Query 015786
Match_columns 400
No_of_seqs 417 out of 2527
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 18:39:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015786.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015786hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1tv8_A MOAA, molybdenum cofact 100.0 1.2E-51 4E-56 395.9 35.9 325 75-400 4-340 (340)
2 3c8f_A Pyruvate formate-lyase 99.9 7.1E-25 2.4E-29 199.5 19.9 172 88-266 22-201 (245)
3 2yx0_A Radical SAM enzyme; pre 99.9 2.4E-23 8.2E-28 199.2 23.0 201 83-287 68-300 (342)
4 2a5h_A L-lysine 2,3-aminomutas 99.9 1.3E-23 4.5E-28 205.3 21.4 243 81-346 111-367 (416)
5 2z2u_A UPF0026 protein MJ0257; 99.9 6.2E-24 2.1E-28 200.7 17.1 198 83-289 49-280 (311)
6 3iix_A Biotin synthetase, puta 99.9 5.2E-22 1.8E-26 190.4 23.4 205 78-287 45-254 (348)
7 3rfa_A Ribosomal RNA large sub 99.9 3.3E-22 1.1E-26 192.4 19.2 183 85-273 115-321 (404)
8 3t7v_A Methylornithine synthas 99.8 4.9E-20 1.7E-24 176.7 20.9 209 78-291 53-270 (350)
9 1r30_A Biotin synthase; SAM ra 99.8 4E-19 1.4E-23 171.5 24.7 196 86-286 66-270 (369)
10 3can_A Pyruvate-formate lyase- 99.8 1.7E-19 5.9E-24 156.7 17.8 132 135-271 5-142 (182)
11 2qgq_A Protein TM_1862; alpha- 99.8 2.5E-17 8.5E-22 154.6 22.8 191 85-279 4-210 (304)
12 1olt_A Oxygen-independent copr 99.6 4.4E-15 1.5E-19 147.0 18.4 185 85-270 53-249 (457)
13 4fhd_A Spore photoproduct lyas 98.5 4.1E-07 1.4E-11 86.0 9.5 159 88-252 110-281 (368)
14 2cw6_A Hydroxymethylglutaryl-C 97.8 0.00026 8.8E-09 65.5 14.1 164 115-291 22-199 (298)
15 1ydn_A Hydroxymethylglutaryl-C 97.8 0.00054 1.8E-08 63.3 16.0 136 114-258 20-171 (295)
16 2ftp_A Hydroxymethylglutaryl-C 96.6 0.1 3.5E-06 48.0 16.8 138 114-258 24-175 (302)
17 3ivs_A Homocitrate synthase, m 96.5 0.051 1.7E-06 52.3 14.5 138 113-258 54-196 (423)
18 1ydo_A HMG-COA lyase; TIM-barr 96.3 0.095 3.3E-06 48.3 14.8 137 114-258 22-173 (307)
19 2ztj_A Homocitrate synthase; ( 96.0 0.087 3E-06 50.2 13.2 135 114-257 19-159 (382)
20 3ble_A Citramalate synthase fr 95.8 0.15 5E-06 47.7 13.4 165 114-291 35-212 (337)
21 3ewb_X 2-isopropylmalate synth 95.4 0.48 1.6E-05 43.2 15.1 168 113-292 20-194 (293)
22 3rmj_A 2-isopropylmalate synth 94.7 0.41 1.4E-05 45.2 12.8 166 114-291 28-200 (370)
23 2nx9_A Oxaloacetate decarboxyl 94.2 0.76 2.6E-05 44.7 13.8 130 115-258 25-174 (464)
24 1rqb_A Transcarboxylase 5S sub 94.0 0.65 2.2E-05 46.0 13.1 156 115-290 42-217 (539)
25 1nvm_A HOA, 4-hydroxy-2-oxoval 93.9 0.99 3.4E-05 42.2 13.7 157 114-290 24-191 (345)
26 3eeg_A 2-isopropylmalate synth 92.7 0.55 1.9E-05 43.5 9.7 166 114-291 22-194 (325)
27 1qwg_A PSL synthase;, (2R)-pho 90.4 8.7 0.0003 33.7 18.0 130 117-264 23-170 (251)
28 2y7e_A 3-keto-5-aminohexanoate 90.0 2.7 9.4E-05 37.8 11.0 129 114-253 28-165 (282)
29 1u83_A Phosphosulfolactate syn 89.7 7.1 0.00024 34.7 13.2 128 117-263 50-193 (276)
30 3lot_A Uncharacterized protein 89.6 5.2 0.00018 36.6 12.8 136 113-256 25-192 (314)
31 3chv_A Prokaryotic domain of u 88.0 4.3 0.00015 36.6 10.8 131 114-256 28-166 (284)
32 3e02_A Uncharacterized protein 87.8 10 0.00034 34.7 13.3 136 113-256 25-190 (311)
33 3e49_A Uncharacterized protein 87.1 8.1 0.00028 35.3 12.3 136 113-256 25-190 (311)
34 1ydn_A Hydroxymethylglutaryl-C 85.5 16 0.00054 32.9 13.6 122 117-253 152-280 (295)
35 3c6c_A 3-keto-5-aminohexanoate 85.4 9.9 0.00034 34.7 11.9 134 114-256 42-204 (316)
36 2ftp_A Hydroxymethylglutaryl-C 84.8 20 0.00069 32.4 13.9 123 116-253 155-284 (302)
37 3no5_A Uncharacterized protein 84.0 9 0.00031 34.3 10.8 128 113-253 23-160 (275)
38 3dxi_A Putative aldolase; TIM 82.5 13 0.00044 34.1 11.5 106 114-233 18-134 (320)
39 3dz1_A Dihydrodipicolinate syn 81.2 9 0.00031 35.0 10.0 108 114-233 23-141 (313)
40 2dqw_A Dihydropteroate synthas 80.9 16 0.00055 33.0 11.3 79 112-196 44-132 (294)
41 2d73_A Alpha-glucosidase SUSB; 80.5 19 0.00066 36.7 12.8 106 117-226 368-502 (738)
42 2nuw_A 2-keto-3-deoxygluconate 80.3 4.9 0.00017 36.3 7.8 108 114-232 14-129 (288)
43 3flu_A DHDPS, dihydrodipicolin 80.2 6 0.00021 35.9 8.4 109 114-233 22-140 (297)
44 1xky_A Dihydrodipicolinate syn 80.0 5.9 0.0002 36.0 8.3 108 114-232 27-144 (301)
45 3bg3_A Pyruvate carboxylase, m 79.9 53 0.0018 33.7 16.0 157 115-291 120-304 (718)
46 3si9_A DHDPS, dihydrodipicolin 79.7 5.7 0.0002 36.4 8.1 109 114-233 37-155 (315)
47 3l21_A DHDPS, dihydrodipicolin 79.0 14 0.00047 33.6 10.4 108 114-232 30-147 (304)
48 3na8_A Putative dihydrodipicol 78.5 5.7 0.0002 36.4 7.7 108 115-233 40-157 (315)
49 3cpr_A Dihydrodipicolinate syn 78.5 15 0.00052 33.3 10.6 108 115-233 32-149 (304)
50 3b4u_A Dihydrodipicolinate syn 78.3 17 0.00059 32.7 10.8 111 114-233 18-140 (294)
51 2wkj_A N-acetylneuraminate lya 78.2 15 0.0005 33.4 10.4 109 114-233 26-145 (303)
52 3fkr_A L-2-keto-3-deoxyarabona 78.1 5.5 0.00019 36.4 7.5 112 114-233 23-144 (309)
53 1w3i_A EDA, 2-keto-3-deoxy glu 78.0 5.6 0.00019 36.0 7.5 108 114-232 14-129 (293)
54 3s5o_A 4-hydroxy-2-oxoglutarat 77.7 14 0.00047 33.7 10.0 112 114-233 29-149 (307)
55 3qze_A DHDPS, dihydrodipicolin 77.5 5.7 0.0002 36.4 7.4 109 114-233 38-156 (314)
56 3tak_A DHDPS, dihydrodipicolin 77.2 6.3 0.00022 35.6 7.6 109 114-233 16-134 (291)
57 2r91_A 2-keto-3-deoxy-(6-phosp 77.1 5.5 0.00019 35.9 7.1 108 115-232 14-128 (286)
58 1aj0_A DHPS, dihydropteroate s 77.1 41 0.0014 30.1 12.8 80 112-196 30-119 (282)
59 1eye_A DHPS 1, dihydropteroate 76.6 42 0.0014 30.0 14.4 125 112-257 21-170 (280)
60 3a5f_A Dihydrodipicolinate syn 76.6 7.5 0.00026 35.1 7.9 105 117-232 19-133 (291)
61 2r8w_A AGR_C_1641P; APC7498, d 76.5 6.9 0.00023 36.2 7.7 108 114-232 49-166 (332)
62 1f6k_A N-acetylneuraminate lya 76.4 16 0.00056 32.9 10.1 109 114-233 18-137 (293)
63 3eb2_A Putative dihydrodipicol 76.3 5.6 0.00019 36.2 6.9 110 114-233 19-137 (300)
64 3inp_A D-ribulose-phosphate 3- 76.3 7.2 0.00025 34.3 7.4 117 124-261 100-222 (246)
65 2p0o_A Hypothetical protein DU 76.2 13 0.00046 34.7 9.5 144 118-266 15-180 (372)
66 3qfe_A Putative dihydrodipicol 75.7 5.9 0.0002 36.4 7.0 111 114-233 26-146 (318)
67 2v9d_A YAGE; dihydrodipicolini 75.3 7.3 0.00025 36.1 7.6 108 114-232 46-163 (343)
68 2hmc_A AGR_L_411P, dihydrodipi 74.3 14 0.00048 34.2 9.2 108 115-233 42-158 (344)
69 4dpp_A DHDPS 2, dihydrodipicol 74.3 9 0.00031 35.8 7.8 107 114-232 74-189 (360)
70 2yxg_A DHDPS, dihydrodipicolin 74.1 6.5 0.00022 35.5 6.8 107 115-232 16-132 (289)
71 3daq_A DHDPS, dihydrodipicolin 73.6 7.4 0.00025 35.2 7.0 107 116-233 19-135 (292)
72 3gnh_A L-lysine, L-arginine ca 73.6 54 0.0018 30.2 13.5 71 117-192 164-246 (403)
73 2rfg_A Dihydrodipicolinate syn 73.4 6.6 0.00023 35.6 6.6 107 115-232 16-132 (297)
74 4ay7_A Methylcobalamin\: coenz 73.4 53 0.0018 30.1 13.1 59 130-191 200-267 (348)
75 1o5k_A DHDPS, dihydrodipicolin 73.2 7.3 0.00025 35.5 6.9 107 115-232 28-144 (306)
76 2ehh_A DHDPS, dihydrodipicolin 72.8 18 0.00062 32.6 9.5 108 115-233 16-133 (294)
77 3eeg_A 2-isopropylmalate synth 72.6 42 0.0014 30.7 12.0 118 117-253 148-277 (325)
78 2ojp_A DHDPS, dihydrodipicolin 72.3 6.6 0.00022 35.5 6.3 108 114-232 16-133 (292)
79 3ovp_A Ribulose-phosphate 3-ep 72.2 15 0.00053 31.7 8.5 117 124-260 78-195 (228)
80 3a24_A Alpha-galactosidase; gl 71.5 64 0.0022 32.5 13.7 101 115-226 304-419 (641)
81 3m5v_A DHDPS, dihydrodipicolin 70.7 19 0.00063 32.6 9.0 108 115-233 23-141 (301)
82 3d0c_A Dihydrodipicolinate syn 70.4 17 0.00059 33.1 8.8 107 115-233 28-144 (314)
83 1r3s_A URO-D, uroporphyrinogen 69.8 70 0.0024 29.6 13.4 59 130-192 207-282 (367)
84 2eja_A URO-D, UPD, uroporphyri 69.6 37 0.0013 31.0 11.0 58 130-192 189-258 (338)
85 3vnd_A TSA, tryptophan synthas 69.3 37 0.0012 30.1 10.4 111 150-265 5-133 (267)
86 2vc6_A MOSA, dihydrodipicolina 68.9 8.4 0.00029 34.8 6.2 107 115-232 16-132 (292)
87 1nvm_A HOA, 4-hydroxy-2-oxoval 68.5 73 0.0025 29.3 13.4 117 117-253 146-269 (345)
88 3ble_A Citramalate synthase fr 67.7 75 0.0026 29.1 14.6 26 151-177 172-198 (337)
89 1mzh_A Deoxyribose-phosphate a 67.2 59 0.002 27.8 13.4 127 115-259 15-149 (225)
90 3ewb_X 2-isopropylmalate synth 66.8 72 0.0025 28.6 13.1 118 117-253 147-276 (293)
91 3cu2_A Ribulose-5-phosphate 3- 66.7 59 0.002 28.2 11.0 119 123-258 82-213 (237)
92 1qop_A Tryptophan synthase alp 66.3 64 0.0022 28.4 11.5 116 117-250 28-169 (268)
93 1qwg_A PSL synthase;, (2R)-pho 66.2 53 0.0018 28.8 10.4 108 115-231 50-167 (251)
94 2qf7_A Pyruvate carboxylase pr 66.1 82 0.0028 34.3 14.2 130 115-258 568-725 (1165)
95 3hq1_A 2-isopropylmalate synth 65.8 45 0.0016 33.5 11.2 137 113-254 86-238 (644)
96 2inf_A URO-D, UPD, uroporphyri 65.7 76 0.0026 29.2 12.4 58 130-192 203-271 (359)
97 2y5s_A DHPS, dihydropteroate s 65.4 34 0.0012 30.8 9.4 132 112-265 38-194 (294)
98 2nx9_A Oxaloacetate decarboxyl 65.4 97 0.0033 29.8 13.2 114 118-253 156-276 (464)
99 2vp8_A Dihydropteroate synthas 65.1 35 0.0012 31.1 9.5 81 112-197 57-147 (318)
100 3h5d_A DHDPS, dihydrodipicolin 65.0 26 0.00087 31.9 8.7 109 114-233 22-141 (311)
101 3e96_A Dihydrodipicolinate syn 64.2 24 0.00081 32.2 8.4 108 114-233 27-144 (316)
102 1tx2_A DHPS, dihydropteroate s 63.9 59 0.002 29.3 10.7 125 113-257 56-197 (297)
103 3inp_A D-ribulose-phosphate 3- 63.9 74 0.0025 27.7 11.5 113 117-249 37-155 (246)
104 3hbl_A Pyruvate carboxylase; T 63.4 1.4E+02 0.0047 32.5 15.3 129 116-258 551-708 (1150)
105 3gr7_A NADPH dehydrogenase; fl 62.7 32 0.0011 31.6 9.1 82 113-194 130-250 (340)
106 2ekc_A AQ_1548, tryptophan syn 62.5 80 0.0027 27.6 12.6 18 239-256 131-148 (262)
107 1ydo_A HMG-COA lyase; TIM-barr 62.0 73 0.0025 28.7 11.2 78 117-198 154-238 (307)
108 3nav_A Tryptophan synthase alp 61.6 60 0.0021 28.8 10.3 20 238-257 133-152 (271)
109 2pcq_A Putative dihydrodipicol 61.2 17 0.00057 32.6 6.6 106 114-233 13-125 (283)
110 1qys_A TOP7; alpha-beta, novel 60.1 28 0.00094 24.2 5.9 54 142-196 25-85 (106)
111 3ndc_A Precorrin-4 C(11)-methy 60.1 16 0.00056 32.3 6.3 53 117-171 60-112 (264)
112 4e16_A Precorrin-4 C(11)-methy 60.0 20 0.00068 31.5 6.8 54 117-172 61-114 (253)
113 4ab4_A Xenobiotic reductase B; 59.8 42 0.0014 31.2 9.3 83 113-195 139-264 (362)
114 2ekc_A AQ_1548, tryptophan syn 59.5 91 0.0031 27.3 11.7 117 117-251 28-170 (262)
115 4exq_A UPD, URO-D, uroporphyri 59.5 46 0.0016 31.0 9.6 58 131-192 208-279 (368)
116 2yci_X 5-methyltetrahydrofolat 59.5 94 0.0032 27.5 14.7 131 116-265 30-170 (271)
117 3hgj_A Chromate reductase; TIM 58.6 52 0.0018 30.3 9.7 84 113-196 138-262 (349)
118 3gka_A N-ethylmaleimide reduct 58.4 30 0.001 32.2 8.0 83 113-195 147-272 (361)
119 3tr9_A Dihydropteroate synthas 58.3 1.1E+02 0.0037 27.8 12.4 78 115-197 44-135 (314)
120 3fst_A 5,10-methylenetetrahydr 57.3 1.1E+02 0.0038 27.6 16.0 118 117-249 94-225 (304)
121 2ztj_A Homocitrate synthase; ( 56.5 88 0.003 29.2 11.0 116 118-253 143-267 (382)
122 1s4d_A Uroporphyrin-III C-meth 56.2 29 0.00098 30.9 7.3 55 116-172 75-129 (280)
123 1z41_A YQJM, probable NADH-dep 56.1 56 0.0019 29.9 9.5 83 113-195 130-251 (338)
124 3bg3_A Pyruvate carboxylase, m 55.5 1.4E+02 0.0048 30.5 12.9 118 117-253 258-380 (718)
125 1x7f_A Outer surface protein; 55.2 39 0.0013 31.7 8.1 139 117-258 38-200 (385)
126 3ivs_A Homocitrate synthase, m 55.0 87 0.003 29.8 10.7 15 359-373 393-407 (423)
127 3hh1_A Tetrapyrrole methylase 54.8 44 0.0015 25.2 7.2 46 120-168 67-113 (117)
128 3apt_A Methylenetetrahydrofola 54.5 1.2E+02 0.0042 27.3 13.7 44 117-160 83-137 (310)
129 1z41_A YQJM, probable NADH-dep 54.2 58 0.002 29.8 9.3 74 117-193 226-307 (338)
130 2cw6_A Hydroxymethylglutaryl-C 54.2 1.2E+02 0.0041 27.0 13.9 121 117-253 153-281 (298)
131 3krb_A Aldose reductase; ssgci 53.5 87 0.003 28.5 10.3 141 117-266 35-204 (334)
132 3sho_A Transcriptional regulat 53.4 88 0.003 25.3 10.2 91 116-226 23-115 (187)
133 2lqo_A Putative glutaredoxin R 52.9 4.4 0.00015 29.7 1.0 31 133-163 55-85 (92)
134 3ovp_A Ribulose-phosphate 3-ep 52.9 84 0.0029 26.9 9.5 112 117-248 14-132 (228)
135 1rqb_A Transcarboxylase 5S sub 51.7 1.4E+02 0.0047 29.4 11.8 114 118-253 173-295 (539)
136 3cqj_A L-ribulose-5-phosphate 51.6 55 0.0019 28.8 8.5 77 118-196 106-197 (295)
137 3vni_A Xylose isomerase domain 51.5 1.2E+02 0.0042 26.3 11.4 45 122-168 19-65 (294)
138 3erp_A Putative oxidoreductase 50.9 1.5E+02 0.0051 27.1 12.4 136 117-266 61-220 (353)
139 4i6k_A Amidohydrolase family p 50.6 1.3E+02 0.0045 26.5 12.1 122 117-257 53-175 (294)
140 2wm8_A MDP-1, magnesium-depend 50.5 61 0.0021 26.3 8.1 28 144-173 67-94 (187)
141 1tqj_A Ribulose-phosphate 3-ep 49.4 1.2E+02 0.0042 25.8 13.9 99 119-237 16-121 (230)
142 3cyv_A URO-D, UPD, uroporphyri 47.7 1.5E+02 0.0053 26.9 11.2 60 130-192 197-269 (354)
143 1cbf_A Cobalt-precorrin-4 tran 47.6 36 0.0012 30.3 6.5 55 117-173 77-131 (285)
144 3p6l_A Sugar phosphate isomera 47.3 1.3E+02 0.0046 25.6 10.3 93 149-259 23-132 (262)
145 1j93_A UROD, uroporphyrinogen 46.2 1.4E+02 0.0046 27.3 10.5 59 130-192 203-273 (353)
146 2r14_A Morphinone reductase; H 46.2 45 0.0015 31.2 7.1 83 113-195 152-277 (377)
147 3l8h_A Putative haloacid dehal 46.0 34 0.0012 27.4 5.7 27 146-174 28-54 (179)
148 2qf7_A Pyruvate carboxylase pr 45.6 2E+02 0.0069 31.2 13.0 118 117-253 706-827 (1165)
149 3ngf_A AP endonuclease, family 45.6 65 0.0022 27.9 7.9 78 118-197 91-187 (269)
150 2zvr_A Uncharacterized protein 45.5 1.5E+02 0.0052 25.7 10.8 101 120-226 41-162 (290)
151 3q12_A Pantoate--beta-alanine 44.7 1.7E+02 0.0058 26.1 11.0 137 117-261 8-176 (287)
152 3tva_A Xylose isomerase domain 44.6 97 0.0033 27.0 9.0 78 117-197 99-186 (290)
153 2ybo_A Methyltransferase; SUMT 44.3 44 0.0015 30.0 6.5 54 117-172 86-139 (294)
154 3iwp_A Copper homeostasis prot 44.0 58 0.002 29.1 7.1 68 126-195 172-240 (287)
155 1jub_A Dihydroorotate dehydrog 43.9 1.7E+02 0.006 26.0 11.0 75 179-258 112-188 (311)
156 1f76_A Dihydroorotate dehydrog 43.8 98 0.0034 28.1 9.1 75 116-193 221-318 (336)
157 3l5l_A Xenobiotic reductase A; 43.7 66 0.0023 29.8 7.9 84 113-196 144-269 (363)
158 1yx1_A Hypothetical protein PA 43.5 59 0.002 28.1 7.2 75 120-197 84-165 (264)
159 3ctl_A D-allulose-6-phosphate 43.5 1.6E+02 0.0053 25.3 14.0 112 118-249 11-127 (231)
160 1ve2_A Uroporphyrin-III C-meth 43.2 54 0.0018 28.1 6.8 56 116-173 61-116 (235)
161 2gou_A Oxidoreductase, FMN-bin 42.5 1.2E+02 0.0041 28.1 9.4 83 113-195 147-272 (365)
162 1va0_A Uroporphyrin-III C-meth 41.2 53 0.0018 28.2 6.5 58 116-175 58-115 (239)
163 1f6y_A 5-methyltetrahydrofolat 41.2 1.8E+02 0.0062 25.4 14.2 124 115-257 20-153 (262)
164 3rr1_A GALD, putative D-galact 40.9 2.2E+02 0.0076 26.6 11.2 139 117-258 124-283 (405)
165 4avf_A Inosine-5'-monophosphat 40.9 2.3E+02 0.0078 27.3 11.5 118 123-249 231-352 (490)
166 4d9a_A 2-pyrone-4,6-dicarbaxyl 40.9 1.9E+02 0.0066 25.6 10.7 124 115-258 52-176 (303)
167 3l5a_A NADH/flavin oxidoreduct 40.4 1.3E+02 0.0044 28.5 9.4 82 114-196 157-288 (419)
168 1vrd_A Inosine-5'-monophosphat 39.9 2.4E+02 0.0083 27.0 11.7 72 120-197 236-310 (494)
169 3hbl_A Pyruvate carboxylase; T 39.6 2.7E+02 0.0094 30.2 12.8 119 116-253 688-810 (1150)
170 3gr7_A NADPH dehydrogenase; fl 39.6 1.1E+02 0.0037 28.0 8.6 32 136-168 213-248 (340)
171 4fxs_A Inosine-5'-monophosphat 39.4 2.7E+02 0.0093 26.9 11.9 121 126-259 236-360 (496)
172 3lmz_A Putative sugar isomeras 39.2 1E+02 0.0035 26.3 8.1 18 118-135 59-76 (257)
173 2dsk_A Chitinase; catalytic do 39.2 2.2E+02 0.0074 25.7 11.0 72 183-267 108-182 (311)
174 1h1y_A D-ribulose-5-phosphate 39.0 61 0.0021 27.7 6.4 116 125-259 79-198 (228)
175 1jub_A Dihydroorotate dehydrog 39.0 1.6E+02 0.0055 26.2 9.6 75 118-193 104-192 (311)
176 2e6f_A Dihydroorotate dehydrog 39.0 1.9E+02 0.0066 25.7 10.2 88 166-258 96-191 (314)
177 3ctl_A D-allulose-6-phosphate 38.9 73 0.0025 27.4 6.8 117 125-258 72-191 (231)
178 2oz8_A MLL7089 protein; struct 38.9 2.4E+02 0.0082 26.1 11.7 90 117-231 201-295 (389)
179 2r8c_A Putative amidohydrolase 38.9 1.4E+02 0.0049 27.6 9.7 70 117-191 172-253 (426)
180 3p6l_A Sugar phosphate isomera 38.6 81 0.0028 27.1 7.3 72 119-196 90-165 (262)
181 3qxb_A Putative xylose isomera 38.3 1.9E+02 0.0066 25.5 10.1 125 124-251 39-200 (316)
182 3k13_A 5-methyltetrahydrofolat 37.5 2.3E+02 0.0077 25.4 13.3 125 115-257 32-171 (300)
183 3up8_A Putative 2,5-diketo-D-g 37.4 1.7E+02 0.0058 26.1 9.4 130 118-266 45-186 (298)
184 1qop_A Tryptophan synthase alp 37.3 2.1E+02 0.0071 24.9 13.4 59 166-224 20-91 (268)
185 3tjl_A NADPH dehydrogenase; OL 37.2 1.2E+02 0.0042 28.5 8.6 82 113-194 153-287 (407)
186 2hsa_B 12-oxophytodienoate red 37.1 78 0.0027 29.8 7.3 83 113-195 157-288 (402)
187 3b0p_A TRNA-dihydrouridine syn 37.0 1.1E+02 0.0036 28.2 8.1 73 117-193 141-225 (350)
188 1q7z_A 5-methyltetrahydrofolat 36.9 3.2E+02 0.011 26.9 14.2 121 117-257 337-467 (566)
189 3rmj_A 2-isopropylmalate synth 36.7 2.6E+02 0.0089 25.9 13.9 118 117-253 154-283 (370)
190 3ngj_A Deoxyribose-phosphate a 36.4 2.1E+02 0.0072 24.7 13.2 127 116-258 39-173 (239)
191 1vp5_A 2,5-diketo-D-gluconic a 36.4 2.3E+02 0.0079 25.2 10.7 129 119-266 38-180 (298)
192 3b0p_A TRNA-dihydrouridine syn 36.1 1.9E+02 0.0066 26.4 9.7 75 119-194 69-165 (350)
193 1wa3_A 2-keto-3-deoxy-6-phosph 36.1 1.8E+02 0.0062 23.9 11.2 77 116-201 18-96 (205)
194 3f7j_A YVGN protein; aldo-keto 36.0 2.2E+02 0.0076 24.9 10.3 129 118-266 29-169 (276)
195 2fpr_A Histidine biosynthesis 36.0 90 0.0031 25.1 6.8 26 145-172 42-67 (176)
196 4f40_A Prostaglandin F2-alpha 35.9 2.3E+02 0.0077 25.0 10.0 120 120-250 35-166 (288)
197 3hgj_A Chromate reductase; TIM 35.9 1.6E+02 0.0055 26.9 9.2 23 118-140 237-259 (349)
198 2fli_A Ribulose-phosphate 3-ep 35.8 1.5E+02 0.0052 24.6 8.5 111 126-250 77-190 (220)
199 3tva_A Xylose isomerase domain 35.7 2.2E+02 0.0074 24.6 12.7 116 125-252 26-175 (290)
200 2qbu_A Precorrin-2 methyltrans 35.7 2E+02 0.0067 24.2 13.7 64 120-188 81-144 (232)
201 2obb_A Hypothetical protein; s 35.7 59 0.002 25.7 5.2 67 188-261 4-71 (142)
202 1w8s_A FBP aldolase, fructose- 35.7 2.2E+02 0.0076 24.8 11.3 127 118-262 39-179 (263)
203 1twd_A Copper homeostasis prot 35.6 94 0.0032 27.3 6.9 65 126-193 134-198 (256)
204 3feq_A Putative amidohydrolase 35.1 1.5E+02 0.005 27.3 9.0 70 117-191 169-250 (423)
205 1vyr_A Pentaerythritol tetrani 34.8 1.2E+02 0.0042 28.0 8.2 83 113-195 147-273 (364)
206 2yxb_A Coenzyme B12-dependent 34.5 1.1E+02 0.0038 24.5 6.9 71 115-189 54-124 (161)
207 3khj_A Inosine-5-monophosphate 34.5 2.8E+02 0.0094 25.5 12.6 115 124-249 108-227 (361)
208 3oa3_A Aldolase; structural ge 34.5 2.5E+02 0.0085 25.0 15.4 127 115-258 69-204 (288)
209 2og9_A Mandelate racemase/muco 34.4 2E+02 0.007 26.6 9.8 137 117-258 161-312 (393)
210 3a5v_A Alpha-galactosidase; be 34.1 1.6E+02 0.0053 27.6 8.8 78 117-196 23-132 (397)
211 3i4k_A Muconate lactonizing en 34.0 2.8E+02 0.0097 25.5 12.1 96 117-232 205-302 (383)
212 1i60_A IOLI protein; beta barr 33.9 1.8E+02 0.0062 24.8 9.0 78 118-197 82-176 (278)
213 2gou_A Oxidoreductase, FMN-bin 33.6 1.4E+02 0.0046 27.7 8.3 17 150-167 252-268 (365)
214 2bdq_A Copper homeostasis prot 33.4 1.6E+02 0.0054 25.2 7.9 66 123-193 136-207 (224)
215 3r12_A Deoxyribose-phosphate a 33.3 2.5E+02 0.0085 24.6 14.8 127 116-258 55-189 (260)
216 1m5w_A Pyridoxal phosphate bio 33.1 2.4E+02 0.0082 24.4 10.4 115 121-248 78-204 (243)
217 3qc0_A Sugar isomerase; TIM ba 33.0 1.7E+02 0.006 24.9 8.7 43 117-164 18-60 (275)
218 3gk0_A PNP synthase, pyridoxin 32.8 2.5E+02 0.0087 24.7 9.1 88 150-247 144-231 (278)
219 1f76_A Dihydroorotate dehydrog 32.8 2.7E+02 0.0094 25.0 12.2 71 186-259 165-242 (336)
220 2gjl_A Hypothetical protein PA 32.8 1.9E+02 0.0064 26.1 9.0 60 123-193 86-145 (328)
221 3lmz_A Putative sugar isomeras 32.7 2.3E+02 0.0078 24.0 12.1 71 122-193 32-109 (257)
222 2vef_A Dihydropteroate synthas 32.4 1.9E+02 0.0067 26.0 8.9 80 112-196 25-114 (314)
223 2l82_A Designed protein OR32; 32.4 1.5E+02 0.0053 22.0 10.8 92 150-260 15-108 (162)
224 3l5l_A Xenobiotic reductase A; 32.3 1.1E+02 0.0036 28.4 7.3 22 119-140 245-266 (363)
225 4hb7_A Dihydropteroate synthas 32.3 2.6E+02 0.009 24.6 12.1 75 112-191 22-106 (270)
