHHHHHHHhCCCc-ceeEeecCCccc---hhhhhcCc
Confidence 445567899999999999999999876554211 1 1235556666633 334455443221 22222455
Q ss_pred eEEECccccccccCcccHHHHHHcCCcEEEcCCCCC----CCCCCCHHHHHHHH-HHHhcccccccCCCCCCCCCCHHHH
Q 015784 299 KVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAP----SNNRMSIVDEMYLA-SLINKGREVFANGTTDPAALPAETV 373 (400)
Q Consensus 299 ~~~~~p~~~~~~~~~~~~~~~~~~Gv~v~~gtD~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~a 373 (400)
..++ |. +...+....+.|-++.+=||+.- ++--+.++.-.+.. ..+.+ ..++.+.+
T Consensus 208 ~pSV-~a------sr~~v~~a~~~g~~FmmETDyIDDp~RpgavL~PktVPrr~~~i~~~------------g~~~ee~v 268 (285)
T COG1831 208 FPSV-PA------SRKNVEDAAELGPRFMMETDYIDDPRRPGAVLGPKTVPRRTREILEK------------GDLTEEDV 268 (285)
T ss_pred CCcc-cc------cHHHHHHHHhcCCceEeecccccCcccCCCcCCccchhHHHHHHHHh------------cCCcHHHH
Confidence 4322 11 22257888899999999999751 11223333223222 22222 23789999
Q ss_pred HHHHhHHHHHHcCCC
Q 015784 374 LRMATINGAKSVLWD 388 (400)
Q Consensus 374 l~~~T~~~A~~lg~~ 388 (400)
-+..-.||.++.|++
T Consensus 269 y~i~~E~pe~VYg~~ 283 (285)
T COG1831 269 YRIHVENPERVYGIE 283 (285)
T ss_pred HHHHHhCHHHHhCcc
Confidence 999999999999985
No 160
>PRK08609 hypothetical protein; Provisional
Probab=83.20 E-value=51 Score=32.71 Aligned_cols=44 Identities=18% Similarity=0.245 Sum_probs=30.3
Q ss_pred HHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCC
Q 015784 290 IGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAP 334 (400)
Q Consensus 290 i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~ 334 (400)
++.+++.|+.+.+.-.+ .+. .....++.+.+.|+++++|||...
T Consensus 485 ~~~a~~~G~~lEINa~~-~r~~~~~~~~~~~~e~Gv~i~igSDAH~ 529 (570)
T PRK08609 485 IELAKETNTALELNANP-NRLDLSAEHLKKAQEAGVKLAINTDAHH 529 (570)
T ss_pred HHHHHHhCCEEEEcCCc-cccCccHHHHHHHHHcCCEEEEECCCCC
Confidence 45557789887765332 222 233456888999999999999643
No 161
>COG1603 RPP1 RNase P/RNase MRP subunit p30 [Translation, ribosomal structure and biogenesis]
Probab=82.64 E-value=24 Score=29.98 Aligned_cols=97 Identities=16% Similarity=0.173 Sum_probs=58.6
Q ss_pred ChhHHHHHHhcCCeEEECccccccccCc----------ccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhccc
Q 015784 286 NHTEIGLLSRAGVKVSHCPASAMRMLGF----------APIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGR 355 (400)
Q Consensus 286 ~~~~i~~~~~~~~~~~~~p~~~~~~~~~----------~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~ 355 (400)
+...++.++++++.+...-...++..+. ..++...+-++++.++||...+.....+.+-+.++..+
T Consensus 115 dh~~a~laa~~~valeisl~~ll~~~g~~Ra~~l~~lr~~lrl~rk~~v~ivvtS~A~s~~elrsP~dv~sl~~~l---- 190 (229)
T COG1603 115 DHVLARLAAEKGVALEISLRPLLRSSGYRRARLLSFLRSLLRLARKYDVPIVVTSDAESPLELRSPRDVISLAKVL---- 190 (229)
T ss_pred cHHHHHHHHhcCceEEEehHHhhccchhHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCChhhhcChhhHHHHHHHh----
Confidence 4566788888888765543322221111 13344455699999999987442233333333333333
Q ss_pred ccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC--CccccccC
Q 015784 356 EVFANGTTDPAALPAETVLRMATINGAKSVLWDN--DIGSLEAG 397 (400)
Q Consensus 356 ~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~--~~G~i~~G 397 (400)
|+...||-.+.+.+|.++|-... +-|.|.+|
T Consensus 191 -----------G~e~~ea~~~~~~~p~~iL~~~~~~~~~~i~~g 223 (229)
T COG1603 191 -----------GLEDDEAKKSLSEYPRLILRNRNRIRDGFIVPG 223 (229)
T ss_pred -----------CCCHHHHHHHHHHhHHHHHHHhhhcCCceEEec
Confidence 48899999999999999996221 22455554
No 162
>COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog [Amino acid transport and metabolism]
Probab=79.75 E-value=45 Score=29.98 Aligned_cols=98 Identities=16% Similarity=0.147 Sum_probs=50.5
Q ss_pred eeEEecCCChhHHHHHHhcCCe--EEECccccccc-cCcccHHH-------HHH-cCC-cEEEcCCCCCCCC---CCCHH
Q 015784 278 LSAHTVWVNHTEIGLLSRAGVK--VSHCPASAMRM-LGFAPIKE-------MLH-ADI-CVSLGTDGAPSNN---RMSIV 342 (400)
Q Consensus 278 ~~~h~~~~~~~~i~~~~~~~~~--~~~~p~~~~~~-~~~~~~~~-------~~~-~Gv-~v~~gtD~~~~~~---~~~~~ 342 (400)
++.|--.+++++++.+++.|-. ++..|..-... ...+.+.. +.+ -|+ .|++|||.-.... ++.-.
T Consensus 196 l~~h~RNl~D~qlkaI~~~gGvIgv~~~~~fl~~~~~~~atldd~v~hI~h~v~~~G~dhVglGsDf~g~~~~p~gled~ 275 (313)
T COG2355 196 LVDHPRNLSDEQLKAIAETGGVIGVNFIPAFLRPGGAARATLDDLVRHIDHFVELVGIDHVGLGSDFDGGTGPPDGLEDV 275 (313)
T ss_pred ccCCCCCCCHHHHHHHHhcCCEEEEEeehhhccCCCCCCCCHHHHHHHHHHHHHhcCcceeEecccccCCCCCchhhcCh
Confidence 3445556788999999998654 33333322210 01122322 222 254 6999999752211 11111
Q ss_pred HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 015784 343 DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 386 (400)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg 386 (400)
..+......- .+.|.+.+++-+.+-.|--|.+.
T Consensus 276 ~~l~~l~~~L-----------~~~G~~e~~i~~i~~~N~lRV~~ 308 (313)
T COG2355 276 GKLPNLTAAL-----------IERGYSEEEIEKIAGENWLRVLK 308 (313)
T ss_pred hHHHHHHHHH-----------HHcCCCHHHHHHHHHHhHHHHHH
Confidence 1111111110 13458888888888888777664
No 163
>COG5016 Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion]
Probab=77.13 E-value=37 Score=31.44 Aligned_cols=104 Identities=11% Similarity=-0.009 Sum_probs=60.0
Q ss_pred HHHHHHhcCcceeeccC----cCCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCC
Q 015784 130 CGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAAD 205 (400)
Q Consensus 130 ~~~~~l~~GvTt~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (400)
..+.+.+.|++.|+.+. ..++....+.+++.|.+. .+..++..++ ...+....++.+++...+.
T Consensus 103 Fv~ka~~nGidvfRiFDAlND~RNl~~ai~a~kk~G~h~-q~~i~YT~sP-----------vHt~e~yv~~akel~~~g~ 170 (472)
T COG5016 103 FVEKAAENGIDVFRIFDALNDVRNLKTAIKAAKKHGAHV-QGTISYTTSP-----------VHTLEYYVELAKELLEMGV 170 (472)
T ss_pred HHHHHHhcCCcEEEechhccchhHHHHHHHHHHhcCcee-EEEEEeccCC-----------cccHHHHHHHHHHHHHcCC
Confidence 44678899999999764 234566678888888854 3444444432 2223334444444444433
Q ss_pred CCeEEEeeccccccCCHHHHHHHHHHHHH-cCCeeeEecCCCch
Q 015784 206 GRIRIWFGIRQIMNATDRLLLETRDMARE-FKTGIHMHVAEIPY 248 (400)
Q Consensus 206 ~~~~~~~~~~~~~~~~~e~l~~~~~~a~~-~~~~v~~H~~~~~~ 248 (400)
+.+ +--.-.-..+|....++++..++ .++++.+|+..+..
T Consensus 171 DSI---ciKDmaGlltP~~ayelVk~iK~~~~~pv~lHtH~TsG 211 (472)
T COG5016 171 DSI---CIKDMAGLLTPYEAYELVKAIKKELPVPVELHTHATSG 211 (472)
T ss_pred CEE---EeecccccCChHHHHHHHHHHHHhcCCeeEEecccccc
Confidence 221 11111234566667777666554 58888888776543
No 164
>KOG2902 consensus Dihydroorotase [Nucleotide transport and metabolism]
Probab=76.70 E-value=47 Score=28.37 Aligned_cols=17 Identities=18% Similarity=0.092 Sum_probs=13.2
Q ss_pred eeecccccCcCCccccc
Q 015784 78 LLPGFVNTHVHTSQQLA 94 (400)
Q Consensus 78 v~PG~iD~H~H~~~~~~ 94 (400)
=+|+.-|+|+|+.+..+
T Consensus 6 ~i~~~~DmHvHlR~g~m 22 (344)
T KOG2902|consen 6 TITQPDDMHVHLRDGDM 22 (344)
T ss_pred ecCCccceeEEeccCCe
Confidence 36889999999976443
No 165
>TIGR01856 hisJ_fam histidinol phosphate phosphatase HisJ family. This model represents the histidinol phosphate phosphatase HisJ of Bacillus subtilis, and related proteins from a number of species within a larger family of phosphatases in the PHP hydrolase family. HisJ catalyzes the penultimate step of histidine biosynthesis but shows no homology to the functionally equivalent sequence in E. coli, a domain of the bifunctional HisB protein. Note, however, that many species have two members and that Clostridium perfringens, predicted not to make histidine, has five members of this family; this family is designated subfamily rather than equivalog to indicate that members may not all act as HisJ.
Probab=75.81 E-value=53 Score=28.57 Aligned_cols=44 Identities=18% Similarity=0.184 Sum_probs=28.9
Q ss_pred HHHHHHhcCCeEEECccccccc--cCcc----cHHHHHHcCCcEEEcCCCC
Q 015784 289 EIGLLSRAGVKVSHCPASAMRM--LGFA----PIKEMLHADICVSLGTDGA 333 (400)
Q Consensus 289 ~i~~~~~~~~~~~~~p~~~~~~--~~~~----~~~~~~~~Gv~v~~gtD~~ 333 (400)
.++.+++.|+.+.+.- +.++. .... -++++.+.|+++++|||.-
T Consensus 190 il~~~~~~g~~lEiNt-~g~r~~~~~~yP~~~il~~~~~~g~~itlgSDAH 239 (253)
T TIGR01856 190 ILKLVASQGKALEFNT-SGLRKPLEEAYPSKELLNLAKELGIPLVLGSDAH 239 (253)
T ss_pred HHHHHHHcCCEEEEEc-HhhcCCCCCCCCCHHHHHHHHHcCCCEEecCCCC
Confidence 3567788888877653 22221 2222 3466778899999999964
No 166
>PRK07328 histidinol-phosphatase; Provisional
Probab=72.35 E-value=68 Score=28.21 Aligned_cols=45 Identities=22% Similarity=0.324 Sum_probs=30.0
Q ss_pred hHHHHHHhcCCeEEECccccccc--cCc----ccHHHHHHcCCcEEEcCCCC
Q 015784 288 TEIGLLSRAGVKVSHCPASAMRM--LGF----APIKEMLHADICVSLGTDGA 333 (400)
Q Consensus 288 ~~i~~~~~~~~~~~~~p~~~~~~--~~~----~~~~~~~~~Gv~v~~gtD~~ 333 (400)
+.++.+++.|+.+.+.-. .++. ... .-++++.+.|+++++|||.-
T Consensus 181 ~il~~~~~~g~~lEiNt~-~~r~~~~~~yp~~~il~~~~~~g~~itigSDAH 231 (269)
T PRK07328 181 EALDVIAAAGLALEVNTA-GLRKPVGEIYPSPALLRACRERGIPVVLGSDAH 231 (269)
T ss_pred HHHHHHHHcCCEEEEEch-hhcCCCCCCCCCHHHHHHHHHcCCCEEEeCCCC
Confidence 346778888988876532 2221 112 23577788899999999964
No 167
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=71.06 E-value=58 Score=27.33 Aligned_cols=77 Identities=13% Similarity=0.008 Sum_probs=51.2
Q ss_pred ccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcC
Q 015784 218 MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAG 297 (400)
Q Consensus 218 ~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~ 297 (400)
...+.+...++.+.+.+.|+++.==...++...+ .++.+.+. -++..+.-+.-++.++.+.+.+.|
T Consensus 15 r~~~~e~a~~~~~al~~~Gi~~iEit~~t~~a~~-----------~i~~l~~~---~~~~~vGAGTVl~~~~a~~a~~aG 80 (204)
T TIGR01182 15 RIDDVDDALPLAKALIEGGLRVLEVTLRTPVALD-----------AIRLLRKE---VPDALIGAGTVLNPEQLRQAVDAG 80 (204)
T ss_pred ecCCHHHHHHHHHHHHHcCCCEEEEeCCCccHHH-----------HHHHHHHH---CCCCEEEEEeCCCHHHHHHHHHcC
Confidence 3457788888888889999885433333333222 22222221 123556667777999999999999
Q ss_pred CeEEECccccc
Q 015784 298 VKVSHCPASAM 308 (400)
Q Consensus 298 ~~~~~~p~~~~ 308 (400)
...++.|..+.
T Consensus 81 A~FivsP~~~~ 91 (204)
T TIGR01182 81 AQFIVSPGLTP 91 (204)
T ss_pred CCEEECCCCCH
Confidence 99999998763
No 168
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=66.79 E-value=76 Score=26.56 Aligned_cols=76 Identities=7% Similarity=-0.024 Sum_probs=50.0
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCC
Q 015784 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGV 298 (400)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~ 298 (400)
..+.+....+.+.+.+.|+++.==...++...+ .++.+... . ++..+.-+.-++.++.+...+.|.
T Consensus 12 ~~~~~~a~~ia~al~~gGi~~iEit~~tp~a~~-----------~I~~l~~~-~--~~~~vGAGTVl~~e~a~~ai~aGA 77 (201)
T PRK06015 12 IDDVEHAVPLARALAAGGLPAIEITLRTPAALD-----------AIRAVAAE-V--EEAIVGAGTILNAKQFEDAAKAGS 77 (201)
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEeCCCccHHH-----------HHHHHHHH-C--CCCEEeeEeCcCHHHHHHHHHcCC
Confidence 457778888888889989884333333333222 22222211 1 235566677779999999999999
Q ss_pred eEEECccccc
Q 015784 299 KVSHCPASAM 308 (400)
Q Consensus 299 ~~~~~p~~~~ 308 (400)
.+.++|..+.
T Consensus 78 ~FivSP~~~~ 87 (201)
T PRK06015 78 RFIVSPGTTQ 87 (201)
T ss_pred CEEECCCCCH
Confidence 9999998653
No 169
>TIGR01496 DHPS dihydropteroate synthase. This model represents dihydropteroate synthase, the enzyme that catalyzes the second to last step in folic acid biosynthesis. The gene is usually designated folP (folic acid biosynthsis) or sul (sulfanilamide resistance). This model represents one branch of the family of pterin-binding enzymes (pfam00809) and of a cluster of dihydropteroate synthase and related enzymes (COG0294). Other members of pfam00809 and COG0294 are represented by TIGR00284.
Probab=65.46 E-value=90 Score=27.31 Aligned_cols=62 Identities=6% Similarity=-0.039 Sum_probs=40.9
Q ss_pred HHHHHHHHHHc-CCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC-ChhHHHHHHhcCCeEEE
Q 015784 225 LLETRDMAREF-KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVKVSH 302 (400)
Q Consensus 225 l~~~~~~a~~~-~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~-~~~~i~~~~~~~~~~~~ 302 (400)
+..+++.+++. ++++.+|...... ++...+.| ..++.|.... +++.++.+++.|+.++.
T Consensus 63 l~~~v~~~~~~~~~plsiDT~~~~v---------------i~~al~~G----~~iINsis~~~~~~~~~l~~~~~~~vV~ 123 (257)
T TIGR01496 63 VVPVIKALRDQPDVPISVDTYRAEV---------------ARAALEAG----ADIINDVSGGQDPAMLEVAAEYGVPLVL 123 (257)
T ss_pred HHHHHHHHHhcCCCeEEEeCCCHHH---------------HHHHHHcC----CCEEEECCCCCCchhHHHHHHcCCcEEE
Confidence 66777777776 9999999864442 22111222 2356776665 56678888888988877
Q ss_pred Ccc
Q 015784 303 CPA 305 (400)
Q Consensus 303 ~p~ 305 (400)
++.
T Consensus 124 m~~ 126 (257)
T TIGR01496 124 MHM 126 (257)
T ss_pred EeC
Confidence 664
No 170
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=65.30 E-value=74 Score=29.46 Aligned_cols=119 Identities=9% Similarity=0.112 Sum_probs=73.4
Q ss_pred cccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhH--HhhhcCC---CCChHHHHhHhCCCCCCeeeEEecCCChhHHH
Q 015784 217 IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV--VMDTRKV---DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIG 291 (400)
Q Consensus 217 ~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~--~~~~~~~---~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~ 291 (400)
......+.+..+.+.+++.|+++.+-+.+....... +...+.. ...-..++...+..+.+.++.-+.+.+.+++.
T Consensus 163 f~g~~~e~l~~L~~~~~~~Gl~~~t~v~d~~~~~~l~~~vd~lkI~s~~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~~ 242 (360)
T PRK12595 163 FQGLGVEGLKILKQVADEYGLAVISEIVNPADVEVALDYVDVIQIGARNMQNFELLKAAGRVNKPVLLKRGLSATIEEFI 242 (360)
T ss_pred ccCCCHHHHHHHHHHHHHcCCCEEEeeCCHHHHHHHHHhCCeEEECcccccCHHHHHHHHccCCcEEEeCCCCCCHHHHH
Confidence 345667889999999999999988877654432211 1222221 11234677888888888898988877877765
Q ss_pred HHH----hcCC-eEEECcc--cccc-----ccCcccHHHHHH-cCCcEEEcCCCCCC
Q 015784 292 LLS----RAGV-KVSHCPA--SAMR-----MLGFAPIKEMLH-ADICVSLGTDGAPS 335 (400)
Q Consensus 292 ~~~----~~~~-~~~~~p~--~~~~-----~~~~~~~~~~~~-~Gv~v~~gtD~~~~ 335 (400)
..+ ..|. .++.|-. +.+. ..+...+..|.+ .+++|.+.+||..+
T Consensus 243 ~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 243 YAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTG 299 (360)
T ss_pred HHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCc
Confidence 544 3343 3555531 1111 022334455555 68999998998743
No 171
>PF01244 Peptidase_M19: Membrane dipeptidase (Peptidase family M19); InterPro: IPR008257 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of peptidases belong to the MEROPS peptidase family M19 (membrane dipeptidase family, clan MJ). The protein fold of the peptidase domain for members of this family resembles that of Klebsiella urease, the type example for clan MJ. Renal dipeptidase (rDP) (3.4.13.19 from EC), also known as microsomal dipeptidase, is a zinc-dependent metalloenzyme that hydrolyzes a wide range of dipeptides. It is involved in renal metabolism of glutathione and its conjugates. It is a homodimeric disulphide-linked glycoprotein attached to the renal brush border microvilli membrane by a GPI-anchor. A glutamate residue has recently been shown [,] to be important for the catalytic activity of rDP. rDP seems to be evolutionary related to hypothetical proteins in the PQQ biosynthesis operons of Acinetobacter calcoaceticus and Klebsiella pneumoniae.; GO: 0008235 metalloexopeptidase activity, 0008239 dipeptidyl-peptidase activity, 0016805 dipeptidase activity, 0006508 proteolysis; PDB: 3NEH_B 2RAG_D 3LU2_A 3B40_A 3LY0_A 3FDG_B 2I5G_B 3S2J_A 3S2N_A 3S2L_A ....
Probab=65.03 E-value=34 Score=31.07 Aligned_cols=93 Identities=13% Similarity=0.090 Sum_probs=46.2
Q ss_pred eEEecCCChhHHHHHHhcCCeEEECccccccc-c--CcccHHHHHH--------cCC-cEEEcCCCCCCC---C---CCC
Q 015784 279 SAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-L--GFAPIKEMLH--------ADI-CVSLGTDGAPSN---N---RMS 340 (400)
Q Consensus 279 ~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~--~~~~~~~~~~--------~Gv-~v~~gtD~~~~~---~---~~~ 340 (400)
+.|.-.+++++++.++++|-.+-++....+-- . ....+..+.+ .|+ .|++|||.-... . ...
T Consensus 208 ~~h~RNltDe~iraia~~GGviGi~~~~~fl~~~~~~~~~~~~~~~Hi~y~~~l~G~dhVgiGsDfdg~~~~~~gl~~~~ 287 (320)
T PF01244_consen 208 CPHPRNLTDEQIRAIAERGGVIGINFYPAFLGDDWDPRASLDDLVDHIDYIVDLVGIDHVGIGSDFDGIDGPPEGLEDPS 287 (320)
T ss_dssp S--TTSB-HHHHHHHHHTT-EEEEESSHHHHSTTHSSG-BHHHHHHHHHHHHHHH-GGGEEEE--BTTTSSHBBTBSSGG
T ss_pred CCCCCCCCHHHHHHHHHCCcEEEEEcchhhhcccccccccHHHHHHHHHHHHHhcCCCeEEECcccCCCCCCCCccCCHH
Confidence 44555678999999999987765554433211 1 2333433332 254 699999963211 1 111
Q ss_pred HHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 015784 341 IVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385 (400)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~l 385 (400)
-+..+... +. +.|++.+++-+.+-.|.-+.+
T Consensus 288 ~~~~l~~~--L~------------~rG~s~~~i~kI~g~N~lRv~ 318 (320)
T PF01244_consen 288 DLPNLTEE--LL------------KRGYSEEDIEKILGGNFLRVL 318 (320)
T ss_dssp GHHHHHHH--HH------------HTTS-HHHHHHHHTHHHHHHH
T ss_pred HHHHHHHH--HH------------HCCCCHHHHHHHHhHhHHHHh
Confidence 12222221 11 235889998888888876665
No 172
>COG4464 CapC Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=63.38 E-value=91 Score=26.28 Aligned_cols=17 Identities=12% Similarity=0.343 Sum_probs=14.0
Q ss_pred HHHHHcCCcEEEcCCCC
Q 015784 317 KEMLHADICVSLGTDGA 333 (400)
Q Consensus 317 ~~~~~~Gv~v~~gtD~~ 333 (400)
-++.++|+.-.++||.-
T Consensus 180 ~~~iE~~L~hFiASDAH 196 (254)
T COG4464 180 LQLIEANLVHFIASDAH 196 (254)
T ss_pred HHHHHcccceeeecccc
Confidence 55789999888999964
No 173
>PRK08392 hypothetical protein; Provisional
Probab=61.59 E-value=99 Score=26.10 Aligned_cols=42 Identities=17% Similarity=0.263 Sum_probs=28.1
Q ss_pred HHHHHhcCCeEEECccccccccCcccHHHHHHcCCcEEEcCCCC
Q 015784 290 IGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGA 333 (400)
Q Consensus 290 i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~Gv~v~~gtD~~ 333 (400)
++.++++|+.+.+.-. .+.-...-++.+.+.|+++++|||.-
T Consensus 143 ~~~~~~~g~~lEiNt~--~~~p~~~~l~~~~~~G~~~~igSDAH 184 (215)
T PRK08392 143 LDLAEAYGKAFEISSR--YRVPDLEFIRECIKRGIKLTFASDAH 184 (215)
T ss_pred HHHHHHhCCEEEEeCC--CCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 5777788888766421 11112223577788999999999964
No 174
>PRK14042 pyruvate carboxylase subunit B; Provisional
Probab=56.52 E-value=2e+02 Score=28.76 Aligned_cols=103 Identities=14% Similarity=-0.004 Sum_probs=58.6
Q ss_pred HHHHHHhcCcceeeccCcC----CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCC
Q 015784 130 CGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAAD 205 (400)
Q Consensus 130 ~~~~~l~~GvTt~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (400)
.++.+.+.|+..++.+... ......+.+++.|......-+ +..++. .+ ++...+..+.+...+.
T Consensus 101 ~v~~a~~~Gidv~Rifd~lnd~~n~~~~i~~~k~~G~~~~~~i~-yt~sp~--------~t---~e~~~~~ak~l~~~Ga 168 (596)
T PRK14042 101 FVKLAVNNGVDVFRVFDALNDARNLKVAIDAIKSHKKHAQGAIC-YTTSPV--------HT---LDNFLELGKKLAEMGC 168 (596)
T ss_pred HHHHHHHcCCCEEEEcccCcchHHHHHHHHHHHHcCCEEEEEEE-ecCCCC--------CC---HHHHHHHHHHHHHcCC
Confidence 4467889999999976422 234557888888886543322 222321 12 2223333444433332
Q ss_pred CCeEEEeeccccccCCHHHHHHHHHHHHH-cCCeeeEecCCCc
Q 015784 206 GRIRIWFGIRQIMNATDRLLLETRDMARE-FKTGIHMHVAEIP 247 (400)
Q Consensus 206 ~~~~~~~~~~~~~~~~~e~l~~~~~~a~~-~~~~v~~H~~~~~ 247 (400)
..+ .-....-...|+...++++..++ .++++.+|+.++.
T Consensus 169 d~I---~IkDtaG~l~P~~v~~lv~alk~~~~ipi~~H~Hnt~ 208 (596)
T PRK14042 169 DSI---AIKDMAGLLTPTVTVELYAGLKQATGLPVHLHSHSTS 208 (596)
T ss_pred CEE---EeCCcccCCCHHHHHHHHHHHHhhcCCEEEEEeCCCC
Confidence 222 22223345677788787777664 4789888887653
No 175
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=53.14 E-value=1.4e+02 Score=25.25 Aligned_cols=78 Identities=10% Similarity=0.053 Sum_probs=51.5
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCC-CCeeeEEecCCChhHHHHHHhcC
Q 015784 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQ-NNLLSAHTVWVNHTEIGLLSRAG 297 (400)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~h~~~~~~~~i~~~~~~~ 297 (400)
..+.+....+.+.+.+.|+++.==...++...+ .++.+... ..+ +...+.-+.-++.++.+...+.|
T Consensus 21 ~~~~~~a~~~~~al~~~Gi~~iEit~~~~~a~~-----------~i~~l~~~-~~~~p~~~vGaGTV~~~~~~~~a~~aG 88 (213)
T PRK06552 21 GESKEEALKISLAVIKGGIKAIEVTYTNPFASE-----------VIKELVEL-YKDDPEVLIGAGTVLDAVTARLAILAG 88 (213)
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEECCCccHHH-----------HHHHHHHH-cCCCCCeEEeeeeCCCHHHHHHHHHcC
Confidence 447788888889999999885433333333222 22222221 111 23566677777999999999999
Q ss_pred CeEEECccccc
Q 015784 298 VKVSHCPASAM 308 (400)
Q Consensus 298 ~~~~~~p~~~~ 308 (400)
..+.+.|..+.
T Consensus 89 A~FivsP~~~~ 99 (213)
T PRK06552 89 AQFIVSPSFNR 99 (213)
T ss_pred CCEEECCCCCH
Confidence 99999998753
No 176
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=50.96 E-value=1.7e+02 Score=25.62 Aligned_cols=114 Identities=12% Similarity=0.107 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHcCCeeeEecCCCchhhh--HHhhhcCC---CCChHHHHhHhCCCCCCeeeEEecCCChhHHHH----
Q 015784 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQ--VVMDTRKV---DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGL---- 292 (400)
Q Consensus 222 ~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~--~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~---- 292 (400)
.+.++.+.+.+++.|+++..-..+...... .+...+.. ...-..++...+..+.+.++.-+...+.+++..
T Consensus 75 ~~gl~~l~~~~~~~Gl~~~t~~~d~~~~~~l~~~~d~lkI~s~~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~ 154 (260)
T TIGR01361 75 EEGLKLLRRAADEHGLPVVTEVMDPRDVEIVAEYADILQIGARNMQNFELLKEVGKQGKPVLLKRGMGNTIEEWLYAAEY 154 (260)
T ss_pred HHHHHHHHHHHHHhCCCEEEeeCChhhHHHHHhhCCEEEECcccccCHHHHHHHhcCCCcEEEeCCCCCCHHHHHHHHHH
Confidence 556777777777778777665544333211 11111111 112335667777777788888888877776544
Q ss_pred HHhcCC-eEEECcc--ccc-cc----cCcccHHHHHHc-CCcEEEcCCCCCC
Q 015784 293 LSRAGV-KVSHCPA--SAM-RM----LGFAPIKEMLHA-DICVSLGTDGAPS 335 (400)
Q Consensus 293 ~~~~~~-~~~~~p~--~~~-~~----~~~~~~~~~~~~-Gv~v~~gtD~~~~ 335 (400)
+.+.|. .++.|-. +.+ .. .+...+..|.+. +++|.+-+||..+
T Consensus 155 i~~~Gn~~i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 155 ILSSGNGNVILCERGIRTFEKATRNTLDLSAVPVLKKETHLPIIVDPSHAAG 206 (260)
T ss_pred HHHcCCCcEEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCCC
Confidence 444443 2444332 122 11 223345556553 8999998888643
No 177
>KOG1096 consensus Adenosine monophosphate deaminase [Nucleotide transport and metabolism]
Probab=50.79 E-value=42 Score=33.26 Aligned_cols=75 Identities=20% Similarity=0.311 Sum_probs=48.9
Q ss_pred eEEecCCCh-hHHHHHH-hcCCeEEECccccccc---cCcccHHHHHHcCCcEEEcCCCCCC--CCCCCHHHHHHHHHHH
Q 015784 279 SAHTVWVNH-TEIGLLS-RAGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPS--NNRMSIVDEMYLASLI 351 (400)
Q Consensus 279 ~~h~~~~~~-~~i~~~~-~~~~~~~~~p~~~~~~---~~~~~~~~~~~~Gv~v~~gtD~~~~--~~~~~~~~~~~~~~~~ 351 (400)
+.|+..+.. -.++.+- -..+.+.+.|.+|..+ -...|+.++++.|..|+++||.+.- .+...+..|...|..+
T Consensus 612 Ishg~Llrk~PvLQYLyYL~QIpIamSPLSnnslfl~Y~kNPf~~~f~~GL~VSLSTddpLqf~yTkEPLiEEYSIAAqi 691 (768)
T KOG1096|consen 612 ISHGILLRKVPVLQYLYYLAQIPIAMSPLSNNSLFLSYHKNPFPEYFKRGLNVSLSTDDPLQFHYTKEPLIEEYSIAAQV 691 (768)
T ss_pred ccchhhhccchHHHHHHHHHhcchhhccccccccccccccCchHHHHHhhceeeeccCCchhhhcccchHHHHHHHHHHH
Confidence 577776643 2233321 1246667788887654 3456999999999999999999832 1233456677776666
Q ss_pred hc
Q 015784 352 NK 353 (400)
Q Consensus 352 ~~ 353 (400)
-+
T Consensus 692 yk 693 (768)
T KOG1096|consen 692 YK 693 (768)
T ss_pred Hh
Confidence 55
No 178
>PF01081 Aldolase: KDPG and KHG aldolase; InterPro: IPR000887 4-Hydroxy-2-oxoglutarate aldolase (4.1.3.16 from EC) (KHG-aldolase) catalyzes the interconversion of 4-hydroxy-2-oxoglutarate into pyruvate and glyoxylate. Phospho-2-dehydro-3-deoxygluconate aldolase (4.1.2.14 from EC) (KDPG-aldolase) catalyzes the interconversion of 6-phospho-2-dehydro-3-deoxy-D-gluconate into pyruvate and glyceraldehyde 3-phosphate. These two enzymes are structurally and functionally related []. They are both homotrimeric proteins of approximately 220 amino-acid residues. They are class I aldolases whose catalytic mechanism involves the formation of a Schiff-base intermediate between the substrate and the epsilon-amino group of a lysine residue. In both enzymes, an arginine is required for catalytic activity.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VCR_A 1FQ0_A 1EUN_A 1EUA_B 1FWR_A 2C0A_B 1WBH_A 1WAU_A 2YW3_B 2YW4_A ....
Probab=50.02 E-value=65 Score=26.83 Aligned_cols=92 Identities=14% Similarity=0.028 Sum_probs=49.1
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCC
Q 015784 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGV 298 (400)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~ 298 (400)
..+.+....+.+.+.+.|+++.==...++...+ .++.+... . ++..+.-+.-++.++.+...+.|.
T Consensus 16 ~~~~~~a~~~~~al~~gGi~~iEiT~~t~~a~~-----------~I~~l~~~-~--p~~~vGAGTV~~~e~a~~a~~aGA 81 (196)
T PF01081_consen 16 GDDPEDAVPIAEALIEGGIRAIEITLRTPNALE-----------AIEALRKE-F--PDLLVGAGTVLTAEQAEAAIAAGA 81 (196)
T ss_dssp TSSGGGHHHHHHHHHHTT--EEEEETTSTTHHH-----------HHHHHHHH-H--TTSEEEEES--SHHHHHHHHHHT-
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEecCCccHHH-----------HHHHHHHH-C--CCCeeEEEeccCHHHHHHHHHcCC
Confidence 345566777778888888885333333332222 22222221 1 235566677778999999999999
Q ss_pred eEEECccccccccCcccHHHHHHcCCcEEEc
Q 015784 299 KVSHCPASAMRMLGFAPIKEMLHADICVSLG 329 (400)
Q Consensus 299 ~~~~~p~~~~~~~~~~~~~~~~~~Gv~v~~g 329 (400)
...++|..+.. -++...+.|+++.-|
T Consensus 82 ~FivSP~~~~~-----v~~~~~~~~i~~iPG 107 (196)
T PF01081_consen 82 QFIVSPGFDPE-----VIEYAREYGIPYIPG 107 (196)
T ss_dssp SEEEESS--HH-----HHHHHHHHTSEEEEE
T ss_pred CEEECCCCCHH-----HHHHHHHcCCcccCC
Confidence 99999986632 234444445554443
No 179
>COG0800 Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
Probab=48.65 E-value=1.6e+02 Score=24.78 Aligned_cols=92 Identities=14% Similarity=-0.038 Sum_probs=54.5
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCe
Q 015784 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK 299 (400)
Q Consensus 220 ~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~ 299 (400)
.+.|.-..+.+..-+.|++..==...++...+ .++.+.+. -++.++.-++-+++++++.+.+.|..
T Consensus 22 ~~~e~a~~~a~Ali~gGi~~IEITl~sp~a~e-----------~I~~l~~~---~p~~lIGAGTVL~~~q~~~a~~aGa~ 87 (211)
T COG0800 22 DDVEEALPLAKALIEGGIPAIEITLRTPAALE-----------AIRALAKE---FPEALIGAGTVLNPEQARQAIAAGAQ 87 (211)
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEecCCCCHHH-----------HHHHHHHh---CcccEEccccccCHHHHHHHHHcCCC
Confidence 35566666667777778774322223333222 22222221 11566777888899999999999999
Q ss_pred EEECccccccccCcccHHHHHHcCCcEEEcC
Q 015784 300 VSHCPASAMRMLGFAPIKEMLHADICVSLGT 330 (400)
Q Consensus 300 ~~~~p~~~~~~~~~~~~~~~~~~Gv~v~~gt 330 (400)
.+++|..+.. -++...+.|+++.-|.
T Consensus 88 fiVsP~~~~e-----v~~~a~~~~ip~~PG~ 113 (211)
T COG0800 88 FIVSPGLNPE-----VAKAANRYGIPYIPGV 113 (211)
T ss_pred EEECCCCCHH-----HHHHHHhCCCcccCCC
Confidence 9999987642 2344444454444433
No 180
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=46.37 E-value=2e+02 Score=25.07 Aligned_cols=115 Identities=11% Similarity=0.084 Sum_probs=71.0
Q ss_pred cCC-HHHHHHHHHHHHHcCCeeeEecCCCchhhhH--HhhhcCC---CCChHHHHhHhCCCCCCeeeEEecCCChhHHHH
Q 015784 219 NAT-DRLLLETRDMAREFKTGIHMHVAEIPYENQV--VMDTRKV---DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGL 292 (400)
Q Consensus 219 ~~~-~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~--~~~~~~~---~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~ 292 (400)
... ++-|+-+.+..++.|+++.+.+.+....... ..+.... ...-.++|...+..+.+..+-.+.+++.+++..