226 3ajx_A 3-hexulose-6-phosphate 31.8 1.9E+02 0.0065 23.8 8.3 74 117-196 10-87 (207)
227 1nu5_A Chloromuconate cycloiso 31.8 2.2E+02 0.0075 26.0 9.5 96 117-232 199-296 (370)
228 2e0n_A Precorrin-2 C20-methylt 31.5 57 0.0019 28.5 5.0 51 120-172 83-133 (259)
229 3do6_A Formate--tetrahydrofola 31.4 1.4E+02 0.0049 28.8 7.8 50 211-261 346-395 (543)
230 2pgw_A Muconate cycloisomerase 31.3 2.7E+02 0.0094 25.6 10.1 97 117-233 201-299 (384)
231 3dip_A Enolase; structural gen 31.2 3E+02 0.01 25.7 10.4 96 117-232 224-322 (410)
232 2pp0_A L-talarate/galactarate 31.2 2.5E+02 0.0085 26.1 9.8 137 117-258 174-325 (398)
233 3ffs_A Inosine-5-monophosphate 31.1 3.3E+02 0.011 25.4 11.0 66 124-195 147-214 (400)
234 2yl5_A Beta-N-acetylhexosamini 31.0 96 0.0033 29.6 6.9 61 113-175 18-122 (442)
235 2v5c_A O-GLCNACASE NAGJ; glyco 30.7 1.6E+02 0.0055 29.3 8.6 83 114-198 160-270 (594)
236 2z6i_A Trans-2-enoyl-ACP reduc 30.6 1.2E+02 0.0043 27.4 7.4 61 122-193 77-137 (332)
237 3exr_A RMPD (hexulose-6-phosph 30.4 2.5E+02 0.0084 23.7 12.6 115 116-247 14-130 (221)
238 3ol0_A De novo designed monome 30.3 28 0.00095 22.0 1.9 31 326-356 12-42 (48)
239 3nut_A Precorrin-3 methylase; 30.3 2.6E+02 0.0089 24.0 11.9 110 124-253 70-189 (251)
240 3kws_A Putative sugar isomeras 30.3 2.1E+02 0.0073 24.7 8.8 75 119-195 103-198 (287)
241 3bo9_A Putative nitroalkan dio 30.2 1.8E+02 0.006 26.3 8.3 60 123-193 92-151 (326)
242 4as2_A Phosphorylcholine phosp 30.1 79 0.0027 28.8 5.9 55 116-172 104-168 (327)
243 3zwt_A Dihydroorotate dehydrog 30.1 1.4E+02 0.0047 27.7 7.6 76 117-193 231-327 (367)
244 3rcn_A Beta-N-acetylhexosamini 30.0 96 0.0033 30.5 6.8 60 113-174 148-250 (543)
245 3dx5_A Uncharacterized protein 29.7 2.7E+02 0.0091 23.9 11.2 124 117-251 15-162 (286)
246 1eep_A Inosine 5'-monophosphat 29.7 3.4E+02 0.012 25.1 11.0 69 123-197 155-226 (404)
247 3civ_A Endo-beta-1,4-mannanase 29.6 2.1E+02 0.0073 26.1 8.8 51 212-262 53-117 (343)
248 3bw2_A 2-nitropropane dioxygen 29.6 2.5E+02 0.0087 25.7 9.5 61 122-192 111-171 (369)
249 2qde_A Mandelate racemase/muco 29.4 3.2E+02 0.011 25.3 10.2 135 118-258 145-294 (397)
250 3dx5_A Uncharacterized protein 29.3 2.2E+02 0.0075 24.5 8.7 78 118-197 82-174 (286)
251 1rvk_A Isomerase/lactonizing e 29.3 3.3E+02 0.011 24.9 10.7 96 117-232 211-309 (382)
252 1tv5_A Dhodehase, dihydroorota 29.1 93 0.0032 29.8 6.3 103 116-226 307-429 (443)
253 2jvf_A De novo protein M7; tet 29.0 50 0.0017 22.5 3.1 38 211-251 31-69 (96)
254 3o6c_A PNP synthase, pyridoxin 29.0 2.9E+02 0.01 24.1 10.4 114 120-247 76-223 (260)
255 3fvv_A Uncharacterized protein 29.0 1.7E+02 0.0057 24.1 7.6 60 117-188 72-132 (232)
256 3usb_A Inosine-5'-monophosphat 29.0 4E+02 0.014 25.7 11.3 124 123-259 258-385 (511)
257 2yw3_A 4-hydroxy-2-oxoglutarat 29.0 2.3E+02 0.008 23.6 8.3 68 118-193 23-90 (207)
258 1ps9_A 2,4-dienoyl-COA reducta 28.9 1.6E+02 0.0053 29.7 8.4 74 117-193 225-310 (671)
259 1k77_A EC1530, hypothetical pr 28.9 1.8E+02 0.0062 24.6 8.0 78 118-197 83-180 (260)
260 3rcy_A Mandelate racemase/muco 28.9 2.6E+02 0.0088 26.5 9.5 138 117-258 145-308 (433)
261 2q02_A Putative cytoplasmic pr 28.8 1.7E+02 0.0057 25.0 7.8 74 119-195 84-170 (272)
262 2ox4_A Putative mandelate race 28.8 3.5E+02 0.012 25.0 11.0 140 115-258 143-314 (403)
263 1mdl_A Mandelate racemase; iso 28.7 3E+02 0.01 24.9 9.9 136 118-258 144-294 (359)
264 3o3r_A Aldo-keto reductase fam 28.7 2.8E+02 0.0095 24.7 9.4 124 118-249 24-172 (316)
265 1vyr_A Pentaerythritol tetrani 28.7 2E+02 0.0068 26.5 8.5 8 84-91 175-182 (364)
266 1yht_A DSPB; beta barrel, hydr 28.5 1.3E+02 0.0043 27.9 7.1 60 114-175 27-122 (367)
267 2pgw_A Muconate cycloisomerase 28.5 3.5E+02 0.012 24.8 12.3 135 117-258 146-295 (384)
268 1geq_A Tryptophan synthase alp 28.4 2.7E+02 0.0093 23.6 10.6 114 123-257 98-215 (248)
269 1ep3_A Dihydroorotate dehydrog 28.4 2.5E+02 0.0084 24.8 9.0 75 118-193 109-196 (311)
270 2nql_A AGR_PAT_674P, isomerase 28.3 2E+02 0.0069 26.6 8.6 135 118-258 164-312 (388)
271 1mzr_A 2,5-diketo-D-gluconate 28.0 3.2E+02 0.011 24.2 12.1 130 119-266 48-187 (296)
272 1lwj_A 4-alpha-glucanotransfer 28.0 91 0.0031 29.5 6.2 52 208-259 19-87 (441)
273 3ngf_A AP endonuclease, family 27.7 2.8E+02 0.0097 23.6 10.8 42 116-164 22-63 (269)
274 3s5u_A Putative uncharacterize 27.7 1.4E+02 0.0048 25.5 6.6 56 211-266 146-201 (220)
275 3kru_A NADH:flavin oxidoreduct 27.4 1.8E+02 0.0063 26.5 7.9 80 112-193 128-249 (343)
276 3apt_A Methylenetetrahydrofola 27.4 3.4E+02 0.012 24.3 12.9 101 177-289 33-137 (310)
277 3qhq_A CSN2, SAG0897 family cr 27.4 1.4E+02 0.0049 25.6 6.7 56 211-266 146-201 (229)
278 2yl6_A Beta-N-acetylhexosamini 27.2 1.1E+02 0.0039 29.0 6.6 61 113-175 15-119 (434)
279 1vhn_A Putative flavin oxidore 26.9 3.1E+02 0.011 24.5 9.4 73 119-193 70-160 (318)
280 3nd1_A Precorrin-6A synthase/C 26.9 62 0.0021 28.7 4.4 48 122-170 112-160 (275)
281 1tzz_A Hypothetical protein L1 26.5 3.8E+02 0.013 24.6 11.6 137 117-257 164-318 (392)
282 4aie_A Glucan 1,6-alpha-glucos 26.4 79 0.0027 30.7 5.6 52 208-259 28-97 (549)
283 2dh2_A 4F2 cell-surface antige 26.4 97 0.0033 29.3 6.0 84 176-261 39-141 (424)
284 2pr7_A Haloacid dehalogenase/e 26.4 1.9E+02 0.0066 21.1 8.3 30 144-175 17-46 (137)
285 3etn_A Putative phosphosugar i 26.3 1.6E+02 0.0053 24.8 6.8 15 212-226 120-136 (220)
286 1pjq_A CYSG, siroheme synthase 26.0 74 0.0025 30.5 5.1 68 116-188 276-343 (457)
287 3aty_A Tcoye, prostaglandin F2 25.9 2.4E+02 0.0082 26.1 8.5 84 113-196 159-289 (379)
288 2blf_B SORB, sulfite\:cytochro 25.9 59 0.002 22.7 3.3 51 98-159 28-79 (81)
289 2qgy_A Enolase from the enviro 25.8 2.3E+02 0.0077 26.3 8.4 96 117-232 205-302 (391)
290 2zds_A Putative DNA-binding pr 25.7 2.6E+02 0.0088 24.7 8.7 78 118-197 109-212 (340)
291 3fxa_A SIS domain protein; str 25.6 1.1E+02 0.0039 25.0 5.8 91 117-226 29-120 (201)
292 3inn_A Pantothenate synthetase 25.6 2.2E+02 0.0074 25.7 7.7 136 117-262 26-193 (314)
293 1tzz_A Hypothetical protein L1 25.5 2.4E+02 0.0083 26.0 8.6 96 117-232 221-325 (392)
294 3bdk_A D-mannonate dehydratase 25.4 3.7E+02 0.013 24.9 9.7 42 125-168 35-82 (386)
295 3aty_A Tcoye, prostaglandin F2 25.4 2E+02 0.0069 26.7 7.9 20 148-168 266-285 (379)
296 1hjs_A Beta-1,4-galactanase; 4 24.8 1.3E+02 0.0046 27.3 6.4 60 168-235 23-82 (332)
297 1rpx_A Protein (ribulose-phosp 24.8 2.8E+02 0.0097 23.2 8.3 61 124-190 82-144 (230)
298 3ktc_A Xylose isomerase; putat 24.5 3.7E+02 0.013 23.8 10.5 110 116-234 32-167 (333)
299 1tqj_A Ribulose-phosphate 3-ep 24.5 2.4E+02 0.0081 24.0 7.7 113 125-249 77-192 (230)
300 2lnd_A De novo designed protei 24.5 1.8E+02 0.0063 20.3 7.0 43 118-163 36-78 (112)
301 3tdn_A FLR symmetric alpha-bet 24.4 1.9E+02 0.0065 24.6 7.2 69 122-193 37-108 (247)
302 1pzr_A Erythronolide synthase; 24.3 21 0.0007 23.8 0.5 9 139-147 14-22 (60)
303 4dwd_A Mandelate racemase/muco 24.2 3.5E+02 0.012 25.1 9.4 96 117-232 202-298 (393)
304 1mi3_A Xylose reductase, XR; a 24.1 3.8E+02 0.013 23.8 10.9 141 117-266 26-197 (322)
305 3kwp_A Predicted methyltransfe 24.1 1.5E+02 0.0052 26.5 6.5 62 120-187 76-138 (296)
306 1wyz_A Putative S-adenosylmeth 24.0 1.2E+02 0.004 26.1 5.6 49 119-170 70-119 (242)
307 3obe_A Sugar phosphate isomera 23.8 3.7E+02 0.013 23.6 12.6 112 121-260 37-168 (305)
308 3n6q_A YGHZ aldo-keto reductas 23.6 4E+02 0.014 23.9 11.9 128 117-257 40-188 (346)
309 2r14_A Morphinone reductase; H 23.4 1.8E+02 0.0062 27.0 7.2 19 149-168 256-274 (377)
310 2v5d_A O-GLCNACASE NAGJ; famil 23.3 2.2E+02 0.0074 29.2 8.3 83 114-198 160-270 (737)
311 3toy_A Mandelate racemase/muco 23.3 4.4E+02 0.015 24.2 10.4 138 117-258 166-318 (383)
312 2npn_A Putative cobalamin synt 23.3 77 0.0026 27.4 4.3 40 131-171 100-141 (251)
313 4fo4_A Inosine 5'-monophosphat 23.2 4.4E+02 0.015 24.2 12.1 65 125-195 112-179 (366)
314 1uas_A Alpha-galactosidase; TI 23.1 4.3E+02 0.015 24.0 13.2 78 117-196 23-133 (362)
315 2z1k_A (NEO)pullulanase; hydro 22.9 1.3E+02 0.0046 28.5 6.4 61 176-237 53-121 (475)
316 1tkk_A Similar to chloromucona 22.8 4.3E+02 0.015 23.9 10.0 116 117-255 196-315 (366)
317 2zqe_A MUTS2 protein; alpha/be 22.7 1.5E+02 0.005 20.9 4.9 40 117-156 12-57 (83)
318 2gl5_A Putative dehydratase pr 22.5 4.6E+02 0.016 24.2 10.2 140 115-258 147-323 (410)
319 3ayv_A Putative uncharacterize 22.3 3E+02 0.01 23.1 8.0 75 119-196 75-163 (254)
320 1k77_A EC1530, hypothetical pr 22.3 3.5E+02 0.012 22.7 8.7 47 117-170 15-61 (260)
321 3ozy_A Putative mandelate race 22.2 4.6E+02 0.016 24.1 10.7 93 117-229 206-301 (389)
322 3ag6_A Pantothenate synthetase 22.2 3.1E+02 0.011 24.3 8.0 133 118-260 7-171 (283)
323 3qas_B Undecaprenyl pyrophosph 22.1 3.3E+02 0.011 23.6 8.1 30 119-148 47-78 (253)
324 2o56_A Putative mandelate race 22.1 4.7E+02 0.016 24.1 11.8 136 116-258 150-320 (407)
325 3aam_A Endonuclease IV, endoiv 22.1 3.2E+02 0.011 23.2 8.3 95 117-219 85-192 (270)
326 3f4w_A Putative hexulose 6 pho 22.0 3.3E+02 0.011 22.3 9.3 115 125-259 69-184 (211)
327 2z6r_A Diphthine synthase; met 22.0 1.2E+02 0.0042 26.3 5.5 39 133-173 77-115 (265)
328 3gh5_A HEX1, beta-hexosaminida 22.0 2.1E+02 0.0072 28.0 7.5 60 113-174 192-282 (525)
329 3vup_A Beta-1,4-mannanase; TIM 21.9 1.4E+02 0.0046 26.2 5.9 51 116-168 38-108 (351)
330 1now_A Beta-hexosaminidase bet 21.8 2.1E+02 0.0073 27.7 7.5 60 113-174 161-246 (507)
331 1j0h_A Neopullulanase; beta-al 21.7 1.7E+02 0.0059 28.9 7.0 60 176-236 179-246 (588)
332 2gjx_A Beta-hexosaminidase alp 21.6 2.2E+02 0.0075 27.6 7.6 50 113-163 155-229 (507)
333 1ps9_A 2,4-dienoyl-COA reducta 21.6 3.3E+02 0.011 27.2 9.3 82 113-194 127-249 (671)
334 2epl_X N-acetyl-beta-D-glucosa 21.6 1.5E+02 0.0052 29.7 6.5 49 116-166 98-161 (627)
335 2kl5_A Uncharacterized protein 21.3 17 0.00058 27.2 -0.4 21 84-104 77-97 (110)
336 3ndo_A Deoxyribose-phosphate a 21.3 3.9E+02 0.013 22.9 12.7 127 115-258 24-162 (231)
337 2dh2_A 4F2 cell-surface antige 21.2 1.4E+02 0.0049 28.0 6.1 27 212-240 122-148 (424)
338 1chr_A Chloromuconate cycloiso 21.1 4.3E+02 0.015 24.1 9.3 96 117-232 199-296 (370)
339 3qc0_A Sugar isomerase; TIM ba 21.1 2.7E+02 0.0093 23.6 7.6 77 118-197 81-179 (275)
340 3gka_A N-ethylmaleimide reduct 21.1 1.4E+02 0.0049 27.5 5.9 34 134-168 229-269 (361)
341 3vnd_A TSA, tryptophan synthas 20.9 4.2E+02 0.014 23.1 12.3 150 117-289 29-204 (267)
342 1wzl_A Alpha-amylase II; pullu 20.9 1.8E+02 0.0062 28.6 7.0 58 177-235 177-242 (585)
343 3dg3_A Muconate cycloisomerase 20.7 3.7E+02 0.013 24.5 8.8 134 118-258 139-289 (367)
344 3q45_A Mandelate racemase/muco 20.7 4.8E+02 0.017 23.7 9.8 99 117-233 195-293 (368)
345 2qde_A Mandelate racemase/muco 20.5 5E+02 0.017 23.9 9.9 97 117-233 200-298 (397)
346 3ln3_A Dihydrodiol dehydrogena 20.5 3.7E+02 0.013 23.9 8.6 125 117-249 30-179 (324)
347 1jak_A Beta-N-acetylhexosamini 20.4 2.3E+02 0.008 27.5 7.4 59 114-174 168-257 (512)
348 1nu5_A Chloromuconate cycloiso 20.2 4.9E+02 0.017 23.6 11.1 136 118-258 142-293 (370)
349 3i65_A Dihydroorotate dehydrog 20.2 2.3E+02 0.008 26.7 7.2 78 114-192 277-373 (415)
350 1icp_A OPR1, 12-oxophytodienoa 20.1 3.4E+02 0.012 25.0 8.3 82 114-195 154-278 (376)
351 4ab4_A Xenobiotic reductase B; 20.1 1.6E+02 0.0053 27.3 5.9 35 134-169 221-262 (362)
352 2fli_A Ribulose-phosphate 3-ep 20.1 3.7E+02 0.013 22.1 10.1 76 118-196 14-94 (220)
No 1
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=100.00 E-value=1.2e-51 Score=395.89 Aligned_cols=325 Identities=35% Similarity=0.613 Sum_probs=272.9
Q ss_pred hhhhhcCCCccEEEEEcCcccCCCCCCCCCCC----CCCCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEECCCccchhhH
Q 015786 75 MLIDSFGRMHTYLRISLTERCNLRCHYCMPPE----GVDLTPKPQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDI 150 (400)
Q Consensus 75 ~~~~~~~~~~~~l~i~iT~~CNl~C~yC~~~~----~~~~~~~~~~~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l 150 (400)
.+.|.||+.+.++.|.+|.+||++|.||+... +.........|+.+++.++++.+.+.|+..|.|+|||||+++++
T Consensus 4 ~l~d~~gr~~~~l~i~~T~~CNl~C~yC~~~~~~~~~~~~~~~~~~ls~e~i~~~i~~~~~~g~~~i~~tGGEPll~~~l 83 (340)
T 1tv8_A 4 QIKDKLGRPIRDLRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRDL 83 (340)
T ss_dssp CCBCTTSCBCCEEEEECCSCCSCCCTTTSCTTTSSTTCCCCCGGGSCCHHHHHHHHHHHHHTTCCEEEEESSCGGGSTTH
T ss_pred cCcCCCCCccCeEEEEeCCCcCCcCCCCCcCcccCCCcccCCccCCCCHHHHHHHHHHHHHCCCCEEEEeCCCccchhhH
Confidence 37899999999999999999999999999865 22222345679999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCeEEEecCCCCHHHHHHhhcCC-CHHHHHHHHHHHHHcCCCcE
Q 015786 151 EEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRK-GHEKVMESINAAIEVGYNPV 229 (400)
Q Consensus 151 ~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~~-~~~~v~~~i~~l~~~g~~~v 229 (400)
.++++++++..++..+.|+|||+++++.+..|.++|++.|+||+||.+++.|+.+++.+ +|++++++|+.+++.|+ ++
T Consensus 84 ~~li~~~~~~~~~~~i~i~TNG~ll~~~~~~L~~~g~~~v~iSld~~~~~~~~~i~~~~~~~~~v~~~i~~l~~~g~-~v 162 (340)
T 1tv8_A 84 DVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGL-NV 162 (340)
T ss_dssp HHHHHHHTTCTTCCEEEEEECSTTHHHHHHHHHHHTCCEEEEECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHHTTC-EE
T ss_pred HHHHHHHHhCCCCCeEEEEeCccchHHHHHHHHHCCCCEEEEecCCCCHHHHHHhhCCCCCHHHHHHHHHHHHHCCC-CE
Confidence 99999999865554789999999998888999999999999999999999999999988 89999999999999999 99
Q ss_pred EEEEEEecCCChhHHHHHHHHHHhCCCeEEEEeeecCCCC-CCcccCCCCHHHHHHHHHHhCCCceeccCCCCCCceeEE
Q 015786 230 KVNCVVMRGFNDDEICDFVELTRDRPINIRFIEFMPFDGN-VWNVKKLVPYAEMLDTVVKKFPGLRRMQDHPTETAKNFK 308 (400)
Q Consensus 230 ~i~~~v~~~~n~~el~~l~~~~~~~gv~~~~~~~~p~~~~-~~~~~~~~~~~e~~~~i~~~~~~l~~~~~~~~~~~~~~~ 308 (400)
.++++++++.|.+++.++++++.++|+++.++.++|+++. .|.....++.+++++.+.+.+................|.
T Consensus 163 ~i~~vv~~g~n~~ei~~~~~~~~~~g~~~~~i~~~p~~~~~~~~~~~~~~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~ 242 (340)
T 1tv8_A 163 KVNVVIQKGINDDQIIPMLEYFKDKHIEIRFIEFMDVGNDNGWDFSKVVTKDEMLTMIEQHFEIDPVEPKYFGEVAKYYR 242 (340)
T ss_dssp EEEEEECTTTTGGGHHHHHHHHHHTTCCEEEEECCCBCSSSSBCCSSCCCHHHHHHHHHHHSCEEEECCSSTTCSSEEEE
T ss_pred EEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEeeEcCCCccchhhcCCCHHHHHHHHHhhCCccccccCCCCCCCeEEE
Confidence 9999999988999999999999999999999999999764 455556788899999999887533321222344566778
Q ss_pred eCCCCceEEEEcCCCcCcCCCCCeEEEccCCeEEeccCCC-CCCCchHHhhcCCCHHHHHHHHHHHHHhchhhhcccccc
Q 015786 309 IDGHHGNVSFITSMTEHFCAGCNRLRLLADGNFKVCLFGP-SEVSLRDPLRQNASDDELREIIGAAVKRKKAAHAGMFDI 387 (400)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~C~~~~~l~I~~dG~v~pC~~~~-~~~~lg~i~~~~~~~~~l~ei~~~a~~~k~~~~~~~~~~ 387 (400)
++++.+.++++.+.+..+|++|+++.|++||+||||.+.. .+++|+++++++..+++|.++|..++.+|+..|...-+-
T Consensus 243 ~~~~~~~~g~i~~~~~~~C~~c~~~~i~~dG~v~pC~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~~k~~~~~~~~~~ 322 (340)
T 1tv8_A 243 HKDNGVQFGLITSVSQSFCSTCTRARLSSDGKFYGCLFATVDGFNVKAFIRSGVTDEELKEQFKALWQIRDDRYSDERTA 322 (340)
T ss_dssp ETTTCCEEEEECTTTSCCGGGCCEEEECTTSCEESSSCCSSCCCCHHHHHHTCCCHHHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred ECCCCeEEEEECCCCCccccCCCcEEECCCccEEeCCCCCCCCcchHHHHhCCCCHHHHHHHHHHHHHhCchhcCccccc
Confidence 8877788999999999999889999999999999999988 999999999999999999999999999999999841110
Q ss_pred c-----cccccccccccC
Q 015786 388 A-----KTANRPMIHIGG 400 (400)
Q Consensus 388 ~-----~~~~~~~~~~~~ 400 (400)
. ....|+|+.|||
T Consensus 323 ~~~~~~~~~~~~m~~igg 340 (340)
T 1tv8_A 323 QTVANRQRKKINMNYIGG 340 (340)
T ss_dssp HHHHHTC-----------
T ss_pred ccccccCCCccccccCCC
Confidence 0 134789999999
No 2
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=99.93 E-value=7.1e-25 Score=199.51 Aligned_cols=172 Identities=20% Similarity=0.334 Sum_probs=141.9
Q ss_pred EEEcCcccCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhC---CCCEEEEECCCccchhh-HHHHHHHhhhcCCC
Q 015786 88 RISLTERCNLRCHYCMPPEGVDLTPKPQLLSLNEILRLAYLFVTS---GVDKIRLTGGEPTVRKD-IEEACFHLSKLKGL 163 (400)
Q Consensus 88 ~i~iT~~CNl~C~yC~~~~~~~~~~~~~~~s~e~i~~ii~~~~~~---g~~~i~~~GGEPll~~~-l~~~i~~~~~~~g~ 163 (400)
.+.+|++||++|.||+....... .....++.+++.+.++.+.+. ++..|.|+||||+++++ +.++++++++. |+
T Consensus 22 ~~i~t~~Cn~~C~~C~~~~~~~~-~~~~~~~~~~i~~~i~~~~~~~~~~~~~i~~~GGEP~l~~~~l~~l~~~~~~~-~~ 99 (245)
T 3c8f_A 22 FITFFQGCLMRCLYCHNRDTWDT-HGGKEVTVEDLMKEVVTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKE-GI 99 (245)
T ss_dssp EEEEESCCSCCCTTCSCGGGCCT-TCSEEECHHHHHHHHGGGHHHHTSTTCEEEEEESCGGGGHHHHHHHHHHHHTT-TC
T ss_pred EEEEeCCCCCCCCCCCCchhccc-ccCccCCHHHHHHHHHHhhhhhcCCCCeEEEECCCcCCCHHHHHHHHHHHHHc-CC
Confidence 34578999999999998643221 234568999999888776553 46899999999999999 58999999985 88
Q ss_pred ceEEEEecCcc--hhhhHHHHHHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCC-
Q 015786 164 KTLAMTTNGLT--LARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFN- 240 (400)
Q Consensus 164 ~~~~i~TNG~l--l~~~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n- 240 (400)
.+.+.|||++ ..+.+..+++. ++.|.||+||.+++.|++++|. ++++++++++.+.+.|+ .+.+++++++|.|
T Consensus 100 -~i~i~Tng~~~~~~~~~~~l~~~-~~~v~isld~~~~~~~~~~~~~-~~~~~~~~i~~l~~~g~-~v~i~~~~~~g~~~ 175 (245)
T 3c8f_A 100 -HTCLDTNGFVRRYDPVIDELLEV-TDLVMLDLKQMNDEIHQNLVGV-SNHRTLEFAKYLANKNV-KVWIRYVVVPGWSD 175 (245)
T ss_dssp -CEEEEECCCCCCCCHHHHHHHHT-CSEEEEECCCSSHHHHHHHHSS-CSHHHHHHHHHHHHHTC-CEEEEEEECTTTTC
T ss_pred -cEEEEeCCCcCcCHHHHHHHHHh-CCEEEEeCCCCCHHHhhhccCC-CHHHHHHHHHHHHhcCC-EEEEEEeecCCCCC
Confidence 7999999988 66778888887 8899999999999999999875 47999999999999999 9999999998754
Q ss_pred -hhHHHHHHHHHHhCCCeEEEEeeecC
Q 015786 241 -DDEICDFVELTRDRPINIRFIEFMPF 266 (400)
Q Consensus 241 -~~el~~l~~~~~~~gv~~~~~~~~p~ 266 (400)
.+++.++++++.++|. +..+.+.|+
T Consensus 176 ~~~~~~~~~~~~~~~~~-~~~~~~~~~ 201 (245)
T 3c8f_A 176 DDDSAHRLGEFTRDMGN-VEKIELLPY 201 (245)
T ss_dssp CHHHHHHHHHHHHHHCC-EEEEEEEEC
T ss_pred CHHHHHHHHHHHHhcCC-CceeEEEec
Confidence 4899999999999885 333444443
No 3
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=99.92 E-value=2.4e-23 Score=199.19 Aligned_cols=201 Identities=13% Similarity=0.182 Sum_probs=152.0
Q ss_pred CccEEEEEcC-cccCCCCCCCCCCCCCCC--CCCCCCCCHHHHHHHHHHHHh--------------------CCCCEEEE
Q 015786 83 MHTYLRISLT-ERCNLRCHYCMPPEGVDL--TPKPQLLSLNEILRLAYLFVT--------------------SGVDKIRL 139 (400)
Q Consensus 83 ~~~~l~i~iT-~~CNl~C~yC~~~~~~~~--~~~~~~~s~e~i~~ii~~~~~--------------------~g~~~i~~ 139 (400)
...++.+.+| ++||++|.||+....... ......++.+++.+.+....+ ..+..|.|
T Consensus 68 ~~~~l~i~~~~~gCnl~C~fC~~~~~~~~~~~~~~~~~~~eei~~~i~~~~~~~~~~~~g~~~v~~~~~~e~~~~~~v~~ 147 (342)
T 2yx0_A 68 SHRCLQMTPVLAWCTHNCIFCWRPMENFLGTELPQPWDDPAFIVEESIKAQRKLLIGYKGNPKVDKKKFEEAWNPTHAAI 147 (342)
T ss_dssp GGGEEEEESCSSCCSBCCTTCCCSSSSCSCSSCCSSCCCHHHHHHHHHHHHHHHHTTCC--CCSCHHHHHHHTSCCEEEE
T ss_pred CCCeEEEEeChhhhhCcCcccCCCCCCCcccccccCcCCHHHHHHHHHHHHHHHhhccCCCcccchhhhhhccCCCEEEE
Confidence 3557888888 799999999998643211 113456788877765543321 12567999
Q ss_pred E-CCCccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcC--CCeEEEecCCCCHHHHHHhhcC---CCHHH
Q 015786 140 T-GGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESG--LTSVNISLDTLVPAKFEFLTRR---KGHEK 213 (400)
Q Consensus 140 ~-GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g--~~~i~iSldg~~~~~~~~ir~~---~~~~~ 213 (400)
+ ||||++++++.++++.+++. |+ .+.+.|||++ ++.+..|.+.| ++.+.||+|+++++.|+.+++. ++|++
T Consensus 148 sggGEPll~~~l~~ll~~~~~~-g~-~i~l~TNG~~-~e~l~~L~~~g~~~~~l~isld~~~~e~~~~i~~~~~~~~~~~ 224 (342)
T 2yx0_A 148 SLSGEPMLYPYMGDLVEEFHKR-GF-TTFIVTNGTI-PERLEEMIKEDKLPTQLYVSITAPDIETYNSVNIPMIPDGWER 224 (342)
T ss_dssp CSSSCGGGSTTHHHHHHHHHHT-TC-EEEEEECSCC-HHHHHHHHHTTCCCSEEEEEECCSSHHHHHHHHCBSSSCHHHH
T ss_pred cCCCcccchhhHHHHHHHHHHC-CC-cEEEEcCCCc-HHHHHHHHhcCCCCCEEEEEccCCCHHHHHHHhCCCcccHHHH
Confidence 7 89999999999999999985 88 8999999998 67788999876 8999999999999999999974 34999
Q ss_pred HHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCCCe-EEEEeeecCCCCC--CcccCCCCHHHHHHHHH
Q 015786 214 VMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPIN-IRFIEFMPFDGNV--WNVKKLVPYAEMLDTVV 287 (400)
Q Consensus 214 v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~-~~~~~~~p~~~~~--~~~~~~~~~~e~~~~i~ 287 (400)
++++|+.+.+.|+ .+.+++++++|.|++++.++++++.+.+++ +.+..|.|.+... +......+.+++.+...
T Consensus 225 ~~~~i~~l~~~g~-~v~i~~~l~~g~n~~~~~~l~~~l~~~~~~~i~l~~~~~~~~~~~~l~~~~~~~~e~~~~~~~ 300 (342)
T 2yx0_A 225 ILRFLELMRDLPT-RTVVRLTLVKGENMHSPEKYAKLILKARPMFVEAKAYMFVGYSRNRLTINNMPSHQDIREFAE 300 (342)
T ss_dssp HHHHHHHHTTCSS-EEEEEEEECTTTTCCCHHHHHHHHHHHCCSEEEEEECC------CCCCGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCC-CEEEEEEEECCccHHHHHHHHHHHHHcCCCEEEEEeeeecCCCcccccccCCCCHHHHHHHHH
Confidence 9999999999999 899999999989999999999999998874 5555666654332 22223445555444433
No 4
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=99.92 E-value=1.3e-23 Score=205.27 Aligned_cols=243 Identities=14% Similarity=0.180 Sum_probs=173.1
Q ss_pred CCCccEEEEEcCcccCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHh-CCCCEEEEECCCccchhh--HHHHHHHh
Q 015786 81 GRMHTYLRISLTERCNLRCHYCMPPEGVDLTPKPQLLSLNEILRLAYLFVT-SGVDKIRLTGGEPTVRKD--IEEACFHL 157 (400)
Q Consensus 81 ~~~~~~l~i~iT~~CNl~C~yC~~~~~~~~~~~~~~~s~e~i~~ii~~~~~-~g~~~i~~~GGEPll~~~--l~~~i~~~ 157 (400)
.+.+..+.|.+|++||++|.||+...... .....++.+++.++++.+.+ .|+..|.|+|||||++++ +.++++.+
T Consensus 111 hryp~~v~l~vT~~Cnl~C~yC~~~~~~~--~~~~~ls~eei~~~i~~i~~~~gi~~V~ltGGEPll~~d~~L~~il~~l 188 (416)
T 2a5h_A 111 HRYPDRVLLLITDMCSMYCRHCTRRRFAG--QSDDSMPMERIDKAIDYIRNTPQVRDVLLSGGDALLVSDETLEYIIAKL 188 (416)
T ss_dssp CCSSSEEEEEEESCCSSCCTTCTTTTTTT--SSSSBCCHHHHHHHHHHHHTCTTCCEEEEEESCTTSSCHHHHHHHHHHH
T ss_pred ccCCCEEEEecCCCccccCcCCCCcccCC--CccCCCCHHHHHHHHHHHHhcCCCcEEEEECCCCCCCCHHHHHHHHHHH
Confidence 34567889999999999999999865321 23356999999999999988 689999999999999998 99999999
Q ss_pred hhcCCCceEEEEecC-----cchh-hhHHHHHHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEE
Q 015786 158 SKLKGLKTLAMTTNG-----LTLA-RKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKV 231 (400)
Q Consensus 158 ~~~~g~~~~~i~TNG-----~ll~-~~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i 231 (400)
++..++..+.+.||| ++++ +.++.|.+. +.+.||+|+.++ +.+. ++++++|+.++++|+ .+.+
T Consensus 189 ~~~~~v~~i~i~Tng~~~~p~~it~e~l~~L~~~--~~v~Isl~~~~~---~ei~-----~~v~~ai~~L~~aGi-~v~i 257 (416)
T 2a5h_A 189 REIPHVEIVRIGSRTPVVLPQRITPELVNMLKKY--HPVWLNTHFNHP---NEIT-----EESTRACQLLADAGV-PLGN 257 (416)
T ss_dssp HTSTTCCEEEEECSHHHHCGGGCCHHHHHHHGGG--CSEEEEECCCSG---GGCC-----HHHHHHHHHHHHTTC-CEEE
T ss_pred HhcCCccEEEEEecccccccccCCHHHHHHHHhc--CcEEEEEecCCH---HHHh-----HHHHHHHHHHHHcCC-EEEE
Confidence 987666678999999 2344 445666665 679999998665 2332 899999999999999 9999
Q ss_pred EEEEecCCChh--HHHHHHHHHHhCCCeEEEEeeecCC-CCCCcccCCCCHHHHHHHHHHhCCCceeccCCCCCCceeEE
Q 015786 232 NCVVMRGFNDD--EICDFVELTRDRPINIRFIEFMPFD-GNVWNVKKLVPYAEMLDTVVKKFPGLRRMQDHPTETAKNFK 308 (400)
Q Consensus 232 ~~~v~~~~n~~--el~~l~~~~~~~gv~~~~~~~~p~~-~~~~~~~~~~~~~e~~~~i~~~~~~l~~~~~~~~~~~~~~~ 308 (400)
++++++|.|++ ++.++++++.+.|+...++.++|.. +..+.. .+..+..+.+......+..+. .+.....
T Consensus 258 ~~vll~GvNd~~e~l~~l~~~l~~lgv~~~~i~~~~~~~g~~~~~---~~~~~~~eil~~l~~~~~G~~----~p~~v~~ 330 (416)
T 2a5h_A 258 QSVLLRGVNDCVHVMKELVNKLVKIRVRPYYIYQCDLSLGLEHFR---TPVSKGIEIIEGLRGHTSGYC----VPTFVVD 330 (416)
T ss_dssp EEECCTTTTCSHHHHHHHHHHHHHTTEEEEEEECCCCBTTCGGGC---CCHHHHHHHHHTTBTTBCGGG----CCEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHcCCceEEEeecCCCCCccccc---CCcccHHHHHHHHHHHCCCCC----CceEEEE
Confidence 99999988865 4999999999999988888888764 433332 334333333333222111111 1122233
Q ss_pred eCCCCceEEEEcCCCcCcC-CCCCe-EEEccCCeEEeccC
Q 015786 309 IDGHHGNVSFITSMTEHFC-AGCNR-LRLLADGNFKVCLF 346 (400)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~C-~~~~~-l~I~~dG~v~pC~~ 346 (400)
.++..|+... ...+.+ .+++. +..++.|+++.|..
T Consensus 331 ~pgg~gk~~~---~p~y~~~~~~~~~~~~~~~g~~~~~~~ 367 (416)
T 2a5h_A 331 APGGGGKTPV---MPNYVISQSHDKVILRNFEGVITTYSE 367 (416)
T ss_dssp ETTTTEEEEC---CCCCEEEEETTEEEEECTTCCEEEEEC
T ss_pred CCCCCCceee---chhheeccCCCEEEEEcCCCCEEEccC
Confidence 4444444432 112223 23333 56899999999965
No 5
>2z2u_A UPF0026 protein MJ0257; metal binding protein; 2.40A {Methanocaldococcus jannaschii}
Probab=99.91 E-value=6.2e-24 Score=200.69 Aligned_cols=198 Identities=19% Similarity=0.307 Sum_probs=137.9
Q ss_pred CccEEEEEcC-cccCCCCCCCCCCCCCCC------CCCCCCCCHHHHHHHHHHHHh---------------------CCC
Q 015786 83 MHTYLRISLT-ERCNLRCHYCMPPEGVDL------TPKPQLLSLNEILRLAYLFVT---------------------SGV 134 (400)
Q Consensus 83 ~~~~l~i~iT-~~CNl~C~yC~~~~~~~~------~~~~~~~s~e~i~~ii~~~~~---------------------~g~ 134 (400)
.+.++.+.+| .+||++|.||+....... ......++.+++.+.+.+..+ ..+
T Consensus 49 ~~~~l~i~~t~~~Cn~~C~fC~~~~~~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~~~~~~~g~~~v~~~~r~~~~~~~ 128 (311)
T 2z2u_A 49 THRCIQCTPSVIWCQQNCIFCWRVLPRDIGIDISQIKEPKWEEPEVVYEKILAMHKRIIMGYAGVLDRVGEKKFKEALEP 128 (311)
T ss_dssp GGGEEEEESCSSCCSCC----------------CCSCCCCCCCHHHHHHHHHHHHHHHHHGGGGGHHHHCHHHHHHHTSC
T ss_pred CCCeEEeccChhHHhCcCcccCCCCCCcccccccccCccccCCHHHHHHHHHHHHHHHhhccCCCcCcchhhhhhhccCC
Confidence 4678999999 799999999996642110 012467888888765443311 125
Q ss_pred CEEEEE-CCCccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCeEEEecCCCCHHHHHHhhcC--CCH
Q 015786 135 DKIRLT-GGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDTLVPAKFEFLTRR--KGH 211 (400)
Q Consensus 135 ~~i~~~-GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~--~~~ 211 (400)
..|.|+ |||||+++++.++++.+++. |+ .+.++|||++ .+.+..| +.+.|.||+|+.+++.|+++++. ++|
T Consensus 129 ~~i~~s~gGEPll~~~l~~li~~~~~~-g~-~~~l~TNG~~-~~~l~~L---~~~~v~isld~~~~~~~~~i~~~~~~~~ 202 (311)
T 2z2u_A 129 KHVAISLSGEPTLYPYLDELIKIFHKN-GF-TTFVVSNGIL-TDVIEKI---EPTQLYISLDAYDLDSYRRICGGKKEYW 202 (311)
T ss_dssp CEEEECSSSCGGGSTTHHHHHHHHHHT-TC-EEEEEECSCC-HHHHHHC---CCSEEEEECCCSSTTTC----CCCHHHH
T ss_pred CEEEEeCCcCccchhhHHHHHHHHHHC-CC-cEEEECCCCC-HHHHHhC---CCCEEEEEeecCCHHHHHHHhCCccchH
Confidence 679999 89999999999999999985 88 8999999998 4545544 67899999999999999999987 459
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCCCe-EEEEeeecCCCCCC--cccCCCCHHHHHHHHHH
Q 015786 212 EKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPIN-IRFIEFMPFDGNVW--NVKKLVPYAEMLDTVVK 288 (400)
Q Consensus 212 ~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~-~~~~~~~p~~~~~~--~~~~~~~~~e~~~~i~~ 288 (400)
++++++|+.+.+.| .+.+++++++|.|+ ++.++++++.+.+++ +.+..|+|+++..+ ......+.+++.+.+..
T Consensus 203 ~~v~~~i~~l~~~g--~v~i~~~~~~g~n~-~~~~~~~~~~~~~~~~i~l~~~~p~g~~~~~~~~~~~~~~~e~~~~~~~ 279 (311)
T 2z2u_A 203 ESILNTLDILKEKK--RTCIRTTLIRGYND-DILKFVELYERADVHFIELKSYMHVGYSQKRLKKEDMLQHDEILKLAKM 279 (311)
T ss_dssp HHHHHHHHHHTTSS--SEEEEEEECTTTTC-CGGGTHHHHHHHTCSEEEEEECC------------CCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC--CEEEEEEEECCcch-hHHHHHHHHHHcCCCEEEEEeeEEccccccccccccCCCHHHHHHHHHH
Confidence 99999999999988 78999999998888 999999999998875 56677888765542 22345666666665544
Q ss_pred h
Q 015786 289 K 289 (400)
Q Consensus 289 ~ 289 (400)
.
T Consensus 280 l 280 (311)
T 2z2u_A 280 L 280 (311)
T ss_dssp H
T ss_pred H
Confidence 3
No 6
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=99.90 E-value=5.2e-22 Score=190.39 Aligned_cols=205 Identities=20% Similarity=0.261 Sum_probs=166.8
Q ss_pred hhcCCCcc-EEEEEcCcccCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEECCC-ccch-hhHHHHH
Q 015786 78 DSFGRMHT-YLRISLTERCNLRCHYCMPPEGVDLTPKPQLLSLNEILRLAYLFVTSGVDKIRLTGGE-PTVR-KDIEEAC 154 (400)
Q Consensus 78 ~~~~~~~~-~l~i~iT~~CNl~C~yC~~~~~~~~~~~~~~~s~e~i~~ii~~~~~~g~~~i~~~GGE-Pll~-~~l~~~i 154 (400)
..+|+.+. ...|++|++||++|.||+....... .....++.+++.+.++.+.+.|+..|.|+||| |+++ +.+.+++
T Consensus 45 ~~~g~~v~~~~~i~~t~~C~~~C~fC~~~~~~~~-~~~~~ls~eei~~~i~~~~~~g~~~i~~~gGe~p~~~~~~~~~li 123 (348)
T 3iix_A 45 KYVGDEVHIRAIIEFSNVCRKNCLYCGLRRDNKN-LKRYRMTPEEIVERARLAVQFGAKTIVLQSGEDPYXMPDVISDIV 123 (348)
T ss_dssp HHHCSEEEEEEEEEEECCCSCCCTTCTTCTTCCS-SCCCBCCHHHHHHHHHHHHHTTCSEEEEEESCCGGGTTHHHHHHH
T ss_pred HHcCCEEEEEEEeEecCCcCCcCccCCCCCCCCC-cCceeCCHHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHH
Confidence 34666543 3458899999999999997653221 22335899999999999999999999999999 8888 5689999
Q ss_pred HHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEE
Q 015786 155 FHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCV 234 (400)
Q Consensus 155 ~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~ 234 (400)
+.+++. ++ .+. .|+|.+..+.+..|.++|++.+.+|+++.+++.|+.+++.+++++++++++.+.+.|+ .+.+.++
T Consensus 124 ~~i~~~-~~-~i~-~s~g~l~~e~l~~L~~ag~~~v~i~let~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi-~v~~~~i 199 (348)
T 3iix_A 124 KEIKKM-GV-AVT-LSLGEWPREYYEKWKEAGADRYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKELGY-ETGAGSM 199 (348)
T ss_dssp HHHHTT-SC-EEE-EECCCCCHHHHHHHHHHTCCEEECCCBCSCHHHHHHHSTTSCHHHHHHHHHHHHHTTC-EEEECBE
T ss_pred HHHHhc-Cc-eEE-EecCCCCHHHHHHHHHhCCCEEeeeeeeCCHHHHHHhCCCcCHHHHHHHHHHHHHhCC-eeccceE
Confidence 999986 66 454 3566666788899999999999999999999999999988899999999999999999 7776666
Q ss_pred Eec-CCChhHHHHHHHHHHhCCCe-EEEEeeecCCCCCCcccCCCCHHHHHHHHH
Q 015786 235 VMR-GFNDDEICDFVELTRDRPIN-IRFIEFMPFDGNVWNVKKLVPYAEMLDTVV 287 (400)
Q Consensus 235 v~~-~~n~~el~~l~~~~~~~gv~-~~~~~~~p~~~~~~~~~~~~~~~e~~~~i~ 287 (400)
+.. +.+.+++.++++++.+++++ +.+..+.|..++++......+.+++++.+.
T Consensus 200 ~G~p~et~e~~~~~~~~l~~l~~~~i~i~~~~p~~gt~l~~~~~~~~~e~~~~~a 254 (348)
T 3iix_A 200 VGLPGQTIDDLVDDLLFLKEHDFDMVGIGPFIPHPDTPLANEKKGDFTLTLKMVA 254 (348)
T ss_dssp ESCTTCCHHHHHHHHHHHHHHTCSEECCEECCCCTTSTTTTSCCCCHHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHHHHhcCCCEEeeeeeecCCCCCcccCCCCCHHHHHHHHH
Confidence 643 67889999999999998885 677888998888887766677666655443
No 7
>3rfa_A Ribosomal RNA large subunit methyltransferase N; radical SAM, S-adenosylmethionine, iron sulfur cluster, oxidoreductase; HET: SAM; 2.05A {Escherichia coli} PDB: 3rf9_A*
Probab=99.89 E-value=3.3e-22 Score=192.37 Aligned_cols=183 Identities=20% Similarity=0.344 Sum_probs=145.5
Q ss_pred cEEEEEcCcccCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHh----------CCCCEEEEEC-CCccchhh-HHH
Q 015786 85 TYLRISLTERCNLRCHYCMPPEGVDLTPKPQLLSLNEILRLAYLFVT----------SGVDKIRLTG-GEPTVRKD-IEE 152 (400)
Q Consensus 85 ~~l~i~iT~~CNl~C~yC~~~~~~~~~~~~~~~s~e~i~~ii~~~~~----------~g~~~i~~~G-GEPll~~~-l~~ 152 (400)
..+.|..+.+||++|.||+.+.. ...+.++.++|...+..... .++..|.|+| ||||++++ +.+
T Consensus 115 ~tlcVSsq~GCnl~C~fC~tg~~----g~~r~Lt~eEIv~qv~~~~~~~~~~g~~gg~~i~~Ivf~GgGEPLln~d~v~~ 190 (404)
T 3rfa_A 115 ATLCVSSQVGCALECKFCSTAQQ----GFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVP 190 (404)
T ss_dssp EEEECCCEEECSSCCTTCGGGTT----CEEEECCHHHHHHHHHHHHHHHCCHHHHSSCSCSEEEECSSSCGGGCHHHHHH
T ss_pred ceEEEEeCCCCCCcCCCCCCCCC----CCCCcCCHHHHHHHHHHHHHHhhhcccccCCCccEEEEeCCCCcccCHHHHHH
Confidence 46777778899999999997642 23567999998887665432 2478999995 99999975 799
Q ss_pred HHHHhhhcCCC----ceEEEEecCcchhhhHHHHHHcCCCeEEEecCCCCHHHHHHhhcC---CCHHHHHHHHHHHH-Hc
Q 015786 153 ACFHLSKLKGL----KTLAMTTNGLTLARKLPKLKESGLTSVNISLDTLVPAKFEFLTRR---KGHEKVMESINAAI-EV 224 (400)
Q Consensus 153 ~i~~~~~~~g~----~~~~i~TNG~ll~~~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~---~~~~~v~~~i~~l~-~~ 224 (400)
+++.+++..|+ ..+.|+|||++ +.+.+|.+.....+.|||++++++.|+++.+. ..++.++++++.+. +.
T Consensus 191 ~i~~lk~~~Gl~~s~r~itlsTnG~~--p~i~~L~~~~d~~LaiSLka~d~e~~~~i~pv~~~~~le~vl~ai~~~~~~~ 268 (404)
T 3rfa_A 191 AMEIMLDDFGFGLSKRRVTLSTSGVV--PALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKS 268 (404)
T ss_dssp HHHHHHSTTTTCCCGGGEEEEESCCH--HHHHHHHHHCCCEEEEECCCSSHHHHHHHSGGGGTSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHhhcCcCcCCCceEEECCCcH--HHHHHHHHhhcceEEecccCCCHHHHHHhcCCccCCCHHHHHHHHHHHHHHh
Confidence 99999874466 26899999976 45788887755578899999999999999853 45999999996654 55
Q ss_pred CC--CcEEEEEEEecCCCh--hHHHHHHHHHHhCCCeEEEEeeecCCCCCCcc
Q 015786 225 GY--NPVKVNCVVMRGFND--DEICDFVELTRDRPINIRFIEFMPFDGNVWNV 273 (400)
Q Consensus 225 g~--~~v~i~~~v~~~~n~--~el~~l~~~~~~~gv~~~~~~~~p~~~~~~~~ 273 (400)
|. .++.+++++++|.|+ +++.++++++++.+..+.+++|.|+.+..+..
T Consensus 269 g~~~~~V~ie~vLI~GvNDs~e~~~~La~ll~~l~~~VnLIpynP~~~~~~~~ 321 (404)
T 3rfa_A 269 NANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGR 321 (404)
T ss_dssp TTTTTCEEEEEEEBTTTTCSHHHHHHHHHHTTTSCEEEEEEECCCCTTCCCCB
T ss_pred CCCcccEEEEEEEecCCCCCHHHHHHHHHHHHcCCCcEEEEeccCCCCCCCCC
Confidence 54 279999999999987 47999999999988788888888887655543
No 8
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=99.85 E-value=4.9e-20 Score=176.73 Aligned_cols=209 Identities=18% Similarity=0.218 Sum_probs=164.9
Q ss_pred hhcCCCcc-EEEEEcCcccCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEECCC-ccch---hhHHH
Q 015786 78 DSFGRMHT-YLRISLTERCNLRCHYCMPPEGVDLTPKPQLLSLNEILRLAYLFVTSGVDKIRLTGGE-PTVR---KDIEE 152 (400)
Q Consensus 78 ~~~~~~~~-~l~i~iT~~CNl~C~yC~~~~~~~~~~~~~~~s~e~i~~ii~~~~~~g~~~i~~~GGE-Pll~---~~l~~ 152 (400)
..+|..+. +..|++|++||.+|.||...... ......++.+++.+.++++.+.|+..|.|+||| |+++ .++.+
T Consensus 53 ~~~g~~v~~~~~i~~t~~C~~~C~fC~~~~~~--~~~~~~ls~eei~~~~~~~~~~G~~~i~l~gGe~p~~~~~~~~~~~ 130 (350)
T 3t7v_A 53 HYFGNRVFLNCFIYFSTYCKNQCSFCYYNCRN--EINRYRLTMEEIKETCKTLKGAGFHMVDLTMGEDPYYYEDPNRFVE 130 (350)
T ss_dssp HHHTTEEEEEEEEEEECCCCCCCTTCTTCTTS--CCCCCBCCHHHHHHHHHHHTTSCCSEEEEEECCCHHHHHSTHHHHH
T ss_pred HHCCCEEEEEEeeecCCCcCCCCCcCCCcCcC--CCCceeCCHHHHHHHHHHHHHCCCCEEEEeeCCCCccccCHHHHHH
Confidence 34666543 45688899999999999876543 223334899999999999999999999999999 9875 44788
Q ss_pred HHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEE
Q 015786 153 ACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVN 232 (400)
Q Consensus 153 ~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~ 232 (400)
+++.+++..++ .+.+ +.|.+..+.+..|+++|++.+.+++++.+++.++.+++..+++.++++++.+.+.|+ .+...
T Consensus 131 l~~~ik~~~~i-~i~~-s~g~~~~e~l~~L~~aG~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi-~v~~~ 207 (350)
T 3t7v_A 131 LVQIVKEELGL-PIMI-SPGLMDNATLLKAREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQGY-CVEDG 207 (350)
T ss_dssp HHHHHHHHHCS-CEEE-ECSSCCHHHHHHHHHTTEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTC-EEEEE
T ss_pred HHHHHHhhcCc-eEEE-eCCCCCHHHHHHHHHcCCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCC-eEccc
Confidence 89888865466 5554 456555678899999999999999999999999999988889999999999999999 77777
Q ss_pred EEEecCCChhHHHHHHHHHHhCCCe-EEEEeeecCCCCCCcccCCCC---HHHHHHHHHHhCC
Q 015786 233 CVVMRGFNDDEICDFVELTRDRPIN-IRFIEFMPFDGNVWNVKKLVP---YAEMLDTVVKKFP 291 (400)
Q Consensus 233 ~~v~~~~n~~el~~l~~~~~~~gv~-~~~~~~~p~~~~~~~~~~~~~---~~e~~~~i~~~~~ 291 (400)
+++.-+.+.+++.+.++++.+++++ +.+..|.|..++++......+ ...++...+...+
T Consensus 208 ~i~Glget~e~~~~~l~~l~~l~~~~v~~~~f~p~~gT~l~~~~~~~~~e~l~~ia~~Rl~lp 270 (350)
T 3t7v_A 208 ILTGVGNDIESTILSLRGMSTNDPDMVRVMTFLPQEGTPLEGFRDKSNLSELKIISVLRLMFP 270 (350)
T ss_dssp EEESSSCCHHHHHHHHHHHHHTCCSEEEEEECCCCTTSTTTTCCCCCCCCHHHHHHHHHHHST
T ss_pred eEeecCCCHHHHHHHHHHHHhCCCCEEEecceeeCCCCcCccCCCCChHHHHHHHHHHHHhCC
Confidence 6665567889999999999999885 888899998887776544333 3444444444443
No 9
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=99.84 E-value=4e-19 Score=171.52 Aligned_cols=196 Identities=16% Similarity=0.250 Sum_probs=157.5
Q ss_pred EEEEEc-CcccCCCCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHhCCCCEEEEECC--Cccc--hhhHHHHHHHhhh
Q 015786 86 YLRISL-TERCNLRCHYCMPPEGVDL-TPKPQLLSLNEILRLAYLFVTSGVDKIRLTGG--EPTV--RKDIEEACFHLSK 159 (400)
Q Consensus 86 ~l~i~i-T~~CNl~C~yC~~~~~~~~-~~~~~~~s~e~i~~ii~~~~~~g~~~i~~~GG--EPll--~~~l~~~i~~~~~ 159 (400)
...|++ |++||++|.||........ ......++.+++.+.++.+.+.|+..|.|+|| ||.. ...+.++++.+++
T Consensus 66 ~~~i~i~t~~C~~~C~yC~~~~~~~~~~~~~~~~s~eei~~~~~~~~~~g~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~ 145 (369)
T 1r30_A 66 STLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKA 145 (369)
T ss_dssp EEEEEEECSCBSSCCSSCSCBTTSCTTCCCCCCCCHHHHHHHHHHHHHTTCSEEEEEECCSSCCTTTHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCcccCccCCCCCcCCCCCcccccCCHHHHHHHHHHHHHcCCcEEEEEeCCCCCCcCCHHHHHHHHHHHHH
Confidence 345775 9999999999998753211 12345689999999999998899999999874 4654 3558999999988
Q ss_pred cCCCceEEEEecCcchhhhHHHHHHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCC
Q 015786 160 LKGLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGF 239 (400)
Q Consensus 160 ~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~ 239 (400)
. ++ .+. .|||++..+.++.|+++|++.+.+++++ +++.|+.+++..+++.++++++.+++.|+ .+.+.+++.-+.
T Consensus 146 ~-g~-~i~-~t~G~l~~e~l~~L~~aGvd~v~i~les-~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi-~v~~~~I~Gl~e 220 (369)
T 1r30_A 146 M-GL-EAC-MTLGTLSESQAQRLANAGLDYYNHNLDT-SPEFYGNIITTRTYQERLDTLEKVRDAGI-KVCSGGIVGLGE 220 (369)
T ss_dssp T-TS-EEE-EECSSCCHHHHHHHHHHCCCEEECCCBS-CHHHHHHHCCSSCHHHHHHHHHHHHHHHC-EEECCEEECSSC
T ss_pred c-CC-eEE-EecCCCCHHHHHHHHHCCCCEEeecCcC-CHHHHHHhCCCCCHHHHHHHHHHHHHcCC-eeeeeeEeeCCC
Confidence 5 77 566 4999877788999999999999999999 89999999988889999999999999999 776665554456
Q ss_pred ChhHHHHHHHHHHhCC--C-eEEEEeeecCCCCCCcccCCCCHHHHHHHH
Q 015786 240 NDDEICDFVELTRDRP--I-NIRFIEFMPFDGNVWNVKKLVPYAEMLDTV 286 (400)
Q Consensus 240 n~~el~~l~~~~~~~g--v-~~~~~~~~p~~~~~~~~~~~~~~~e~~~~i 286 (400)
+.+++.++++++.+++ + .+.+..+.|..++++......+.+++++.+
T Consensus 221 t~ed~~~~l~~l~~l~~~~~~i~~~~l~p~~gT~l~~~~~~~~~~~~~~~ 270 (369)
T 1r30_A 221 TVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTI 270 (369)
T ss_dssp CHHHHHHHHHHHHSSSSCCSEEEEEECCCCTTSTTSSCCCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhcCCCCEEEeeeeeecCCCcCCCCCCCCHHHHHHHH
Confidence 7789999999999987 4 577788889888877665566666655544
No 10
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.83 E-value=1.7e-19 Score=156.67 Aligned_cols=132 Identities=14% Similarity=0.226 Sum_probs=112.6
Q ss_pred CEEEEECCCccchhhH-HHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCeEEEecCCCCHHHHHHhhcCCCHHH
Q 015786 135 DKIRLTGGEPTVRKDI-EEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEK 213 (400)
Q Consensus 135 ~~i~~~GGEPll~~~l-~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~ 213 (400)
..|.|+|||||+++++ .++++++++. |+ .+.|+|||++..+.+..|.+. ++.|.||+||++++.|++++|. ++++
T Consensus 5 ~~v~~tGGEPll~~~~~~~l~~~~~~~-g~-~~~l~TNG~l~~~~~~~l~~~-~d~v~isld~~~~~~~~~~~g~-~~~~ 80 (182)
T 3can_A 5 GGVTFCGGEPLLHPEFLIDILKRCGQQ-GI-HRAVDTTLLARKETVDEVMRN-CELLLIDLKSMDSTVHQTFCDV-PNEL 80 (182)
T ss_dssp CCEEECSSTGGGSHHHHHHHHHHHHHT-TC-CEEEECTTCCCHHHHHHHHHT-CSEEEEECCCSCHHHHHHHHSS-CSHH
T ss_pred CEEEEEcccccCCHHHHHHHHHHHHHC-CC-cEEEECCCCCCHHHHHHHHhh-CCEEEEECCCCCHHHHHHHhCC-CHHH
Confidence 4699999999999998 6999999985 88 799999999766778888887 8899999999999999999985 4799
Q ss_pred HHHHHHHHHHcCCCcEEEEEEEecCC--ChhHHHHHHHHHHhC-CC--eEEEEeeecCCCCCC
Q 015786 214 VMESINAAIEVGYNPVKVNCVVMRGF--NDDEICDFVELTRDR-PI--NIRFIEFMPFDGNVW 271 (400)
Q Consensus 214 v~~~i~~l~~~g~~~v~i~~~v~~~~--n~~el~~l~~~~~~~-gv--~~~~~~~~p~~~~~~ 271 (400)
++++|+.+.+.|+ ++.++++++++. |.+++.++++++.++ |+ .+.++.+.|.+...|
T Consensus 81 i~~~i~~l~~~g~-~v~i~~~v~~~~n~n~~~~~~~~~~~~~~~g~~~~~~l~~~~p~g~~~~ 142 (182)
T 3can_A 81 ILKNIRRVAEADF-PYYIRIPLIEGVNADEKNIKLSAEFLASLPRHPEIINLLPYHDIGKGKH 142 (182)
T ss_dssp HHHHHHHHHHTTC-CEEEEEEECBTTTCSHHHHHHHHHHHHHSSSCCSEEEEEECCC------
T ss_pred HHHHHHHHHhCCC-eEEEEEEEECCCCCCHHHHHHHHHHHHhCcCccceEEEecCcccCHHHH
Confidence 9999999999999 999999999975 458999999999998 85 577888888876554
No 11
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=99.78 E-value=2.5e-17 Score=154.62 Aligned_cols=191 Identities=14% Similarity=0.225 Sum_probs=136.3
Q ss_pred cEEEEEcCcccCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEECCCccch-------hhHHHHHHHh
Q 015786 85 TYLRISLTERCNLRCHYCMPPEGVDLTPKPQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVR-------KDIEEACFHL 157 (400)
Q Consensus 85 ~~l~i~iT~~CNl~C~yC~~~~~~~~~~~~~~~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~-------~~l~~~i~~~ 157 (400)
..+.|.++.+||++|.||..+... ......+.+++.+.++.+.+.|++.|.|+|++++.+ +++.++++.+
T Consensus 4 ~~~~v~is~GC~~~C~fC~~~~~~---g~~r~r~~e~i~~ei~~l~~~G~~ei~l~g~~~~~yG~~~~~~~~l~~Ll~~l 80 (304)
T 2qgq_A 4 PYAYVKISDGCDRGCTFCSIPSFK---GSLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPDLLRRL 80 (304)
T ss_dssp SEEEEESBCCC----------------CCCCBCCHHHHHHHHHHHHHTTCCEEEEECTTGGGTTHHHHSSCCHHHHHHHH
T ss_pred EEEEEEECCCCCCcCccCCccccC---CCceeeCHHHHHHHHHHHHHCCCcEEEEEeEcccccCCCCCcHHHHHHHHHHH
Confidence 457899999999999999986532 234568999999999999889999999998877653 4689999999
Q ss_pred hhcCCCceEEE-EecCcchh-hhHHHHHHcC--CCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHH--cCCCcEEE
Q 015786 158 SKLKGLKTLAM-TTNGLTLA-RKLPKLKESG--LTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIE--VGYNPVKV 231 (400)
Q Consensus 158 ~~~~g~~~~~i-~TNG~ll~-~~~~~l~~~g--~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~--~g~~~v~i 231 (400)
++..++..+.+ +||+..++ +.++.|.+.| +..+.+++++.+++.++.+++..+++.++++++.+++ .|+ .+..
T Consensus 81 ~~~~gi~~ir~~~~~p~~l~~e~l~~l~~~g~~~~~l~i~lqs~s~~vl~~m~r~~t~e~~~~~i~~l~~~~~gi-~i~~ 159 (304)
T 2qgq_A 81 NSLNGEFWIRVMYLHPDHLTEEIISAMLELDKVVKYFDVPVQHGSDKILKLMGRTKSSEELKKMLSSIRERFPDA-VLRT 159 (304)
T ss_dssp HTSSSSCEEEECCCCGGGCCHHHHHHHHHCTTBCCEEECCCBCSCHHHHHHTTCCSCHHHHHHHHHHHHHHCTTC-EEEE
T ss_pred HhcCCCcEEEEeeeecccCCHHHHHHHHhCCCCccEEEEecccCCHHHHHHhCCCCCHHHHHHHHHHHHhhCCCC-EEEE
Confidence 88657655655 47887775 4568888888 8899999999999999999888889999999999999 466 5554
Q ss_pred EEEE-ecCCChhHHHHHHHHHHhCCCe-EEEEeeecCCCCCCccc-CCCCH
Q 015786 232 NCVV-MRGFNDDEICDFVELTRDRPIN-IRFIEFMPFDGNVWNVK-KLVPY 279 (400)
Q Consensus 232 ~~~v-~~~~n~~el~~l~~~~~~~gv~-~~~~~~~p~~~~~~~~~-~~~~~ 279 (400)
.+++ .+|.+.+++.++++++.+.+++ +.++.|.|..+++.... ..++.