T Consensus 55 G~G~eeGL~iL~~vk~~~glpvvTeV~~~~~~~~vae~vDilQIgArn~rn~~LL~a~g~t~kpV~lKrG~~~t~~e~l~ 134 (258)
T TIGR01362 55 GPGLEEGLKILQKVKEEFGVPILTDVHESSQCEPVAEVVDIIQIPAFLCRQTDLLVAAAKTGRIVNVKKGQFLSPWDMKN 134 (258)
T ss_pred CCCHHHHHHHHHHHHHHhCCceEEEeCCHHHHHHHHhhCcEEEeCchhcchHHHHHHHhccCCeEEecCCCcCCHHHHHH
Confidence 345 5667777788888999998888765442221 1122222 223457788888888888888898889888644
Q ss_pred HHh----c-CCeEEECccccc----cc-cCcccHHHHHHcCCcEEEcCCCC
Q 015784 293 LSR----A-GVKVSHCPASAM----RM-LGFAPIKEMLHADICVSLGTDGA 333 (400)
Q Consensus 293 ~~~----~-~~~~~~~p~~~~----~~-~~~~~~~~~~~~Gv~v~~gtD~~ 333 (400)
.++ . +-.++.|-.... ++ .....+..|.+.+.+|.+---|.
T Consensus 135 aaeyi~~~Gn~~viLcERG~tf~y~r~~~D~~~ip~~k~~~~PVi~DpSHs 185 (258)
T TIGR01362 135 VVEKVLSTGNKNILLCERGTSFGYNNLVVDMRSLPIMRELGCPVIFDATHS 185 (258)
T ss_pred HHHHHHHcCCCcEEEEeCCCCcCCCCcccchhhhHHHHhcCCCEEEeCCcc
Confidence 433 3 344776655421 11 23334555666688988865553
No 181
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=44.91 E-value=2.2e+02 Score=25.09 Aligned_cols=117 Identities=10% Similarity=0.127 Sum_probs=68.4
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEecCCCchhhh--HHhhhcCCCC---ChHHHHhHhCCCCCCeeeEEecCCChhHHHHH
Q 015784 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQ--VVMDTRKVDH---GTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLL 293 (400)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~--~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~ 293 (400)
....+.++.+.+.+++.|+++..-..+...... .+...+..+. .-..++...+..+.+.++.-+...+.+++...
T Consensus 74 G~g~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~vd~~kIga~~~~n~~LL~~~a~~gkPV~lk~G~~~s~~e~~~A 153 (266)
T PRK13398 74 GLGEEGLKILKEVGDKYNLPVVTEVMDTRDVEEVADYADMLQIGSRNMQNFELLKEVGKTKKPILLKRGMSATLEEWLYA 153 (266)
T ss_pred CcHHHHHHHHHHHHHHcCCCEEEeeCChhhHHHHHHhCCEEEECcccccCHHHHHHHhcCCCcEEEeCCCCCCHHHHHHH
Confidence 345778999999999999998887765543221 1122222221 22356777777788888888888777665444
Q ss_pred H----hcCC-eEEECcc-----ccccc--cCcccHHHHHHc-CCcEEEcCCCCCC
Q 015784 294 S----RAGV-KVSHCPA-----SAMRM--LGFAPIKEMLHA-DICVSLGTDGAPS 335 (400)
Q Consensus 294 ~----~~~~-~~~~~p~-----~~~~~--~~~~~~~~~~~~-Gv~v~~gtD~~~~ 335 (400)
+ ..|- .+..|-. +++.. .+...+..+.+. +.+|.+-+||..+
T Consensus 154 ~e~i~~~Gn~~i~L~~rG~~t~~~Y~~~~vdl~~i~~lk~~~~~pV~~D~sHs~G 208 (266)
T PRK13398 154 AEYIMSEGNENVVLCERGIRTFETYTRNTLDLAAVAVIKELSHLPIIVDPSHATG 208 (266)
T ss_pred HHHHHhcCCCeEEEEECCCCCCCCCCHHHHHHHHHHHHHhccCCCEEEeCCCccc
Confidence 3 3332 2333322 12221 122334445544 7898887787644
No 182
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=43.77 E-value=80 Score=28.16 Aligned_cols=85 Identities=15% Similarity=0.008 Sum_probs=51.5
Q ss_pred ccCCHHHHHHHHHHHHHcCCeeeEecCCC---chh-hhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHH
Q 015784 218 MNATDRLLLETRDMAREFKTGIHMHVAEI---PYE-NQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLL 293 (400)
Q Consensus 218 ~~~~~e~l~~~~~~a~~~~~~v~~H~~~~---~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~ 293 (400)
...+++.+.++..+|+++|+|+.+--.-. +.. ...+.-.++.+--..-.|.+.|+.+.|+-+.-+ .++.++.+
T Consensus 194 NVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~~NiilC~SLSK~GLPG~R~GIiIa---ne~viqai 270 (417)
T COG3977 194 NVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWNENIILCMSLSKLGLPGSRCGIIIA---NEKVIQAI 270 (417)
T ss_pred CcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccccCCCCEEEEeehhhcCCCCcceeEEEc---cHHHHHHH
Confidence 46788999999999999999987764321 110 011111122111111345677777766654433 56777877
Q ss_pred HhcCCeEEECcc
Q 015784 294 SRAGVKVSHCPA 305 (400)
Q Consensus 294 ~~~~~~~~~~p~ 305 (400)
...+..++..|.
T Consensus 271 tnmn~iisLap~ 282 (417)
T COG3977 271 TNMNGIISLAPG 282 (417)
T ss_pred HhccceeeecCC
Confidence 777877777765
No 183
>PRK07114 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=43.27 E-value=2.1e+02 Score=24.41 Aligned_cols=80 Identities=8% Similarity=-0.026 Sum_probs=51.7
Q ss_pred ccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHh-HhCCCCCCeeeEEecCCChhHHHHHHhc
Q 015784 218 MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLD-KIEFLQNNLLSAHTVWVNHTEIGLLSRA 296 (400)
Q Consensus 218 ~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~h~~~~~~~~i~~~~~~ 296 (400)
...+.+....+.+.+.+.|+++.==...++...+ .++.+. ....-.++.++.-+.-++.++.+...+.
T Consensus 22 r~~~~~~a~~~~~al~~gGi~~iEiT~~tp~a~~-----------~i~~l~~~~~~~~p~~~vGaGTVl~~e~a~~a~~a 90 (222)
T PRK07114 22 YHADVEVAKKVIKACYDGGARVFEFTNRGDFAHE-----------VFAELVKYAAKELPGMILGVGSIVDAATAALYIQL 90 (222)
T ss_pred EcCCHHHHHHHHHHHHHCCCCEEEEeCCCCcHHH-----------HHHHHHHHHHhhCCCeEEeeEeCcCHHHHHHHHHc
Confidence 3457888888999999999885333333333222 222221 1111112456667777899999999999
Q ss_pred CCeEEECccccc
Q 015784 297 GVKVSHCPASAM 308 (400)
Q Consensus 297 ~~~~~~~p~~~~ 308 (400)
|..++++|..+.
T Consensus 91 GA~FiVsP~~~~ 102 (222)
T PRK07114 91 GANFIVTPLFNP 102 (222)
T ss_pred CCCEEECCCCCH
Confidence 999999998753
No 184
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=42.46 E-value=2.3e+02 Score=24.65 Aligned_cols=161 Identities=15% Similarity=0.071 Sum_probs=87.9
Q ss_pred HHhcCcceeeccCcCCHH----HHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeE
Q 015784 134 LIHSGVTCFAEAGGQHVS----EMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIR 209 (400)
Q Consensus 134 ~l~~GvTt~~~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (400)
....|+..+.|....+.. ...++++..++..+-.. ...+...+ ......+....+..+.......+.+.
T Consensus 62 l~~~~i~~vIDATHPfA~~is~na~~a~~~~~ipylR~e---Rp~~~~~~----~~~~~~v~~~~eA~~~l~~~~~~~if 134 (249)
T PF02571_consen 62 LRENGIDAVIDATHPFAAEISQNAIEACRELGIPYLRFE---RPSWQPEP----DDNWHYVDSYEEAAELLKELGGGRIF 134 (249)
T ss_pred HHhCCCcEEEECCCchHHHHHHHHHHHHhhcCcceEEEE---cCCcccCC----CCeEEEeCCHHHHHHHHhhcCCCCEE
Confidence 345799999998755544 34677777776543221 11111000 00111122223333333333324444
Q ss_pred EEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhH
Q 015784 210 IWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE 289 (400)
Q Consensus 210 ~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~ 289 (400)
... ....+..+.. +...+.++.+-+...... ..|+...+.+...+.+-.+.+
T Consensus 135 ltt--------Gsk~L~~f~~-~~~~~~r~~~RvLp~~~~-------------------~~g~~~~~iia~~GPfs~e~n 186 (249)
T PF02571_consen 135 LTT--------GSKNLPPFVP-APLPGERLFARVLPTPES-------------------ALGFPPKNIIAMQGPFSKELN 186 (249)
T ss_pred EeC--------chhhHHHHhh-cccCCCEEEEEECCCccc-------------------cCCCChhhEEEEeCCCCHHHH
Confidence 332 2234555544 455666777777655531 445545566667777755667
Q ss_pred HHHHHhcCCeEEECccccccccCcccHHHHHHcCCcEEEcC
Q 015784 290 IGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGT 330 (400)
Q Consensus 290 i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~Gv~v~~gt 330 (400)
...+++.++.+.++-.|.-. ....-+....+.|+++.+-.
T Consensus 187 ~al~~~~~i~~lVtK~SG~~-g~~eKi~AA~~lgi~vivI~ 226 (249)
T PF02571_consen 187 RALFRQYGIDVLVTKESGGS-GFDEKIEAARELGIPVIVIK 226 (249)
T ss_pred HHHHHHcCCCEEEEcCCCch-hhHHHHHHHHHcCCeEEEEe
Confidence 88888899998888666433 22234666778898887653
No 185
>PRK12330 oxaloacetate decarboxylase; Provisional
Probab=40.04 E-value=3.7e+02 Score=26.27 Aligned_cols=102 Identities=14% Similarity=0.035 Sum_probs=57.0
Q ss_pred HHHHHHhcCcceeeccCcC----CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCC
Q 015784 130 CGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAAD 205 (400)
Q Consensus 130 ~~~~~l~~GvTt~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (400)
.++.+...|+..++.+... ......+..++.|.......++ ..++. .+ .+...++.+++...+.
T Consensus 102 fv~~a~~~Gidi~RIfd~lndv~nl~~ai~~vk~ag~~~~~~i~y-t~sp~--------~t---~e~~~~~a~~l~~~Ga 169 (499)
T PRK12330 102 FVEKSAENGMDVFRVFDALNDPRNLEHAMKAVKKVGKHAQGTICY-TVSPI--------HT---VEGFVEQAKRLLDMGA 169 (499)
T ss_pred HHHHHHHcCCCEEEEEecCChHHHHHHHHHHHHHhCCeEEEEEEE-ecCCC--------CC---HHHHHHHHHHHHHcCC
Confidence 4466888899998876432 2344567777777755322222 12211 12 2223333444433332
Q ss_pred CCeEEEeeccccccCCHHHHHHHHHHHHHc---CCeeeEecCCC
Q 015784 206 GRIRIWFGIRQIMNATDRLLLETRDMAREF---KTGIHMHVAEI 246 (400)
Q Consensus 206 ~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~---~~~v~~H~~~~ 246 (400)
..+ .-....-...|+...++++..++. ++++.+|+..+
T Consensus 170 d~I---~IkDtaGll~P~~~~~LV~~Lk~~~~~~ipI~~H~Hnt 210 (499)
T PRK12330 170 DSI---CIKDMAALLKPQPAYDIVKGIKEACGEDTRINLHCHST 210 (499)
T ss_pred CEE---EeCCCccCCCHHHHHHHHHHHHHhCCCCCeEEEEeCCC
Confidence 222 222334556788888888877665 68888888755
No 186
>PF10055 DUF2292: Uncharacterized small protein (DUF2292); InterPro: IPR018743 Members of this family of hypothetical bacterial proteins have no known function.
Probab=39.70 E-value=40 Score=19.53 Aligned_cols=15 Identities=13% Similarity=0.395 Sum_probs=12.6
Q ss_pred eEEEeCCEEEEecCC
Q 015784 42 GVFVVQDRIKAIGQS 56 (400)
Q Consensus 42 ~i~v~~g~I~~vg~~ 56 (400)
.|.|.||+|+.|-..
T Consensus 19 ~iiiqdG~vvQIe~~ 33 (38)
T PF10055_consen 19 TIIIQDGRVVQIEKT 33 (38)
T ss_pred EEEEECCEEEEEEhh
Confidence 588899999999754
No 187
>cd00947 TBP_aldolase_IIB Tagatose-1,6-bisphosphate (TBP) aldolase and related Type B Class II aldolases. TBP aldolase is a tetrameric class II aldolase that catalyzes the reversible condensation of dihydroxyacetone phosphate with glyceraldehyde 3-phsophate to produce tagatose 1,6-bisphosphate. There is an absolute requirement for a divalent metal ion, usually zinc, and in addition the enzymes are activated by monovalent cations such as Na+. The type A and type B Class II FBPA's differ in the presence and absence of distinct indels in the sequence that result in differing loop lengths in the structures.
Probab=38.97 E-value=1.5e+02 Score=26.18 Aligned_cols=18 Identities=11% Similarity=0.137 Sum_probs=10.7
Q ss_pred HHHHHcCCeeeEecCCCc
Q 015784 230 DMAREFKTGIHMHVAEIP 247 (400)
Q Consensus 230 ~~a~~~~~~v~~H~~~~~ 247 (400)
..|++..+||.+|.+...
T Consensus 63 ~~a~~~~VPV~lHLDH~~ 80 (276)
T cd00947 63 AAAERASVPVALHLDHGS 80 (276)
T ss_pred HHHHHCCCCEEEECCCCC
Confidence 445555666666665553
No 188
>TIGR01858 tag_bisphos_ald class II aldolase, tagatose bisphosphate family. This model describes tagatose-1,6-bisphosphate aldolases, and perhaps other closely related class II aldolases. This tetrameric, Zn2+-dependent enzyme is related to the class II fructose bisphosphate aldolase; fructose 1,6-bisphosphate and tagatose 1,6 bisphosphate differ only in chirality at C4.
Probab=38.00 E-value=1.8e+02 Score=25.93 Aligned_cols=18 Identities=6% Similarity=0.252 Sum_probs=9.8
Q ss_pred HHHHHcCCeeeEecCCCc
Q 015784 230 DMAREFKTGIHMHVAEIP 247 (400)
Q Consensus 230 ~~a~~~~~~v~~H~~~~~ 247 (400)
.+|++..+||.+|.+...
T Consensus 66 ~~a~~~~VPValHLDHg~ 83 (282)
T TIGR01858 66 AASTTYNMPLALHLDHHE 83 (282)
T ss_pred HHHHHCCCCEEEECCCCC
Confidence 345555666666655443
No 189
>PRK09195 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=37.87 E-value=1.6e+02 Score=26.24 Aligned_cols=18 Identities=11% Similarity=0.364 Sum_probs=10.5
Q ss_pred HHHHHcCCeeeEecCCCc
Q 015784 230 DMAREFKTGIHMHVAEIP 247 (400)
Q Consensus 230 ~~a~~~~~~v~~H~~~~~ 247 (400)
..|++..+||.+|.+...
T Consensus 68 ~~A~~~~VPV~lHLDHg~ 85 (284)
T PRK09195 68 AAAKQYHHPLALHLDHHE 85 (284)
T ss_pred HHHHHCCCCEEEECCCCC
Confidence 355566666666665444
No 190
>PRK08185 hypothetical protein; Provisional
Probab=37.65 E-value=1.7e+02 Score=26.04 Aligned_cols=20 Identities=15% Similarity=0.192 Sum_probs=10.6
Q ss_pred HHHHHHHcCCeeeEecCCCc
Q 015784 228 TRDMAREFKTGIHMHVAEIP 247 (400)
Q Consensus 228 ~~~~a~~~~~~v~~H~~~~~ 247 (400)
+...|++..+||.+|.+...
T Consensus 60 ~~~~a~~~~vPV~lHLDHg~ 79 (283)
T PRK08185 60 VRERAKRSPVPFVIHLDHGA 79 (283)
T ss_pred HHHHHHHCCCCEEEECCCCC
Confidence 33445555666666655443
No 191
>PF02811 PHP: PHP domain; InterPro: IPR004013 The PHP (Polymerase and Histidinol Phosphatase) domain is a putative phosphoesterase domain. This family is often associated with an N-terminal region IPR003141 from INTERPRO.; GO: 0003824 catalytic activity; PDB: 2WJE_A 3QY8_A 2WJD_A 2WJF_A 1PB0_B 1M68_A 1M65_A 3E38_B 2W9M_A 3E0F_A ....