T Consensus 160 ~~IvG~PgEt~ed~~~t~~~l~~l~~~~v~~~~~~p~pgT~~~~~~~~v~~ 210 (304)
T 2qgq_A 160 SIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSDEEGTVAFNLKEKVDP 210 (304)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECCC-----------CCCH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEEeeCCCCChhHhCcCCCCH
Confidence 5444 3678999999999999999884 77788888877765432 24454
No 12
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=99.64 E-value=4.4e-15 Score=147.02 Aligned_cols=185 Identities=12% Similarity=0.193 Sum_probs=137.9
Q ss_pred cEEEEEcCcccCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhC----CCCEEEEECCCccch--hhHHHHHHHhh
Q 015786 85 TYLRISLTERCNLRCHYCMPPEGVDLTPKPQLLSLNEILRLAYLFVTS----GVDKIRLTGGEPTVR--KDIEEACFHLS 158 (400)
Q Consensus 85 ~~l~i~iT~~CNl~C~yC~~~~~~~~~~~~~~~s~e~i~~ii~~~~~~----g~~~i~~~GGEPll~--~~l~~~i~~~~ 158 (400)
..+.|++. .|+.+|.||.................+.+.+.++.+.+. ++..|.|.||+|++. .++.++++.++
T Consensus 53 ~~lYihIp-fC~~~C~yC~~~~~~~~~~~~~~~~~~~l~~Ei~~~~~~~~~~~i~~i~fgGGtpt~l~~~~l~~ll~~i~ 131 (457)
T 1olt_A 53 LSLYVHIP-FCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLR 131 (457)
T ss_dssp EEEEEEEC-EESSCCTTCCSSCEECSCTHHHHHHHHHHHHHHHHHGGGGTTCCEEEEEEEESCGGGSCHHHHHHHHHHHH
T ss_pred eEEEEEcC-CCCCCCCCCCCceeccCCcchHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCCcccCCHHHHHHHHHHHH
Confidence 34566665 599999999876421100000011234444444444332 367899999999863 45899999988
Q ss_pred hcCC---CceEEEEecCcchh-hhHHHHHHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEE
Q 015786 159 KLKG---LKTLAMTTNGLTLA-RKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCV 234 (400)
Q Consensus 159 ~~~g---~~~~~i~TNG~ll~-~~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~ 234 (400)
+..+ ...+++.||+..++ +.++.|.+.|++.|.+++++.++++.+.+.+..+++.++++++.+++.|+..+.+.++
T Consensus 132 ~~~~~~~~~eitie~~p~~l~~e~l~~L~~~G~~rislGvQS~~~~~l~~i~R~~~~~~~~~ai~~~r~~G~~~v~~dlI 211 (457)
T 1olt_A 132 ENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLI 211 (457)
T ss_dssp HHSCEEEEEEEEEEECSSSCCTHHHHHHHHTTCCEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTTCCSCEEEEE
T ss_pred HhCCCCCCcEEEEEEccCcCCHHHHHHHHHcCCCEEEEeeccCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 7322 12688999998775 5678999999999999999999999999999888999999999999999933877776
Q ss_pred E-ecCCChhHHHHHHHHHHhCCCe-EEEEeeecCCCCC
Q 015786 235 V-MRGFNDDEICDFVELTRDRPIN-IRFIEFMPFDGNV 270 (400)
Q Consensus 235 v-~~~~n~~el~~l~~~~~~~gv~-~~~~~~~p~~~~~ 270 (400)
+ .+|++.+++.+.++++.+++++ +.+..+.+..+..
T Consensus 212 ~GlPget~e~~~~tl~~~~~l~~~~i~~y~l~~~p~t~ 249 (457)
T 1olt_A 212 YGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLPTIF 249 (457)
T ss_dssp ESCTTCCHHHHHHHHHHHHHHCCSEEEEEECCCCTTTS
T ss_pred cCCCCCCHHHHHHHHHHHHhcCcCEEEeecCcCCcCch
Confidence 6 5788999999999999999885 6677777665543
No 13
>4fhd_A Spore photoproduct lyase; partial TIM-barrel, DNA repair, damaged DNA; HET: EEM 0TT; 2.00A {Geobacillus thermodenitrificans} PDB: 4fhc_A* 4fhg_A* 4fhe_A* 4fhf_A*
Probab=98.48 E-value=4.1e-07 Score=85.95 Aligned_cols=159 Identities=14% Similarity=0.197 Sum_probs=102.2
Q ss_pred EEEcCcccCCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHH-HHhCCCC--EEEEEC-CCccchhh-----HHHHHHHh
Q 015786 88 RISLTERCNLRCHYCMPPEGVDLTP-KPQLLSLNEILRLAYL-FVTSGVD--KIRLTG-GEPTVRKD-----IEEACFHL 157 (400)
Q Consensus 88 ~i~iT~~CNl~C~yC~~~~~~~~~~-~~~~~s~e~i~~ii~~-~~~~g~~--~i~~~G-GEPll~~~-----l~~~i~~~ 157 (400)
.+.+..+|.+.|.|||........+ -.-....+++.+-++. +.+.+.. .|.+++ .+|+ ..+ +.++++.+
T Consensus 110 ~ln~y~GC~~~C~YCYl~~~~~~~~~I~v~vN~~eiL~~l~~~l~~~~~~~~~i~~g~~TDpy-p~E~~~~ltr~~le~l 188 (368)
T 4fhd_A 110 AIPLATGCMGHCHYCYLQTTLGSKPYIRVYVNLDDIFAQAQKYINERAPEITRFEAACTSDIV-GIDHLTHSLKKAIEFI 188 (368)
T ss_dssp ECCSEEBCSCCCTTCTHHHHTTTCCSEEEECCHHHHHHHHHHHHHHHTTSCEEEESCSSBCHH-HHHTTTCHHHHHHHHH
T ss_pred eeCCccCCCCCCceEeccccCCCCCeEEEecCHHHHHHHHHHHHhhcCCCceEEEEEcCCCcc-hhhHHHhHHHHHHHHH
Confidence 5778899999999999764322111 1123456666655543 4333333 343333 6886 222 46888888
Q ss_pred hhcCCCceEEEEecCcchhhhHHHHHHcCCCeEEEecCCCCHHHHHHhhcC-CCHHHHHHHHHHHHHcCCCcEEEEE-EE
Q 015786 158 SKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDTLVPAKFEFLTRR-KGHEKVMESINAAIEVGYNPVKVNC-VV 235 (400)
Q Consensus 158 ~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~-~~~~~v~~~i~~l~~~g~~~v~i~~-~v 235 (400)
.+..+. .+.|.|-+.+++ .+..+...+...|.+|+.. ++..+.+-.+ .+.++-+++++.|.++|+ ++.+.+ -+
T Consensus 189 ~~~~~~-~v~i~TKs~lid-~L~~l~~~~~v~V~~Sitt--~~l~r~~EP~aps~~~RL~Ai~~l~~aGi-pv~v~iaPI 263 (368)
T 4fhd_A 189 GATDYG-RLRFVTKYEHVD-HLLDARHNGKTRFRFSINS--RYVINHFEPGTSSFDGRLAAARKVAGAGY-KLGFVVAPI 263 (368)
T ss_dssp HHCSSE-EEEEEESCCCCG-GGTTCCCTTCEEEEEEECC--HHHHHHHCTTSCCHHHHHHHHHHHHHTTC-EEEEEEEEE
T ss_pred HhCCCc-eEEEEeCCcCHH-HHHhcCcCCceEEEEEEcC--HHHHHHcCCCCCCHHHHHHHHHHHHHCCC-eEEEEEeCc
Confidence 886454 689999998774 2333433455578889865 5666666543 459999999999999999 888776 56
Q ss_pred ecCCCh-hHHHHHHHHHH
Q 015786 236 MRGFND-DEICDFVELTR 252 (400)
Q Consensus 236 ~~~~n~-~el~~l~~~~~ 252 (400)
+++.|. ++..++++.+.
T Consensus 264 iP~~~~~e~y~~lle~l~ 281 (368)
T 4fhd_A 264 YRHEGWERGYFELFQELA 281 (368)
T ss_dssp CCCTTHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHH
Confidence 775444 35566665443
No 14
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=97.85 E-value=0.00026 Score=65.54 Aligned_cols=164 Identities=13% Similarity=0.109 Sum_probs=110.4
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEECC-----CccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCe
Q 015786 115 QLLSLNEILRLAYLFVTSGVDKIRLTGG-----EPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTS 189 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g~~~i~~~GG-----EPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~ 189 (400)
..++.++..++++.+.+.|+..|-+.++ +|.+ .+..++++.+++.++. .+.+.+ .-.+.++..++.|++.
T Consensus 22 ~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~-~d~~~~~~~~~~~~~~-~~~~l~---~~~~~i~~a~~ag~~~ 96 (298)
T 2cw6_A 22 NIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQM-GDHTEVLKGIQKFPGI-NYPVLT---PNLKGFEAAVAAGAKE 96 (298)
T ss_dssp SCCCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGG-TTHHHHHHHSCCCTTC-BCCEEC---CSHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHcCcCEEEECCCcCccccccc-CCHHHHHHHHhhCCCC-EEEEEc---CCHHhHHHHHHCCCCE
Confidence 4589999999999999999999988765 6777 4667788887765455 333322 1245678889999999
Q ss_pred EEEecCCCCHHHHHHhhcC--CCHHHHHHHHHHHHHcCCCcEEEEEEEe-------cCCChhHHHHHHHHHHhCCCeEEE
Q 015786 190 VNISLDTLVPAKFEFLTRR--KGHEKVMESINAAIEVGYNPVKVNCVVM-------RGFNDDEICDFVELTRDRPINIRF 260 (400)
Q Consensus 190 i~iSldg~~~~~~~~ir~~--~~~~~v~~~i~~l~~~g~~~v~i~~~v~-------~~~n~~el~~l~~~~~~~gv~~~~ 260 (400)
|.|++...+......++.. ..++.+.+.++.+++.|. .+.+..... + .+.+++.++++.+.+.|++..
T Consensus 97 v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~-~v~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~Ga~~i- 173 (298)
T 2cw6_A 97 VVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANI-SVRGYVSCALGCPYEGK-ISPAKVAEVTKKFYSMGCYEI- 173 (298)
T ss_dssp EEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTC-EEEEEEETTTCBTTTBS-CCHHHHHHHHHHHHHTTCSEE-
T ss_pred EEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC-eEEEEEEEEeeCCcCCC-CCHHHHHHHHHHHHHcCCCEE-
Confidence 9998866432223333332 128899999999999999 776665432 2 477889999999999998642
Q ss_pred EeeecCCCCCCcccCCCCHHHHHHHHHHhCC
Q 015786 261 IEFMPFDGNVWNVKKLVPYAEMLDTVVKKFP 291 (400)
Q Consensus 261 ~~~~p~~~~~~~~~~~~~~~e~~~~i~~~~~ 291 (400)
.+....|. ..+....++++.+.+.++
T Consensus 174 -~l~DT~G~----~~P~~~~~lv~~l~~~~~ 199 (298)
T 2cw6_A 174 -SLGDTIGV----GTPGIMKDMLSAVMQEVP 199 (298)
T ss_dssp -EEEETTSC----CCHHHHHHHHHHHHHHSC
T ss_pred -EecCCCCC----cCHHHHHHHHHHHHHhCC
Confidence 22222121 112224456666666553
No 15
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=97.83 E-value=0.00054 Score=63.28 Aligned_cols=136 Identities=14% Similarity=0.180 Sum_probs=97.7
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC---CC--ccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCC
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG---GE--PTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLT 188 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G---GE--Pll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~ 188 (400)
...++.++..++++.+.+.|+..|.+.+ ++ |.+. +..++++.+++..+. .+.+.+ . ..+.++..++.|++
T Consensus 20 ~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~-~~~e~~~~i~~~~~~-~v~~l~--~-n~~~i~~a~~~G~~ 94 (295)
T 1ydn_A 20 KRFVPTADKIALINRLSDCGYARIEATSFVSPKWVPQLA-DSREVMAGIRRADGV-RYSVLV--P-NMKGYEAAAAAHAD 94 (295)
T ss_dssp SSCCCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGT-THHHHHHHSCCCSSS-EEEEEC--S-SHHHHHHHHHTTCS
T ss_pred CCCcCHHHHHHHHHHHHHcCcCEEEEccCcCcccccccc-CHHHHHHHHHhCCCC-EEEEEe--C-CHHHHHHHHHCCCC
Confidence 3459999999999999999999988876 55 5554 566888888765466 454333 1 14667888899999
Q ss_pred eEEEecCCCCHHHHHHhhcCCC----HHHHHHHHHHHHHcCCCcEEEE--EEE-----ecCCChhHHHHHHHHHHhCCCe
Q 015786 189 SVNISLDTLVPAKFEFLTRRKG----HEKVMESINAAIEVGYNPVKVN--CVV-----MRGFNDDEICDFVELTRDRPIN 257 (400)
Q Consensus 189 ~i~iSldg~~~~~~~~ir~~~~----~~~v~~~i~~l~~~g~~~v~i~--~~v-----~~~~n~~el~~l~~~~~~~gv~ 257 (400)
.|.|++.+ + +.|.+..-..+ ++.+.+.++.+++.|+ .|... +++ .+ .+.+++.++++.+.+.|++
T Consensus 95 ~V~i~~~~-S-~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~-~V~~~l~~~~~~e~~~~-~~~~~~~~~~~~~~~~G~d 170 (295)
T 1ydn_A 95 EIAVFISA-S-EGFSKANINCTIAESIERLSPVIGAAINDGL-AIRGYVSCVVECPYDGP-VTPQAVASVTEQLFSLGCH 170 (295)
T ss_dssp EEEEEEES-C-HHHHHHHTSSCHHHHHHHHHHHHHHHHHTTC-EEEEEEECSSEETTTEE-CCHHHHHHHHHHHHHHTCS
T ss_pred EEEEEEec-C-HHHHHHHcCCCHHHHHHHHHHHHHHHHHcCC-eEEEEEEEEecCCcCCC-CCHHHHHHHHHHHHhcCCC
Confidence 99998877 3 34544322223 6777777899999999 77633 333 23 4778899999999899986
Q ss_pred E
Q 015786 258 I 258 (400)
Q Consensus 258 ~ 258 (400)
.
T Consensus 171 ~ 171 (295)
T 1ydn_A 171 E 171 (295)
T ss_dssp E
T ss_pred E
Confidence 4
No 16
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=96.59 E-value=0.1 Score=47.98 Aligned_cols=138 Identities=15% Similarity=0.128 Sum_probs=92.2
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEECC-----CccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCC
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTGG-----EPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLT 188 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~GG-----EPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~ 188 (400)
...++.++..++++.+.+.|+..|-...+ -|.+ .+..++++.+.+..+. .+.+.. .-.+.++..++.|++
T Consensus 24 ~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~-~d~~~~~~~~~~~~~~-~~~~l~---~~~~~i~~a~~aG~~ 98 (302)
T 2ftp_A 24 KQPIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQM-AGSAEVFAGIRQRPGV-TYAALA---PNLKGFEAALESGVK 98 (302)
T ss_dssp SSCCCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGG-TTHHHHHHHSCCCTTS-EEEEEC---CSHHHHHHHHHTTCC
T ss_pred CCCCCHHHHHHHHHHHHHcCcCEEEECCCcCccccccc-cCHHHHHHHhhhcCCC-EEEEEe---CCHHHHHHHHhCCcC
Confidence 45689999999999999999999888652 3554 3566777777765455 444433 123667888889999
Q ss_pred eEEEecCCCCHHHH-HHhhcC--CCHHHHHHHHHHHHHcCCCcEEEEEEEecC------CChhHHHHHHHHHHhCCCeE
Q 015786 189 SVNISLDTLVPAKF-EFLTRR--KGHEKVMESINAAIEVGYNPVKVNCVVMRG------FNDDEICDFVELTRDRPINI 258 (400)
Q Consensus 189 ~i~iSldg~~~~~~-~~ir~~--~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~------~n~~el~~l~~~~~~~gv~~ 258 (400)
.|.|..-. ++.+. ..++.. ...+.+.+.++.+++.|+ .|.......-+ .+.+++.++++.+.+.|++.
T Consensus 99 ~v~i~~~~-s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~-~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~ 175 (302)
T 2ftp_A 99 EVAVFAAA-SEAFSQRNINCSIKDSLERFVPVLEAARQHQV-RVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYE 175 (302)
T ss_dssp EEEEEEES-CHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTC-EEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSE
T ss_pred EEEEEEec-CHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC-eEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCE
Confidence 99887655 33222 222211 126777778888888898 66554433211 35577888888888999864
No 17
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=96.50 E-value=0.051 Score=52.26 Aligned_cols=138 Identities=18% Similarity=0.224 Sum_probs=94.0
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCeEEE
Q 015786 113 KPQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNI 192 (400)
Q Consensus 113 ~~~~~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~i 192 (400)
....++.++-.++++.+.+.|++.|-. |-|-..|+-.+.++.+.+. +. ...+.+-.....+.++...+.|++.|.|
T Consensus 54 ~~~~~s~eeKl~Ia~~L~~~Gv~~IEv--G~P~asp~d~~~~~~i~~~-~~-~~~v~~~~r~~~~di~~A~~aG~~~V~i 129 (423)
T 3ivs_A 54 ANAFFDTEKKIQIAKALDNFGVDYIEL--TSPVASEQSRQDCEAICKL-GL-KCKILTHIRCHMDDARVAVETGVDGVDV 129 (423)
T ss_dssp TTCCCCHHHHHHHHHHHHHHTCSEEEE--CCTTSCHHHHHHHHHHHTS-CC-SSEEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEE--eecccCHHHHHHHHHHHhc-CC-CCEEEEeeccChhhHHHHHHcCCCEEEE
Confidence 455799999999999999999998877 4588888877777777764 44 2334443222245578888899999998
Q ss_pred ecCCCCHHHHHHhhcCCC----HHHHHHHHHHHHHcCCCcEEEEEEE-ecCCChhHHHHHHHHHHhCCCeE
Q 015786 193 SLDTLVPAKFEFLTRRKG----HEKVMESINAAIEVGYNPVKVNCVV-MRGFNDDEICDFVELTRDRPINI 258 (400)
Q Consensus 193 Sldg~~~~~~~~ir~~~~----~~~v~~~i~~l~~~g~~~v~i~~~v-~~~~n~~el~~l~~~~~~~gv~~ 258 (400)
.+-+. +.|.+..-..+ .+.+.+.++.+++.|. .|.+...- .+ .+.+.+.++++.+.+.|++.
T Consensus 130 ~~s~S--d~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~-~V~~~~eda~r-~d~~~~~~v~~~~~~~Ga~~ 196 (423)
T 3ivs_A 130 VIGTS--QYLRKYSHGKDMTYIIDSATEVINFVKSKGI-EVRFSSEDSFR-SDLVDLLSLYKAVDKIGVNR 196 (423)
T ss_dssp EEEC---------------CHHHHHHHHHHHHHHTTTC-EEEEEEESGGG-SCHHHHHHHHHHHHHHCCSE
T ss_pred Eeecc--HHHHHHHcCCCHHHHHHHHHHHHHHHHHCCC-EEEEEEccCcC-CCHHHHHHHHHHHHHhCCCc
Confidence 87663 23322111112 7888889999999998 77665432 23 46677888888888888753
No 18
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=96.32 E-value=0.095 Score=48.30 Aligned_cols=137 Identities=15% Similarity=0.165 Sum_probs=93.8
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEECC-----CccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCC
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTGG-----EPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLT 188 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~GG-----EPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~ 188 (400)
...++.++..++++.+.+.|+..|-+.++ -|.+ .+..++++.+.+..+. .+...+- -.+.++...+.|++
T Consensus 22 ~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~-~d~~~~~~~~~~~~~~-~~~~l~~---~~~~i~~a~~~g~~ 96 (307)
T 1ydo_A 22 PVWIATEDKITWINQLSRTGLSYIEITSFVHPKWIPAL-RDAIDVAKGIDREKGV-TYAALVP---NQRGLENALEGGIN 96 (307)
T ss_dssp SSCCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGG-TTHHHHHHHSCCCTTC-EEEEECC---SHHHHHHHHHHTCS
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECCCcCccccccc-CCHHHHHHHhhhcCCC-eEEEEeC---CHHhHHHHHhCCcC
Confidence 35689999999999999999999988753 2444 3555677777655455 4443331 13567888889999
Q ss_pred eEEEecCCCCHHHHHHhhcCCC----HHHHHHHHHHHHHcCCCcEEEEEEEecC------CChhHHHHHHHHHHhCCCeE
Q 015786 189 SVNISLDTLVPAKFEFLTRRKG----HEKVMESINAAIEVGYNPVKVNCVVMRG------FNDDEICDFVELTRDRPINI 258 (400)
Q Consensus 189 ~i~iSldg~~~~~~~~ir~~~~----~~~v~~~i~~l~~~g~~~v~i~~~v~~~------~n~~el~~l~~~~~~~gv~~ 258 (400)
.|.|.+.. ++ .|....=+.+ ++.+.+.++.+++.|. .+.......-+ .+.+.+.++++.+.+.|++.
T Consensus 97 ~v~i~~~~-sd-~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~-~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~ 173 (307)
T 1ydo_A 97 EACVFMSA-SE-THNRKNINKSTSESLHILKQVNNDAQKANL-TTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISE 173 (307)
T ss_dssp EEEEEEES-SH-HHHHTTTCSCHHHHHHHHHHHHHHHHHTTC-EEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSC
T ss_pred EEEEEeec-CH-HHHHHHhCCCHHHHHHHHHHHHHHHHHCCC-EEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCE
Confidence 99998765 33 3332222223 6777888899999998 77655443211 35678888998888888863
No 19
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=96.00 E-value=0.087 Score=50.17 Aligned_cols=135 Identities=15% Similarity=0.153 Sum_probs=90.2
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCeEEEe
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNIS 193 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~iS 193 (400)
...++.++..++++.+.+.|+..|-..+ |-..|...+.++.+.+. +. ...+.+-.....+.++...+.|++.|.+.
T Consensus 19 ~~~~~~~~k~~ia~~L~~~Gv~~IE~g~--p~~~~~~~~~~~~i~~~-~~-~~~v~~~~r~~~~di~~a~~~g~~~v~i~ 94 (382)
T 2ztj_A 19 KANFSTQDKVEIAKALDEFGIEYIEVTT--PVASPQSRKDAEVLASL-GL-KAKVVTHIQCRLDAAKVAVETGVQGIDLL 94 (382)
T ss_dssp TCCCCHHHHHHHHHHHHHHTCSEEEECC--TTSCHHHHHHHHHHHTS-CC-SSEEEEEEESCHHHHHHHHHTTCSEEEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCcCEEEEcC--CcCCHHHHHHHHHHHhc-CC-CcEEEEEcccChhhHHHHHHcCCCEEEEE
Confidence 4579999999999999999999988844 77778877888888874 44 23333322112455788888999999988
Q ss_pred cCCCCHHHHHHhhcCCC----HHHHHHHHHHHHHcC--CCcEEEEEEEecCCChhHHHHHHHHHHhCCCe
Q 015786 194 LDTLVPAKFEFLTRRKG----HEKVMESINAAIEVG--YNPVKVNCVVMRGFNDDEICDFVELTRDRPIN 257 (400)
Q Consensus 194 ldg~~~~~~~~ir~~~~----~~~v~~~i~~l~~~g--~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~ 257 (400)
+-.. +.|.. .-+.+ ++.+.+.++.+++.| . .+.+.+.-....+.+.+.++++.+.+. ++
T Consensus 95 ~~~s--~~~~~-~~~~s~~e~l~~~~~~v~~ak~~g~~~-~v~~~~ed~~~~~~~~~~~~~~~~~~~-a~ 159 (382)
T 2ztj_A 95 FGTS--KYLRA-PHGRDIPRIIEEAKEVIAYIREAAPHV-EVRFSAEDTFRSEEQDLLAVYEAVAPY-VD 159 (382)
T ss_dssp ECC-----------CCCHHHHHHHHHHHHHHHHHHCTTS-EEEEEETTTTTSCHHHHHHHHHHHGGG-CS
T ss_pred eccC--HHHHH-HhCCCHHHHHHHHHHHHHHHHHcCCCE-EEEEEEEeCCCCCHHHHHHHHHHHHHh-cC
Confidence 7553 23333 22223 577888888999999 6 555554322224567788888888887 54
No 20
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=95.77 E-value=0.15 Score=47.73 Aligned_cols=165 Identities=19% Similarity=0.165 Sum_probs=97.3
Q ss_pred CCCCCHHHHHHHHH-HHHhCCCCEEEEECCCccchhhHHHHHHHhhh-------cCCCceEEEEecCcchhhhHHHHHHc
Q 015786 114 PQLLSLNEILRLAY-LFVTSGVDKIRLTGGEPTVRKDIEEACFHLSK-------LKGLKTLAMTTNGLTLARKLPKLKES 185 (400)
Q Consensus 114 ~~~~s~e~i~~ii~-~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~-------~~g~~~~~i~TNG~ll~~~~~~l~~~ 185 (400)
...++.++..++++ .+.+.|+..|-+.+ |...++=.+.++.+++ .++. .+...+.+. +.++...+.
T Consensus 35 ~~~~~~~~k~~i~~~~L~~~Gv~~IE~g~--~~~~~~~~~~v~~~~~~~~~~~~~~~~-~i~~l~~~~---~~i~~a~~~ 108 (337)
T 3ble_A 35 GVSFSTSEKLNIAKFLLQKLNVDRVEIAS--ARVSKGELETVQKIMEWAATEQLTERI-EILGFVDGN---KTVDWIKDS 108 (337)
T ss_dssp TCCCCHHHHHHHHHHHHHTTCCSEEEEEE--TTSCTTHHHHHHHHHHHHHHTTCGGGE-EEEEESSTT---HHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHHcCCCEEEEeC--CCCChhHHHHHHHHHhhhhhhccCCCC-eEEEEccch---hhHHHHHHC
Confidence 34599999999999 99999999988754 2223321223333332 1222 233222221 367888889
Q ss_pred CCCeEEEecCCCCHHHHHHhhcC--CCHHHHHHHHHHHHHcCCCcEEEEEEE---ecCCChhHHHHHHHHHHhCCCeEEE
Q 015786 186 GLTSVNISLDTLVPAKFEFLTRR--KGHEKVMESINAAIEVGYNPVKVNCVV---MRGFNDDEICDFVELTRDRPINIRF 260 (400)
Q Consensus 186 g~~~i~iSldg~~~~~~~~ir~~--~~~~~v~~~i~~l~~~g~~~v~i~~~v---~~~~n~~el~~l~~~~~~~gv~~~~ 260 (400)
|.+.|.|.+...+......++.. ..++.+.+.++.+++.|. .+.+.+.- ....+.+.+.++++.+.+.|++.
T Consensus 109 g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~-- 185 (337)
T 3ble_A 109 GAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGL-KINVYLEDWSNGFRNSPDYVKSLVEHLSKEHIER-- 185 (337)
T ss_dssp TCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTC-EEEEEEETHHHHHHHCHHHHHHHHHHHHTSCCSE--
T ss_pred CCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC-EEEEEEEECCCCCcCCHHHHHHHHHHHHHcCCCE--
Confidence 99999998776322222233321 126788888888889998 77665432 11135677888899899988853
Q ss_pred EeeecCCCCCCcccCCCCHHHHHHHHHHhCC
Q 015786 261 IEFMPFDGNVWNVKKLVPYAEMLDTVVKKFP 291 (400)
Q Consensus 261 ~~~~p~~~~~~~~~~~~~~~e~~~~i~~~~~ 291 (400)
+.+....|.. .+....++++.+.+.++
T Consensus 186 i~l~DT~G~~----~P~~v~~lv~~l~~~~p 212 (337)
T 3ble_A 186 IFLPDTLGVL----SPEETFQGVDSLIQKYP 212 (337)
T ss_dssp EEEECTTCCC----CHHHHHHHHHHHHHHCT
T ss_pred EEEecCCCCc----CHHHHHHHHHHHHHhcC
Confidence 3332222211 12224456666666653
No 21
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=95.37 E-value=0.48 Score=43.25 Aligned_cols=168 Identities=13% Similarity=0.088 Sum_probs=97.6
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhh-cCCCceEEEEecCc--chhhhHHHHHHcCCCe
Q 015786 113 KPQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSK-LKGLKTLAMTTNGL--TLARKLPKLKESGLTS 189 (400)
Q Consensus 113 ~~~~~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~-~~g~~~~~i~TNG~--ll~~~~~~l~~~g~~~ 189 (400)
....++.++..++++.+.+.|+..|-... |-..|+=.+.++.+.+ ..+. .+...+-+. -++..++.+...|.+.
T Consensus 20 ~~~~~~~~~K~~i~~~L~~~Gv~~IE~g~--p~~~~~d~e~v~~i~~~~~~~-~i~~l~~~~~~di~~a~~~~~~ag~~~ 96 (293)
T 3ewb_X 20 PGVNFDVKEKIQIALQLEKLGIDVIEAGF--PISSPGDFECVKAIAKAIKHC-SVTGLARCVEGDIDRAEEALKDAVSPQ 96 (293)
T ss_dssp ---CCCHHHHHHHHHHHHHHTCSEEEEEC--GGGCHHHHHHHHHHHHHCCSS-EEEEEEESSHHHHHHHHHHHTTCSSEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEEeC--CCCCccHHHHHHHHHHhcCCC-EEEEEecCCHHHHHHHHHHHhhcCCCE
Confidence 35679999999999999999999988765 6666542233444443 2344 343333221 1222334444568888
Q ss_pred EEEecCCCCHHHHHHhhcCCC----HHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCCCeEEEEeeec
Q 015786 190 VNISLDTLVPAKFEFLTRRKG----HEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINIRFIEFMP 265 (400)
Q Consensus 190 i~iSldg~~~~~~~~ir~~~~----~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~~~~~~~~p 265 (400)
|.+.+-.. + .|.+..-+.+ ++.+.+.++.+++.|. .+.+.+.-....+.+.+.++++.+.+.|++. +.+..
T Consensus 97 v~i~~~~S-d-~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~-~v~~~~~d~~~~~~~~~~~~~~~~~~~G~~~--i~l~D 171 (293)
T 3ewb_X 97 IHIFLATS-D-VHMEYKLKMSRAEVLASIKHHISYARQKFD-VVQFSPEDATRSDRAFLIEAVQTAIDAGATV--INIPD 171 (293)
T ss_dssp EEEEEECS-H-HHHHHTTCCCHHHHHHHHHHHHHHHHTTCS-CEEEEEETGGGSCHHHHHHHHHHHHHTTCCE--EEEEC
T ss_pred EEEEecCc-H-HHHHHHhCCCHHHHHHHHHHHHHHHHhCCC-EEEEEeccCCCCCHHHHHHHHHHHHHcCCCE--EEecC
Confidence 88877663 3 3432221223 6667777778888888 7765544222246677889999999998863 33333
Q ss_pred CCCCCCcccCCCCHHHHHHHHHHhCCC
Q 015786 266 FDGNVWNVKKLVPYAEMLDTVVKKFPG 292 (400)
Q Consensus 266 ~~~~~~~~~~~~~~~e~~~~i~~~~~~ 292 (400)
..|. ..+....++++.+.+.++.