Probab=37.22 E-value=1.1e+02 Score=24.21 Aligned_cols=39 Identities=10% Similarity=0.045 Sum_probs=27.6
Q ss_pred HHHHhcCcceeeccC---cCCHHHHHHHHHHcCCeEEEeccc
Q 015784 132 IELIHSGVTCFAEAG---GQHVSEMAKAVELLGLRACLVQST 170 (400)
Q Consensus 132 ~~~l~~GvTt~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~ 170 (400)
+.+.+.|++.+.-.. ........+.+...++..+.|..+
T Consensus 23 ~~A~~~Gl~~i~iTDH~~~~~~~~~~~~~~~~~i~vi~G~E~ 64 (175)
T PF02811_consen 23 EQAKEKGLDAIAITDHNNFAGYPDFYKEAKKKGIKVIPGVEI 64 (175)
T ss_dssp HHHHHTTESEEEEEEETTTTTHHHHHHHHHHTTSEEEEEEEE
T ss_pred HHHHHcCCCEEEEcCCcccccchHHHHHHHhcCCceEEeEee
Confidence 457888999888532 234556667777789998887765
No 192
>PRK05718 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=36.90 E-value=2.6e+02 Score=23.64 Aligned_cols=76 Identities=9% Similarity=0.007 Sum_probs=48.4
Q ss_pred ccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcC
Q 015784 218 MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAG 297 (400)
Q Consensus 218 ~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~ 297 (400)
...+.+....+.+.+.+.|+++.==...++...+ .++.+... . ++..+.-+.-++.++.+...+.|
T Consensus 22 r~~~~~~a~~i~~al~~~Gi~~iEitl~~~~~~~-----------~I~~l~~~-~--p~~~IGAGTVl~~~~a~~a~~aG 87 (212)
T PRK05718 22 VINKLEDAVPLAKALVAGGLPVLEVTLRTPAALE-----------AIRLIAKE-V--PEALIGAGTVLNPEQLAQAIEAG 87 (212)
T ss_pred EcCCHHHHHHHHHHHHHcCCCEEEEecCCccHHH-----------HHHHHHHH-C--CCCEEEEeeccCHHHHHHHHHcC
Confidence 3557778888888888888884222222222222 23333221 1 23555666667889999999999
Q ss_pred CeEEECcccc
Q 015784 298 VKVSHCPASA 307 (400)
Q Consensus 298 ~~~~~~p~~~ 307 (400)
..+.++|..+
T Consensus 88 A~FivsP~~~ 97 (212)
T PRK05718 88 AQFIVSPGLT 97 (212)
T ss_pred CCEEECCCCC
Confidence 9999999865
No 193
>PRK14041 oxaloacetate decarboxylase; Provisional
Probab=36.88 E-value=4e+02 Score=25.79 Aligned_cols=102 Identities=9% Similarity=-0.018 Sum_probs=54.9
Q ss_pred HHHHHhcCcceeeccCcCC----HHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCC
Q 015784 131 GIELIHSGVTCFAEAGGQH----VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADG 206 (400)
Q Consensus 131 ~~~~l~~GvTt~~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (400)
++.+++.|+..++.+...+ .....+.+++.|...... ..+..++ ..+ .+...+..++....+..
T Consensus 101 v~~A~~~Gvd~irif~~lnd~~n~~~~i~~ak~~G~~v~~~-i~~t~~p--------~~t---~e~~~~~a~~l~~~Gad 168 (467)
T PRK14041 101 VKKVAEYGLDIIRIFDALNDIRNLEKSIEVAKKHGAHVQGA-ISYTVSP--------VHT---LEYYLEFARELVDMGVD 168 (467)
T ss_pred HHHHHHCCcCEEEEEEeCCHHHHHHHHHHHHHHCCCEEEEE-EEeccCC--------CCC---HHHHHHHHHHHHHcCCC
Confidence 4567888999888764222 344567778888765422 2222221 112 22233333333333322
Q ss_pred CeEEEeeccccccCCHHHHHHHHHHHHH-cCCeeeEecCCCc
Q 015784 207 RIRIWFGIRQIMNATDRLLLETRDMARE-FKTGIHMHVAEIP 247 (400)
Q Consensus 207 ~~~~~~~~~~~~~~~~e~l~~~~~~a~~-~~~~v~~H~~~~~ 247 (400)
.+ .-....-...|+.+.++++..++ .++++.+|+.++.
T Consensus 169 ~I---~i~Dt~G~l~P~~v~~Lv~~lk~~~~vpI~~H~Hnt~ 207 (467)
T PRK14041 169 SI---CIKDMAGLLTPKRAYELVKALKKKFGVPVEVHSHCTT 207 (467)
T ss_pred EE---EECCccCCcCHHHHHHHHHHHHHhcCCceEEEecCCC
Confidence 22 22223345677778777776654 4788888887553
No 194
>COG2876 AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
Probab=36.46 E-value=1.8e+02 Score=25.42 Aligned_cols=89 Identities=10% Similarity=0.037 Sum_probs=58.7
Q ss_pred cccCCHHHHHHHHHHHHHcCCeeeEecCCCchhh-----hHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHH
Q 015784 217 IMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN-----QVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIG 291 (400)
Q Consensus 217 ~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~ 291 (400)
.-.+.++-+..+.+.++++|+++.+.+.+..... ..+.+.-.+++.-.+.|...|..+.+.++.-+...+-+++-
T Consensus 90 FQGlge~gL~~l~~a~~~~Gl~vvtEvm~~~~~e~~~~y~DilqvGARNMQNF~LLke~G~~~kPvLLKRg~~aTieEwL 169 (286)
T COG2876 90 FQGLGEEGLKLLKRAADETGLPVVTEVMDVRDVEAAAEYADILQVGARNMQNFALLKEVGRQNKPVLLKRGLSATIEEWL 169 (286)
T ss_pred ccccCHHHHHHHHHHHHHcCCeeEEEecCHHHHHHHHhhhhHHHhcccchhhhHHHHHhcccCCCeEEecCccccHHHHH
Confidence 3455667788888888889999888876544321 12233344455566788999999988888888887776654
Q ss_pred HHHh----c-CCeEEECcc
Q 015784 292 LLSR----A-GVKVSHCPA 305 (400)
Q Consensus 292 ~~~~----~-~~~~~~~p~ 305 (400)
..++ . +-.++.|-.
T Consensus 170 ~AAEYI~s~GN~~vILCER 188 (286)
T COG2876 170 NAAEYILSHGNGNVILCER 188 (286)
T ss_pred HHHHHHHhCCCCcEEEEec
Confidence 4433 3 344676644
No 195
>TIGR03849 arch_ComA phosphosulfolactate synthase. This model finds the ComA (Coenzyme M biosynthesis A) protein, phosphosulfolactate synthase, in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulfopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea, as for expoxide metabolism in Xanthobacter autotrophicus Py2, but candidate phosphosulfolactate synthases from that and other species occur fall below the cutoff and outside the scope of this model. This model deliberately is narrower in scope than pfam02679.
Probab=34.89 E-value=2.4e+02 Score=24.31 Aligned_cols=98 Identities=11% Similarity=0.006 Sum_probs=65.0
Q ss_pred HHHHHhcCcceeeccCcCCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEE
Q 015784 131 GIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRI 210 (400)
Q Consensus 131 ~~~~l~~GvTt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (400)
.-+.++-|..|..-+....+....+.+++.++....+...+... ..-....+.++..+..+-..+.+
T Consensus 24 yID~lKfg~Gt~~l~~~~~l~eki~la~~~~V~v~~GGtl~E~~-------------~~q~~~~~Yl~~~k~lGf~~IEi 90 (237)
T TIGR03849 24 YITFVKFGWGTSALIDRDIVKEKIEMYKDYGIKVYPGGTLFEIA-------------HSKGKFDEYLNECDELGFEAVEI 90 (237)
T ss_pred heeeEEecCceEeeccHHHHHHHHHHHHHcCCeEeCCccHHHHH-------------HHhhhHHHHHHHHHHcCCCEEEE
Confidence 34567777777777765668888899999999887653333211 00123445555666664444433
Q ss_pred EeeccccccCCHHHHHHHHHHHHHcCCeeeEecC
Q 015784 211 WFGIRQIMNATDRLLLETRDMAREFKTGIHMHVA 244 (400)
Q Consensus 211 ~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~ 244 (400)
..+...++.+....+++.+++.|+.+..-+.
T Consensus 91 ---S~G~~~i~~~~~~rlI~~~~~~g~~v~~EvG 121 (237)
T TIGR03849 91 ---SDGSMEISLEERCNLIERAKDNGFMVLSEVG 121 (237)
T ss_pred ---cCCccCCCHHHHHHHHHHHHhCCCeEecccc
Confidence 2345677888999999999999999877664
No 196
>PRK12581 oxaloacetate decarboxylase; Provisional
Probab=34.55 E-value=4.3e+02 Score=25.53 Aligned_cols=102 Identities=12% Similarity=0.003 Sum_probs=57.3
Q ss_pred HHHHHhcCcceeeccCcC----CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCC
Q 015784 131 GIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADG 206 (400)
Q Consensus 131 ~~~~l~~GvTt~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (400)
++.+...|+..++.+... ......+.+++.|.......++.. ++ ...++-..+..+.....+..
T Consensus 111 v~~a~~~Gidi~Rifd~lnd~~n~~~ai~~ak~~G~~~~~~i~yt~-sp-----------~~t~~y~~~~a~~l~~~Gad 178 (468)
T PRK12581 111 ISLSAQNGIDVFRIFDALNDPRNIQQALRAVKKTGKEAQLCIAYTT-SP-----------VHTLNYYLSLVKELVEMGAD 178 (468)
T ss_pred HHHHHHCCCCEEEEcccCCCHHHHHHHHHHHHHcCCEEEEEEEEEe-CC-----------cCcHHHHHHHHHHHHHcCCC
Confidence 466889999999976522 244557888888887543322222 21 11122233333333333322
Q ss_pred CeEEEeeccccccCCHHHHHHHHHHHHH-cCCeeeEecCCCc
Q 015784 207 RIRIWFGIRQIMNATDRLLLETRDMARE-FKTGIHMHVAEIP 247 (400)
Q Consensus 207 ~~~~~~~~~~~~~~~~e~l~~~~~~a~~-~~~~v~~H~~~~~ 247 (400)
.+ .-....-...|+.+.++++..++ .++++.+|+..+.
T Consensus 179 ~I---~IkDtaG~l~P~~v~~Lv~alk~~~~~pi~~H~Hnt~ 217 (468)
T PRK12581 179 SI---CIKDMAGILTPKAAKELVSGIKAMTNLPLIVHTHATS 217 (468)
T ss_pred EE---EECCCCCCcCHHHHHHHHHHHHhccCCeEEEEeCCCC
Confidence 22 22233445677788888777665 3688888887553
No 197
>PF11068 YlqD: YlqD protein; InterPro: IPR021297 This bacterial family of proteins has no known function. ; PDB: 4DCI_C.
Probab=34.54 E-value=42 Score=25.81 Aligned_cols=14 Identities=14% Similarity=0.238 Sum_probs=12.6
Q ss_pred ceeEEEeCCEEEEe
Q 015784 40 NGGVFVVQDRIKAI 53 (400)
Q Consensus 40 ~~~i~v~~g~I~~v 53 (400)
+..|+|+||+|++|
T Consensus 117 ~~EIvvkDG~V~eI 130 (131)
T PF11068_consen 117 GVEIVVKDGKVIEI 130 (131)
T ss_dssp TEEEEEETTEEEEE
T ss_pred CcEEEEECCEEEEe
Confidence 57899999999987
No 198
>PRK12738 kbaY tagatose-bisphosphate aldolase; Reviewed
Probab=34.42 E-value=2.1e+02 Score=25.49 Aligned_cols=18 Identities=6% Similarity=0.261 Sum_probs=10.5
Q ss_pred HHHHHcCCeeeEecCCCc
Q 015784 230 DMAREFKTGIHMHVAEIP 247 (400)
Q Consensus 230 ~~a~~~~~~v~~H~~~~~ 247 (400)
.+|++.++||.+|.+...
T Consensus 68 ~~a~~~~VPValHLDHg~ 85 (286)
T PRK12738 68 AYSTTYNMPLALHLDHHE 85 (286)
T ss_pred HHHHHCCCCEEEECCCCC
Confidence 445556666666665544
No 199
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=33.75 E-value=3.3e+02 Score=25.13 Aligned_cols=21 Identities=19% Similarity=0.143 Sum_probs=14.2
Q ss_pred cCCHHHHHHHHHHHHHcCCee
Q 015784 219 NATDRLLLETRDMAREFKTGI 239 (400)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~v 239 (400)
+.+.+.+++.+++|+++|.++
T Consensus 45 nfs~~~l~e~i~~ah~~gkk~ 65 (347)
T COG0826 45 NFSVEDLAEAVELAHSAGKKV 65 (347)
T ss_pred cCCHHHHHHHHHHHHHcCCeE
Confidence 456666777777777777754
No 200
>COG2131 ComEB Deoxycytidylate deaminase [Nucleotide transport and metabolism]
Probab=33.21 E-value=1.3e+02 Score=24.16 Aligned_cols=20 Identities=35% Similarity=0.466 Sum_probs=17.0
Q ss_pred eceeEEEeCCEEEEecCChh
Q 015784 39 RNGGVFVVQDRIKAIGQSAD 58 (400)
Q Consensus 39 ~~~~i~v~~g~I~~vg~~~~ 58 (400)
.-|+++|+|++|+++|-+..
T Consensus 29 ~VGAvIvkd~rIiatGYNG~ 48 (164)
T COG2131 29 QVGAVIVKDGRIIATGYNGA 48 (164)
T ss_pred ceeEEEEeCCeEEEeecCCC
Confidence 55799999999999997654
No 201
>PRK09140 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed
Probab=32.92 E-value=3e+02 Score=23.13 Aligned_cols=76 Identities=16% Similarity=0.068 Sum_probs=46.7
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCC
Q 015784 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGV 298 (400)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~ 298 (400)
..+.+...++++.+.+.|+++.=-...+....+ .++.+... ...+..+.-+..++.++++...+.|.
T Consensus 18 ~~~~~~~~~~~~a~~~gGi~~iEvt~~~~~~~~-----------~i~~l~~~--~~~~~~iGaGTV~~~~~~~~a~~aGA 84 (206)
T PRK09140 18 GITPDEALAHVGALIEAGFRAIEIPLNSPDPFD-----------SIAALVKA--LGDRALIGAGTVLSPEQVDRLADAGG 84 (206)
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEeCCCccHHH-----------HHHHHHHH--cCCCcEEeEEecCCHHHHHHHHHcCC
Confidence 447778888888888888884322222332222 12111111 11134556666778888999999999
Q ss_pred eEEECcccc
Q 015784 299 KVSHCPASA 307 (400)
Q Consensus 299 ~~~~~p~~~ 307 (400)
...+.|..+
T Consensus 85 ~fivsp~~~ 93 (206)
T PRK09140 85 RLIVTPNTD 93 (206)
T ss_pred CEEECCCCC
Confidence 988888765
No 202
>TIGR00167 cbbA ketose-bisphosphate aldolases. fructose-bisphosphate and tagatose-bisphosphate aldolase.
Probab=32.85 E-value=2.3e+02 Score=25.28 Aligned_cols=11 Identities=9% Similarity=0.178 Sum_probs=5.4
Q ss_pred CCeeeEecCCC
Q 015784 236 KTGIHMHVAEI 246 (400)
Q Consensus 236 ~~~v~~H~~~~ 246 (400)
.+||.+|.+..
T Consensus 77 ~VPV~lHLDHg 87 (288)
T TIGR00167 77 GVPVALHLDHG 87 (288)
T ss_pred CCcEEEECCCC
Confidence 44555555443
No 203
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=32.77 E-value=2.4e+02 Score=22.09 Aligned_cols=44 Identities=16% Similarity=0.132 Sum_probs=30.5
Q ss_pred hHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccc
Q 015784 263 TVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAM 308 (400)
Q Consensus 263 ~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~ 308 (400)
.++.+.+.|.-. ..+.-+..+.+++++.++++|+.-++.|.++.
T Consensus 83 lve~lre~G~~~--i~v~~GGvip~~d~~~l~~~G~~~if~pgt~~ 126 (143)
T COG2185 83 LVEALREAGVED--ILVVVGGVIPPGDYQELKEMGVDRIFGPGTPI 126 (143)
T ss_pred HHHHHHHhCCcc--eEEeecCccCchhHHHHHHhCcceeeCCCCCH
Confidence 445666665532 22245555678889999999999999987764
No 204
>TIGR01108 oadA oxaloacetate decarboxylase alpha subunit. This model describes the bacterial oxaloacetate decarboxylase alpha subunit and its equivalents in archaea. The oxaloacetate decarboxylase Na+ pump is the paradigm of the family of Na+ transport decarboxylases that present in bacteria and archaea. It a multi subunit enzyme consisting of a peripheral alpha-subunit and integral membrane subunits beta and gamma. The energy released by the decarboxylation reaction of oxaloacetate is coupled to Na+ ion pumping across the membrane.
Probab=32.65 E-value=5.2e+02 Score=25.87 Aligned_cols=102 Identities=14% Similarity=0.077 Sum_probs=55.5
Q ss_pred HHHHHHhcCcceeeccCc----CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCC
Q 015784 130 CGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAAD 205 (400)
Q Consensus 130 ~~~~~l~~GvTt~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (400)
.++.++..|+..++.+.. .......+.+++.|.......++ ..++. .+ .+...+..+++...+.
T Consensus 96 ~v~~a~~~Gvd~irif~~lnd~~n~~~~i~~ak~~G~~v~~~i~~-t~~p~--------~~---~~~~~~~~~~~~~~Ga 163 (582)
T TIGR01108 96 FVKKAVENGMDVFRIFDALNDPRNLQAAIQAAKKHGAHAQGTISY-TTSPV--------HT---LETYLDLAEELLEMGV 163 (582)
T ss_pred HHHHHHHCCCCEEEEEEecCcHHHHHHHHHHHHHcCCEEEEEEEe-ccCCC--------CC---HHHHHHHHHHHHHcCC
Confidence 346688889998886532 12444567788888765443222 11211 11 2223333334333332
Q ss_pred CCeEEEeeccccccCCHHHHHHHHHHHHH-cCCeeeEecCCC
Q 015784 206 GRIRIWFGIRQIMNATDRLLLETRDMARE-FKTGIHMHVAEI 246 (400)
Q Consensus 206 ~~~~~~~~~~~~~~~~~e~l~~~~~~a~~-~~~~v~~H~~~~ 246 (400)
..+ .-....-...|+.+.++++..++ .++++.+|+.++
T Consensus 164 d~I---~i~Dt~G~~~P~~v~~lv~~lk~~~~~pi~~H~Hnt 202 (582)
T TIGR01108 164 DSI---CIKDMAGILTPKAAYELVSALKKRFGLPVHLHSHAT 202 (582)
T ss_pred CEE---EECCCCCCcCHHHHHHHHHHHHHhCCCceEEEecCC
Confidence 222 22223345677788888777654 478888888754
No 205
>PF07287 DUF1446: Protein of unknown function (DUF1446); InterPro: IPR010839 This family consists of several bacterial and plant proteins of around 400 residues in length. The function of this family is unknown.
Probab=31.68 E-value=4.3e+02 Score=24.57 Aligned_cols=23 Identities=39% Similarity=0.492 Sum_probs=17.5
Q ss_pred cCcccHHHHHHcCCcEEEc---CCCC
Q 015784 311 LGFAPIKEMLHADICVSLG---TDGA 333 (400)
Q Consensus 311 ~~~~~~~~~~~~Gv~v~~g---tD~~ 333 (400)
.|..|+.+.+++|..|.|+ +|..
T Consensus 148 lGa~pI~~AL~~GADIVI~GR~~D~A 173 (362)
T PF07287_consen 148 LGAEPIVEALEAGADIVITGRVADPA 173 (362)
T ss_pred cChHHHHHHHHcCCCEEEeCcccchH
Confidence 5677999999999877775 5643
No 206
>PRK12857 fructose-1,6-bisphosphate aldolase; Reviewed
Probab=31.50 E-value=2.2e+02 Score=25.37 Aligned_cols=20 Identities=15% Similarity=0.215 Sum_probs=11.7
Q ss_pred HHHHHHHcCCeeeEecCCCc
Q 015784 228 TRDMAREFKTGIHMHVAEIP 247 (400)
Q Consensus 228 ~~~~a~~~~~~v~~H~~~~~ 247 (400)
+...|++..+||.+|.+...
T Consensus 66 ~~~~A~~~~VPValHLDH~~ 85 (284)
T PRK12857 66 VRTAAEKASVPVALHLDHGT 85 (284)
T ss_pred HHHHHHHCCCCEEEECCCCC
Confidence 33455666666666665554
No 207
>COG0134 TrpC Indole-3-glycerol phosphate synthase [Amino acid transport and metabolism]
Probab=31.10 E-value=2.6e+02 Score=24.42 Aligned_cols=30 Identities=23% Similarity=0.173 Sum_probs=24.4
Q ss_pred ccCCHHHHHHHHHHHHHcCCeeeEecCCCc
Q 015784 218 MNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (400)
Q Consensus 218 ~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~ 247 (400)
..++++.++++.+.|+++|+.+.+.+.+..
T Consensus 138 ~~L~~~~l~el~~~A~~LGm~~LVEVh~~e 167 (254)
T COG0134 138 AALDDEQLEELVDRAHELGMEVLVEVHNEE 167 (254)
T ss_pred HhcCHHHHHHHHHHHHHcCCeeEEEECCHH
Confidence 356788899999999999999888775433
No 208
>PRK12737 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=30.96 E-value=2.3e+02 Score=25.24 Aligned_cols=19 Identities=16% Similarity=0.331 Sum_probs=10.9
Q ss_pred HHHHHHcCCeeeEecCCCc
Q 015784 229 RDMAREFKTGIHMHVAEIP 247 (400)
Q Consensus 229 ~~~a~~~~~~v~~H~~~~~ 247 (400)
...|++..+||.+|.+...
T Consensus 67 ~~~a~~~~VPValHLDH~~ 85 (284)
T PRK12737 67 EVAARKYNIPLALHLDHHE 85 (284)
T ss_pred HHHHHHCCCCEEEECCCCC
Confidence 3455566666666665444
No 209
>PRK05588 histidinol-phosphatase; Provisional
Probab=30.24 E-value=1.1e+02 Score=26.65 Aligned_cols=46 Identities=11% Similarity=0.024 Sum_probs=29.8
Q ss_pred hHHHHHHhcCCeEEECccccccccCc----ccHHHHHHcCCc-EEEcCCCC
Q 015784 288 TEIGLLSRAGVKVSHCPASAMRMLGF----APIKEMLHADIC-VSLGTDGA 333 (400)
Q Consensus 288 ~~i~~~~~~~~~~~~~p~~~~~~~~~----~~~~~~~~~Gv~-v~~gtD~~ 333 (400)
+.++.++++|+.+.+.-.+-.+.... .+++++.+.|++ +++|||.-
T Consensus 170 ~il~~~~~~g~~lEINt~~l~~~~~~~~~~~~l~~~~~~g~~~i~lgSDAH 220 (255)
T PRK05588 170 EILKVLIEKEKVLEINTRRLDDKRSVENLVKIYKRFYELGGKYITLGSDAH 220 (255)
T ss_pred HHHHHHHHcCCEEEEECcccCCCCCCCCHHHHHHHHHHcCCcEEEEECCCC
Confidence 34577888898877653221111112 247788899988 79999964
No 210
>PRK09856 fructoselysine 3-epimerase; Provisional
Probab=30.08 E-value=3.7e+02 Score=23.40 Aligned_cols=114 Identities=9% Similarity=-0.008 Sum_probs=56.6
Q ss_pred HHHHHHhcCcceeeccCc-----------CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccc-cCCchHHHHHHHHHH
Q 015784 130 CGIELIHSGVTCFAEAGG-----------QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWA-VRTTDDCIQSQKELY 197 (400)
Q Consensus 130 ~~~~~l~~GvTt~~~~~~-----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 197 (400)
.++.+.+.|++.+--... ...+.+.+..++.|+......... .+..++.... .......++...+.+
T Consensus 18 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~~~~~gl~v~s~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~i 96 (275)
T PRK09856 18 AFRDASELGYDGIEIWGGRPHAFAPDLKAGGIKQIKALAQTYQMPIIGYTPET-NGYPYNMMLGDEHMRRESLDMIKLAM 96 (275)
T ss_pred HHHHHHHcCCCEEEEccCCccccccccCchHHHHHHHHHHHcCCeEEEecCcc-cCcCccccCCCHHHHHHHHHHHHHHH
Confidence 335577789998875321 124556677888898763321111 0100010000 001122333444444
Q ss_pred HHhccCCCCCeEEEeeccccc-------cCCHHHHHHHHHHHHHcCCeeeEecC
Q 015784 198 AKHHHAADGRIRIWFGIRQIM-------NATDRLLLETRDMAREFKTGIHMHVA 244 (400)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~-------~~~~e~l~~~~~~a~~~~~~v~~H~~ 244 (400)
+.....+...+.+..+..... ....+.++++.++|+++|+.+.+|..
T Consensus 97 ~~a~~lGa~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~iE~~ 150 (275)
T PRK09856 97 DMAKEMNAGYTLISAAHAGYLTPPNVIWGRLAENLSELCEYAENIGMDLILEPL 150 (275)
T ss_pred HHHHHhCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEecC
Confidence 544555444443322211111 11123588899999999999998864
No 211
>PRK12457 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=28.68 E-value=4.2e+02 Score=23.51 Aligned_cols=115 Identities=14% Similarity=0.153 Sum_probs=69.3
Q ss_pred cCC-HHHHHHHHHHHHHcCCeeeEecCCCchhhh--HHhhhcCC---CCChHHHHhHhCCCCCCeeeEEecCCChhHHHH
Q 015784 219 NAT-DRLLLETRDMAREFKTGIHMHVAEIPYENQ--VVMDTRKV---DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGL 292 (400)
Q Consensus 219 ~~~-~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~--~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~ 292 (400)
... ++-|+-+.+..++.|+++...+.+...... ...+.... ...-.++|...+..+.+..+-.+.+++++++..
T Consensus 69 G~G~eeGL~iL~~vk~~~GlpvvTeV~~~~~~~~~ae~vDilQIgAr~~rntdLL~a~~~t~kpV~lKrGqf~s~~e~~~ 148 (281)
T PRK12457 69 GVGLDEGLRIFEEVKARFGVPVITDVHEVEQAAPVAEVADVLQVPAFLARQTDLVVAIAKTGKPVNIKKPQFMSPTQMKH 148 (281)
T ss_pred CCCHHHHHHHHHHHHHHHCCceEEEeCCHHHHHHHhhhCeEEeeCchhhchHHHHHHHhccCCeEEecCCCcCCHHHHHH
Confidence 344 456777777788889998888776544221 11122222 223457778888777778888888888887644
Q ss_pred HHh----c-CCeEEECccccc----cc-cCcccHHHHHHc--CCcEEEcCCCC
Q 015784 293 LSR----A-GVKVSHCPASAM----RM-LGFAPIKEMLHA--DICVSLGTDGA 333 (400)
Q Consensus 293 ~~~----~-~~~~~~~p~~~~----~~-~~~~~~~~~~~~--Gv~v~~gtD~~ 333 (400)
.++ . +-.++.|-.... ++ .....+..|.+. +.+|.+---|.
T Consensus 149 aae~i~~~Gn~~vilcERG~~fgy~~~~~D~~~ip~mk~~~t~lPVi~DpSHs 201 (281)
T PRK12457 149 VVSKCREAGNDRVILCERGSSFGYDNLVVDMLGFRQMKRTTGDLPVIFDVTHS 201 (281)
T ss_pred HHHHHHHcCCCeEEEEeCCCCCCCCCcccchHHHHHHHhhCCCCCEEEeCCcc
Confidence 433 3 344666655322 11 233455667775 89998865553
No 212
>TIGR01235 pyruv_carbox pyruvate carboxylase. This enzyme plays a role in gluconeogensis but not glycolysis.
Probab=28.46 E-value=8.3e+02 Score=26.93 Aligned_cols=109 Identities=12% Similarity=-0.061 Sum_probs=58.3
Q ss_pred HHHHHHhcCcceeeccCcC----CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCC
Q 015784 130 CGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAAD 205 (400)
Q Consensus 130 ~~~~~l~~GvTt~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (400)
.++.+.+.|+..++.+..- ++....+.+++.|.......++. .. ..++ . .+...++...++.+.+...+.
T Consensus 630 f~~~~~~~GidifrifD~lN~~~n~~~~~~~~~~~g~~~~~~i~yt-~~-~~d~-~---~~~~~l~y~~~~ak~l~~~Ga 703 (1143)
T TIGR01235 630 FVKQAAQGGIDIFRVFDSLNWVENMRVGMDAVAEAGKVVEAAICYT-GD-ILDP-A---RPKYDLKYYTNLAVELEKAGA 703 (1143)
T ss_pred HHHHHHHcCCCEEEECccCcCHHHHHHHHHHHHHcCCEEEEEEEEe-cc-CCCc-C---CCCCCHHHHHHHHHHHHHcCC
Confidence 4567889999999987532 24455778888887553333222 10 0011 1 111122223333444433332
Q ss_pred CCeEEEeeccccccCCHHHHHHHHHHHHH-cCCeeeEecCCCc
Q 015784 206 GRIRIWFGIRQIMNATDRLLLETRDMARE-FKTGIHMHVAEIP 247 (400)
Q Consensus 206 ~~~~~~~~~~~~~~~~~e~l~~~~~~a~~-~~~~v~~H~~~~~ 247 (400)
..+ .-....-...|..+.++++..++ .++++++|+.++.
T Consensus 704 d~I---~ikDt~Gll~P~~~~~Lv~~lk~~~~~pi~~H~Hdt~ 743 (1143)
T TIGR01235 704 HIL---GIKDMAGLLKPAAAKLLIKALREKTDLPIHFHTHDTS 743 (1143)
T ss_pred CEE---EECCCcCCcCHHHHHHHHHHHHHhcCCeEEEEECCCC
Confidence 222 22223345667777777766554 4899999987653
No 213
>PRK05835 fructose-bisphosphate aldolase; Provisional
Probab=28.35 E-value=3.3e+02 Score=24.58 Aligned_cols=10 Identities=10% Similarity=0.212 Sum_probs=5.2
Q ss_pred CeeeEecCCC
Q 015784 237 TGIHMHVAEI 246 (400)
Q Consensus 237 ~~v~~H~~~~ 246 (400)
+||.+|.+..
T Consensus 75 VPValHLDHg 84 (307)
T PRK05835 75 IPVALHLDHG 84 (307)
T ss_pred CeEEEECCCC
Confidence 5555555443
No 214
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=27.95 E-value=2.9e+02 Score=25.28 Aligned_cols=98 Identities=12% Similarity=0.105 Sum_probs=57.0
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEE-ecCCChhHHHHHHhcC
Q 015784 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAH-TVWVNHTEIGLLSRAG 297 (400)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h-~~~~~~~~i~~~~~~~ 297 (400)
.++.+.+.++.+.|++.|+.+..-..+.. .++.+..+++. .+-.. +.......++.+++.|
T Consensus 72 ~l~~e~~~~L~~~~~~~Gi~~~stpfd~~---------------svd~l~~~~v~---~~KIaS~~~~n~pLL~~~A~~g 133 (329)
T TIGR03569 72 ELSEEDHRELKEYCESKGIEFLSTPFDLE---------------SADFLEDLGVP---RFKIPSGEITNAPLLKKIARFG 133 (329)
T ss_pred CCCHHHHHHHHHHHHHhCCcEEEEeCCHH---------------HHHHHHhcCCC---EEEECcccccCHHHHHHHHhcC
Confidence 45788899999999999999988876544 44555554432 21112 2222466788888888
Q ss_pred CeEEECccccccccCc-ccHHHHHHcCCc---EEE---cCCCCCC
Q 015784 298 VKVSHCPASAMRMLGF-APIKEMLHADIC---VSL---GTDGAPS 335 (400)
Q Consensus 298 ~~~~~~p~~~~~~~~~-~~~~~~~~~Gv~---v~~---gtD~~~~ 335 (400)
..+++.--.. .+..+ ..+..+.+.|.. +++ .|.+|..
T Consensus 134 kPvilStGma-tl~Ei~~Av~~i~~~G~~~~~i~llhC~s~YP~~ 177 (329)
T TIGR03569 134 KPVILSTGMA-TLEEIEAAVGVLRDAGTPDSNITLLHCTTEYPAP 177 (329)
T ss_pred CcEEEECCCC-CHHHHHHHHHHHHHcCCCcCcEEEEEECCCCCCC
Confidence 8765532211 11112 234555566753 443 4445544
No 215
>PRK13802 bifunctional indole-3-glycerol phosphate synthase/tryptophan synthase subunit beta; Provisional
Probab=27.52 E-value=3.2e+02 Score=27.99 Aligned_cols=114 Identities=11% Similarity=0.076 Sum_probs=63.5
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhh----hcCCCC--------ChHHHHhHhCCCCC-CeeeEEecCC
Q 015784 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD----TRKVDH--------GTVTFLDKIEFLQN-NLLSAHTVWV 285 (400)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~----~~~~~~--------~~~~~l~~~~~~~~-~~~~~h~~~~ 285 (400)
.++++.+.++.+.|++.|+.+.+.+.+..+ .+...+ ..+.+- ..-....-...+.. ..++.-...-
T Consensus 143 ~L~~~~l~~l~~~a~~lGme~LvEvh~~~e-l~~a~~~ga~iiGINnRdL~tf~vd~~~t~~L~~~ip~~~~~VsESGI~ 221 (695)
T PRK13802 143 ALDDAQLKHLLDLAHELGMTVLVETHTREE-IERAIAAGAKVIGINARNLKDLKVDVNKYNELAADLPDDVIKVAESGVF 221 (695)
T ss_pred hcCHHHHHHHHHHHHHcCCeEEEEeCCHHH-HHHHHhCCCCEEEEeCCCCccceeCHHHHHHHHhhCCCCcEEEEcCCCC
Confidence 456789999999999999998877754333 332221 111100 01111111111112 2333333333
Q ss_pred ChhHHHHHHhcCCeEEECccccccccCc-ccHHHHHHcCCcEEEcCCCC
Q 015784 286 NHTEIGLLSRAGVKVSHCPASAMRMLGF-APIKEMLHADICVSLGTDGA 333 (400)
Q Consensus 286 ~~~~i~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~Gv~v~~gtD~~ 333 (400)
++++++++++.|+..+..-.+-|+..+. ..++++...+-.+-.+-|-+
T Consensus 222 ~~~d~~~l~~~G~davLIGeslm~~~dp~~~~~~l~~~~~~~~~~~~~~ 270 (695)
T PRK13802 222 GAVEVEDYARAGADAVLVGEGVATADDHELAVERLVKAGARVKASETTP 270 (695)
T ss_pred CHHHHHHHHHCCCCEEEECHHhhCCCCHHHHHHHHHhccccccccCCCC
Confidence 7899999999998876654554544222 34677777776666555443
No 216
>PRK07329 hypothetical protein; Provisional
Probab=27.51 E-value=95 Score=26.90 Aligned_cols=45 Identities=11% Similarity=-0.056 Sum_probs=28.9
Q ss_pred HHHHHHhcCCeEEECcccccc-ccC---cccHHHHHHcCCc-EEEcCCCC
Q 015784 289 EIGLLSRAGVKVSHCPASAMR-MLG---FAPIKEMLHADIC-VSLGTDGA 333 (400)
Q Consensus 289 ~i~~~~~~~~~~~~~p~~~~~-~~~---~~~~~~~~~~Gv~-v~~gtD~~ 333 (400)
.++.++++|+.+.+.-.+-.+ ... ..+++.+.+.|++ +.+|||.-
T Consensus 170 i~~~~~~~~~~lEiNt~~~~~~~~~~~~~~~l~~~~~~g~~~i~~gSDAH 219 (246)
T PRK07329 170 IFAKMIDNDLAFELNTKSMYLYGNEGLYRYAIELYKQLGGKLFSIGSDAH 219 (246)
T ss_pred HHHHHHHcCCeEEEECcccccCCCCcchHHHHHHHHHcCCeEEEecCCCC
Confidence 357778888887765332211 111 2246778899975 89999965
No 217
>PRK09248 putative hydrolase; Validated
Probab=27.19 E-value=4.1e+02 Score=22.88 Aligned_cols=47 Identities=19% Similarity=0.063 Sum_probs=29.2
Q ss_pred hHHHHHHhcCCeEEECccccc--cccC----cccHHHHHHcCCcEEEcCCCCC
Q 015784 288 TEIGLLSRAGVKVSHCPASAM--RMLG----FAPIKEMLHADICVSLGTDGAP 334 (400)
Q Consensus 288 ~~i~~~~~~~~~~~~~p~~~~--~~~~----~~~~~~~~~~Gv~v~~gtD~~~ 334 (400)
+.++.++++|+.+.+.-.+.. +... ...++.+.+.|+++++|||.-.