T Consensus 172 T~G~----~~P~~v~~lv~~l~~~~~~ 194 (293)
T 3ewb_X 172 TVGY----TNPTEFGQLFQDLRREIKQ 194 (293)
T ss_dssp SSSC----CCHHHHHHHHHHHHHHCTT
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCC
Confidence 2221 0122344666667776653
No 22
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=94.65 E-value=0.41 Score=45.24 Aligned_cols=166 Identities=14% Similarity=0.085 Sum_probs=98.8
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhh-cCCCceEEEEe--cCcchhhhHHHHHHcCCCeE
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSK-LKGLKTLAMTT--NGLTLARKLPKLKESGLTSV 190 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~-~~g~~~~~i~T--NG~ll~~~~~~l~~~g~~~i 190 (400)
...++.++-.++++.+.+.|+..|-.. -|...|.=.+.++.+.+ ..+. .+...+ |-.-++..++.+...|.+.|
T Consensus 28 ~~~~~~~~Kl~ia~~L~~~Gv~~IE~g--~p~~~~~d~e~v~~i~~~~~~~-~i~~l~r~~~~di~~a~~al~~ag~~~v 104 (370)
T 3rmj_A 28 GAAMTKEEKIRVARQLEKLGVDIIEAG--FAAASPGDFEAVNAIAKTITKS-TVCSLSRAIERDIRQAGEAVAPAPKKRI 104 (370)
T ss_dssp TCCCCHHHHHHHHHHHHHHTCSEEEEE--EGGGCHHHHHHHHHHHTTCSSS-EEEEEEESSHHHHHHHHHHHTTSSSEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEEe--CCCCCHHHHHHHHHHHHhCCCC-eEEEEecCCHHHHHHHHHHHhhCCCCEE
Confidence 457999999999999999999987764 37776643344444443 2233 343333 22122233344555888888
Q ss_pred EEecCCCCHHHHHHhhcCCC----HHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCCCeEEEEeeecC
Q 015786 191 NISLDTLVPAKFEFLTRRKG----HEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINIRFIEFMPF 266 (400)
Q Consensus 191 ~iSldg~~~~~~~~ir~~~~----~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~~~~~~~~p~ 266 (400)
.+.+-.. + .|.+..=+.+ ++.+.+.++.+++.|. .+.+.+--....+.+.+.++++.+.+.|++. +.+...
T Consensus 105 ~if~~~S-d-~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~-~v~~~~ed~~r~~~~~~~~~~~~~~~~Ga~~--i~l~DT 179 (370)
T 3rmj_A 105 HTFIATS-P-IHMEYKLKMKPKQVIEAAVKAVKIAREYTD-DVEFSCEDALRSEIDFLAEICGAVIEAGATT--INIPDT 179 (370)
T ss_dssp EEEEECS-H-HHHHHTTCCCHHHHHHHHHHHHHHHTTTCS-CEEEEEETGGGSCHHHHHHHHHHHHHHTCCE--EEEECS
T ss_pred EEEecCc-H-HHHHHHhCCCHHHHHHHHHHHHHHHHHcCC-EEEEecCCCCccCHHHHHHHHHHHHHcCCCE--EEecCc
Confidence 8887763 3 3332211223 6666677778888888 7766654322256678889999998888863 333222
Q ss_pred CCCCCcccCCCCHHHHHHHHHHhCC
Q 015786 267 DGNVWNVKKLVPYAEMLDTVVKKFP 291 (400)
Q Consensus 267 ~~~~~~~~~~~~~~e~~~~i~~~~~ 291 (400)
.|.. .+....++++.+.+.++
T Consensus 180 ~G~~----~P~~~~~lv~~l~~~~~ 200 (370)
T 3rmj_A 180 VGYS----IPYKTEEFFRELIAKTP 200 (370)
T ss_dssp SSCC----CHHHHHHHHHHHHHHST
T ss_pred cCCc----CHHHHHHHHHHHHHhCC
Confidence 2211 12224566667766664
No 23
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=94.18 E-value=0.76 Score=44.70 Aligned_cols=130 Identities=12% Similarity=0.102 Sum_probs=90.9
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEECCCc------cchhhHHHHHHHhhhc-CCCceEEEEecCc---c--------hh
Q 015786 115 QLLSLNEILRLAYLFVTSGVDKIRLTGGEP------TVRKDIEEACFHLSKL-KGLKTLAMTTNGL---T--------LA 176 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g~~~i~~~GGEP------ll~~~l~~~i~~~~~~-~g~~~~~i~TNG~---l--------l~ 176 (400)
..++.++..++++.+.+.|+..|-..||-- +++++-.+.++.+++. ++. .+.+.+.|. - ..
T Consensus 25 ~~~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~~~~~-~l~~l~R~~N~~G~~~~~ddv~~ 103 (464)
T 2nx9_A 25 TRLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQAMPNT-PLQMLLRGQNLLGYRHYADDVVD 103 (464)
T ss_dssp TCCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHHCSSS-CEEEEECGGGTTSSSCCCHHHHH
T ss_pred cCCCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHhCCCC-eEEEEeccccccCcccccchhhH
Confidence 358899999999999999999999987653 4556655666666642 344 455556432 1 13
Q ss_pred hhHHHHHHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEE--EecCCChhHHHHHHHHHHhC
Q 015786 177 RKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCV--VMRGFNDDEICDFVELTRDR 254 (400)
Q Consensus 177 ~~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~--v~~~~n~~el~~l~~~~~~~ 254 (400)
..++...+.|++.|.|..-..+ ++.+...++.+++.|. .+...+. .....+.+.+.++++.+.+.
T Consensus 104 ~~v~~a~~~Gvd~i~if~~~sd------------~~ni~~~i~~ak~~G~-~v~~~i~~~~~~~~~~e~~~~~a~~l~~~ 170 (464)
T 2nx9_A 104 TFVERAVKNGMDVFRVFDAMND------------VRNMQQALQAVKKMGA-HAQGTLCYTTSPVHNLQTWVDVAQQLAEL 170 (464)
T ss_dssp HHHHHHHHTTCCEEEECCTTCC------------THHHHHHHHHHHHTTC-EEEEEEECCCCTTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCcCEEEEEEecCH------------HHHHHHHHHHHHHCCC-EEEEEEEeeeCCCCCHHHHHHHHHHHHHC
Confidence 4467778899999888754422 2567788999999998 7654443 23334778888999999999
Q ss_pred CCeE
Q 015786 255 PINI 258 (400)
Q Consensus 255 gv~~ 258 (400)
|++.
T Consensus 171 Gad~ 174 (464)
T 2nx9_A 171 GVDS 174 (464)
T ss_dssp TCSE
T ss_pred CCCE
Confidence 8863
No 24
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=94.01 E-value=0.65 Score=45.98 Aligned_cols=156 Identities=13% Similarity=0.129 Sum_probs=101.4
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEECCCc------cchhhHHHHHHHhhhc-CCCceEEEEe---cC--c------chh
Q 015786 115 QLLSLNEILRLAYLFVTSGVDKIRLTGGEP------TVRKDIEEACFHLSKL-KGLKTLAMTT---NG--L------TLA 176 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g~~~i~~~GGEP------ll~~~l~~~i~~~~~~-~g~~~~~i~T---NG--~------ll~ 176 (400)
..++.++..++++.+.+.|+..|-..||-- +++++-.+.++.+++. ++. .+.+.+ |. + +..
T Consensus 42 ~~~~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~lr~l~~~~~~~-~l~~L~R~~N~~G~~~ypddv~~ 120 (539)
T 1rqb_A 42 TRMAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFLNEDPWERLRTFRKLMPNS-RLQMLLRGQNLLGYRHYNDEVVD 120 (539)
T ss_dssp TCCCGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCTTS-CEEEEECGGGTTSSSCCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCcccccccchhccCCCHHHHHHHHHHhCCCC-EEEEEeccccccCcccCcccccH
Confidence 358999999999999999999999988643 4555555666666542 344 455555 32 2 124
Q ss_pred hhHHHHHHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEE--EEecCCChhHHHHHHHHHHhC
Q 015786 177 RKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNC--VVMRGFNDDEICDFVELTRDR 254 (400)
Q Consensus 177 ~~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~--~v~~~~n~~el~~l~~~~~~~ 254 (400)
..++...+.|++.|.|..... + ++.+...++.+++.|. .+...+ +.....+.+.+.++++.+.+.
T Consensus 121 ~~ve~a~~aGvd~vrIf~s~s-d-----------~~ni~~~i~~ak~~G~-~v~~~i~~~~~~~~~~e~~~~~a~~l~~~ 187 (539)
T 1rqb_A 121 RFVDKSAENGMDVFRVFDAMN-D-----------PRNMAHAMAAVKKAGK-HAQGTICYTISPVHTVEGYVKLAGQLLDM 187 (539)
T ss_dssp HHHHHHHHTTCCEEEECCTTC-C-----------THHHHHHHHHHHHTTC-EEEEEEECCCSTTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCCEEEEEEehh-H-----------HHHHHHHHHHHHHCCC-eEEEEEEeeeCCCCCHHHHHHHHHHHHHc
Confidence 456888889999988875442 2 2567888999999998 664343 333335778888899989999
Q ss_pred CCeEEEEeeecCCCCCCcccCCCCHHHHHHHHHHhC
Q 015786 255 PINIRFIEFMPFDGNVWNVKKLVPYAEMLDTVVKKF 290 (400)
Q Consensus 255 gv~~~~~~~~p~~~~~~~~~~~~~~~e~~~~i~~~~ 290 (400)
|++. +.+....|.. .+....++++.+.+.+
T Consensus 188 Gad~--I~L~DT~G~~----~P~~v~~lv~~l~~~~ 217 (539)
T 1rqb_A 188 GADS--IALKDMAALL----KPQPAYDIIKAIKDTY 217 (539)
T ss_dssp TCSE--EEEEETTCCC----CHHHHHHHHHHHHHHH
T ss_pred CCCE--EEeCCCCCCc----CHHHHHHHHHHHHHhc
Confidence 8863 3333222211 1122445666666655
No 25
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=93.92 E-value=0.99 Score=42.16 Aligned_cols=157 Identities=12% Similarity=0.113 Sum_probs=100.2
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEE-----CC-Cccc---hhhHHHHHHHhhhc-CCCceEEEEe-cCcchhhhHHHH
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLT-----GG-EPTV---RKDIEEACFHLSKL-KGLKTLAMTT-NGLTLARKLPKL 182 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~-----GG-EPll---~~~l~~~i~~~~~~-~g~~~~~i~T-NG~ll~~~~~~l 182 (400)
...++.++..++++.+.+.|+..|-+. +| .|.. ..+-.+.++.+++. ++. .+.+-+ .+....+.++..
T Consensus 24 ~~~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~-~i~~l~~p~~~~~~~i~~a 102 (345)
T 1nvm_A 24 RHQYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHA-QIATLLLPGIGSVHDLKNA 102 (345)
T ss_dssp TTCCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSS-EEEEEECBTTBCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCC-EEEEEecCCcccHHHHHHH
Confidence 456999999999999999999999993 33 3221 12345667666543 344 444442 233345678888
Q ss_pred HHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCCCeEEEEe
Q 015786 183 KESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINIRFIE 262 (400)
Q Consensus 183 ~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~~~~~~ 262 (400)
.+.|++.+.|.+.. ++ .+.+.+.++.+++.|+ .+...+.-....+.+.+.++++.+.+.|+.. +.
T Consensus 103 ~~aGvd~v~I~~~~-s~-----------~~~~~~~i~~ak~~G~-~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~--i~ 167 (345)
T 1nvm_A 103 YQAGARVVRVATHC-TE-----------ADVSKQHIEYARNLGM-DTVGFLMMSHMIPAEKLAEQGKLMESYGATC--IY 167 (345)
T ss_dssp HHHTCCEEEEEEET-TC-----------GGGGHHHHHHHHHHTC-EEEEEEESTTSSCHHHHHHHHHHHHHHTCSE--EE
T ss_pred HhCCcCEEEEEEec-cH-----------HHHHHHHHHHHHHCCC-EEEEEEEeCCCCCHHHHHHHHHHHHHCCCCE--EE
Confidence 89999999887432 21 1455677788889998 6665543333356778999999999888763 33
Q ss_pred eecCCCCCCcccCCCCHHHHHHHHHHhC
Q 015786 263 FMPFDGNVWNVKKLVPYAEMLDTVVKKF 290 (400)
Q Consensus 263 ~~p~~~~~~~~~~~~~~~e~~~~i~~~~ 290 (400)
+....|.. .+....++++.+++.+
T Consensus 168 l~DT~G~~----~P~~v~~lv~~l~~~~ 191 (345)
T 1nvm_A 168 MADSGGAM----SMNDIRDRMRAFKAVL 191 (345)
T ss_dssp EECTTCCC----CHHHHHHHHHHHHHHS
T ss_pred ECCCcCcc----CHHHHHHHHHHHHHhc
Confidence 33332321 1223456666666665
No 26
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=92.70 E-value=0.55 Score=43.54 Aligned_cols=166 Identities=14% Similarity=0.096 Sum_probs=97.6
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhc-CCCceEEEEecCc--chhhhHHHHHHcCCCeE
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKL-KGLKTLAMTTNGL--TLARKLPKLKESGLTSV 190 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~-~g~~~~~i~TNG~--ll~~~~~~l~~~g~~~i 190 (400)
...++.++..++++.+.+.|+..|-.. -|...|+=.+.++.+.+. .+. .+...+-+. -++..++.+...|++.|
T Consensus 22 ~~~~~~~~Kl~ia~~L~~~Gv~~IE~g--~p~~~~~d~e~v~~i~~~~~~~-~i~~l~r~~~~~i~~a~~al~~ag~~~v 98 (325)
T 3eeg_A 22 GCQLNTEEKIIVAKALDELGVDVIEAG--FPVSSPGDFNSVVEITKAVTRP-TICALTRAKEADINIAGEALRFAKRSRI 98 (325)
T ss_dssp ---CCTTHHHHHHHHHHHHTCSEEEEE--CTTSCHHHHHHHHHHHHHCCSS-EEEEECCSCHHHHHHHHHHHTTCSSEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEe--CCCCCHhHHHHHHHHHHhCCCC-EEEEeecCCHHHHHHHHHhhcccCCCEE
Confidence 456899999999999999999988774 476666422334444432 344 444433221 12222334444488888
Q ss_pred EEecCCCCHHHHH--Hhhc--CCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCCCeEEEEeeecC
Q 015786 191 NISLDTLVPAKFE--FLTR--RKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINIRFIEFMPF 266 (400)
Q Consensus 191 ~iSldg~~~~~~~--~ir~--~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~~~~~~~~p~ 266 (400)
.+.+-.. + .|. .++. ...++.+.+.++.+++.|. .+.+.+......+.+.+.++++.+.+.|++. +.+...
T Consensus 99 ~i~~s~S-d-~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~-~v~f~~~d~~~~~~~~~~~~~~~~~~~G~~~--i~l~DT 173 (325)
T 3eeg_A 99 HTGIGSS-D-IHIEHKLRSTRENILEMAVAAVKQAKKVVH-EVEFFCEDAGRADQAFLARMVEAVIEAGADV--VNIPDT 173 (325)
T ss_dssp EEEEECS-H-HHHC----CCCTTGGGTTHHHHHHHHTTSS-EEEEEEETGGGSCHHHHHHHHHHHHHHTCSE--EECCBS
T ss_pred EEEeccc-H-HHHHHHhCCCHHHHHHHHHHHHHHHHHCCC-EEEEEccccccchHHHHHHHHHHHHhcCCCE--EEecCc
Confidence 8876663 3 332 2222 2237888899999999998 7766554332246677888888888888863 333222
Q ss_pred CCCCCcccCCCCHHHHHHHHHHhCC
Q 015786 267 DGNVWNVKKLVPYAEMLDTVVKKFP 291 (400)
Q Consensus 267 ~~~~~~~~~~~~~~e~~~~i~~~~~ 291 (400)
.|. ..+....++++.+.+.++
T Consensus 174 ~G~----~~P~~v~~lv~~l~~~~~ 194 (325)
T 3eeg_A 174 TGY----MLPWQYGERIKYLMDNVS 194 (325)
T ss_dssp SSC----CCHHHHHHHHHHHHHHCS
T ss_pred cCC----cCHHHHHHHHHHHHHhCC
Confidence 221 011224566667777665
No 27
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=90.41 E-value=8.7 Score=33.73 Aligned_cols=130 Identities=17% Similarity=0.169 Sum_probs=92.9
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhh--HHHHHHHhhhcCCCceEEEEecCcch---------hhhHHHHHHc
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKD--IEEACFHLSKLKGLKTLAMTTNGLTL---------ARKLPKLKES 185 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~--l~~~i~~~~~~~g~~~~~i~TNG~ll---------~~~~~~l~~~ 185 (400)
|++..+..+++.+.++ +..+.|.+|-..+.|+ +.+.++.+++. ++ .+.|-||++ ++.++...+.
T Consensus 23 lg~~~~~d~Le~~g~y-ID~lKfg~Gt~~l~~~~~l~eki~l~~~~-gV---~v~~GGTl~E~~~~qg~~~~yl~~~k~l 97 (251)
T 1qwg_A 23 LPPKFVEDYLKVCGDY-IDFVKFGWGTSAVIDRDVVKEKINYYKDW-GI---KVYPGGTLFEYAYSKGKFDEFLNECEKL 97 (251)
T ss_dssp CCHHHHHHHHHHHGGG-CSEEEECTTGGGGSCHHHHHHHHHHHHTT-TC---EEEECHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhhh-cceEEecCceeeecCHHHHHHHHHHHHHc-CC---eEECCcHHHHHHHHcCcHHHHHHHHHHc
Confidence 8899999999876654 7899999999999888 89999999986 65 577888754 4556778889
Q ss_pred CCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecC-------CChhHHHHHHHHHHhCCCeE
Q 015786 186 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRG-------FNDDEICDFVELTRDRPINI 258 (400)
Q Consensus 186 g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~-------~n~~el~~l~~~~~~~gv~~ 258 (400)
|++.|-||--+.+ -+.+...+.|+.+.+.|+ .+... +... ...+++.+.++...+.|...
T Consensus 98 Gf~~iEiS~G~i~----------l~~~~~~~~I~~~~~~G~-~v~~E--vG~k~~~~~~~~~~~~~I~~~~~~LeAGA~~ 164 (251)
T 1qwg_A 98 GFEAVEISDGSSD----------ISLEERNNAIKRAKDNGF-MVLTE--VGKKMPDKDKQLTIDDRIKLINFDLDAGADY 164 (251)
T ss_dssp TCCEEEECCSSSC----------CCHHHHHHHHHHHHHTTC-EEEEE--ECCSSHHHHTTCCHHHHHHHHHHHHHHTCSE
T ss_pred CCCEEEECCCccc----------CCHHHHHHHHHHHHHCCC-EEeee--ccccCCcccCCCCHHHHHHHHHHHHHCCCcE
Confidence 9999999944432 125777889999999998 55333 3220 12234555555555668776
Q ss_pred EEEeee
Q 015786 259 RFIEFM 264 (400)
Q Consensus 259 ~~~~~~ 264 (400)
..++-.
T Consensus 165 ViiEar 170 (251)
T 1qwg_A 165 VIIEGR 170 (251)
T ss_dssp EEECCT
T ss_pred EEEeee
Confidence 555543
No 28
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=89.96 E-value=2.7 Score=37.84 Aligned_cols=129 Identities=17% Similarity=0.198 Sum_probs=89.0
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEE----CCCccchhh-HHHHHHHhhhc-CCCceEEEEecCcch---hhhHHHHHH
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLT----GGEPTVRKD-IEEACFHLSKL-KGLKTLAMTTNGLTL---ARKLPKLKE 184 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~----GGEPll~~~-l~~~i~~~~~~-~g~~~~~i~TNG~ll---~~~~~~l~~ 184 (400)
.-.++++++.+-.....+.|..-|.++ .|.|.+.++ +.++++.+++. .++ -+.++|-|... ++.+.-+ +
T Consensus 28 ~lPvTpeEia~~A~~a~~AGAaivHlHvRd~~G~ps~d~~~~~e~~~~IR~~~pd~-ii~~TTg~~~~~~~eeR~~~~-~ 105 (282)
T 2y7e_A 28 NLPITPEEQAKEAKACFEAGARVIHLHIREDDGRPSQRLDRFQEAISAIREVVPEI-IIQISTGGAVGESFDKRLAPL-A 105 (282)
T ss_dssp TCCCSHHHHHHHHHHHHHHTEEEEEECEECTTSCEECCHHHHHHHHHHHHHHCTTS-EEEECSSCSTTCCHHHHHGGG-G
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHHCCCe-EEEeCCCCCCCCCHHHHHHHh-h
Confidence 345899999999888889997777776 388999988 68999999975 467 68998966532 2333333 4
Q ss_pred cCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHh
Q 015786 185 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRD 253 (400)
Q Consensus 185 ~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~ 253 (400)
...+..++++-+.+ +....-..+++.+.+.++.+.+.|+ ...+. + ++..++..+..+.++
T Consensus 106 ~~Pe~asl~~gs~N---f~~~v~~n~~~~~~~~~~~~~e~Gv-~pE~e--~---fd~g~l~~~~~l~~~ 165 (282)
T 2y7e_A 106 LKPEMATLNAGTLN---FGDDIFINHPADIIRLAEAFKQYNV-VPEVE--V---YESGMVDAVARLIKK 165 (282)
T ss_dssp GCCSEEEEECCCEE---ETTEEECCCHHHHHHHHHHHHHTTC-EEEEE--E---CSHHHHHHHHHHHHT
T ss_pred cCCCEEEecccccc---cccccccCCHHHHHHHHHHHHHcCC-eEEEE--E---ECHHHHHHHHHHHHc
Confidence 45667766664432 1111122568999999999999998 55444 3 456677777666655
No 29
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=89.75 E-value=7.1 Score=34.74 Aligned_cols=128 Identities=15% Similarity=0.069 Sum_probs=87.1
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcch---------hhhHHHHHHcCC
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL---------ARKLPKLKESGL 187 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll---------~~~~~~l~~~g~ 187 (400)
|++..+..+++.+.++ +..+.|.+|-..+.|++.+.++.+++. ++ .+.|-||++ ++.++...+.|+
T Consensus 50 lg~~~~~DlLe~ag~y-ID~lKfg~GTs~l~~~l~ekI~l~~~~-gV---~v~~GGTlfE~~l~qg~~~~yl~~~k~lGF 124 (276)
T 1u83_A 50 YPLQFFKDAIAGASDY-IDFVKFGWGTSLLTKDLEEKISTLKEH-DI---TFFFGGTLFEKYVSQKKVNEFHRYCTYFGC 124 (276)
T ss_dssp CCHHHHHHHHHHHGGG-CCEEEECTTGGGGCTTHHHHHHHHHHT-TC---EEEECHHHHHHHHHTTCHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHhhhh-cceEEecCcchhhhHHHHHHHHHHHHc-CC---eEeCCcHHHHHHHHcCcHHHHHHHHHHcCC
Confidence 7899999998876655 789999999999999999999999986 66 577888664 345677788899
Q ss_pred CeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEec-------CCChhHHHHHHHHHHhCCCeEEE
Q 015786 188 TSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMR-------GFNDDEICDFVELTRDRPINIRF 260 (400)
Q Consensus 188 ~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~-------~~n~~el~~l~~~~~~~gv~~~~ 260 (400)
+.|-||--+.+ -+.+...+.|+++++. + .|.. -+.. -...+++.+.++...+.|.....
T Consensus 125 ~~IEISdGti~----------l~~~~~~~lI~~a~~~-f-~Vl~--EvG~K~~~~~~~~~~~~~I~~~~~dLeAGA~~Vi 190 (276)
T 1u83_A 125 EYIEISNGTLP----------MTNKEKAAYIADFSDE-F-LVLS--EVGSKDAELASRQSSEEWLEYIVEDMEAGAEKVI 190 (276)
T ss_dssp SEEEECCSSSC----------CCHHHHHHHHHHHTTT-S-EEEE--ECSCCC------CCSTHHHHHHHHHHHHTEEEEE
T ss_pred CEEEECCCccc----------CCHHHHHHHHHHHHhh-c-EEee--eccccCccccCCCCHHHHHHHHHHHHHCCCcEEE
Confidence 99999944432 1245566667777666 5 3322 2211 01234566666655666776555
Q ss_pred Eee
Q 015786 261 IEF 263 (400)
Q Consensus 261 ~~~ 263 (400)
++-
T Consensus 191 iEa 193 (276)
T 1u83_A 191 TEA 193 (276)
T ss_dssp EC-
T ss_pred Eee
Confidence 443
No 30
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint CENT structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=89.65 E-value=5.2 Score=36.58 Aligned_cols=136 Identities=14% Similarity=0.216 Sum_probs=88.4
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEEC-----CCccchhh-HHHHHHHhhhcCCCceEEEEecCcc-----hhhhHHH
Q 015786 113 KPQLLSLNEILRLAYLFVTSGVDKIRLTG-----GEPTVRKD-IEEACFHLSKLKGLKTLAMTTNGLT-----LARKLPK 181 (400)
Q Consensus 113 ~~~~~s~e~i~~ii~~~~~~g~~~i~~~G-----GEPll~~~-l~~~i~~~~~~~g~~~~~i~TNG~l-----l~~~~~~ 181 (400)
..-.++++++.+-.....+.|-..|.++- |.|.+.++ +.++++.+++..++ -+.++|-|.. .++.+..
T Consensus 25 P~lPvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~y~e~i~~IR~~~d~-iI~~TTgg~~~~~~~~eeR~~~ 103 (314)
T 3lot_A 25 PYLPVTPDQIVEEAVKAAEAGAGMVHIHARDPKDGRPTTDVEVFRYICREIKKQSDV-VINVTTGGGGTLGIPVEERAKV 103 (314)
T ss_dssp TTSCCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHHHCCC-EEEECSSTTGGGTCCHHHHTTH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEEeecCCCCCCcCCCHHHHHHHHHHHHhcCCe-EEEeCCCCcCCCCCCHHHHHHH
Confidence 34568999999998888899987777763 78999887 68999999876666 6888886642 2344444
Q ss_pred HHHcCCCeEEEecCCCC----H--HH---------HHHhh------cCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCC
Q 015786 182 LKESGLTSVNISLDTLV----P--AK---------FEFLT------RRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFN 240 (400)
Q Consensus 182 l~~~g~~~i~iSldg~~----~--~~---------~~~ir------~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n 240 (400)
+.+...+..++++-+.+ + +. ...+. =.++++.+.+.++.+.+.|+ ...+.+ ++
T Consensus 104 ~~~~~Pe~aSln~Gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~~N~~~~i~~~~~~~~e~Gi-~pE~e~-----fd 177 (314)
T 3lot_A 104 VPALKPEIATFNMGSMNFAIHPLLKKYKEFKYDWEPEYLEMTRDIVFRNTFKDLEALSRIFKENDT-KPELEC-----YD 177 (314)
T ss_dssp HHHHCCSEEEEECCCEECBCTTHHHHCCCCSSTHHHHHHHHGGGCEECCCHHHHHHHHHHHHHHTC-EEEEEE-----CS
T ss_pred HHhcCCceeeecCCCcccccccccccccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCC-EEEEEE-----EC
Confidence 44444555555542211 0 00 00111 11358899999999999998 554442 45
Q ss_pred hhHHHHHHHHHHhCCC
Q 015786 241 DDEICDFVELTRDRPI 256 (400)
Q Consensus 241 ~~el~~l~~~~~~~gv 256 (400)
..++..+..+.++ |+
T Consensus 178 ~g~l~~~~~l~~~-Gl 192 (314)
T 3lot_A 178 IGQIYNTAFMFHE-GY 192 (314)
T ss_dssp HHHHHHHHHHHHT-TC
T ss_pred HHHHHHHHHHHHC-CC
Confidence 6677777666554 55
No 31
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=87.97 E-value=4.3 Score=36.59 Aligned_cols=131 Identities=11% Similarity=0.045 Sum_probs=89.0
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC----CCccchhh-HHHHHHHhhhcC-CCceEEEEecCcch--hhhHHHHHHc
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG----GEPTVRKD-IEEACFHLSKLK-GLKTLAMTTNGLTL--ARKLPKLKES 185 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G----GEPll~~~-l~~~i~~~~~~~-g~~~~~i~TNG~ll--~~~~~~l~~~ 185 (400)
.-.++++++.+-.....+.|..-|.++- |.|.+.++ +.++++.+++.. ++ -+.++|-|... .+.+..+ ..
T Consensus 28 ~lPvTpeEia~~A~~~~~AGAaivHlH~Rd~~G~ps~d~~~~~e~~~~IR~~~pd~-ii~~TTgg~~~~~eeR~~~~-~~ 105 (284)
T 3chv_A 28 AVPITVSEQVESTQEAFEAGAAIAHCHVRNDDGTPSSDPDRFARLTEGLHTHCPGM-IVQFSTGGRSGAGQARGGML-PL 105 (284)
T ss_dssp TCCCSHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTC-EEEECCCTTTCCGGGGGTTG-GG
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEeeecCCCCCcCCCHHHHHHHHHHHHHhCCCe-EEEeCCCCCCCCHHHHHHhh-hc
Confidence 4458999999999888899988888873 88999988 689999999753 66 68898866432 3444334 44
Q ss_pred CCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCCC
Q 015786 186 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPI 256 (400)
Q Consensus 186 g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv 256 (400)
..+..++++-+.+- ....-..+++.+.+.++.+.+.|+ ...+. + ++..++..+..+.++ |+
T Consensus 106 ~Pe~aSl~~Gs~Nf---~~~v~~n~~~~~~~~~~~~~e~Gv-~pE~e--~---fd~g~l~~~~~l~~~-Gl 166 (284)
T 3chv_A 106 KPDMASLSVGSNNF---PSRVYENPPDLVDWLAAQMRSYRV-TPEIE--A---FDLSHILRAIDMHGR-GL 166 (284)
T ss_dssp CCSEEEECCSCEEC---SSSEECCCHHHHHHHHHHHHHHTC-EEEEE--E---SSHHHHHHHHHHHHT-TC
T ss_pred CCCEEEecCccccc---CCccccCCHHHHHHHHHHHHHcCC-EEEEE--E---ECHHHHHHHHHHHHc-CC
Confidence 45666655543321 111112458899999999999998 55444 3 456677776655544 55
No 32
>3e02_A Uncharacterized protein DUF849; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia xenovorans LB400}
Probab=87.79 E-value=10 Score=34.66 Aligned_cols=136 Identities=14% Similarity=0.218 Sum_probs=87.9
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEEC-----CCccchhh-HHHHHHHhhhcCCCceEEEEecCcch---hhhHHHHH
Q 015786 113 KPQLLSLNEILRLAYLFVTSGVDKIRLTG-----GEPTVRKD-IEEACFHLSKLKGLKTLAMTTNGLTL---ARKLPKLK 183 (400)
Q Consensus 113 ~~~~~s~e~i~~ii~~~~~~g~~~i~~~G-----GEPll~~~-l~~~i~~~~~~~g~~~~~i~TNG~ll---~~~~~~l~ 183 (400)
..-.++++++.+-.....+.|...|.++- |.|.+.++ +.++++.+++.... -+.++|-|... .+.+..+.
T Consensus 25 P~lPvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d~-iI~~TTgg~~~~~~eerla~~~ 103 (311)
T 3e02_A 25 PYLPITPEEIVKEGVAAAEAGAAMLHLHARDPLNGRPSQDPDLFMRFLPQLKERTDA-ILNITTGGGLGMSLDERLAPAR 103 (311)
T ss_dssp TTSCCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTTHHHHHHHCCC-EEEECSSCSTTCCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCCc-EEEECCCCCCCCCHHHHHHHHH
Confidence 34568999999998888899987788762 88999887 68889988875555 57777766443 35555555
Q ss_pred HcCCCeEEEecCCCC------HHHHHH---------h---hc---CCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChh
Q 015786 184 ESGLTSVNISLDTLV------PAKFEF---------L---TR---RKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDD 242 (400)
Q Consensus 184 ~~g~~~i~iSldg~~------~~~~~~---------i---r~---~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~ 242 (400)
+...+..++++-+.+ .+.|+. + +. ..+++.+.+.++.+.+.|+ ...+. + ++..