T Consensus 144 ~~~~~~~~~g~~lEvN~~~l~~~~~g~~~~~~~~~~~~~~~g~~~~~gSDAH~ 196 (246)
T PRK09248 144 AVVKAAKEHNVALEINNSSFGHSRKGSEDNCRAIAALCKKAGVWVALGSDAHI 196 (246)
T ss_pred HHHHHHHHhCCEEEEECCCCccCCCCCcChHHHHHHHHHHcCCeEEEeCCCCC
Confidence 446778888887665422221 1111 1234667788999999999653
No 218
>PRK08610 fructose-bisphosphate aldolase; Reviewed
Probab=27.13 E-value=4.6e+02 Score=23.44 Aligned_cols=40 Identities=18% Similarity=0.098 Sum_probs=23.3
Q ss_pred HHHHHhcCcceeec-cCcCCH-------HHHHHHHHHcCCeEEEeccc
Q 015784 131 GIELIHSGVTCFAE-AGGQHV-------SEMAKAVELLGLRACLVQST 170 (400)
Q Consensus 131 ~~~~l~~GvTt~~~-~~~~~~-------~~~~~~~~~~g~~~~~~~~~ 170 (400)
+..++..|+|++.- .+.... ....+.+...|+..-...+.
T Consensus 93 i~~ai~~GftSVM~DgS~l~~eeNi~~T~~vve~Ah~~gv~VEaElG~ 140 (286)
T PRK08610 93 CKEAIDAGFTSVMIDASHSPFEENVATTKKVVEYAHEKGVSVEAELGT 140 (286)
T ss_pred HHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEec
Confidence 35688889999883 432222 23456677777655443333
No 219
>TIGR00167 cbbA ketose-bisphosphate aldolases. fructose-bisphosphate and tagatose-bisphosphate aldolase.
Probab=26.94 E-value=4.6e+02 Score=23.43 Aligned_cols=37 Identities=5% Similarity=0.135 Sum_probs=21.9
Q ss_pred HHHHHhcCcceeec-cCcCCH-------HHHHHHHHHcCCeEEEe
Q 015784 131 GIELIHSGVTCFAE-AGGQHV-------SEMAKAVELLGLRACLV 167 (400)
Q Consensus 131 ~~~~l~~GvTt~~~-~~~~~~-------~~~~~~~~~~g~~~~~~ 167 (400)
+.+++..|+|++.- .+.... ....+.+...|+..-..
T Consensus 93 i~~ai~~GftSVMiDgS~lp~eeNi~~T~~vv~~Ah~~gv~VEaE 137 (288)
T TIGR00167 93 CAQAVKAGFSSVMIDGSHEPFEENIELTKKVVERAHKMGVSVEAE 137 (288)
T ss_pred HHHHHHcCCCEEEecCCCCCHHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 46678889999883 432222 23456666667655433
No 220
>PRK12331 oxaloacetate decarboxylase; Provisional
Probab=26.78 E-value=5.8e+02 Score=24.55 Aligned_cols=103 Identities=14% Similarity=0.038 Sum_probs=56.4
Q ss_pred HHHHHHhcCcceeeccCc----CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCC
Q 015784 130 CGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAAD 205 (400)
Q Consensus 130 ~~~~~l~~GvTt~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (400)
.++.+++.|+..+..+.. .......+.+++.|.......++.. ++. ...+. ..+..++....+.
T Consensus 101 ~v~~A~~~Gvd~irif~~lnd~~n~~~~v~~ak~~G~~v~~~i~~t~-~p~--------~~~~~---~~~~a~~l~~~Ga 168 (448)
T PRK12331 101 FVQKSVENGIDIIRIFDALNDVRNLETAVKATKKAGGHAQVAISYTT-SPV--------HTIDY---FVKLAKEMQEMGA 168 (448)
T ss_pred HHHHHHHCCCCEEEEEEecCcHHHHHHHHHHHHHcCCeEEEEEEeec-CCC--------CCHHH---HHHHHHHHHHcCC
Confidence 346678889998887532 2244567788888876533322221 111 12222 2333333333332
Q ss_pred CCeEEEeeccccccCCHHHHHHHHHHHHH-cCCeeeEecCCCc
Q 015784 206 GRIRIWFGIRQIMNATDRLLLETRDMARE-FKTGIHMHVAEIP 247 (400)
Q Consensus 206 ~~~~~~~~~~~~~~~~~e~l~~~~~~a~~-~~~~v~~H~~~~~ 247 (400)
..+ .-....-...|+.+.++++..++ .++++.+|+.++.
T Consensus 169 d~I---~i~Dt~G~l~P~~v~~lv~alk~~~~~pi~~H~Hnt~ 208 (448)
T PRK12331 169 DSI---CIKDMAGILTPYVAYELVKRIKEAVTVPLEVHTHATS 208 (448)
T ss_pred CEE---EEcCCCCCCCHHHHHHHHHHHHHhcCCeEEEEecCCC
Confidence 222 22233445677788888877654 4788888887654
No 221
>PRK08123 histidinol-phosphatase; Reviewed
Probab=26.33 E-value=1e+02 Score=27.11 Aligned_cols=44 Identities=16% Similarity=0.175 Sum_probs=29.2
Q ss_pred HHHHHHhcCCeEEECccccccc---cCcc----cHHHHHHcCCcEEEcCCCC
Q 015784 289 EIGLLSRAGVKVSHCPASAMRM---LGFA----PIKEMLHADICVSLGTDGA 333 (400)
Q Consensus 289 ~i~~~~~~~~~~~~~p~~~~~~---~~~~----~~~~~~~~Gv~v~~gtD~~ 333 (400)
-++.+++.|+.+.+.- +.++. .... -++++.+.|+++++|||.-
T Consensus 202 il~~~~~~g~~lEINt-sgl~~~~~~~~yP~~~il~~~~e~g~~itlgSDAH 252 (270)
T PRK08123 202 ILALIKKRGYELDFNT-AGLRKPYCGEPYPPGEIITLAKKLGIPLVYGSDAH 252 (270)
T ss_pred HHHHHHHcCCEEEEEc-hhhcCCCCCCCCCcHHHHHHHHHcCCCEEEeCCCC
Confidence 3577788898887653 32321 1122 3466778899999999964
No 222
>PRK07315 fructose-bisphosphate aldolase; Provisional
Probab=25.91 E-value=3.5e+02 Score=24.22 Aligned_cols=16 Identities=6% Similarity=0.248 Sum_probs=8.2
Q ss_pred HHHHc--CCeeeEecCCC
Q 015784 231 MAREF--KTGIHMHVAEI 246 (400)
Q Consensus 231 ~a~~~--~~~v~~H~~~~ 246 (400)
++++. ++||.+|.+..
T Consensus 70 ~a~~~~~~vPV~lHLDH~ 87 (293)
T PRK07315 70 LVESMGITVPVAIHLDHG 87 (293)
T ss_pred HHHHcCCCCcEEEECCCC
Confidence 34444 44566665544
No 223
>COG1751 Uncharacterized conserved protein [Function unknown]
Probab=25.47 E-value=2.7e+02 Score=22.03 Aligned_cols=43 Identities=19% Similarity=0.283 Sum_probs=25.2
Q ss_pred ChhHHHHHHhcCCeEEECcccc--------ccccCcccH------HHHHHcCCcEEE
Q 015784 286 NHTEIGLLSRAGVKVSHCPASA--------MRMLGFAPI------KEMLHADICVSL 328 (400)
Q Consensus 286 ~~~~i~~~~~~~~~~~~~p~~~--------~~~~~~~~~------~~~~~~Gv~v~~ 328 (400)
+++.-+.++++|..+..+.... -++.|+.|+ -||+.+|++|++
T Consensus 72 ~~E~~~~L~erGa~v~~~sHalSg~eRsis~kfGG~~p~eiiAetLR~fg~G~KVcv 128 (186)
T COG1751 72 DEEVRKELKERGAKVLTQSHALSGVERSISRKFGGYSPLEIIAETLRMFGQGVKVCV 128 (186)
T ss_pred CHHHHHHHHHcCceeeeehhhhhcchhhhhhhcCCcchHHHHHHHHHHhcCCcEEEE
Confidence 4455577788888776553311 123455443 347788888773
No 224
>PRK13352 thiamine biosynthesis protein ThiC; Provisional
Probab=25.44 E-value=5.8e+02 Score=24.11 Aligned_cols=35 Identities=9% Similarity=0.082 Sum_probs=24.5
Q ss_pred cCCHHHHHHHHHHHHHcCCe-eeEecCCCchhhhHH
Q 015784 219 NATDRLLLETRDMAREFKTG-IHMHVAEIPYENQVV 253 (400)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~-v~~H~~~~~~~~~~~ 253 (400)
.++++.+...++.-.+.|+. +.+||.-+....+.+
T Consensus 139 ~mt~d~~~~~ie~qa~~GVDfmTiHcGi~~~~~~~~ 174 (431)
T PRK13352 139 DMTEDDLFDVIEKQAKDGVDFMTIHCGVTRETLERL 174 (431)
T ss_pred hCCHHHHHHHHHHHHHhCCCEEEEccchhHHHHHHH
Confidence 45777777777777777887 789997665544433
No 225
>cd01725 LSm2 The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form the core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel beta-sheet. LSm2 is one of at least seven subunits that assemble onto U6 snRNA to form a seven-membered ring structure. Sm-like proteins exist in archaea as well as prokaryotes that form heptameric and hexameric ring structures similar to those found in eukaryotes.
Probab=25.37 E-value=1.8e+02 Score=20.16 Aligned_cols=38 Identities=11% Similarity=0.157 Sum_probs=25.3
Q ss_pred cccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecC
Q 015784 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQ 55 (400)
Q Consensus 18 ~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~ 55 (400)
-+.+.++|+.+.+.++......-+.+.|++..|..|.-
T Consensus 34 ~MNi~L~n~~~~~~~~~~~~~~~~~v~IRG~~I~~I~l 71 (81)
T cd01725 34 YLNIKLTNISVTDPEKYPHMLSVKNCFIRGSVVRYVQL 71 (81)
T ss_pred CcccEEEEEEEEcCCCcccccccCeEEEECCEEEEEEe
Confidence 34578888887754432222233579999999998874
No 226
>PF01116 F_bP_aldolase: Fructose-bisphosphate aldolase class-II; InterPro: IPR000771 Fructose-bisphosphate aldolase [, ] is a glycolytic enzyme that catalyses the reversible aldol cleavage or condensation of fructose-1,6-bisphosphate into dihydroxyacetone-phosphate and glyceraldehyde 3-phosphate. There are two classes of fructose-bisphosphate aldolases with different catalytic mechanisms. Class-II aldolases [], mainly found in prokaryotes and fungi, are homodimeric enzymes, which require a divalent metal ion, generally zinc, for their activity. This family also includes the Escherichia coli galactitol operon protein, gatY, which catalyses the transformation of tagatose 1,6-bisphosphate into glycerone phosphate and D-glyceraldehyde 3-phosphate; and E. coli N-acetyl galactosamine operon protein, agaY, which catalyses the same reaction. There are two histidine residues in the first half of the sequence of these enzymes that have been shown to be involved in binding a zinc ion [].; GO: 0008270 zinc ion binding, 0016832 aldehyde-lyase activity, 0005975 carbohydrate metabolic process; PDB: 3Q94_A 1RVG_B 1RV8_C 3C4U_A 3C56_B 3C52_A 2FJK_A 3N9R_P 3N9S_A 1GVF_B ....
Probab=25.21 E-value=4.9e+02 Score=23.21 Aligned_cols=42 Identities=12% Similarity=0.095 Sum_probs=24.5
Q ss_pred HHHHHHhcCcceee-ccCcCCH-------HHHHHHHHHcCCeEEEecccc
Q 015784 130 CGIELIHSGVTCFA-EAGGQHV-------SEMAKAVELLGLRACLVQSTM 171 (400)
Q Consensus 130 ~~~~~l~~GvTt~~-~~~~~~~-------~~~~~~~~~~g~~~~~~~~~~ 171 (400)
.+..++..|+|++. |.+.... ....+.++..|+..-...+.+
T Consensus 88 ~i~~ai~~GftSVM~DgS~l~~eeNi~~T~~vv~~ah~~gv~VEaElG~i 137 (287)
T PF01116_consen 88 DIKRAIDAGFTSVMIDGSALPFEENIAITREVVEYAHAYGVSVEAELGHI 137 (287)
T ss_dssp HHHHHHHHTSSEEEEE-TTS-HHHHHHHHHHHHHHHHHTT-EEEEEESBS
T ss_pred HHHHHHHhCcccccccCCcCCHHHHHHHHHHHHHhhhhhCCEEEEEeeee
Confidence 34668888999997 3442222 244677888787665444444
No 227
>PF03102 NeuB: NeuB family; InterPro: IPR013132 NeuB is the prokaryotic N-acetylneuraminic acid synthase (Neu5Ac). It catalyses the direct formation of Neu5Ac (the most common sialic acid) by condensation of phosphoenolpyruvate (PEP) and N-acetylmannosamine (ManNAc). This reaction has only been observed in prokaryotes; eukaryotes synthesise the 9-phosphate form, Neu5Ac-9-P, and utilise ManNAc-6-P instead of ManNAc. Such eukaryotic enzymes are not present in this family []. This family also contains SpsE spore coat polysaccharide biosynthesis proteins.; GO: 0016051 carbohydrate biosynthetic process; PDB: 3G8R_B 1XUU_A 1XUZ_A 3CM4_A 2ZDR_A 1VLI_A 2WQP_A.
Probab=24.99 E-value=2.7e+02 Score=24.08 Aligned_cols=67 Identities=12% Similarity=0.133 Sum_probs=40.0
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC-ChhHHHHHHhcC
Q 015784 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAG 297 (400)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~-~~~~i~~~~~~~ 297 (400)
.++.+...++.+.|++.|+...+-..+.. .++.+...++. .+=.....+ ....++.+++.|
T Consensus 52 el~~e~~~~L~~~~~~~gi~f~stpfd~~---------------s~d~l~~~~~~---~~KIaS~dl~n~~lL~~~A~tg 113 (241)
T PF03102_consen 52 ELSEEQHKELFEYCKELGIDFFSTPFDEE---------------SVDFLEELGVP---AYKIASGDLTNLPLLEYIAKTG 113 (241)
T ss_dssp SS-HHHHHHHHHHHHHTT-EEEEEE-SHH---------------HHHHHHHHT-S---EEEE-GGGTT-HHHHHHHHTT-
T ss_pred cCCHHHHHHHHHHHHHcCCEEEECCCCHH---------------HHHHHHHcCCC---EEEeccccccCHHHHHHHHHhC
Confidence 45788999999999999999877765333 45555555432 222232222 456788899988
Q ss_pred CeEEEC
Q 015784 298 VKVSHC 303 (400)
Q Consensus 298 ~~~~~~ 303 (400)
..+++.
T Consensus 114 kPvIlS 119 (241)
T PF03102_consen 114 KPVILS 119 (241)
T ss_dssp S-EEEE
T ss_pred CcEEEE
Confidence 886653
No 228
>KOG3985 consensus Methylthioadenosine phosphorylase MTAP [Nucleotide transport and metabolism]
Probab=24.89 E-value=4.4e+02 Score=22.52 Aligned_cols=53 Identities=26% Similarity=0.297 Sum_probs=32.8
Q ss_pred HHHHHHcCCc---EEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHH--HHHcCCCCC
Q 015784 316 IKEMLHADIC---VSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATING--AKSVLWDND 390 (400)
Q Consensus 316 ~~~~~~~Gv~---v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~--A~~lg~~~~ 390 (400)
.+.+.++|++ +++.||+- .|++ .++.++.+.+++..+.|. |+.|-++.
T Consensus 202 ~~LAkEagi~Y~~iamaTDYD-------cWr~-------------------~ee~Vtve~Vm~~~~~N~~kak~ll~~a- 254 (283)
T KOG3985|consen 202 AKLAKEAGIPYQMIAMATDYD-------CWRM-------------------EEEPVTVETVMKTLANNVRKAKILLLEA- 254 (283)
T ss_pred HHHHHhcCcchhhheeccchh-------hhhc-------------------cCCCccHHHHHHHHHhhhHHHHHHHHHH-
Confidence 4455677764 77888863 4421 244588888888888776 55554442
Q ss_pred ccccc
Q 015784 391 IGSLE 395 (400)
Q Consensus 391 ~G~i~ 395 (400)
+|+|+
T Consensus 255 v~~i~ 259 (283)
T KOG3985|consen 255 VGSIA 259 (283)
T ss_pred HHHhc
Confidence 45444
No 229
>PF02679 ComA: (2R)-phospho-3-sulfolactate synthase (ComA); InterPro: IPR003830 Methanogenic archaea produce methane via the anaerobic reduction of acetate or single carbon compounds []. Coenzyme M (CoM; 2-mercaptoethanesulphonic acid) serves as the terminal methyl carrier for this process. Previously thought to be unique to methanogenic archaea, CoM has also been found in methylotrophic bacteria. Biosynthesis of CoM begins with the Michael addition of sulphite to phosphoenolpyruvate, forming 2-phospho-3-sulpholactate (PSL). This reaction is catalyzed by members of this family, PSL synthase (ComA) []. Subsequently, PSL is dephosphorylated by phosphosulpholactate phosphatase (ComB) to form 3-sulpholactate [], which is then converted to 3-sulphopyruvate by L-sulpholactate dehydrogenase (ComC; 1.1.1.272 from EC) []. Sulphopyruvate decarboxylase (ComDE; 4.1.1.79 from EC) converts 3-sulphopyruvate to sulphoacetaldehyde []. Reductive thiolation of sulphoacetaldehyde is the final step.; GO: 0019295 coenzyme M biosynthetic process; PDB: 1U83_A 1QWG_A.
Probab=24.64 E-value=1e+02 Score=26.70 Aligned_cols=98 Identities=11% Similarity=0.006 Sum_probs=58.3
Q ss_pred HHHhcCcceeeccCcCCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEe
Q 015784 133 ELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWF 212 (400)
Q Consensus 133 ~~l~~GvTt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (400)
+.++-|..|..-+....+....+.+++.++..+.+...+.... ......+.++..+..+-..+.+
T Consensus 39 D~~K~g~Gt~~l~~~~~l~eki~l~~~~gV~v~~GGtl~E~a~-------------~q~~~~~yl~~~k~lGf~~IEi-- 103 (244)
T PF02679_consen 39 DFLKFGWGTSALYPEEILKEKIDLAHSHGVYVYPGGTLFEVAY-------------QQGKFDEYLEECKELGFDAIEI-- 103 (244)
T ss_dssp SEEEE-TTGGGGSTCHHHHHHHHHHHCTT-EEEE-HHHHHHHH-------------HTT-HHHHHHHHHHCT-SEEEE--
T ss_pred cEEEecCceeeecCHHHHHHHHHHHHHcCCeEeCCcHHHHHHH-------------hcChHHHHHHHHHHcCCCEEEe--
Confidence 3555666666666656678888899999998877765543210 0113445555555654444433
Q ss_pred eccccccCCHHHHHHHHHHHHHcCCeeeEecCCC
Q 015784 213 GIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 246 (400)
Q Consensus 213 ~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~ 246 (400)
..+...++.+....+++.+++.|+.+...+..-
T Consensus 104 -SdGti~l~~~~r~~~I~~~~~~Gf~v~~EvG~K 136 (244)
T PF02679_consen 104 -SDGTIDLPEEERLRLIRKAKEEGFKVLSEVGKK 136 (244)
T ss_dssp ---SSS---HHHHHHHHHHHCCTTSEEEEEES-S
T ss_pred -cCCceeCCHHHHHHHHHHHHHCCCEEeecccCC
Confidence 234467788889999999999999999988743
No 230
>COG0117 RibD Pyrimidine deaminase [Coenzyme metabolism]
Probab=24.11 E-value=75 Score=24.82 Aligned_cols=19 Identities=26% Similarity=0.256 Sum_probs=15.7
Q ss_pred eceeEEEeCCEEEEecCCh
Q 015784 39 RNGGVFVVQDRIKAIGQSA 57 (400)
Q Consensus 39 ~~~~i~v~~g~I~~vg~~~ 57 (400)
.-++|+|+||+|+..|-..