T Consensus 104 ~~~Pe~aSln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~d~v~~n~~~~i~~~~~~~~e~Gi-~pE~e--~---fd~g 177 (311)
T 3e02_A 104 AARPEVASMNMGSLNFNISQAAAKFDTFKFDWERPYLAGTRDFILSNTFSQIERGMTELGASGT-RFEFE--C---YDVG 177 (311)
T ss_dssp HHCCSEEEEECSCEECBCGGGGGGCSCCSSTTHHHHHHHGGGCEECCCHHHHHHHHHHHHTTTC-EEEEE--E---CSHH
T ss_pred hcCCCeeeecCCCceeccccchhhccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCC-eEEEE--E---EcHH
Confidence 544555555532221 001110 0 11 2458889999999999998 55444 3 4566
Q ss_pred HHHHHHHHHHhCCC
Q 015786 243 EICDFVELTRDRPI 256 (400)
Q Consensus 243 el~~l~~~~~~~gv 256 (400)
++..+..+.++ |+
T Consensus 178 ~l~~~~~l~~~-Gl 190 (311)
T 3e02_A 178 HLYNLAHFVDR-KL 190 (311)
T ss_dssp HHHHHHHHHHT-TS
T ss_pred HHHHHHHHHHc-CC
Confidence 77776665554 44
No 33
>3e49_A Uncharacterized protein DUF849 with A TIM barrel; structural genomics, joint center for structural genomics; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=87.06 E-value=8.1 Score=35.26 Aligned_cols=136 Identities=12% Similarity=0.183 Sum_probs=88.0
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEEC-----CCccchhh-HHHHHHHhhhcCCCceEEEEecCcch---hhhHHHHH
Q 015786 113 KPQLLSLNEILRLAYLFVTSGVDKIRLTG-----GEPTVRKD-IEEACFHLSKLKGLKTLAMTTNGLTL---ARKLPKLK 183 (400)
Q Consensus 113 ~~~~~s~e~i~~ii~~~~~~g~~~i~~~G-----GEPll~~~-l~~~i~~~~~~~g~~~~~i~TNG~ll---~~~~~~l~ 183 (400)
..-.++++++.+-.....+.|...|.++- |.|.+.++ +.++++.+++.... -+.++|-|... .+.+..+.
T Consensus 25 P~lPvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d~-iI~~TTgg~~~~~~eerla~~~ 103 (311)
T 3e49_A 25 PYLPVTPDEVAQASIGAAEAGAAVIHLHARDPRDGRPTQDPAAFAEFLPRIKSNTDA-VINLTTGGSPHMTVEERLRPAT 103 (311)
T ss_dssp TTSCCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTHHHHHHHHCCC-EEEECSCSCTTSCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCCc-EEEECCCCCCCCCHHHHHHHHH
Confidence 34568999999998888899987788762 88999887 68899999875555 57777766443 34555555
Q ss_pred HcCCCeEEEecCCCC----H--HHHH---------------HhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChh
Q 015786 184 ESGLTSVNISLDTLV----P--AKFE---------------FLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDD 242 (400)
Q Consensus 184 ~~g~~~i~iSldg~~----~--~~~~---------------~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~ 242 (400)
+...+..++++-+.+ + +.|+ ..-=..+++.+.+.++.+.+.|+ ...+. + ++..
T Consensus 104 ~~~Pe~aSln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~~n~~~~i~~~~~~~~e~Gi-~pE~e--~---fd~g 177 (311)
T 3e49_A 104 HYMPELASLNMGSMNFGLYPMLERFKEFAHGWEREHLERSRDLVFKNTFADIEFILKTCGGNGT-RFEFE--C---YDTS 177 (311)
T ss_dssp HHCCSEEEEECSCEECCCGGGGGTCCCCSSHHHHHHHHGGGGCEECCCHHHHHHHHHHHHTTTC-EEEEE--E---CSHH
T ss_pred hcCCCeeeecCCCcccccccchhhccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCC-eeEEE--E---ECHH
Confidence 544555555533311 0 0000 00112358889999999999998 55444 3 4566
Q ss_pred HHHHHHHHHHhCCC
Q 015786 243 EICDFVELTRDRPI 256 (400)
Q Consensus 243 el~~l~~~~~~~gv 256 (400)
++..+..+.++ |+
T Consensus 178 ~l~~~~~l~~~-Gl 190 (311)
T 3e49_A 178 HLYNLAHFVDR-KL 190 (311)
T ss_dssp HHHHHHHHHHT-TC
T ss_pred HHHHHHHHHHc-CC
Confidence 77776665554 54
No 34
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=85.50 E-value=16 Score=32.92 Aligned_cols=122 Identities=16% Similarity=0.162 Sum_probs=61.4
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEC--CCccchhh-HHHHHHHhhhcCC-CceEEEEe-cCcch-hhhHHHHHHcCCCeE
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTG--GEPTVRKD-IEEACFHLSKLKG-LKTLAMTT-NGLTL-ARKLPKLKESGLTSV 190 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~G--GEPll~~~-l~~~i~~~~~~~g-~~~~~i~T-NG~ll-~~~~~~l~~~g~~~i 190 (400)
.+++.+.++++.+.+.|+..|.+.- |- +.|. ..++++.+++... + .+.+.+ |..-+ ......-.++|++.|
T Consensus 152 ~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~--~~P~~~~~lv~~l~~~~~~~-~l~~H~Hn~~Gla~an~l~Ai~aG~~~v 228 (295)
T 1ydn_A 152 VTPQAVASVTEQLFSLGCHEVSLGDTIGR--GTPDTVAAMLDAVLAIAPAH-SLAGHYHDTGGRALDNIRVSLEKGLRVF 228 (295)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEETTSC--CCHHHHHHHHHHHHTTSCGG-GEEEEEBCTTSCHHHHHHHHHHHTCCEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEecCCCCC--cCHHHHHHHHHHHHHhCCCC-eEEEEECCCcchHHHHHHHHHHhCCCEE
Confidence 4567777777777677777766641 21 2233 4555555554322 3 355554 22222 233344445677777
Q ss_pred EEecCCCCHHHHHHhh-cCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHh
Q 015786 191 NISLDTLVPAKFEFLT-RRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRD 253 (400)
Q Consensus 191 ~iSldg~~~~~~~~ir-~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~ 253 (400)
.+|+.|..+--|-.-+ |.-..+.++.+++ ..|+ .. +.+.+.+.++.+++.+
T Consensus 229 d~sv~GlG~cp~a~g~~GN~~~e~lv~~l~---~~g~-~~--------~id~~~l~~~~~~~~~ 280 (295)
T 1ydn_A 229 DASVGGLGGCPFAPGAKGNVDTVAVVEMLH---EMGF-ET--------GLDLDRLRSAGLFTQA 280 (295)
T ss_dssp EEBTTCCSCBTTBTTSCCBCBHHHHHHHHH---HTTC-BC--------CCCHHHHHHHHHHHHH
T ss_pred EeccccCCCCCCCCCCcCChhHHHHHHHHH---hcCC-CC--------CcCHHHHHHHHHHHHH
Confidence 7777775332221111 1112566665544 3455 21 3566666666666554
No 35
>3c6c_A 3-keto-5-aminohexanoate cleavage enzyme; DUF849 family protein, TIM beta/alpha-barrel fold, structura genomics; HET: MSE; 1.72A {Ralstonia eutropha}
Probab=85.37 E-value=9.9 Score=34.73 Aligned_cols=134 Identities=13% Similarity=0.145 Sum_probs=88.9
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEE-----CCCccchhh-HHHHHHHhhhc-CCCceEEEEec------Cc-------
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLT-----GGEPTVRKD-IEEACFHLSKL-KGLKTLAMTTN------GL------- 173 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~-----GGEPll~~~-l~~~i~~~~~~-~g~~~~~i~TN------G~------- 173 (400)
.-.++++++.+-.....+.|..-|.++ .|.|.+.++ +.++++.+++. .++ -+.++|- |.
T Consensus 42 ~lPvTpeEIa~~A~~a~~AGAaivHlHvRd~~~G~ps~d~~~y~e~~~~IR~~~~d~-ii~~TTg~gg~~~g~~~~p~~~ 120 (316)
T 3c6c_A 42 SMPITPAQIADACVEAAKAGASVAHIHVRDPKTGGGSRDPVLFKEVVDRVRSSGTDI-VLNLTCGLGAFLLPDPEDESKA 120 (316)
T ss_dssp TCCCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHTTTCCC-EEEEECCCSEEECEETTEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHHCCCe-EEEeCCCccccccCcccCcccc
Confidence 455899999999888889998888886 378999887 68999999975 567 6889886 33
Q ss_pred -------chhhhHHHHHHcCCCeEEEecCCCCH--HHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHH
Q 015786 174 -------TLARKLPKLKESGLTSVNISLDTLVP--AKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEI 244 (400)
Q Consensus 174 -------ll~~~~~~l~~~g~~~i~iSldg~~~--~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el 244 (400)
..++.+.-+.....+..++++-+.+- ..-+.+ -..+++.+.+.++.+.+.|+ ...+. + ++..++
T Consensus 121 ~~~~~l~~~eeR~~~~~~~~Pe~aSl~~Gs~Nf~~~~~~~v-~~n~~~~i~~~~~~~~e~Gv-~pE~e--~---fd~g~l 193 (316)
T 3c6c_A 121 LPESDVVPVAERVKHLEDCLPEIASLDITTGNQVEGKLEFV-YLNTTRTLRAMARRFQELGI-KPELE--V---FSPGDI 193 (316)
T ss_dssp CTTCEECCHHHHTHHHHHHCCSEEEEECCCEEEEETTEEEE-ECCCHHHHHHHHHHHHHHTC-EEEEE--E---SSHHHH
T ss_pred ccccccCCHHHHHHHHHhcCCCeEEeccccccccCCCCcee-ecCCHHHHHHHHHHHHHcCC-eEEEE--E---ECHHHH
Confidence 12333444434346666665544321 100111 12568899999999999998 55444 3 456677
Q ss_pred HHHHHHHHhCCC
Q 015786 245 CDFVELTRDRPI 256 (400)
Q Consensus 245 ~~l~~~~~~~gv 256 (400)
..+..+.++ |+
T Consensus 194 ~~~~~l~~~-Gl 204 (316)
T 3c6c_A 194 LFGKQLIEE-GL 204 (316)
T ss_dssp HHHHHHHHT-TC
T ss_pred HHHHHHHHc-CC
Confidence 766665554 44
No 36
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=84.79 E-value=20 Score=32.40 Aligned_cols=123 Identities=12% Similarity=0.035 Sum_probs=80.8
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEEC--CCccchhh-HHHHHHHhhhcC-CCceEEEEe-cCcch-hhhHHHHHHcCCCe
Q 015786 116 LLSLNEILRLAYLFVTSGVDKIRLTG--GEPTVRKD-IEEACFHLSKLK-GLKTLAMTT-NGLTL-ARKLPKLKESGLTS 189 (400)
Q Consensus 116 ~~s~e~i~~ii~~~~~~g~~~i~~~G--GEPll~~~-l~~~i~~~~~~~-g~~~~~i~T-NG~ll-~~~~~~l~~~g~~~ 189 (400)
..+++.+.++++.+.+.|+..|.+.- |- +.|. ..++++.+++.- ++ .+.+.+ |..-+ ......-.++|++.
T Consensus 155 ~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~--~~P~~~~~lv~~l~~~~~~~-~l~~H~Hn~~Gla~An~laAv~aGa~~ 231 (302)
T 2ftp_A 155 DVDPRQVAWVARELQQMGCYEVSLGDTIGV--GTAGATRRLIEAVASEVPRE-RLAGHFHDTYGQALANIYASLLEGIAV 231 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEESSSC--CCHHHHHHHHHHHTTTSCGG-GEEEEEBCTTSCHHHHHHHHHHTTCCE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCCC--cCHHHHHHHHHHHHHhCCCC-eEEEEeCCCccHHHHHHHHHHHhCCCE
Confidence 35789999999999999999988852 21 3444 577777777643 34 577776 22223 34455556789999
Q ss_pred EEEecCCCCHHHHHHh-hcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHh
Q 015786 190 VNISLDTLVPAKFEFL-TRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRD 253 (400)
Q Consensus 190 i~iSldg~~~~~~~~i-r~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~ 253 (400)
|..|+.|..+--|..= .|....+.++..++. .|+ .. +.+.+.+.++.+++.+
T Consensus 232 vd~tv~GlG~cp~a~gr~GN~~~E~lv~~l~~---~g~-~~--------~idl~~l~~~~~~~~~ 284 (302)
T 2ftp_A 232 FDSSVAGLGGCPYAKGATGNVASEDVLYLLNG---LEI-HT--------GVDMHALVDAGQRICA 284 (302)
T ss_dssp EEEBGGGCCBCGGGTTCBCBCBHHHHHHHHHH---TTC-BC--------CCCHHHHHHHHHHHHH
T ss_pred EEecccccCCCCCCCCCCCChhHHHHHHHHHh---cCC-CC--------CcCHHHHHHHHHHHHH
Confidence 9999998764333321 122227788777664 566 21 4677888888877765
No 37
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=84.00 E-value=9 Score=34.31 Aligned_cols=128 Identities=13% Similarity=0.106 Sum_probs=85.5
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEEC----CCccchhh-HHHHHHHhhhcC-CCceEEEEecCcch--hhhHHHHHH
Q 015786 113 KPQLLSLNEILRLAYLFVTSGVDKIRLTG----GEPTVRKD-IEEACFHLSKLK-GLKTLAMTTNGLTL--ARKLPKLKE 184 (400)
Q Consensus 113 ~~~~~s~e~i~~ii~~~~~~g~~~i~~~G----GEPll~~~-l~~~i~~~~~~~-g~~~~~i~TNG~ll--~~~~~~l~~ 184 (400)
..-.++++++.+-.....+.|...|.++- |.|.+.++ +.++++.+++.. ++ -+.++|-|..- ++. ..+.+
T Consensus 23 P~lPvTpeEia~~A~~~~~AGAaivHlHvRd~~G~~s~d~~~~~e~~~~IR~~~pd~-ii~~Ttg~~~~~~e~R-~~~~~ 100 (275)
T 3no5_A 23 PAVPITVSEQVESTQAAFEAGATLVHLHVRNDDETPTSNPDRFALVLEGIRKHAPGM-ITQVSTGGRSGAGNER-GAMLS 100 (275)
T ss_dssp TTSCCSHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTC-EEEECCCCCTTCCGGG-GTTGG
T ss_pred CCCCCCHHHHHHHHHHHHHccCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHhCCCe-EEEeCCCCCCCCHHHH-hhHhh
Confidence 34568999999999888899988888863 89999987 689999998753 56 67887765321 222 22233
Q ss_pred cCCCeEEEecCCCC--HHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHh
Q 015786 185 SGLTSVNISLDTLV--PAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRD 253 (400)
Q Consensus 185 ~g~~~i~iSldg~~--~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~ 253 (400)
...+..++++-+.+ +..| .++++.+.+.++.+.+.|+ ...+. + ++..++..+..+.++
T Consensus 101 ~~Pe~aSl~~gs~Nf~~~v~-----~N~~~~~~~~~~~~~e~Gi-~pE~e--~---fd~g~l~~~~~l~~~ 160 (275)
T 3no5_A 101 LRPDMASLATGSVNFPTRVY-----DNPPELVDWLAAEMKTYGI-KPEVE--A---FDLSMIFQAAAMQAA 160 (275)
T ss_dssp GCCSEEEEECSCEECSSSEE-----CCCHHHHHHHHHHHHHTTC-EEEEE--E---SSTHHHHHHHHHHHH
T ss_pred cCCCEEEecCcccccccccc-----cCCHHHHHHHHHHHHHcCC-eeEEE--E---EcHHHHHHHHHHHHC
Confidence 34555665544322 1121 2458889999999999998 55444 3 355667766666655
No 38
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=82.46 E-value=13 Score=34.13 Aligned_cols=106 Identities=12% Similarity=0.114 Sum_probs=68.6
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEE----CCCccc-hhhH--HHHHHHhhhcCCCceEEEEecCcc-hhhhHHHH---
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLT----GGEPTV-RKDI--EEACFHLSKLKGLKTLAMTTNGLT-LARKLPKL--- 182 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~----GGEPll-~~~l--~~~i~~~~~~~g~~~~~i~TNG~l-l~~~~~~l--- 182 (400)
...++.++..++++.+.+.|+..|-.. ||..+- .+.+ .+.++.+++.++. .+.+-+.|.. ..+.+..+
T Consensus 18 ~~~~~~~~k~~ia~~L~~aGv~~IEvg~~~~p~~~f~~~~~~~~~e~l~~i~~~~~~-~~~~L~r~~~~~~~dv~~~~~a 96 (320)
T 3dxi_A 18 NWDFNSKIVDAYILAMNELPIDYLEVGYRNKPSKEYMGKFGYTPVSVLKHLRNISTK-KIAIMLNEKNTTPEDLNHLLLP 96 (320)
T ss_dssp TTCCCHHHHHHHHHHHHTTTCCEEEEEECCSCCSSCCCHHHHCCHHHHHHHHHHCCS-EEEEEEEGGGCCGGGHHHHHGG
T ss_pred CCcCCHHHHHHHHHHHHHhCCCEEEEecccCCccccccccccChHHHHHHHhhccCC-eEEEEecCCCCChhhHHHHHHh
Confidence 456899999999999999999988877 554211 1111 3444555444566 5555553322 22344444
Q ss_pred HHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEE
Q 015786 183 KESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNC 233 (400)
Q Consensus 183 ~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~ 233 (400)
.+.|++.+.|..+- + ..+...+.++.+++.|. .+.+..
T Consensus 97 ~~~Gvd~~ri~~~~-----~-------nle~~~~~v~~ak~~G~-~v~~~~ 134 (320)
T 3dxi_A 97 IIGLVDMIRIAIDP-----Q-------NIDRAIVLAKAIKTMGF-EVGFNV 134 (320)
T ss_dssp GTTTCSEEEEEECG-----G-------GHHHHHHHHHHHHTTTC-EEEEEE
T ss_pred hhcCCCEEEEEecH-----H-------HHHHHHHHHHHHHHCCC-EEEEEE
Confidence 24688888888422 1 27888999999999998 665544
No 39
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=81.21 E-value=9 Score=35.00 Aligned_cols=108 Identities=19% Similarity=0.252 Sum_probs=69.4
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhcC-CCceEEEEecCcchhh---hHHHHHHc
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKLK-GLKTLAMTTNGLTLAR---KLPKLKES 185 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~~-g~~~~~i~TNG~ll~~---~~~~l~~~ 185 (400)
...++.+.+.+.++.+.+.|+..|.+.| || ++|..+ -.++++.+.+.. .+ .+..-|.+....+ ..+...+.
T Consensus 23 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grv-pViaGvg~~~t~~ai~la~~A~~~ 101 (313)
T 3dz1_A 23 DGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSM-QVIVGVSAPGFAAMRRLARLSMDA 101 (313)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTS-EEEEECCCSSHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCC-cEEEecCCCCHHHHHHHHHHHHHc
Confidence 3569999999999999999999999988 99 666543 455555554432 33 4555554433433 33556678
Q ss_pred CCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-C--CCcEEEEE
Q 015786 186 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-G--YNPVKVNC 233 (400)
Q Consensus 186 g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g--~~~v~i~~ 233 (400)
|.+.+.+.- |- |. .+-+.+.+..+.+.+. + + ++.+.-
T Consensus 102 Gadavlv~~----P~-~~-----~s~~~l~~~f~~va~a~~~~l-PiilYn 141 (313)
T 3dz1_A 102 GAAGVMIAP----PP-SL-----RTDEQITTYFRQATEAIGDDV-PWVLQD 141 (313)
T ss_dssp TCSEEEECC----CT-TC-----CSHHHHHHHHHHHHHHHCTTS-CEEEEE
T ss_pred CCCEEEECC----CC-CC-----CCHHHHHHHHHHHHHhCCCCC-cEEEEe
Confidence 999887742 21 21 2456677777666654 5 6 665553
No 40
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=80.87 E-value=16 Score=32.97 Aligned_cols=79 Identities=16% Similarity=0.180 Sum_probs=39.8
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCCEEEEEC-----CCccch-----hhHHHHHHHhhhcCCCceEEEEecCcchhhhHHH
Q 015786 112 PKPQLLSLNEILRLAYLFVTSGVDKIRLTG-----GEPTVR-----KDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPK 181 (400)
Q Consensus 112 ~~~~~~s~e~i~~ii~~~~~~g~~~i~~~G-----GEPll~-----~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~ 181 (400)
......+.+.+.+.+.++.+.|..-|.+.| |-+-.. ..+..+++.+++. ++ .++|.|-= .+.++.
T Consensus 44 dgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~-~v-piSIDT~~---~~Va~a 118 (294)
T 2dqw_A 44 DGGRYLDPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSL-GV-PVSVDTRK---PEVAEE 118 (294)
T ss_dssp ---------CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTT-CS-CEEEECSC---HHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhC-CC-eEEEECCC---HHHHHH
Confidence 445567788888888888888987777766 312222 2256677777664 66 68888732 233444
Q ss_pred HHHcCCCeEEEecCC
Q 015786 182 LKESGLTSVNISLDT 196 (400)
Q Consensus 182 l~~~g~~~i~iSldg 196 (400)
-+++|.+ +.=|+.|
T Consensus 119 Al~aGa~-iINdVsg 132 (294)
T 2dqw_A 119 ALKLGAH-LLNDVTG 132 (294)
T ss_dssp HHHHTCS-EEECSSC
T ss_pred HHHhCCC-EEEECCC
Confidence 4444553 3334444
No 41
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=80.48 E-value=19 Score=36.74 Aligned_cols=106 Identities=14% Similarity=0.155 Sum_probs=69.9
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEC---C----------------CccchhhHHHHHHHhhhcCCCc-eEEEEecCcc--
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTG---G----------------EPTVRKDIEEACFHLSKLKGLK-TLAMTTNGLT-- 174 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~G---G----------------EPll~~~l~~~i~~~~~~~g~~-~~~i~TNG~l-- 174 (400)
++.+..++.|+.+++.|+..|.+-| | .|.-..++.++++|+++. |+. .+...|+|..
T Consensus 368 ~nte~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sK-GV~iilw~~t~~~~~n 446 (738)
T 2d73_A 368 ANTANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARK-GIKMMMHHETSASVRN 446 (738)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHT-TCEEEEEEECTTBHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhC-CCEEEEEEcCCCchhh
Confidence 7999999999999999999999922 2 122223489999999985 873 3345566621
Q ss_pred ----hhhhHHHHHHcCCCeEEEecCCC---CHHHHHHhhcCCCHHHHHHHHHHHHHcCC
Q 015786 175 ----LARKLPKLKESGLTSVNISLDTL---VPAKFEFLTRRKGHEKVMESINAAIEVGY 226 (400)
Q Consensus 175 ----l~~~~~~l~~~g~~~i~iSldg~---~~~~~~~ir~~~~~~~v~~~i~~l~~~g~ 226 (400)
+++.+..+.+.|+..|.+.+=|. ..+.|+... ..+-..+.++.+.++++
T Consensus 447 ~e~~~d~~f~~~~~~Gv~GVKvdF~g~~~~r~~~h~~Q~---~v~~Y~~i~~~AA~~~L 502 (738)
T 2d73_A 447 YERHMDKAYQFMADNGYNSVKSGYVGNIIPRGEHHYGQW---MNNHYLYAVKKAADYKI 502 (738)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECCSSCBSTTCCTTSHH---HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCCCEEEeCccccCcCCcccccchH---HHHHHHHHHHHHHHcCc
Confidence 23456778889999999988751 122111110 13445556677777755
No 42
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=80.34 E-value=4.9 Score=36.29 Aligned_cols=108 Identities=15% Similarity=0.168 Sum_probs=68.9
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhcCCCceEEEEecCcchhh---hHHHHHHcC
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKLKGLKTLAMTTNGLTLAR---KLPKLKESG 186 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~~g~~~~~i~TNG~ll~~---~~~~l~~~g 186 (400)
...++.+.+.+.++.+.+.|+..|.+.| || |+|..+ -.++++.+.+..+ .+..-+.+....+ ..+...+.|
T Consensus 14 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~--gViaGvg~~~t~~ai~la~~A~~~G 91 (288)
T 2nuw_A 14 QGKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTH--KLIFQVGSLNLNDVMELVKFSNEMD 91 (288)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCS--CEEEECCCSCHHHHHHHHHHHHTSC
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC--CeEEeeCCCCHHHHHHHHHHHHhcC
Confidence 3569999999999999999999999988 99 777654 5677777765422 1333343333333 335556679
Q ss_pred CCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEE
Q 015786 187 LTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 232 (400)
Q Consensus 187 ~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 232 (400)
.+.+.+..-.+. + ..+-+.+.+..+.+.+. ++ ++.+.
T Consensus 92 adavlv~~P~y~-----~---~~s~~~l~~~f~~va~a~~l-PiilY 129 (288)
T 2nuw_A 92 ILGVSSHSPYYF-----P---RLPEKFLAKYYEEIARISSH-SLYIY 129 (288)
T ss_dssp CSEEEECCCCSS-----C---SCCHHHHHHHHHHHHHHCCS-CEEEE
T ss_pred CCEEEEcCCcCC-----C---CCCHHHHHHHHHHHHHhcCC-CEEEE
Confidence 988877643321 1 02345666666665553 56 66554
No 43
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=80.19 E-value=6 Score=35.88 Aligned_cols=109 Identities=14% Similarity=0.155 Sum_probs=67.9
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCceEEEEecCcchhh---hHHHHHH
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKE 184 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~~---~~~~l~~ 184 (400)
...++.+.+.+.++.+.+.|+..|.+.| || ++|..+ -.++++.+.+. ..+ .+..-+.+....+ ..+...+
T Consensus 22 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grv-pviaGvg~~~t~~ai~la~~a~~ 100 (297)
T 3flu_A 22 DGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRV-PVIAGTGANNTVEAIALSQAAEK 100 (297)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSS-CEEEECCCSSHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCC-cEEEeCCCcCHHHHHHHHHHHHH
Confidence 3469999999999999999999999988 99 566543 44455444332 233 4555554433433 3456667
Q ss_pred cCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEEE
Q 015786 185 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVNC 233 (400)
Q Consensus 185 ~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~ 233 (400)
.|.+.+.+..-.+. +.+-+.+.+..+.+.+. ++ ++.+.-
T Consensus 101 ~Gadavlv~~P~y~---------~~~~~~l~~~f~~va~a~~l-PiilYn 140 (297)
T 3flu_A 101 AGADYTLSVVPYYN---------KPSQEGIYQHFKTIAEATSI-PMIIYN 140 (297)
T ss_dssp TTCSEEEEECCCSS---------CCCHHHHHHHHHHHHHHCCS-CEEEEE
T ss_pred cCCCEEEECCCCCC---------CCCHHHHHHHHHHHHHhCCC-CEEEEE
Confidence 89998877643321 12345566666655553 66 665553
No 44
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=80.04 E-value=5.9 Score=36.00 Aligned_cols=108 Identities=19% Similarity=0.255 Sum_probs=68.2
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCceEEEEecCcchhh---hHHHHHH
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKE 184 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~~---~~~~l~~ 184 (400)
...++.+.+.+.++.+.+.|+..|.+.| || ++|..+ -.++++.+.+. ..+ .+..-+.+....+ ..+...+
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grv-pViaGvg~~~t~~ai~la~~A~~ 105 (301)
T 1xky_A 27 NGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRV-PVIAGTGSNNTHASIDLTKKATE 105 (301)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSS-CEEEECCCSCHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCc-eEEeCCCCCCHHHHHHHHHHHHh
Confidence 3568999999999999999999999988 99 466543 34444444322 233 4555554433433 3355567
Q ss_pred cCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEE
Q 015786 185 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 232 (400)
Q Consensus 185 ~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 232 (400)
.|.+.+.+..-.+. +.+-+.+.+..+.+.+. ++ ++.+.
T Consensus 106 ~Gadavlv~~P~y~---------~~s~~~l~~~f~~va~a~~l-PiilY 144 (301)
T 1xky_A 106 VGVDAVMLVAPYYN---------KPSQEGMYQHFKAIAESTPL-PVMLY 144 (301)
T ss_dssp TTCSEEEEECCCSS---------CCCHHHHHHHHHHHHHTCSS-CEEEE
T ss_pred cCCCEEEEcCCCCC---------CCCHHHHHHHHHHHHHhcCC-CEEEE
Confidence 89998877644321 12346666666666664 55 66554
No 45
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=79.88 E-value=53 Score=33.65 Aligned_cols=157 Identities=13% Similarity=0.130 Sum_probs=94.7
Q ss_pred CCCCHHHHHHHHHHHHhC--CCCEEEEECCCc------cchhhHHHHHHHhhh-cCCCceEEEEecC---cc--------
Q 015786 115 QLLSLNEILRLAYLFVTS--GVDKIRLTGGEP------TVRKDIEEACFHLSK-LKGLKTLAMTTNG---LT-------- 174 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~--g~~~i~~~GGEP------ll~~~l~~~i~~~~~-~~g~~~~~i~TNG---~l-------- 174 (400)
..++.++..++++.+.+. |+..|-..||.- ++..+=.+.++.+++ .++. .+.+...| .-
T Consensus 120 ~r~~~edkl~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~e~p~e~l~~l~~~~~~~-~l~~l~R~~n~vgy~~~p~~~ 198 (718)
T 3bg3_A 120 TRVRTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAMRFLYECPWRRLQELRELIPNI-PFQMLLRGANAVGYTNYPDNV 198 (718)
T ss_dssp TCCCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCSSS-CEEEEECGGGTTSSSCCCHHH
T ss_pred cCCCHHHHHHHHHHHHHhcCCCcEEEecCCcchhhccccCCCCHHHHHHHHHHHcccc-hHHHHhcccccccccccCCcc
Confidence 348999999999999987 577798887653 554332223333322 1233 45554533 21
Q ss_pred hhhhHHHHHHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEe-----c---CCChhHHHH
Q 015786 175 LARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVM-----R---GFNDDEICD 246 (400)
Q Consensus 175 l~~~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~-----~---~~n~~el~~ 246 (400)
..+.++...+.|++.|.|.. +.+ ..+.+...++.+++.|. .+......+ + ..+.+.+.+
T Consensus 199 ~~~~i~~a~~~Gvd~irIf~-s~n-----------~l~~l~~~i~~ak~~G~-~v~~~i~~~~d~~dp~r~~~~~e~~~~ 265 (718)
T 3bg3_A 199 VFKFCEVAKENGMDVFRVFD-SLN-----------YLPNMLLGMEAAGSAGG-VVEAAISYTGDVADPSRTKYSLQYYMG 265 (718)
T ss_dssp HHHHHHHHHHHTCCEEEEEC-SSC-----------CHHHHHHHHHHHHTTTS-EEEEEEECCSCTTCTTCCTTCHHHHHH
T ss_pred hHHHHHHHHhcCcCEEEEEe-cHH-----------HHHHHHHHHHHHHHcCC-eEEEEEEeeccccCCCCCCCCHHHHHH
Confidence 23456778889999888874 322 25677788888999987 665544433 1 135677888
Q ss_pred HHHHHHhCCCeEEEEeeecCCCCCCcccCCCCHHHHHHHHHHhCC
Q 015786 247 FVELTRDRPINIRFIEFMPFDGNVWNVKKLVPYAEMLDTVVKKFP 291 (400)
Q Consensus 247 l~~~~~~~gv~~~~~~~~p~~~~~~~~~~~~~~~e~~~~i~~~~~ 291 (400)
+++.+.+.|++. +.+....|.. .+....++++.+++.++
T Consensus 266 ~a~~l~~~Ga~~--I~l~DT~G~~----~P~~v~~lV~~lk~~~p 304 (718)
T 3bg3_A 266 LAEELVRAGTHI--LCIKDMAGLL----KPTACTMLVSSLRDRFP 304 (718)
T ss_dssp HHHHHHHHTCSE--EEEECTTSCC----CHHHHHHHHHHHHHHST
T ss_pred HHHHHHHcCCCE--EEEcCcCCCc----CHHHHHHHHHHHHHhCC
Confidence 888888888863 2222222210 11223466666666663
No 46
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=79.66 E-value=5.7 Score=36.40 Aligned_cols=109 Identities=10% Similarity=0.147 Sum_probs=66.8
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCceEEEEecCcchh---hhHHHHHH
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLA---RKLPKLKE 184 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~---~~~~~l~~ 184 (400)
...++.+.+.+.++.+.+.|+..|.+.| || ++|..+ -.++++.+.+. ..+ .+.+-+.+.... +..+...+
T Consensus 37 dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grv-pViaGvg~~st~~ai~la~~A~~ 115 (315)
T 3si9_A 37 NGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRV-PVVAGAGSNSTSEAVELAKHAEK 115 (315)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSS-CBEEECCCSSHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCC-cEEEeCCCCCHHHHHHHHHHHHh
Confidence 3468999999999999999999999988 99 566543 34444444332 133 444444443343 33456667
Q ss_pred cCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEEE
Q 015786 185 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVNC 233 (400)
Q Consensus 185 ~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~ 233 (400)
.|.+.+.+-.-.+. + .+-+.+.+..+.+.+. ++ ++.+.-
T Consensus 116 ~Gadavlv~~P~y~-----~----~~~~~l~~~f~~va~a~~l-PiilYn 155 (315)
T 3si9_A 116 AGADAVLVVTPYYN-----R----PNQRGLYTHFSSIAKAISI-PIIIYN 155 (315)
T ss_dssp TTCSEEEEECCCSS-----C----CCHHHHHHHHHHHHHHCSS-CEEEEE
T ss_pred cCCCEEEECCCCCC-----C----CCHHHHHHHHHHHHHcCCC-CEEEEe
Confidence 89988777643321 1 2345555555555553 66 665553
No 47
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=79.01 E-value=14 Score=33.60 Aligned_cols=108 Identities=16% Similarity=0.146 Sum_probs=69.1
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCceEEEEecCcchhh---hHHHHHH
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKE 184 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~~---~~~~l~~ 184 (400)
...++.+.+.+.++.+.+.|+..|.+.| || ++|..+ -.++++.+.+. ..+ .+.+-+.+....+ ..+...+
T Consensus 30 dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grv-pviaGvg~~~t~~ai~la~~a~~ 108 (304)
T 3l21_A 30 DGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRA-RVIAGAGTYDTAHSIRLAKACAA 108 (304)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTS-EEEEECCCSCHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCC-eEEEeCCCCCHHHHHHHHHHHHH
Confidence 3469999999999999999999999998 99 666543 44555544432 233 5555554433433 3355667
Q ss_pred cCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEE
Q 015786 185 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 232 (400)
Q Consensus 185 ~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 232 (400)
.|.+.+.+..-.+. + .+-+.+.+..+.+.+. ++ ++.+.
T Consensus 109 ~Gadavlv~~P~y~-----~----~s~~~l~~~f~~va~a~~l-PiilY 147 (304)
T 3l21_A 109 EGAHGLLVVTPYYS-----K----PPQRGLQAHFTAVADATEL-PMLLY 147 (304)
T ss_dssp HTCSEEEEECCCSS-----C----CCHHHHHHHHHHHHTSCSS-CEEEE
T ss_pred cCCCEEEECCCCCC-----C----CCHHHHHHHHHHHHHhcCC-CEEEE
Confidence 89988777643321 1 2346666666666654 56 66555
No 48
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=78.52 E-value=5.7 Score=36.38 Aligned_cols=108 Identities=20% Similarity=0.187 Sum_probs=67.8
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCceEEEEecCcchhh---hHHHHHHc
Q 015786 115 QLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKES 185 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~~---~~~~l~~~ 185 (400)
..++.+.+.+.++.+.+.|+..|.+.| || |+|..+ -.++++.+.+. ..+ .+.+-+.+....+ ..+...+.
T Consensus 40 g~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grv-pViaGvg~~~t~~ai~la~~A~~~ 118 (315)
T 3na8_A 40 GGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRV-PTIVSVSDLTTAKTVRRAQFAESL 118 (315)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSS-CBEEECCCSSHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCC-cEEEecCCCCHHHHHHHHHHHHhc
Confidence 468999999999999999999999998 99 666543 44455444332 133 4444444333433 33556678
Q ss_pred CCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEEE
Q 015786 186 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVNC 233 (400)
Q Consensus 186 g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~ 233 (400)
|.+.+.+-.-.+.+ .+-+.+.+..+.+.+. ++ ++.+.-
T Consensus 119 Gadavlv~~P~y~~---------~s~~~l~~~f~~va~a~~l-PiilYn 157 (315)
T 3na8_A 119 GAEAVMVLPISYWK---------LNEAEVFQHYRAVGEAIGV-PVMLYN 157 (315)
T ss_dssp TCSEEEECCCCSSC---------CCHHHHHHHHHHHHHHCSS-CEEEEE
T ss_pred CCCEEEECCCCCCC---------CCHHHHHHHHHHHHHhCCC-cEEEEe
Confidence 99888775433211 2345666666666554 56 665553
No 49
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=78.50 E-value=15 Score=33.28 Aligned_cols=108 Identities=15% Similarity=0.145 Sum_probs=67.7
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCceEEEEecCcchhh---hHHHHHHc
Q 015786 115 QLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKES 185 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~~---~~~~l~~~ 185 (400)
..++.+.+.+.++.+.+.|+..|.+.| || ++|..+ -.++++.+.+. ..+ .+..-+.+....+ ..+...+.
T Consensus 32 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grv-pviaGvg~~st~~ai~la~~A~~~ 110 (304)
T 3cpr_A 32 GDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRA-KLIAGVGTNNTRTSVELAEAAASA 110 (304)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTS-EEEEECCCSCHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCC-cEEecCCCCCHHHHHHHHHHHHhc
Confidence 468999999999999999999999988 99 566543 34444444332 234 4555554444433 33555678
Q ss_pred CCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEEE
Q 015786 186 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVNC 233 (400)
Q Consensus 186 g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~ 233 (400)
|.+.+.+..-.+. +.+-+.+.+..+.+.+. ++ ++.+.-
T Consensus 111 Gadavlv~~P~y~---------~~~~~~l~~~f~~ia~a~~l-PiilYn 149 (304)
T 3cpr_A 111 GADGLLVVTPYYS---------KPSQEGLLAHFGAIAAATEV-PICLYD 149 (304)
T ss_dssp TCSEEEEECCCSS---------CCCHHHHHHHHHHHHHHCCS-CEEEEE
T ss_pred CCCEEEECCCCCC---------CCCHHHHHHHHHHHHHhcCC-CEEEEe
Confidence 9998877643321 12345666666665553 56 665543
No 50
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=78.28 E-value=17 Score=32.73 Aligned_cols=111 Identities=10% Similarity=0.119 Sum_probs=70.2
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhcC-CCceEEEEecCcchhh---hHHHHHHc
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKLK-GLKTLAMTTNGLTLAR---KLPKLKES 185 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~~-g~~~~~i~TNG~ll~~---~~~~l~~~ 185 (400)
...++.+.+.+.++.+.+.|+..|.+.| || ++|..+ -.++++.+.+.- +-..+..-+.+....+ ..+...+.
T Consensus 18 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~ 97 (294)
T 3b4u_A 18 DGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNA 97 (294)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHT
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhc
Confidence 3569999999999999999999999998 99 667644 456666555432 2114555554433433 33555678
Q ss_pred CCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc----CCCcEEEEE
Q 015786 186 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV----GYNPVKVNC 233 (400)
Q Consensus 186 g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~----g~~~v~i~~ 233 (400)
|.+.+.+..-.+.. ..+-+.+.+..+.+.+. ++ ++.+.-
T Consensus 98 Gadavlv~~P~y~~--------~~s~~~l~~~f~~va~a~p~~~l-PiilYn 140 (294)
T 3b4u_A 98 GARNILLAPPSYFK--------NVSDDGLFAWFSAVFSKIGKDAR-DILVYN 140 (294)
T ss_dssp TCSEEEECCCCSSC--------SCCHHHHHHHHHHHHHHHCTTCC-CEEEEE
T ss_pred CCCEEEEcCCcCCC--------CCCHHHHHHHHHHHHHhcCCCCC-cEEEEE
Confidence 99988776433211 02345666666665554 56 665543
No 51
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=78.23 E-value=15 Score=33.38 Aligned_cols=109 Identities=19% Similarity=0.213 Sum_probs=67.1
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCceEEEEecCcchhh---hHHHHHH
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKE 184 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~~---~~~~l~~ 184 (400)
...++.+.+.+.++.+.+.|+..|.+.| || |+|..+ -.++++.+.+. ..+ .+.+-+.+....+ ..+...+
T Consensus 26 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grv-pViaGvg~~~t~~ai~la~~A~~ 104 (303)
T 2wkj_A 26 QQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKI-KLIAHVGCVSTAESQQLAASAKR 104 (303)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTS-EEEEECCCSSHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCC-cEEEecCCCCHHHHHHHHHHHHh
Confidence 3569999999999999999999999998 99 466543 44455444432 234 4555554433433 3355567
Q ss_pred cCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-C-CCcEEEEE
Q 015786 185 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-G-YNPVKVNC 233 (400)
Q Consensus 185 ~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g-~~~v~i~~ 233 (400)
.|.+.+.+..-.+.+ .+-+.+.+..+.+.+. + + ++.+.-
T Consensus 105 ~Gadavlv~~P~y~~---------~s~~~l~~~f~~va~a~~~l-PiilYn 145 (303)
T 2wkj_A 105 YGFDAVSAVTPFYYP---------FSFEEHCDHYRAIIDSADGL-PMVVYN 145 (303)
T ss_dssp HTCSEEEEECCCSSC---------CCHHHHHHHHHHHHHHHTTC-CEEEEE
T ss_pred CCCCEEEecCCCCCC---------CCHHHHHHHHHHHHHhCCCC-CEEEEe
Confidence 799988776443211 1345555555555443 4 6 665543
No 52
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=78.09 E-value=5.5 Score=36.37 Aligned_cols=112 Identities=14% Similarity=0.132 Sum_probs=68.5
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCceEEEEecCcchhh---hHHHHHH
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKE 184 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~~---~~~~l~~ 184 (400)
...++.+.+.+.++.+.+.|+..|.+.| || |+|..+ -.++++.+.+. ..+ .+..-|.+....+ ..+...+
T Consensus 23 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grv-pviaGvg~~~t~~ai~la~~A~~ 101 (309)
T 3fkr_A 23 TGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRV-PVIVTTSHYSTQVCAARSLRAQQ 101 (309)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSS-CEEEECCCSSHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCC-cEEEecCCchHHHHHHHHHHHHH
Confidence 3569999999999999999999999988 99 666543 44455444332 233 4555554433433 3355667
Q ss_pred cCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHH-cCCCcEEEEE
Q 015786 185 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIE-VGYNPVKVNC 233 (400)
Q Consensus 185 ~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~-~g~~~v~i~~ 233 (400)
.|.+.+.+-.- .|.. ..+.+-+.+.+..+.+.+ .++ ++.+.-
T Consensus 102 ~Gadavlv~~P-----yy~~-~~~~s~~~l~~~f~~va~a~~l-PiilYn 144 (309)
T 3fkr_A 102 LGAAMVMAMPP-----YHGA-TFRVPEAQIFEFYARVSDAIAI-PIMVQD 144 (309)
T ss_dssp TTCSEEEECCS-----CBTT-TBCCCHHHHHHHHHHHHHHCSS-CEEEEE
T ss_pred cCCCEEEEcCC-----CCcc-CCCCCHHHHHHHHHHHHHhcCC-CEEEEe
Confidence 89988877532 1210 011234566666666555 366 666543
No 53
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=78.05 E-value=5.6 Score=36.03 Aligned_cols=108 Identities=17% Similarity=0.246 Sum_probs=68.2
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhcCCCceEEEEecCcchhhh---HHHHHHcC
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKLKGLKTLAMTTNGLTLARK---LPKLKESG 186 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~~g~~~~~i~TNG~ll~~~---~~~l~~~g 186 (400)
...++.+.+.+.++.+.+.|+..|.+.| || |+|..+ -.++++.+.+..+ .+..-+.+....+. .+...+.|
T Consensus 14 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~--gviaGvg~~~t~~ai~la~~A~~~G 91 (293)
T 1w3i_A 14 DNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTN--KIIFQVGGLNLDDAIRLAKLSKDFD 91 (293)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCS--CEEEECCCSCHHHHHHHHHHGGGSC
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcC--CEEEecCCCCHHHHHHHHHHHHhcC
Confidence 3569999999999999999999999998 99 677654 5677777765422 13333433333333 34445678
Q ss_pred CCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEE
Q 015786 187 LTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 232 (400)
Q Consensus 187 ~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 232 (400)
.+.+.+..-.+.+ ..+-+.+.+..+.+.+. ++ ++.+.
T Consensus 92 adavlv~~P~y~~--------~~s~~~l~~~f~~va~a~~l-PiilY 129 (293)
T 1w3i_A 92 IVGIASYAPYYYP--------RMSEKHLVKYFKTLCEVSPH-PVYLY 129 (293)
T ss_dssp CSEEEEECCCSCS--------SCCHHHHHHHHHHHHHHCSS-CEEEE
T ss_pred CCEEEEcCCCCCC--------CCCHHHHHHHHHHHHhhCCC-CEEEE
Confidence 8888776433211 02345566666655554 56 66554
No 54
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=77.72 E-value=14 Score=33.67 Aligned_cols=112 Identities=10% Similarity=0.073 Sum_probs=69.5
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhcC-CCceEEEEecCcchhh---hHHHHHHc
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKLK-GLKTLAMTTNGLTLAR---KLPKLKES 185 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~~-g~~~~~i~TNG~ll~~---~~~~l~~~ 185 (400)
...++.+.+.+.++.+.+.|+..|.+.| || ++|..+ -.++++.+.+.- +-..+..-|.+....+ ..+...+.
T Consensus 29 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~ 108 (307)
T 3s5o_A 29 TAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQV 108 (307)
T ss_dssp TSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHT
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHc
Confidence 3468999999999999999999999998 99 666543 456666655432 2214555454433433 33556678
Q ss_pred CCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEEE
Q 015786 186 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVNC 233 (400)
Q Consensus 186 g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~ 233 (400)
|.+.+.+-.-.+. +...+-+.+.+..+.+.+. ++ ++.+.-
T Consensus 109 Gadavlv~~P~y~-------~~~~s~~~l~~~f~~ia~a~~l-PiilYn 149 (307)
T 3s5o_A 109 GADAAMVVTPCYY-------RGRMSSAALIHHYTKVADLSPI-PVVLYS 149 (307)
T ss_dssp TCSEEEEECCCTT-------GGGCCHHHHHHHHHHHHHHCSS-CEEEEE
T ss_pred CCCEEEEcCCCcC-------CCCCCHHHHHHHHHHHHhhcCC-CEEEEe
Confidence 9998887633321 1112345566666655554 56 665553
No 55
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=77.46 E-value=5.7 Score=36.37 Aligned_cols=109 Identities=13% Similarity=0.146 Sum_probs=68.1
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCceEEEEecCcchhh---hHHHHHH
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKE 184 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~~---~~~~l~~ 184 (400)
...++.+.+.+.++.+.+.|+..|.+.| || |+|..+ -.++++.+.+. ..+ .+.+-+.+....+ ..+...+
T Consensus 38 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grv-pViaGvg~~st~eai~la~~A~~ 116 (314)
T 3qze_A 38 QGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRI-PVIAGTGANSTREAVALTEAAKS 116 (314)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSS-CEEEECCCSSHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCC-cEEEeCCCcCHHHHHHHHHHHHH
Confidence 4569999999999999999999999988 99 677543 34444444322 133 4555554433433 3456667
Q ss_pred cCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEEE
Q 015786 185 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVNC 233 (400)
Q Consensus 185 ~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~ 233 (400)
.|.+.+.+-.-.+. +.+-+.+.+..+.+.+. ++ ++.+.-
T Consensus 117 ~Gadavlv~~P~y~---------~~s~~~l~~~f~~va~a~~l-PiilYn 156 (314)
T 3qze_A 117 GGADACLLVTPYYN---------KPTQEGMYQHFRHIAEAVAI-PQILYN 156 (314)
T ss_dssp TTCSEEEEECCCSS---------CCCHHHHHHHHHHHHHHSCS-CEEEEE
T ss_pred cCCCEEEEcCCCCC---------CCCHHHHHHHHHHHHHhcCC-CEEEEe
Confidence 89988777643221 12345555666555553 66 666553
No 56
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=77.22 E-value=6.3 Score=35.62 Aligned_cols=109 Identities=14% Similarity=0.176 Sum_probs=68.1
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCceEEEEecCcchhh---hHHHHHH
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKE 184 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~~---~~~~l~~ 184 (400)
...++.+.+.+.++.+.+.|+..+.+.| || ++|..+ -.++++.+.+. ..+ .+..-+.+....+ ..+...+
T Consensus 16 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~-pviaGvg~~~t~~ai~la~~a~~ 94 (291)
T 3tak_A 16 DGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRI-PIIAGTGANSTREAIELTKAAKD 94 (291)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSS-CEEEECCCSSHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCC-eEEEeCCCCCHHHHHHHHHHHHh
Confidence 3569999999999999999999999988 99 666543 44455444332 233 4555554433433 3355667
Q ss_pred cCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEEE
Q 015786 185 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVNC 233 (400)
Q Consensus 185 ~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~ 233 (400)
.|.+.+.+..-.+. +.+-+.+.+..+.+.+. ++ ++.+.-
T Consensus 95 ~Gadavlv~~P~y~---------~~~~~~l~~~f~~ia~a~~l-PiilYn 134 (291)
T 3tak_A 95 LGADAALLVTPYYN---------KPTQEGLYQHYKAIAEAVEL-PLILYN 134 (291)
T ss_dssp HTCSEEEEECCCSS---------CCCHHHHHHHHHHHHHHCCS-CEEEEE
T ss_pred cCCCEEEEcCCCCC---------CCCHHHHHHHHHHHHHhcCC-CEEEEe
Confidence 89998877643321 12345566666655553 66 665553
No 57
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=77.12 E-value=5.5 Score=35.93 Aligned_cols=108 Identities=13% Similarity=0.076 Sum_probs=67.4
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhcC-CCceEEEEecCcchh-hhHHHHHHcCCC
Q 015786 115 QLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKLK-GLKTLAMTTNGLTLA-RKLPKLKESGLT 188 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~~-g~~~~~i~TNG~ll~-~~~~~l~~~g~~ 188 (400)
..++.+.+.+.++.+.+.|+..|.+.| || |+|..+ -.++++.+.+.. ++ -+.+.+|.+.-. +..+...+.|.+
T Consensus 14 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~gv-i~Gvg~~~t~~ai~la~~A~~~Gad 92 (286)
T 2r91_A 14 GRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARRV-IVQVASLNADEAIALAKYAESRGAE 92 (286)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSSE-EEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred CccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCE-EEeeCCCCHHHHHHHHHHHHhcCCC
Confidence 458999999999999999999999988 99 677644 456666665432 32 233333332222 334556678999
Q ss_pred eEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEE
Q 015786 189 SVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 232 (400)
Q Consensus 189 ~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 232 (400)
.+.+..-.+. + ..+-+.+.+..+.+.+. ++ ++.+.
T Consensus 93 avlv~~P~y~-----~---~~s~~~l~~~f~~va~a~~l-PiilY 128 (286)
T 2r91_A 93 AVASLPPYYF-----P---RLSERQIAKYFRDLCSAVSI-PVFLY 128 (286)
T ss_dssp EEEECCSCSS-----T---TCCHHHHHHHHHHHHHHCSS-CEEEE
T ss_pred EEEEcCCcCC-----C---CCCHHHHHHHHHHHHHhcCC-CEEEE
Confidence 8887643321 1 02345666666655554 56 66554
No 58
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=77.07 E-value=41 Score=30.11 Aligned_cols=80 Identities=13% Similarity=0.192 Sum_probs=52.3
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCCEEEEEC-C-Cccc-----hhh---HHHHHHHhhhcCCCceEEEEecCcchhhhHHH
Q 015786 112 PKPQLLSLNEILRLAYLFVTSGVDKIRLTG-G-EPTV-----RKD---IEEACFHLSKLKGLKTLAMTTNGLTLARKLPK 181 (400)
Q Consensus 112 ~~~~~~s~e~i~~ii~~~~~~g~~~i~~~G-G-EPll-----~~~---l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~ 181 (400)
......+.+.+.+.+.++.+.|..-|.+.| + .|-. ..+ +..+++.+++..++ .++|.|-- .+.++.
T Consensus 30 dgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~-piSIDT~~---~~va~a 105 (282)
T 1aj0_A 30 DGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEV-WISVDTSK---PEVIRE 105 (282)
T ss_dssp CCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCC-EEEEECCC---HHHHHH
T ss_pred cccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCC-eEEEeCCC---HHHHHH
Confidence 345567889999999999999988888876 2 3431 122 56677777664466 78888743 344566
Q ss_pred HHHcCCCeEEEecCC
Q 015786 182 LKESGLTSVNISLDT 196 (400)
Q Consensus 182 l~~~g~~~i~iSldg 196 (400)
-+++|.+ +.=|+.|
T Consensus 106 Al~aGa~-iINdvsg 119 (282)
T 1aj0_A 106 SAKVGAH-IINDIRS 119 (282)
T ss_dssp HHHTTCC-EEEETTT
T ss_pred HHHcCCC-EEEECCC
Confidence 6666764 4445555
No 59
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=76.60 E-value=42 Score=30.00 Aligned_cols=125 Identities=13% Similarity=0.120 Sum_probs=72.0
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCCEEEEEC-----CCccch-----hhHHHHHHHhhhcCCCceEEEEecCcchhhhHHH
Q 015786 112 PKPQLLSLNEILRLAYLFVTSGVDKIRLTG-----GEPTVR-----KDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPK 181 (400)
Q Consensus 112 ~~~~~~s~e~i~~ii~~~~~~g~~~i~~~G-----GEPll~-----~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~ 181 (400)
......+.+.+.+.+.++.+.|..-|.+.| |-+-.. ..+..+++.+++. ++ .++|.|-- .+.++.
T Consensus 21 dgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~-~~-piSIDT~~---~~va~a 95 (280)
T 1eye_A 21 DGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-GI-TVSIDTMR---ADVARA 95 (280)
T ss_dssp SSCCCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT-TC-CEEEECSC---HHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC-CC-EEEEeCCC---HHHHHH
Confidence 455668899999999999999988888876 211121 1245666666654 66 68888743 344566
Q ss_pred HHHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEE-ecC---C------C-----hhHHHH
Q 015786 182 LKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVV-MRG---F------N-----DDEICD 246 (400)
Q Consensus 182 l~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v-~~~---~------n-----~~el~~ 246 (400)
-+++|.+ +.=|+.|... .+ +.++.+.++|. ++.+...- .+. . + .+.+.+
T Consensus 96 Al~aGa~-iINdvsg~~~-----------d~---~m~~~~a~~~~-~vVlmh~~G~p~tm~~~~~~y~dv~~~v~~~l~~ 159 (280)
T 1eye_A 96 ALQNGAQ-MVNDVSGGRA-----------DP---AMGPLLAEADV-PWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLA 159 (280)
T ss_dssp HHHTTCC-EEEETTTTSS-----------CT---THHHHHHHHTC-CEEEECCCCSCTTCTTSCCCCSSHHHHHHHHHHH
T ss_pred HHHcCCC-EEEECCCCCC-----------CH---HHHHHHHHhCC-eEEEEcCCCCCcchhhcCcchhHHHHHHHHHHHH
Confidence 6666764 4455555310 01 22344456676 66655542 110 0 1 334556
Q ss_pred HHHHHHhCCCe
Q 015786 247 FVELTRDRPIN 257 (400)
Q Consensus 247 l~~~~~~~gv~ 257 (400)
.++.+.+.|+.
T Consensus 160 ~i~~a~~~Gi~ 170 (280)
T 1eye_A 160 SVADAVAAGVD 170 (280)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHcCCC
Confidence 66666777775
No 60
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=76.59 E-value=7.5 Score=35.10 Aligned_cols=105 Identities=14% Similarity=0.181 Sum_probs=63.8
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCceEEEEecCcchhh---hHHHHHHcCC
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKESGL 187 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~~---~~~~l~~~g~ 187 (400)
++.+.+.+.++.+.+.|+..+.+.| || |+|..+ -.++++.+.+. ..+ .+..-+.+....+ ..+...+.|.
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~-pvi~Gvg~~~t~~ai~la~~a~~~Ga 97 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRI-PVIAGTGSNNTAASIAMSKWAESIGV 97 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSS-CEEEECCCSSHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCC-cEEEeCCcccHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999988 99 566543 34444444331 133 4555554433433 3355567899
Q ss_pred CeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEE
Q 015786 188 TSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 232 (400)
Q Consensus 188 ~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 232 (400)
+.+.+..-.+.+ .+-+.+.+..+.+.+. ++ ++.+.
T Consensus 98 davlv~~P~y~~---------~s~~~l~~~f~~ia~a~~l-PiilY 133 (291)
T 3a5f_A 98 DGLLVITPYYNK---------TTQKGLVKHFKAVSDAVST-PIIIY 133 (291)
T ss_dssp SEEEEECCCSSC---------CCHHHHHHHC-CTGGGCCS-CEEEE
T ss_pred CEEEEcCCCCCC---------CCHHHHHHHHHHHHHhcCC-CEEEE
Confidence 988776433211 2345555555554443 45 55444
No 61
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=76.51 E-value=6.9 Score=36.15 Aligned_cols=108 Identities=12% Similarity=0.137 Sum_probs=67.1
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCceEEEEecCcchhh---hHHHHHH
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKE 184 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~~---~~~~l~~ 184 (400)
...++.+.+.+.++.+.+.|+..|.+.| || |+|..+ -.++++.+.+. ..+ .+.+-+.+....+ ..+...+
T Consensus 49 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grv-pViaGvg~~st~eai~la~~A~~ 127 (332)
T 2r8w_A 49 AGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRR-TLMAGIGALRTDEAVALAKDAEA 127 (332)
T ss_dssp TCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSS-EEEEEECCSSHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCC-cEEEecCCCCHHHHHHHHHHHHh
Confidence 3469999999999999999999999998 99 566543 44455544432 134 4555554433433 3355567
Q ss_pred cCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEE
Q 015786 185 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 232 (400)
Q Consensus 185 ~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 232 (400)
.|.+.+.+..-.+. +.+-+.+.+..+.+.+. ++ ++.+.
T Consensus 128 ~Gadavlv~~P~Y~---------~~s~~~l~~~f~~VA~a~~l-PiilY 166 (332)
T 2r8w_A 128 AGADALLLAPVSYT---------PLTQEEAYHHFAAVAGATAL-PLAIY 166 (332)
T ss_dssp HTCSEEEECCCCSS---------CCCHHHHHHHHHHHHHHCSS-CEEEE
T ss_pred cCCCEEEECCCCCC---------CCCHHHHHHHHHHHHHhcCC-CEEEE
Confidence 79998877643321 12345566666655553 56 66544
No 62
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=76.35 E-value=16 Score=32.86 Aligned_cols=109 Identities=12% Similarity=0.081 Sum_probs=67.6
Q ss_pred CCCCCHHHHHHHHHHHHh-CCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCceEEEEecCcchhh---hHHHHH
Q 015786 114 PQLLSLNEILRLAYLFVT-SGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLK 183 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~-~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~~---~~~~l~ 183 (400)
...++.+.+.+.++.+.+ .|+..|.+.| || ++|..+ -.++++.+.+. ..+ .+..-+.+....+ ..+...
T Consensus 18 dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grv-pviaGvg~~~t~~ai~la~~a~ 96 (293)
T 1f6k_A 18 DGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQI-ALIAQVGSVNLKEAVELGKYAT 96 (293)
T ss_dssp TSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSS-EEEEECCCSCHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCC-eEEEecCCCCHHHHHHHHHHHH
Confidence 356999999999999999 9999999998 99 667644 44455544431 234 4555554444433 335556
Q ss_pred HcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEEE
Q 015786 184 ESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVNC 233 (400)
Q Consensus 184 ~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~ 233 (400)
+.|.+.+.+..-.+.+ .+-+.+.+..+.+.+. ++ ++.+.-
T Consensus 97 ~~Gadavlv~~P~y~~---------~~~~~l~~~f~~va~a~~l-PiilYn 137 (293)
T 1f6k_A 97 ELGYDCLSAVTPFYYK---------FSFPEIKHYYDTIIAETGS-NMIVYS 137 (293)
T ss_dssp HHTCSEEEEECCCSSC---------CCHHHHHHHHHHHHHHHCC-CEEEEE
T ss_pred hcCCCEEEECCCCCCC---------CCHHHHHHHHHHHHHhCCC-CEEEEE
Confidence 7799988776443211 1235555555554443 56 665543
No 63
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=76.28 E-value=5.6 Score=36.16 Aligned_cols=110 Identities=14% Similarity=0.175 Sum_probs=67.2
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCc-eEEEEecCcchh-hhHHHHHHc
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLK-TLAMTTNGLTLA-RKLPKLKES 185 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~-~~~i~TNG~ll~-~~~~~l~~~ 185 (400)
...++.+.+.+.++.+.+.|+..|.+.| || |+|..+ -.++++.+.+. ..+. -+.+.+|.+.-. +..+...+.
T Consensus 19 dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~ 98 (300)
T 3eb2_A 19 EGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKL 98 (300)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHc
Confidence 3469999999999999999999999888 99 666543 34444444332 1221 345555554332 334566678
Q ss_pred CCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEEE
Q 015786 186 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVNC 233 (400)
Q Consensus 186 g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~ 233 (400)
|.+.+.+-.-.+.+ .+-+.+.+..+.+.+. ++ ++.+.-
T Consensus 99 Gadavlv~~P~y~~---------~~~~~l~~~f~~va~a~~l-PiilYn 137 (300)
T 3eb2_A 99 GADGILAILEAYFP---------LKDAQIESYFRAIADAVEI-PVVIYT 137 (300)
T ss_dssp TCSEEEEEECCSSC---------CCHHHHHHHHHHHHHHCSS-CEEEEE
T ss_pred CCCEEEEcCCCCCC---------CCHHHHHHHHHHHHHHCCC-CEEEEE
Confidence 99887775433211 2345556666655543 56 665553
No 64
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=76.26 E-value=7.2 Score=34.32 Aligned_cols=117 Identities=15% Similarity=0.162 Sum_probs=68.9
Q ss_pred HHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCeEEE-ecC-CCCHHH
Q 015786 124 RLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNI-SLD-TLVPAK 201 (400)
Q Consensus 124 ~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~i-Sld-g~~~~~ 201 (400)
+.++.+.+.|...|+++. |.. +++.+.++.+++. |. .+.+..|....-+.++.+++. ++.|.+ |++ |+.