T Consensus 29 ~VG~VIV~~~~Ivg~G~h~ 47 (146)
T COG0117 29 SVGCVIVKDGEIVGEGYHE 47 (146)
T ss_pred ceeEEEEECCEEEeeeecC
Confidence 4579999999999999543
No 231
>PRK09282 pyruvate carboxylase subunit B; Validated
Probab=23.65 E-value=7.6e+02 Score=24.82 Aligned_cols=103 Identities=14% Similarity=0.010 Sum_probs=55.5
Q ss_pred HHHHHHhcCcceeeccCcC----CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCC
Q 015784 130 CGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAAD 205 (400)
Q Consensus 130 ~~~~~l~~GvTt~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (400)
.++.+.+.|+..++.+... ......+.+++.|....... ++..++. .+ ++...+..++....+.
T Consensus 101 ~v~~A~~~Gvd~irif~~lnd~~n~~~~i~~ak~~G~~v~~~i-~~t~~p~--------~t---~~~~~~~a~~l~~~Ga 168 (592)
T PRK09282 101 FVEKAAENGIDIFRIFDALNDVRNMEVAIKAAKKAGAHVQGTI-SYTTSPV--------HT---IEKYVELAKELEEMGC 168 (592)
T ss_pred HHHHHHHCCCCEEEEEEecChHHHHHHHHHHHHHcCCEEEEEE-EeccCCC--------CC---HHHHHHHHHHHHHcCC
Confidence 3466788899998876422 23445677778887654332 2222211 11 2223333333333332
Q ss_pred CCeEEEeeccccccCCHHHHHHHHHHHHH-cCCeeeEecCCCc
Q 015784 206 GRIRIWFGIRQIMNATDRLLLETRDMARE-FKTGIHMHVAEIP 247 (400)
Q Consensus 206 ~~~~~~~~~~~~~~~~~e~l~~~~~~a~~-~~~~v~~H~~~~~ 247 (400)
..+ .-....-...|+.+.++++..++ .++++.+|+.++.
T Consensus 169 d~I---~i~Dt~G~~~P~~~~~lv~~lk~~~~~pi~~H~Hnt~ 208 (592)
T PRK09282 169 DSI---CIKDMAGLLTPYAAYELVKALKEEVDLPVQLHSHCTS 208 (592)
T ss_pred CEE---EECCcCCCcCHHHHHHHHHHHHHhCCCeEEEEEcCCC
Confidence 222 22223345677788888877655 4788888887543
No 232
>PRK06801 hypothetical protein; Provisional
Probab=23.42 E-value=4e+02 Score=23.80 Aligned_cols=25 Identities=16% Similarity=0.222 Sum_probs=14.2
Q ss_pred CHHHHHHHHHHHHHcCCeeeEecCC
Q 015784 221 TDRLLLETRDMAREFKTGIHMHVAE 245 (400)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~v~~H~~~ 245 (400)
+.+.++.+++.|++.+.|+.+-...
T Consensus 27 n~e~~~avi~AAe~~~~PvIl~~~~ 51 (286)
T PRK06801 27 DSHFLRALFAAAKQERSPFIINIAE 51 (286)
T ss_pred CHHHHHHHHHHHHHHCCCEEEEeCc
Confidence 4555666666666666665555443
No 233
>TIGR03586 PseI pseudaminic acid synthase.
Probab=23.14 E-value=3.8e+02 Score=24.46 Aligned_cols=90 Identities=13% Similarity=0.122 Sum_probs=52.1
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEec-CCChhHHHHHHhcCC
Q 015784 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTV-WVNHTEIGLLSRAGV 298 (400)
Q Consensus 220 ~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~-~~~~~~i~~~~~~~~ 298 (400)
++.+...++.+.|++.|+.+..-..+.. .++.+..+++. .+-.... ......++.+++.|.
T Consensus 74 l~~e~~~~L~~~~~~~Gi~~~stpfd~~---------------svd~l~~~~v~---~~KI~S~~~~n~~LL~~va~~gk 135 (327)
T TIGR03586 74 TPWEWHKELFERAKELGLTIFSSPFDET---------------AVDFLESLDVP---AYKIASFEITDLPLIRYVAKTGK 135 (327)
T ss_pred CCHHHHHHHHHHHHHhCCcEEEccCCHH---------------HHHHHHHcCCC---EEEECCccccCHHHHHHHHhcCC
Confidence 4677889999999999999988876544 34445554432 1111211 224567888888888
Q ss_pred eEEECccccccccCc-ccHHHHHHcCC-cEEE
Q 015784 299 KVSHCPASAMRMLGF-APIKEMLHADI-CVSL 328 (400)
Q Consensus 299 ~~~~~p~~~~~~~~~-~~~~~~~~~Gv-~v~~ 328 (400)
.+...--.. .+..+ ..+..+.+.|. .+++
T Consensus 136 PvilstG~~-t~~Ei~~Av~~i~~~g~~~i~L 166 (327)
T TIGR03586 136 PIIMSTGIA-TLEEIQEAVEACREAGCKDLVL 166 (327)
T ss_pred cEEEECCCC-CHHHHHHHHHHHHHCCCCcEEE
Confidence 766432211 11111 23444556675 4555
No 234
>PF04748 Polysacc_deac_2: Divergent polysaccharide deacetylase; InterPro: IPR006837 This is a family of uncharacterised proteins that includes YibQ.; PDB: 2QV5_A 2NLY_A.
Probab=22.93 E-value=4.7e+02 Score=22.11 Aligned_cols=108 Identities=9% Similarity=-0.075 Sum_probs=56.3
Q ss_pred HhcCcceeeccCcCCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeec
Q 015784 135 IHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGI 214 (400)
Q Consensus 135 l~~GvTt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (400)
+-.-+|-.......+.....+.+++.|...++.......+. ..+....-.......+....++.....--+.+.+.-+.
T Consensus 19 Lp~pvT~ai~P~~~~~~~~a~~a~~~G~EvllhlPMep~~~-~~~gp~~L~~~~~~~~i~~~l~~al~~vp~a~GvnNhm 97 (213)
T PF04748_consen 19 LPFPVTFAILPYAPYSREWAERARAAGHEVLLHLPMEPKGY-KDPGPGALLTGMSEEEIRKRLEAALARVPGAVGVNNHM 97 (213)
T ss_dssp SSTTCEEEEETTSTTHHHHHHHHHHCT-EEEEEEEE--TTT-T---TT-B-TTS-HHHHHHHHHHHHCCSTT-SEEEEEE
T ss_pred CCCCeEEEECCCCCChHHHHHHHHHcCCEEEEeCCCCCCCC-CCcccccccCCCCHHHHHHHHHHHHHHCCCcEEEecCC
Confidence 33455655555557788888888888887776655444432 11111111111222334444444433323345554555
Q ss_pred cccccCCHHHHHHHHHHHHHcCCeee-Eec
Q 015784 215 RQIMNATDRLLLETRDMAREFKTGIH-MHV 243 (400)
Q Consensus 215 ~~~~~~~~e~l~~~~~~a~~~~~~v~-~H~ 243 (400)
.+.++.+.+.|..+++.++++|+-+. .+.
T Consensus 98 GS~~T~~~~~m~~vl~~l~~~gl~FvDS~T 127 (213)
T PF04748_consen 98 GSRFTSDREAMRWVLEVLKERGLFFVDSRT 127 (213)
T ss_dssp -CCHHC-HHHHHHHHHHHHHTT-EEEE-S-
T ss_pred CccccCCHHHHHHHHHHHHHcCCEEEeCCC
Confidence 56678888999999999999998854 444
No 235
>PRK14040 oxaloacetate decarboxylase; Provisional
Probab=22.80 E-value=7.9e+02 Score=24.71 Aligned_cols=102 Identities=14% Similarity=0.063 Sum_probs=55.1
Q ss_pred HHHHHHhcCcceeeccCcC----CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCC
Q 015784 130 CGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAAD 205 (400)
Q Consensus 130 ~~~~~l~~GvTt~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (400)
.++.+.+.|+..++.+... ......+.+++.|.......++. .++ ... .....+..+.....+.
T Consensus 102 ~v~~a~~~Gid~~rifd~lnd~~~~~~ai~~ak~~G~~~~~~i~yt-~~p--------~~~---~~~~~~~a~~l~~~Ga 169 (593)
T PRK14040 102 FVERAVKNGMDVFRVFDAMNDPRNLETALKAVRKVGAHAQGTLSYT-TSP--------VHT---LQTWVDLAKQLEDMGV 169 (593)
T ss_pred HHHHHHhcCCCEEEEeeeCCcHHHHHHHHHHHHHcCCeEEEEEEEe-eCC--------ccC---HHHHHHHHHHHHHcCC
Confidence 4466888999999876421 23345677888887643222221 111 011 2233333444433332
Q ss_pred CCeEEEeeccccccCCHHHHHHHHHHHHH-cCCeeeEecCCC
Q 015784 206 GRIRIWFGIRQIMNATDRLLLETRDMARE-FKTGIHMHVAEI 246 (400)
Q Consensus 206 ~~~~~~~~~~~~~~~~~e~l~~~~~~a~~-~~~~v~~H~~~~ 246 (400)
..+ .-....-...|+.+.++++..++ .++++.+|+..+
T Consensus 170 d~i---~i~Dt~G~l~P~~~~~lv~~lk~~~~~pi~~H~Hnt 208 (593)
T PRK14040 170 DSL---CIKDMAGLLKPYAAYELVSRIKKRVDVPLHLHCHAT 208 (593)
T ss_pred CEE---EECCCCCCcCHHHHHHHHHHHHHhcCCeEEEEECCC
Confidence 222 22223345677778777776554 578888888754
No 236
>TIGR01521 FruBisAldo_II_B fructose-bisphosphate aldolase, class II, Calvin cycle subtype. Members of this family are class II examples of the enzyme fructose-bisphosphate aldolase, an enzyme both of glycolysis and (in the opposite direction) of the Calvin cycle of CO2 fixation. A deep split separates the tightly conserved yeast/E. coli/Mycobacterium subtype (all species lacking the Calvin cycle) represented by model TIGR01520 from a broader group of aldolases that includes both tagatose- and fructose-bisphosphate aldolases. This model represents a distinct, elongated, very well conserved subtype within the latter group. Most species with this aldolase subtype have the Calvin cycle.
Probab=22.77 E-value=5.3e+02 Score=23.77 Aligned_cols=84 Identities=5% Similarity=-0.150 Sum_probs=47.5
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC-ChhHHHHHHhcC
Q 015784 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAG 297 (400)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~-~~~~i~~~~~~~ 297 (400)
..+.|.++.+++.|.+.+.|+.+-+.+........... ...+..+.... ..-.++.|..|- +.+.+.+..+.|
T Consensus 23 ~~n~e~~~aii~AAEe~~sPvIlq~s~~~~~~~g~~~~----~~~~~~~ae~~--~~VPValHLDHg~~~e~i~~Ai~~G 96 (347)
T TIGR01521 23 VNNMEQMRAIMEAADKTDSPVILQASRGARSYAGAPFL----RHLILAAIEEY--PHIPVVMHQDHGNSPATCQRAIQLG 96 (347)
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEECCcchhhhCCHHHH----HHHHHHHHHhC--CCCcEEEECCCCCCHHHHHHHHHcC
Confidence 45677888888888888888887776543221100000 00122111111 012566777775 567788888888
Q ss_pred CeEEECccccc
Q 015784 298 VKVSHCPASAM 308 (400)
Q Consensus 298 ~~~~~~p~~~~ 308 (400)
..-++.-.|..
T Consensus 97 FtSVMiDgS~l 107 (347)
T TIGR01521 97 FTSVMMDGSLR 107 (347)
T ss_pred CCEEeecCcCC
Confidence 77655555543
No 237
>PF14903 WG_beta_rep: WG containing repeat
Probab=22.71 E-value=72 Score=17.33 Aligned_cols=15 Identities=27% Similarity=0.465 Sum_probs=10.7
Q ss_pred EEeCCCcEeeecccc
Q 015784 70 IIDLQSQILLPGFVN 84 (400)
Q Consensus 70 viD~~g~~v~PG~iD 84 (400)
.||.+|+.|+|---|
T Consensus 3 ~id~~G~~vi~~~yd 17 (35)
T PF14903_consen 3 YIDKNGKIVIPPKYD 17 (35)
T ss_pred EEeCCCCEEEEcccc
Confidence 578888888885433
No 238
>PF01116 F_bP_aldolase: Fructose-bisphosphate aldolase class-II; InterPro: IPR000771 Fructose-bisphosphate aldolase [, ] is a glycolytic enzyme that catalyses the reversible aldol cleavage or condensation of fructose-1,6-bisphosphate into dihydroxyacetone-phosphate and glyceraldehyde 3-phosphate. There are two classes of fructose-bisphosphate aldolases with different catalytic mechanisms. Class-II aldolases [], mainly found in prokaryotes and fungi, are homodimeric enzymes, which require a divalent metal ion, generally zinc, for their activity. This family also includes the Escherichia coli galactitol operon protein, gatY, which catalyses the transformation of tagatose 1,6-bisphosphate into glycerone phosphate and D-glyceraldehyde 3-phosphate; and E. coli N-acetyl galactosamine operon protein, agaY, which catalyses the same reaction. There are two histidine residues in the first half of the sequence of these enzymes that have been shown to be involved in binding a zinc ion [].; GO: 0008270 zinc ion binding, 0016832 aldehyde-lyase activity, 0005975 carbohydrate metabolic process; PDB: 3Q94_A 1RVG_B 1RV8_C 3C4U_A 3C56_B 3C52_A 2FJK_A 3N9R_P 3N9S_A 1GVF_B ....
Probab=22.60 E-value=1.8e+02 Score=25.92 Aligned_cols=24 Identities=8% Similarity=0.141 Sum_probs=12.3
Q ss_pred CHHHHHHHHHHHHHcCCeeeEecC
Q 015784 221 TDRLLLETRDMAREFKTGIHMHVA 244 (400)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~v~~H~~ 244 (400)
+.+.+..+++.|++.+.|+.+-..
T Consensus 26 n~e~~~avi~AAe~~~sPvIlq~~ 49 (287)
T PF01116_consen 26 NLETARAVIEAAEELNSPVILQIS 49 (287)
T ss_dssp SHHHHHHHHHHHHHTTS-EEEEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEEcc
Confidence 345555555555555555555544
No 239
>PRK07709 fructose-bisphosphate aldolase; Provisional
Probab=22.45 E-value=5.6e+02 Score=22.86 Aligned_cols=40 Identities=15% Similarity=0.112 Sum_probs=23.9
Q ss_pred HHHHHhcCcceee-ccCcCCH-------HHHHHHHHHcCCeEEEeccc
Q 015784 131 GIELIHSGVTCFA-EAGGQHV-------SEMAKAVELLGLRACLVQST 170 (400)
Q Consensus 131 ~~~~l~~GvTt~~-~~~~~~~-------~~~~~~~~~~g~~~~~~~~~ 170 (400)
+.+++..|+|++. |.+.... ....+.+...|+..-...+.
T Consensus 93 i~~ai~~GftSVM~DgS~lp~eeNi~~Trevv~~Ah~~gv~VEaElG~ 140 (285)
T PRK07709 93 CKEAIDAGFTSVMIDASHHPFEENVETTKKVVEYAHARNVSVEAELGT 140 (285)
T ss_pred HHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEec
Confidence 3568888999988 3432222 34466777777755443333
No 240
>PF00944 Peptidase_S3: Alphavirus core protein ; InterPro: IPR000930 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. Togavirin, also known as Sindbis virus core endopeptidase, is a serine protease resident at the N terminus of the p130 polyprotein of togaviruses []. The endopeptidase signature identifies the peptidase as belonging to the MEROPS peptidase family S3 (togavirin family, clan PA(S)). The polyprotein also includes structural proteins for the nucleocapsid core and for the glycoprotein spikes []. Togavirin is only active while part of the polyprotein, cleavage at a Trp-Ser bond resulting in total lack of activity []. Mutagenesis studies have identified the location of the His-Asp-Ser catalytic triad, and X-ray studies have revealed the protein fold to be similar to that of chymotrypsin [, ].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis, 0016020 membrane; PDB: 2YEW_D 1EP5_A 3J0C_F 1EP6_C 1WYK_D 1DYL_A 1VCQ_B 1VCP_B 1LD4_D 1KXA_A ....
Probab=22.38 E-value=1.1e+02 Score=23.61 Aligned_cols=37 Identities=14% Similarity=0.215 Sum_probs=24.3
Q ss_pred eeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEe
Q 015784 38 FRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQIL 78 (400)
Q Consensus 38 ~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v 78 (400)
++.++|.+++||+.-=..... + .+++..+.|-.|++|
T Consensus 84 whhGaVqy~~grftip~g~g~-~---GDSGRpi~DNsGrVV 120 (158)
T PF00944_consen 84 WHHGAVQYSNGRFTIPTGVGK-P---GDSGRPIFDNSGRVV 120 (158)
T ss_dssp ETTEEEEEETTEEEEETTS-S-T---TSTTEEEESTTSBEE
T ss_pred cccceEEEeCCeEEeccCCCC-C---CCCCCccCcCCCCEE
Confidence 478899999999974321111 0 123567899999865
No 241
>cd01733 LSm10 The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form the core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel beta-sheet. LSm10 is an SmD1-like protein which is thought to bind U7 snRNA along with LSm11 and five other Sm subunits to form a 7-member ring structure. LSm10 and the U7 snRNP of which it is a part are thought to play an important role in histone mRNA 3' processing.
Probab=22.33 E-value=2e+02 Score=19.77 Aligned_cols=34 Identities=12% Similarity=0.204 Sum_probs=21.4
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEec
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIG 54 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg 54 (400)
+.+.++|+.+++.++. ...-+.+.|.+..|..|-
T Consensus 43 MNl~L~~~~~~~~~~~--~~~~~~v~IRG~nI~yI~ 76 (78)
T cd01733 43 MNIRLAKVTIIDRNGK--QVQVEEIMVTGRNIRYVH 76 (78)
T ss_pred ceeEEEEEEEEcCCCc--eeECCcEEEECCEEEEEE
Confidence 4567777777754432 223457888888887763
No 242
>PRK09196 fructose-1,6-bisphosphate aldolase; Reviewed
Probab=22.22 E-value=5.7e+02 Score=23.59 Aligned_cols=85 Identities=6% Similarity=-0.153 Sum_probs=48.2
Q ss_pred ccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC-ChhHHHHHHhc
Q 015784 218 MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRA 296 (400)
Q Consensus 218 ~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~-~~~~i~~~~~~ 296 (400)
...+.+.++.+++.|++.+.|+.+-+............. ...+..+.... ..-.++.|..|- +.+.+.+..+.
T Consensus 24 N~~n~e~~~avi~AAee~~sPvIiq~s~~~~~~~g~~~~----~~~~~~~a~~~--~~VPValHLDHg~~~e~i~~ai~~ 97 (347)
T PRK09196 24 NVNNLEQVQAIMEAADETDSPVILQASAGARKYAGEPFL----RHLILAAVEEY--PHIPVVMHQDHGNSPATCQRAIQL 97 (347)
T ss_pred eeCCHHHHHHHHHHHHHhCCCEEEECCccHhhhCCHHHH----HHHHHHHHHhC--CCCcEEEECCCCCCHHHHHHHHHc
Confidence 345677888899999999999888776543211100000 00122222111 002466787775 45777888888
Q ss_pred CCeEEECccccc
Q 015784 297 GVKVSHCPASAM 308 (400)
Q Consensus 297 ~~~~~~~p~~~~ 308 (400)
|..-++.-.|.+
T Consensus 98 GftSVMiDgS~l 109 (347)
T PRK09196 98 GFTSVMMDGSLK 109 (347)
T ss_pred CCCEEEecCCCC
Confidence 877655555544
No 243
>PRK15108 biotin synthase; Provisional
Probab=21.98 E-value=6.3e+02 Score=23.24 Aligned_cols=18 Identities=6% Similarity=-0.101 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHHHcCCee
Q 015784 222 DRLLLETRDMAREFKTGI 239 (400)
Q Consensus 222 ~e~l~~~~~~a~~~~~~v 239 (400)
.+.+.++++.+++.++.+
T Consensus 110 ~e~i~~~i~~ik~~~i~v 127 (345)
T PRK15108 110 MPYLEQMVQGVKAMGLET 127 (345)
T ss_pred HHHHHHHHHHHHhCCCEE
Confidence 344555555555544443
No 244
>COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only]
Probab=21.78 E-value=1.5e+02 Score=25.30 Aligned_cols=98 Identities=18% Similarity=0.283 Sum_probs=54.2
Q ss_pred hHHHHHHhcCCe-EEECccccccccCcccHHHHHHcCCcE-EEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCC
Q 015784 288 TEIGLLSRAGVK-VSHCPASAMRMLGFAPIKEMLHADICV-SLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDP 365 (400)
Q Consensus 288 ~~i~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~Gv~v-~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (400)
++++.+++.++. ++++|..|-.-....-+..+.+.|++- .+--||... ....++.. ...+..-+.++
T Consensus 118 ~QL~LA~e~dvPviVHTPr~nK~e~t~~ildi~~~~~l~~~lvvIDH~N~----etv~~vld-------~e~~vGlTvqP 186 (254)
T COG1099 118 EQLELARELDVPVIVHTPRRNKKEATSKILDILIESGLKPSLVVIDHVNE----ETVDEVLD-------EEFYVGLTVQP 186 (254)
T ss_pred HHHHHHHHcCCcEEEeCCCCcchhHHHHHHHHHHHcCCChhheehhcccH----HHHHHHHh-------ccceEEEEecC
Confidence 356667777877 677887763211112234444555532 234566432 12221111 11112223567
Q ss_pred CCCCHHHHHHHHhHHHHHHcCCCCCcccccc
Q 015784 366 AALPAETVLRMATINGAKSVLWDNDIGSLEA 396 (400)
Q Consensus 366 ~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~ 396 (400)
.++++++|+...+..++.-+=++...|+...
T Consensus 187 gKlt~~eAveIV~ey~~~r~ilnSD~~s~~s 217 (254)
T COG1099 187 GKLTVEEAVEIVREYGAERIILNSDAGSAAS 217 (254)
T ss_pred CcCCHHHHHHHHHHhCcceEEEecccccccc
Confidence 8899999999999998776655555676543
No 245
>COG0191 Fba Fructose/tagatose bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=21.73 E-value=5.8e+02 Score=22.75 Aligned_cols=98 Identities=9% Similarity=0.071 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhccCCCCCeEEEeeccccccC-CHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHh
Q 015784 190 IQSQKELYAKHHHAADGRIRIWFGIRQIMNA-TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLD 268 (400)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (400)
.+.....++.........+--...-...+.- ......-+..+++++++||.+|.+... ..+...
T Consensus 28 lE~~~AileaA~e~~sPvIiq~S~g~~~y~gg~~~~~~~v~~~a~~~~vPV~lHlDHg~---------------~~~~~~ 92 (286)
T COG0191 28 LETLQAILEAAEEEKSPVIIQFSEGAAKYAGGADSLAHMVKALAEKYGVPVALHLDHGA---------------SFEDCK 92 (286)
T ss_pred HHHHHHHHHHHHHhCCCEEEEecccHHHHhchHHHHHHHHHHHHHHCCCCEEEECCCCC---------------CHHHHH
Q ss_pred HhCCCCCCeeeEEecCCChhH--------HHHHHhcCCeEEE
Q 015784 269 KIEFLQNNLLSAHTVWVNHTE--------IGLLSRAGVKVSH 302 (400)
Q Consensus 269 ~~~~~~~~~~~~h~~~~~~~~--------i~~~~~~~~~~~~ 302 (400)
.....+...+...+.+...++ ++.+.+.|+.|..
T Consensus 93 ~ai~~GFsSvMiDgS~~~~eENi~~tkevv~~ah~~gvsVEa 134 (286)
T COG0191 93 QAIRAGFSSVMIDGSHLPFEENIAITKEVVEFAHAYGVSVEA 134 (286)
T ss_pred HHHhcCCceEEecCCcCCHHHHHHHHHHHHHHHHHcCCcEEE
No 246
>cd01317 DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth.
Probab=21.60 E-value=4.4e+02 Score=24.41 Aligned_cols=132 Identities=18% Similarity=0.187 Sum_probs=71.4
Q ss_pred CcEEeCCCcEeeecccccCcCCcccccccccCCCChhHhhhhccccccCCCC-hhhHHHHHHHHHHHHHhcCcceeeccC
Q 015784 68 DQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMT-EEDSYISTLLCGIELIHSGVTCFAEAG 146 (400)
Q Consensus 68 ~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~GvTt~~~~~ 146 (400)
.++||++|++|+||+||+|+|+... .++ .++... ..+.++.+|||++.++.
T Consensus 2 ~~~iD~~g~~vlPG~iD~HvH~~~~------------------------~~~~~e~~~s----~s~aA~~GGvTtii~~p 53 (374)
T cd01317 2 AEVIDAEGKILAPGLVDLHVHLREP------------------------GFEYKETLES----GAKAAAAGGFTTVVCMP 53 (374)
T ss_pred CeEEECCCCEEecCEEeeccccCCC------------------------CccccchHHH----HHHHHHhCCCcEEEECC
Confidence 4789999999999999999999651 111 122222 33678999999999986
Q ss_pred cCC-----HHHHH---HHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccc
Q 015784 147 GQH-----VSEMA---KAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIM 218 (400)
Q Consensus 147 ~~~-----~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (400)
... ..... +.++......+.....+.. + .....+.+..++. .. + +..+. .....
T Consensus 54 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~---~~~~~~~~i~~l~----~~--G-~~~~k-~~~~~ 115 (374)
T cd01317 54 NTNPVIDNPAVVELLKNRAKDVGIVRVLPIGALTK-------G---LKGEELTEIGELL----EA--G-AVGFS-DDGKP 115 (374)
T ss_pred CCCCCCCCHHHHHHHHHHhccCCceeEEEEEEEee-------C---CCcccHHHHHHHH----HC--C-cEEEE-cCCcC
Confidence 322 22222 2222212111111111100 0 0011122222221 11 1 12111 11122
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEecCC
Q 015784 219 NATDRLLLETRDMAREFKTGIHMHVAE 245 (400)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~v~~H~~~ 245 (400)
..+.+.+.++++.+++.|.++.+|+.+
T Consensus 116 ~~~~~~l~~~~~~~~~~g~~v~~H~E~ 142 (374)
T cd01317 116 IQDAELLRRALEYAAMLDLPIIVHPED 142 (374)
T ss_pred CCCHHHHHHHHHHHHhcCCeEEEecCC
Confidence 356778999999999999999999943
No 247
>PRK07709 fructose-bisphosphate aldolase; Provisional
Probab=21.43 E-value=5.1e+02 Score=23.14 Aligned_cols=11 Identities=9% Similarity=0.214 Sum_probs=5.6
Q ss_pred CeeeEecCCCc
Q 015784 237 TGIHMHVAEIP 247 (400)
Q Consensus 237 ~~v~~H~~~~~ 247 (400)
+||.+|.+...
T Consensus 78 VPV~lHLDHg~ 88 (285)
T PRK07709 78 VPVAIHLDHGS 88 (285)
T ss_pred CcEEEECCCCC
Confidence 45555554443
No 248
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=21.09 E-value=5.2e+02 Score=22.00 Aligned_cols=95 Identities=16% Similarity=0.159 Sum_probs=52.9
Q ss_pred HHHHHhccCCCCCeEE-Eeeccccc--cCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhC
Q 015784 195 ELYAKHHHAADGRIRI-WFGIRQIM--NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIE 271 (400)
Q Consensus 195 ~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 271 (400)
+.+++....+.+.+.+ ++.-|+.. +..++.++.+-+ ...+++.+|..-.. +..++..+.
T Consensus 20 ~el~~~~~agad~iH~DVMDghFVPNiTfGp~~v~~l~~---~t~~p~DvHLMV~~---------------p~~~i~~fa 81 (220)
T COG0036 20 EELKALEAAGADLIHIDVMDGHFVPNITFGPPVVKALRK---ITDLPLDVHLMVEN---------------PDRYIEAFA 81 (220)
T ss_pred HHHHHHHHcCCCEEEEeccCCCcCCCcccCHHHHHHHhh---cCCCceEEEEecCC---------------HHHHHHHHH
Confidence 3344444443333332 23334444 344555554432 33688999976433 333444444
Q ss_pred CCCCCeeeEEecCC--ChhHHHHHHhcCCe--EEECcccc
Q 015784 272 FLQNNLLSAHTVWV--NHTEIGLLSRAGVK--VSHCPASA 307 (400)
Q Consensus 272 ~~~~~~~~~h~~~~--~~~~i~~~~~~~~~--~~~~p~~~ 307 (400)
..+..++..|.... -.+.++++++.|+. ++.+|.+.
T Consensus 82 ~agad~It~H~E~~~~~~r~i~~Ik~~G~kaGv~lnP~Tp 121 (220)
T COG0036 82 KAGADIITFHAEATEHIHRTIQLIKELGVKAGLVLNPATP 121 (220)
T ss_pred HhCCCEEEEEeccCcCHHHHHHHHHHcCCeEEEEECCCCC
Confidence 44567888888731 13568888888877 67777753
No 249
>PRK08610 fructose-bisphosphate aldolase; Reviewed
Probab=21.01 E-value=5.1e+02 Score=23.15 Aligned_cols=22 Identities=9% Similarity=0.040 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHcCCeeeEec
Q 015784 222 DRLLLETRDMAREFKTGIHMHV 243 (400)
Q Consensus 222 ~e~l~~~~~~a~~~~~~v~~H~ 243 (400)
.+.++.+++.|.+.+.|+.+-.
T Consensus 28 ~e~~~avi~AAee~~sPvIl~~ 49 (286)
T PRK08610 28 LEFTQAILEASQEENAPVILGV 49 (286)
T ss_pred HHHHHHHHHHHHHHCCCEEEEc
Confidence 3344444444444444444433
No 250
>PRK06806 fructose-bisphosphate aldolase; Provisional
Probab=20.94 E-value=4.7e+02 Score=23.26 Aligned_cols=26 Identities=23% Similarity=0.372 Sum_probs=14.7
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEecCC
Q 015784 220 ATDRLLLETRDMAREFKTGIHMHVAE 245 (400)
Q Consensus 220 ~~~e~l~~~~~~a~~~~~~v~~H~~~ 245 (400)
.+.|.++.+++.|.+.+.|+.+-..+
T Consensus 26 ~n~e~~~avi~aAe~~~~Pvii~~~~ 51 (281)
T PRK06806 26 ANMEMVMGAIKAAEELNSPIILQIAE 51 (281)
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEcCc
Confidence 34555666666666666665555443
No 251
>cd01723 LSm4 The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form the core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel beta-sheet. LSm4 is one of at least seven subunits that assemble onto U6 snRNA to form a seven-membered ring structure. Sm-like proteins exist in archaea as well as prokaryotes that form heptameric and hexameric ring structures similar to those found in eukaryotes.
Probab=20.85 E-value=2.4e+02 Score=19.17 Aligned_cols=36 Identities=11% Similarity=0.283 Sum_probs=24.5
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecC
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQ 55 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~ 55 (400)
+.+.++|++..+.+++ +...-+.+.|.+..|..|.-
T Consensus 35 mNi~L~~~~~~~~~g~-~~~~~~~v~IRG~~I~~i~~ 70 (76)
T cd01723 35 MNIHLREVICTSKDGD-KFWKMPECYIRGNTIKYLRV 70 (76)
T ss_pred CceEEEeEEEECCCCc-EeeeCCcEEEeCCEEEEEEc
Confidence 4578888888755543 12223579999999998863
No 252
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=20.49 E-value=5.4e+02 Score=21.88 Aligned_cols=72 Identities=15% Similarity=0.235 Sum_probs=43.1
Q ss_pred ccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC--hhHHHHHHh
Q 015784 218 MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSR 295 (400)
Q Consensus 218 ~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~--~~~i~~~~~ 295 (400)
.+..++.++.+-+. ..++++.+|..-.. +..++..+...+...+..|..... .+.++.+++
T Consensus 42 ~tfg~~~i~~i~~~--~~~~~~dvHLMv~~---------------p~~~i~~~~~~gad~i~~H~Ea~~~~~~~l~~ik~ 104 (220)
T PRK08883 42 LTFGAPICKALRDY--GITAPIDVHLMVKP---------------VDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKE 104 (220)
T ss_pred cccCHHHHHHHHHh--CCCCCEEEEeccCC---------------HHHHHHHHHHhCCCEEEEcccCcccHHHHHHHHHH
Confidence 34556666554321 03688999986433 334444444445668888887532 356788888
Q ss_pred cCCe--EEECccc
Q 015784 296 AGVK--VSHCPAS 306 (400)
Q Consensus 296 ~~~~--~~~~p~~ 306 (400)
.|+. +...|.+
T Consensus 105 ~g~k~GlalnP~T 117 (220)
T PRK08883 105 HGCQAGVVLNPAT 117 (220)
T ss_pred cCCcEEEEeCCCC
Confidence 8876 5566654
No 253
>PRK07998 gatY putative fructose-1,6-bisphosphate aldolase; Reviewed
Probab=20.32 E-value=4.4e+02 Score=23.50 Aligned_cols=18 Identities=11% Similarity=0.261 Sum_probs=10.1
Q ss_pred HHHHHHcCCeeeEecCCC
Q 015784 229 RDMAREFKTGIHMHVAEI 246 (400)
Q Consensus 229 ~~~a~~~~~~v~~H~~~~ 246 (400)
..+|++.++||.+|.+..
T Consensus 67 ~~~A~~~~vPV~lHLDH~ 84 (283)
T PRK07998 67 KRHADKMDVPVSLHLDHG 84 (283)
T ss_pred HHHHHHCCCCEEEECcCC
Confidence 344555666666666544
No 254
>PF10509 GalKase_gal_bdg: Galactokinase galactose-binding signature; InterPro: IPR019539 This entry represents a highly conserved galactokinase signature sequence which appears to be present in all galactokinases, irrespective of how many other ATP binding sites, etc that they carry []. The function of this domain appears to be to bind galactose [], and it is normally located at the N terminus of these enzymes []. It is associated with IPR013750 from INTERPRO and IPR006204 from INTERPRO. While all enzymes in this entry posses galactokinase activity, some are annotated as N-acetylgalactosamine kinases as they also posses this enzyme activity.; PDB: 1PIE_A 1WUU_A 1S4E_D 2A2C_A 2A2D_A 2AJ4_A 2DEJ_A 2CZ9_A 2DEI_A 3V5R_A ....
Probab=20.11 E-value=25 Score=22.02 Aligned_cols=34 Identities=21% Similarity=0.392 Sum_probs=23.9
Q ss_pred EEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCc
Q 015784 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (400)
Q Consensus 43 i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~ 90 (400)
++..=|||.-+|.. +|..|..|+|.-||..+.+.
T Consensus 15 ~~~APGRvnliGeH--------------tDy~gG~Vl~~Ai~~~~~~a 48 (52)
T PF10509_consen 15 VASAPGRVNLIGEH--------------TDYNGGFVLPAAIDLRTYVA 48 (52)
T ss_dssp EEEEEEEEEEE-TT---------------GGGT-EEEEEEEEEEEEEE
T ss_pred EEECCceEEecCcc--------------cccCCCeEEEEEeeccEEEE
Confidence 45556888877753 47899999999999887653
Done!