T Consensus 100 ~~i~~~~~aGAd~itvH~-Ea~--~~~~~~i~~ir~~-G~-k~Gvalnp~Tp~e~l~~~l~~-vD~VlvMsV~PGfg--- 170 (246)
T 3inp_A 100 ALIESFAKAGATSIVFHP-EAS--EHIDRSLQLIKSF-GI-QAGLALNPATGIDCLKYVESN-IDRVLIMSVNPGFG--- 170 (246)
T ss_dssp HHHHHHHHHTCSEEEECG-GGC--SCHHHHHHHHHTT-TS-EEEEEECTTCCSGGGTTTGGG-CSEEEEECSCTTC----
T ss_pred HHHHHHHHcCCCEEEEcc-ccc--hhHHHHHHHHHHc-CC-eEEEEecCCCCHHHHHHHHhc-CCEEEEeeecCCCC---
Confidence 456777788988999874 443 3567888888875 88 788888865444556666653 776654 554 221
Q ss_pred HHHhhcCCCHHHHHHHHHHHH----HcCCCcEEEEEEEecCCChhHHHHHHHHHHhCCCeEEEE
Q 015786 202 FEFLTRRKGHEKVMESINAAI----EVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINIRFI 261 (400)
Q Consensus 202 ~~~ir~~~~~~~v~~~i~~l~----~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~~~~~ 261 (400)
|..-....++.|+.++ +.|. .+ ...+.-|.|.+.+.++ .+.|+++...
T Consensus 171 -----GQ~fi~~~l~KI~~lr~~~~~~~~-~~--~I~VDGGI~~~ti~~~----~~aGAD~~V~ 222 (246)
T 3inp_A 171 -----GQKFIPAMLDKAKEISKWISSTDR-DI--LLEIDGGVNPYNIAEI----AVCGVNAFVA 222 (246)
T ss_dssp ------CCCCTTHHHHHHHHHHHHHHHTS-CC--EEEEESSCCTTTHHHH----HTTTCCEEEE
T ss_pred -----CcccchHHHHHHHHHHHHHHhcCC-Ce--eEEEECCcCHHHHHHH----HHcCCCEEEE
Confidence 1111122333333333 3455 33 4456667887766554 4568775443
No 65
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=76.16 E-value=13 Score=34.66 Aligned_cols=144 Identities=11% Similarity=0.132 Sum_probs=87.6
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEE--C--CCc-cchhhHHHHHHHhhhcCCCceEEEEecCcchh------hhHHHHHHcC
Q 015786 118 SLNEILRLAYLFVTSGVDKIRLT--G--GEP-TVRKDIEEACFHLSKLKGLKTLAMTTNGLTLA------RKLPKLKESG 186 (400)
Q Consensus 118 s~e~i~~ii~~~~~~g~~~i~~~--G--GEP-ll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~------~~~~~l~~~g 186 (400)
+.++..+.++.+.+.|...|.-+ . +++ .....+.++++++++. |+ .+.+..|+..+. +.+..|.+.|
T Consensus 15 ~~~~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~-g~-~vi~DIsp~~l~~Lg~s~~dl~~~~~lG 92 (372)
T 2p0o_A 15 ITNDTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIAKAE-KM-KIMVDISGEALKRAGFSFDELEPLIELG 92 (372)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHHHHH-TC-EEEEEECHHHHHTTTCBTTBCHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHC-CC-EEEEECCHHHHHHcCCCHHHHHHHHHcC
Confidence 45566688999999998776433 2 344 3446689999999996 88 799999987774 4678889999
Q ss_pred CCeEEEecCCCCHHHHHHhhcCCC----HHH-HHHHHHHHHHcCCC--cEEEEEEEec----CCChhHHHHHHHHHHhCC
Q 015786 187 LTSVNISLDTLVPAKFEFLTRRKG----HEK-VMESINAAIEVGYN--PVKVNCVVMR----GFNDDEICDFVELTRDRP 255 (400)
Q Consensus 187 ~~~i~iSldg~~~~~~~~ir~~~~----~~~-v~~~i~~l~~~g~~--~v~i~~~v~~----~~n~~el~~l~~~~~~~g 255 (400)
++.+.+. +|++.+.-..+...-. -.. ..+-++.+.+.|.+ .+..-....| |...+.+.+--+++++.|
T Consensus 93 i~glRLD-~Gf~~~eia~ls~nlkIeLNASti~~~~l~~l~~~~~n~~~l~a~HNFYPr~~TGLs~~~f~~~n~~~k~~G 171 (372)
T 2p0o_A 93 VTGLRMD-YGITIEQMAHASHKIDIGLNASTITLEEVAELKAHQADFSRLEAWHNYYPRPETGIGTTFFNEKNRWLKELG 171 (372)
T ss_dssp CCEEEEC-SSCCHHHHHHHHTTSEEEEETTTCCHHHHHHHHHTTCCGGGEEEECCCCCSTTCSBCHHHHHHHHHHHHHTT
T ss_pred CCEEEEc-CCCCHHHHHHHhcCCEEEEECccCCHHHHHHHHHcCCChHHeEEeeccCCCCCCCCCHHHHHHHHHHHHHCC
Confidence 9988888 4555544444432110 011 23344555555541 1222222222 345566777777777777
Q ss_pred CeEEEEeeecC
Q 015786 256 INIRFIEFMPF 266 (400)
Q Consensus 256 v~~~~~~~~p~ 266 (400)
+.+ ..|+|-
T Consensus 172 i~t--~AFI~g 180 (372)
T 2p0o_A 172 LQV--FTFVPG 180 (372)
T ss_dssp CEE--EEEECC
T ss_pred CcE--EEEecC
Confidence 643 345554
No 66
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=75.70 E-value=5.9 Score=36.37 Aligned_cols=111 Identities=12% Similarity=0.111 Sum_probs=67.2
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCceEEEEecCcchhh---hHHHHHH
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKE 184 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~~---~~~~l~~ 184 (400)
...++.+.+.+.++.+.+.|+..|.+.| || ++|..+ -.++++.+.+. ..+ .+..-+.+....+ ..+...+
T Consensus 26 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grv-pviaGvg~~~t~~ai~la~~a~~ 104 (318)
T 3qfe_A 26 TDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDF-PIMAGVGAHSTRQVLEHINDASV 104 (318)
T ss_dssp TTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTS-CEEEECCCSSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCC-cEEEeCCCCCHHHHHHHHHHHHH
Confidence 3468999999999999999999999998 99 666543 44455544332 233 4555554433433 3355667
Q ss_pred cCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEEE
Q 015786 185 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVNC 233 (400)
Q Consensus 185 ~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~ 233 (400)
.|.+.+.+-.-. .|. +..+-+.+.+..+.+.+. ++ ++.+.-
T Consensus 105 ~Gadavlv~~P~----y~~---kp~~~~~l~~~f~~ia~a~~l-PiilYn 146 (318)
T 3qfe_A 105 AGANYVLVLPPA----YFG---KATTPPVIKSFFDDVSCQSPL-PVVIYN 146 (318)
T ss_dssp HTCSEEEECCCC----C------CCCHHHHHHHHHHHHHHCSS-CEEEEE
T ss_pred cCCCEEEEeCCc----ccC---CCCCHHHHHHHHHHHHhhCCC-CEEEEe
Confidence 799887775332 121 111245555555555543 56 666554
No 67
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=75.26 E-value=7.3 Score=36.14 Aligned_cols=108 Identities=12% Similarity=0.162 Sum_probs=67.4
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCceEEEEecCcchhh---hHHHHHH
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKE 184 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~~---~~~~l~~ 184 (400)
...++.+.+.+.++.+.+.|+..|.+.| || ++|..+ -.++++.+.+. ..+ .+.+-+.+....+ ..+...+
T Consensus 46 dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grv-pViaGvg~~st~eai~la~~A~~ 124 (343)
T 2v9d_A 46 DGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRV-PVLIGTGGTNARETIELSQHAQQ 124 (343)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSS-CEEEECCSSCHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCC-cEEEecCCCCHHHHHHHHHHHHh
Confidence 3469999999999999999999999988 99 667543 34444444332 133 4555554444433 3355567
Q ss_pred cCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEE
Q 015786 185 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 232 (400)
Q Consensus 185 ~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 232 (400)
.|.+.+.+..-.+. +.+-+.+.+..+.+.+. ++ ++.+.
T Consensus 125 ~Gadavlv~~P~Y~---------~~s~~~l~~~f~~VA~a~~l-PiilY 163 (343)
T 2v9d_A 125 AGADGIVVINPYYW---------KVSEANLIRYFEQVADSVTL-PVMLY 163 (343)
T ss_dssp HTCSEEEEECCSSS---------CCCHHHHHHHHHHHHHTCSS-CEEEE
T ss_pred cCCCEEEECCCCCC---------CCCHHHHHHHHHHHHHhcCC-CEEEE
Confidence 79998877643321 12345556666555554 55 55544
No 68
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=74.31 E-value=14 Score=34.25 Aligned_cols=108 Identities=12% Similarity=0.191 Sum_probs=70.0
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhcCCCceEEEEecCcchhh---hHHHHHHcCC
Q 015786 115 QLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKLKGLKTLAMTTNGLTLAR---KLPKLKESGL 187 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~~g~~~~~i~TNG~ll~~---~~~~l~~~g~ 187 (400)
..++.+.+.+.++.+.+.|+..|.+.| || ++|..+ -.++++. .....+ .+.+-+.+....+ ..+...+.|.
T Consensus 42 g~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~-~~~grv-pViaGvg~~st~eai~la~~A~~~Ga 119 (344)
T 2hmc_A 42 RTPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER-LVKAGI-PVIVGTGAVNTASAVAHAVHAQKVGA 119 (344)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH-HHHTTC-CEEEECCCSSHHHHHHHHHHHHHHTC
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH-HhCCCC-cEEEecCCCCHHHHHHHHHHHHhcCC
Confidence 468999999999999999999999988 99 667644 4555555 222234 4555554444433 3355567799
Q ss_pred CeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHH-c-CCCcEEEEE
Q 015786 188 TSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIE-V-GYNPVKVNC 233 (400)
Q Consensus 188 ~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~-~-g~~~v~i~~ 233 (400)
+.+.+..-.+.. ..+-+.+.+..+.+.+ . ++ ++.+.-
T Consensus 120 davlv~~P~y~~--------~~s~~~l~~~f~~IA~aa~~l-PiilYn 158 (344)
T 2hmc_A 120 KGLMVIPRVLSR--------GSVIAAQKAHFKAILSAAPEI-PAVIYN 158 (344)
T ss_dssp SEEEECCCCSSS--------TTCHHHHHHHHHHHHHHSTTS-CEEEEE
T ss_pred CEEEECCCccCC--------CCCHHHHHHHHHHHHhhCCCC-cEEEEe
Confidence 988876443211 0234667777777766 3 56 665543
No 69
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=74.27 E-value=9 Score=35.76 Aligned_cols=107 Identities=11% Similarity=0.106 Sum_probs=64.8
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCceEEEEecCcchhh---hHHHHHH
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKE 184 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~~---~~~~l~~ 184 (400)
...++.+.+.+.++.+.+.|+..|.+.| || ++|..+ -.++++.+.+. ..+ .+..-|.+....+ ..+...+
T Consensus 74 dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grv-pViaGvg~~st~eai~la~~A~~ 152 (360)
T 4dpp_A 74 DGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSI-KVIGNTGSNSTREAIHATEQGFA 152 (360)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTS-EEEEECCCSSHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCC-eEEEecCCCCHHHHHHHHHHHHH
Confidence 3468999999999999999999999988 99 666543 34444444332 233 4555454433433 2355566
Q ss_pred cCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEE
Q 015786 185 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVN 232 (400)
Q Consensus 185 ~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~ 232 (400)
.|.+.+.+-.-- |. +.+-+.+.+..+.+.+. . ++.+.
T Consensus 153 ~Gadavlvv~Py-----Y~----k~sq~gl~~hf~~IA~a-~-PiilY 189 (360)
T 4dpp_A 153 VGMHAALHINPY-----YG----KTSIEGLIAHFQSVLHM-G-PTIIY 189 (360)
T ss_dssp TTCSEEEEECCC-----SS----CCCHHHHHHHHHTTGGG-S-CEEEE
T ss_pred cCCCEEEEcCCC-----CC----CCCHHHHHHHHHHHHHh-C-CEEEE
Confidence 788877765322 11 12345555555555554 4 55444
No 70
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=74.08 E-value=6.5 Score=35.49 Aligned_cols=107 Identities=12% Similarity=0.155 Sum_probs=66.8
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCceEEEEecCcchhh---hHHHHHHc
Q 015786 115 QLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKES 185 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~~---~~~~l~~~ 185 (400)
..++.+.+.+.++.+.+.|+..+.+.| || |+|..+ -.++++.+.+. ..+ .+..-+.+....+ ..+...+.
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~-pviaGvg~~~t~~ai~la~~a~~~ 94 (289)
T 2yxg_A 16 KEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRV-QVIAGAGSNCTEEAIELSVFAEDV 94 (289)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSS-EEEEECCCSSHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCC-cEEEeCCCCCHHHHHHHHHHHHhc
Confidence 458999999999999999999999998 99 556543 34455544331 134 4555554433433 33555677
Q ss_pred CCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEE
Q 015786 186 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 232 (400)
Q Consensus 186 g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 232 (400)
|.+.+.+..-.+.+ .+-+.+.+..+.+.+. ++ ++.+.
T Consensus 95 Gadavlv~~P~y~~---------~s~~~l~~~f~~ia~a~~l-PiilY 132 (289)
T 2yxg_A 95 GADAVLSITPYYNK---------PTQEGLRKHFGKVAESINL-PIVLY 132 (289)
T ss_dssp TCSEEEEECCCSSC---------CCHHHHHHHHHHHHHHCSS-CEEEE
T ss_pred CCCEEEECCCCCCC---------CCHHHHHHHHHHHHHhcCC-CEEEE
Confidence 99988776433211 2345566666655553 56 66554
No 71
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=73.60 E-value=7.4 Score=35.17 Aligned_cols=107 Identities=15% Similarity=0.181 Sum_probs=66.0
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCceEEEEecCcchhh---hHHHHHHcC
Q 015786 116 LLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKESG 186 (400)
Q Consensus 116 ~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~~---~~~~l~~~g 186 (400)
.++.+.+.+.++.+.+.|+..|.+.| || ++|..+ -.++++.+.+. ..+ .+..-+.+....+ ..+...+.|
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grv-pviaGvg~~~t~~ai~la~~a~~~G 97 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRV-PVIAGTGTNDTEKSIQASIQAKALG 97 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSS-CEEEECCCSCHHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCC-cEEEeCCcccHHHHHHHHHHHHHcC
Confidence 68999999999999999999999998 99 666543 34444444332 233 4555554333433 335566779
Q ss_pred CCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEEE
Q 015786 187 LTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVNC 233 (400)
Q Consensus 187 ~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~ 233 (400)
.+.+.+..-.+.+ .+-+.+.+..+.+.+. ++ ++.+.-
T Consensus 98 adavlv~~P~y~~---------~~~~~l~~~f~~ia~a~~l-PiilYn 135 (292)
T 3daq_A 98 ADAIMLITPYYNK---------TNQRGLVKHFEAIADAVKL-PVVLYN 135 (292)
T ss_dssp CSEEEEECCCSSC---------CCHHHHHHHHHHHHHHHCS-CEEEEE
T ss_pred CCEEEECCCCCCC---------CCHHHHHHHHHHHHHhCCC-CEEEEe
Confidence 9988776433211 1234555555555443 66 666553
No 72
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=73.55 E-value=54 Score=30.18 Aligned_cols=71 Identities=14% Similarity=0.261 Sum_probs=48.7
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEE--CC---------Cccchhh-HHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHH
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLT--GG---------EPTVRKD-IEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKE 184 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~--GG---------EPll~~~-l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~ 184 (400)
-+.+++.+.++++.+.|...|.+. || .|.+.++ +.++++.+++. |+ .+.+...+. +.+...++
T Consensus 164 ~~~~~~~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~-g~-~v~~H~~~~---~~i~~~~~ 238 (403)
T 3gnh_A 164 DSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMA-GI-KVAAHAHGA---SGIREAVR 238 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHT-TC-EEEEEECSH---HHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHC-CC-EEEEEeCCH---HHHHHHHH
Confidence 468888899988888887777765 32 4555555 78888888875 87 677777653 33555666
Q ss_pred cCCCeEEE
Q 015786 185 SGLTSVNI 192 (400)
Q Consensus 185 ~g~~~i~i 192 (400)
.|.+.|.-
T Consensus 239 ~g~~~i~H 246 (403)
T 3gnh_A 239 AGVDTIEH 246 (403)
T ss_dssp TTCSEEEE
T ss_pred hCCCEEec
Confidence 67655443
No 73
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=73.44 E-value=6.6 Score=35.63 Aligned_cols=107 Identities=11% Similarity=0.152 Sum_probs=66.1
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCceEEEEecCcchhh---hHHHHHHc
Q 015786 115 QLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKES 185 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~~---~~~~l~~~ 185 (400)
..++.+.+.+.++.+.+.|+..|.+.| || |+|..+ -.++++.+.+. ..+ .+..-+.+....+ ..+...+.
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grv-pviaGvg~~~t~~ai~la~~A~~~ 94 (297)
T 2rfg_A 16 GQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRV-PVIAGAGSNNPVEAVRYAQHAQQA 94 (297)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSS-CBEEECCCSSHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCC-eEEEccCCCCHHHHHHHHHHHHhc
Confidence 458999999999999999999999988 99 566543 34444444321 123 3444444433333 33555677
Q ss_pred CCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEE
Q 015786 186 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 232 (400)
Q Consensus 186 g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 232 (400)
|.+.+.+..-.+ .+ .+-+.+.+..+.+.+. ++ ++.+.
T Consensus 95 Gadavlv~~P~y-----~~----~s~~~l~~~f~~va~a~~l-PiilY 132 (297)
T 2rfg_A 95 GADAVLCVAGYY-----NR----PSQEGLYQHFKMVHDAIDI-PIIVY 132 (297)
T ss_dssp TCSEEEECCCTT-----TC----CCHHHHHHHHHHHHHHCSS-CEEEE
T ss_pred CCCEEEEcCCCC-----CC----CCHHHHHHHHHHHHHhcCC-CEEEE
Confidence 999888764332 11 2346666666665554 56 66554
No 74
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=73.41 E-value=53 Score=30.10 Aligned_cols=59 Identities=14% Similarity=0.320 Sum_probs=31.8
Q ss_pred HhCCCCEEEEE---CCCccchhh-HHHH----HHHhhh-cCCCceEEEEecCcchhhhHHHHHHcCCCeEE
Q 015786 130 VTSGVDKIRLT---GGEPTVRKD-IEEA----CFHLSK-LKGLKTLAMTTNGLTLARKLPKLKESGLTSVN 191 (400)
Q Consensus 130 ~~~g~~~i~~~---GGEPll~~~-l~~~----i~~~~~-~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~ 191 (400)
.+.|...|.+. ||.+++.|+ +.++ ++.+.+ ..+. ..+..-| -....+..+.+.|++.++
T Consensus 200 i~aGad~i~i~D~~a~~~~lsp~~f~~f~~p~~k~i~~~~~~~--~iih~~g-~~~~~l~~~~~~g~d~i~ 267 (348)
T 4ay7_A 200 VEAGADVIAIADPVASPDLMSPDSFRQFLKSRLQKFASSVNSV--TVLHICG-NVNPILSDMADCGFEGLS 267 (348)
T ss_dssp HHHTCSEEEEECGGGSTTTSCHHHHHHHHHHHHHHHHHHSSSE--EEEECCS-CCHHHHHHHHTSCCSEEE
T ss_pred HhcCCCcceeeccccccccCCHHHHHHHhhHHHHHHHhhccCC--cEEEecC-CcHHHHHHHHHhcccccc
Confidence 34688888886 466678765 3322 222222 2222 1222223 224557888888988654
No 75
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=73.17 E-value=7.3 Score=35.47 Aligned_cols=107 Identities=18% Similarity=0.217 Sum_probs=66.8
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCceEEEEecCcchhh---hHHHHHHc
Q 015786 115 QLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKES 185 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~~---~~~~l~~~ 185 (400)
..++.+.+.+.++.+.+.|+..|.+.| || |+|..+ -.++++.+.+. ..+ .+..-+.+....+ ..+...+.
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grv-pViaGvg~~st~~ai~la~~A~~~ 106 (306)
T 1o5k_A 28 GELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKI-PVIVGAGTNSTEKTLKLVKQAEKL 106 (306)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSS-CEEEECCCSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCC-eEEEcCCCccHHHHHHHHHHHHhc
Confidence 458999999999999999999999988 99 566543 34444444332 233 4555554433433 33555677
Q ss_pred CCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEE
Q 015786 186 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 232 (400)
Q Consensus 186 g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 232 (400)
|.+.+.+..-.+. +.+-+.+.+..+.+.+. ++ ++.+.
T Consensus 107 Gadavlv~~P~y~---------~~s~~~l~~~f~~va~a~~l-PiilY 144 (306)
T 1o5k_A 107 GANGVLVVTPYYN---------KPTQEGLYQHYKYISERTDL-GIVVY 144 (306)
T ss_dssp TCSEEEEECCCSS---------CCCHHHHHHHHHHHHTTCSS-CEEEE
T ss_pred CCCEEEECCCCCC---------CCCHHHHHHHHHHHHHhCCC-CEEEE
Confidence 9998877643321 12346666666666554 55 66554
No 76
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=72.84 E-value=18 Score=32.57 Aligned_cols=108 Identities=18% Similarity=0.203 Sum_probs=67.3
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCceEEEEecCcchhh---hHHHHHHc
Q 015786 115 QLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKES 185 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~~---~~~~l~~~ 185 (400)
..++.+.+.+.++.+.+.|+..+.+.| || |+|..+ -.++++.+.+. ..+ .+..-|.+....+ ..+...+.
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grv-pviaGvg~~~t~~ai~la~~A~~~ 94 (294)
T 2ehh_A 16 GEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRI-KVIAGTGGNATHEAVHLTAHAKEV 94 (294)
T ss_dssp TEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSS-EEEEECCCSCHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCC-cEEEecCCCCHHHHHHHHHHHHhc
Confidence 458999999999999999999999988 99 566543 44455444432 134 4555554444433 33555678
Q ss_pred CCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEEE
Q 015786 186 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVNC 233 (400)
Q Consensus 186 g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~ 233 (400)
|.+.+.+..-.+.+ .+-+.+.+..+.+.+. ++ ++.+.-
T Consensus 95 Gadavlv~~P~y~~---------~s~~~l~~~f~~va~a~~l-PiilYn 133 (294)
T 2ehh_A 95 GADGALVVVPYYNK---------PTQRGLYEHFKTVAQEVDI-PIIIYN 133 (294)
T ss_dssp TCSEEEEECCCSSC---------CCHHHHHHHHHHHHHHCCS-CEEEEE
T ss_pred CCCEEEECCCCCCC---------CCHHHHHHHHHHHHHhcCC-CEEEEe
Confidence 99988776433211 2345566666555553 56 665543
No 77
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=72.56 E-value=42 Score=30.67 Aligned_cols=118 Identities=17% Similarity=0.208 Sum_probs=71.3
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEE---C-CCccchhhHHHHHHHhhhcCC----CceEEEEe---cCcchhhhHHHHHHc
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLT---G-GEPTVRKDIEEACFHLSKLKG----LKTLAMTT---NGLTLARKLPKLKES 185 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~---G-GEPll~~~l~~~i~~~~~~~g----~~~~~i~T---NG~ll~~~~~~l~~~ 185 (400)
.+++.+.++++.+.+.|+..|.|. | +-| .++.++++.+++..+ + .+.+.+ -|.-+.. ...-.++
T Consensus 148 ~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P---~~v~~lv~~l~~~~~~~~~~-~i~~H~Hnd~GlA~AN-~laA~~a 222 (325)
T 3eeg_A 148 ADQAFLARMVEAVIEAGADVVNIPDTTGYMLP---WQYGERIKYLMDNVSNIDKA-ILSAHCHNDLGLATAN-SLAALQN 222 (325)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEECCBSSSCCCH---HHHHHHHHHHHHHCSCGGGS-EEEECBCCTTSCHHHH-HHHHHHH
T ss_pred chHHHHHHHHHHHHhcCCCEEEecCccCCcCH---HHHHHHHHHHHHhCCCCCce-EEEEEeCCCCCHHHHH-HHHHHHh
Confidence 467888888888888888888774 3 333 235566666655322 3 455554 2333322 2333456
Q ss_pred CCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHH-cCCCcEEEEEEEecCCChhHHHHHHHHHHh
Q 015786 186 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIE-VGYNPVKVNCVVMRGFNDDEICDFVELTRD 253 (400)
Q Consensus 186 g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~-~g~~~v~i~~~v~~~~n~~el~~l~~~~~~ 253 (400)
|.+.|..|+.|..+ ..|....+.++.+++.... .|+ ..|.+.+.+.++.+++.+
T Consensus 223 Ga~~vd~tv~GlGe-----r~GN~~lE~vv~~L~~~~~~~g~---------~tgidl~~L~~~s~~v~~ 277 (325)
T 3eeg_A 223 GARQVECTINGIGE-----RAGNTALEEVVMAMECHKETLGL---------ETGINHKKLVPISHLVST 277 (325)
T ss_dssp TCCEEEEBGGGCCS-----TTCCCBHHHHHHHHHHTHHHHCE---------ECCCCGGGHHHHHHHHHH
T ss_pred CCCEEEEecccccc-----cccchhHHHHHHHHHhhhhccCC---------CCCcCHHHHHHHHHHHHH
Confidence 88888888888753 1232337888777775443 454 125677777777777765
No 78
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=72.25 E-value=6.6 Score=35.51 Aligned_cols=108 Identities=19% Similarity=0.232 Sum_probs=66.4
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCceEEEEecCcchhhhH---HHHHH
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLARKL---PKLKE 184 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~~~~---~~l~~ 184 (400)
...++.+.+.+.++.+.+.|+..|.+.| || |+|..+ -.++++.+.+. ..+ .+..-+.+....+.+ +...+
T Consensus 16 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~-pviaGvg~~~t~~ai~la~~a~~ 94 (292)
T 2ojp_A 16 KGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRI-PVIAGTGANATAEAISLTQRFND 94 (292)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSS-CEEEECCCSSHHHHHHHHHHTTT
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCC-cEEEecCCccHHHHHHHHHHHHh
Confidence 3569999999999999999999999988 99 566543 34444444331 133 455555443443333 33445
Q ss_pred cCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEE
Q 015786 185 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 232 (400)
Q Consensus 185 ~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 232 (400)
.|.+.+.+..-.+. +.+-+.+.+..+.+.+. ++ ++.+.
T Consensus 95 ~Gadavlv~~P~y~---------~~s~~~l~~~f~~ia~a~~l-PiilY 133 (292)
T 2ojp_A 95 SGIVGCLTVTPYYN---------RPSQEGLYQHFKAIAEHTDL-PQILY 133 (292)
T ss_dssp SSCSEEEEECCCSS---------CCCHHHHHHHHHHHHTTCSS-CEEEE
T ss_pred cCCCEEEECCCCCC---------CCCHHHHHHHHHHHHHhcCC-CEEEE
Confidence 68888777643321 12346666666666654 55 55544
No 79
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=72.19 E-value=15 Score=31.73 Aligned_cols=117 Identities=13% Similarity=0.132 Sum_probs=72.0
Q ss_pred HHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCeEEE-ecCCCCHHHH
Q 015786 124 RLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNI-SLDTLVPAKF 202 (400)
Q Consensus 124 ~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~i-Sldg~~~~~~ 202 (400)
+.++.+.+.|...|+|++ |..- ++.+.++.+++. |. .+.+..|.....+.+..+.+. ++.|.+ |++ +-
T Consensus 78 ~~i~~~~~aGad~itvH~-Ea~~--~~~~~i~~i~~~-G~-k~gval~p~t~~e~l~~~l~~-~D~Vl~msv~---pG-- 146 (228)
T 3ovp_A 78 QWVKPMAVAGANQYTFHL-EATE--NPGALIKDIREN-GM-KVGLAIKPGTSVEYLAPWANQ-IDMALVMTVE---PG-- 146 (228)
T ss_dssp GGHHHHHHHTCSEEEEEG-GGCS--CHHHHHHHHHHT-TC-EEEEEECTTSCGGGTGGGGGG-CSEEEEESSC---TT--
T ss_pred HHHHHHHHcCCCEEEEcc-CCch--hHHHHHHHHHHc-CC-CEEEEEcCCCCHHHHHHHhcc-CCeEEEeeec---CC--
Confidence 345666778999999986 5442 467888888885 87 688888865444555555554 666653 443 11
Q ss_pred HHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCCCeEEE
Q 015786 203 EFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINIRF 260 (400)
Q Consensus 203 ~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~~~~ 260 (400)
..|..--...++.|+.+++.+. .+ ...+.-|.|.+.+.++++ .|+++..
T Consensus 147 --f~Gq~f~~~~l~ki~~lr~~~~-~~--~I~VdGGI~~~t~~~~~~----aGAd~~V 195 (228)
T 3ovp_A 147 --FGGQKFMEDMMPKVHWLRTQFP-SL--DIEVDGGVGPDTVHKCAE----AGANMIV 195 (228)
T ss_dssp --TCSCCCCGGGHHHHHHHHHHCT-TC--EEEEESSCSTTTHHHHHH----HTCCEEE
T ss_pred --CCCcccCHHHHHHHHHHHHhcC-CC--CEEEeCCcCHHHHHHHHH----cCCCEEE
Confidence 1111112445666777777654 32 345667888877776654 4676543
No 80
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=71.45 E-value=64 Score=32.46 Aligned_cols=101 Identities=7% Similarity=0.013 Sum_probs=70.0
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEECC----------CccchhhHHHHHHHhhhcCCCceEEEEecCcch----hhhHH
Q 015786 115 QLLSLNEILRLAYLFVTSGVDKIRLTGG----------EPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL----ARKLP 180 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g~~~i~~~GG----------EPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll----~~~~~ 180 (400)
.-++.+..++.|+.+++.|...|.+=-| +|--..++.++++|+++. |+ .+.+-.|..-+ ++.+.
T Consensus 304 ~g~n~~~~k~yIDfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~k-gV-~i~lw~~~~~~~~~~~~~~~ 381 (641)
T 3a24_A 304 TGVNNPTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASK-NV-GIILWAGYHAFERDMENVCR 381 (641)
T ss_dssp CSSSHHHHHHHHHHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHHT-TC-EEEEEEEHHHHHTSHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHhc-CC-EEEEEeeCcchHHHHHHHHH
Confidence 3479999999999999999999998422 222234599999999985 88 56665554334 34567
Q ss_pred HHHHcCCCeEEEecC-CCCHHHHHHhhcCCCHHHHHHHHHHHHHcCC
Q 015786 181 KLKESGLTSVNISLD-TLVPAKFEFLTRRKGHEKVMESINAAIEVGY 226 (400)
Q Consensus 181 ~l~~~g~~~i~iSld-g~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~ 226 (400)
.+.+.|++.|.+..= +.+.+. .+...+.++.+.+.++
T Consensus 382 ~~~~~Gv~gvK~Df~~~~~Q~~---------v~~y~~i~~~aA~~~l 419 (641)
T 3a24_A 382 HYAEMGVKGFKVDFMDRDDQEM---------TAFNYRAAEMCAKYKL 419 (641)
T ss_dssp HHHHHTCCEEEEECCCCCSHHH---------HHHHHHHHHHHHHTTC
T ss_pred HHHHcCCCEEEECCCCCCcHHH---------HHHHHHHHHHHHHcCC
Confidence 788899999998863 322222 2444555567778776
No 81
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=70.66 E-value=19 Score=32.65 Aligned_cols=108 Identities=16% Similarity=0.144 Sum_probs=68.6
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc-CC--CceEEEEecCcchhh---hHHHHHH
Q 015786 115 QLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL-KG--LKTLAMTTNGLTLAR---KLPKLKE 184 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~-~g--~~~~~i~TNG~ll~~---~~~~l~~ 184 (400)
..++.+.+.+.++.+.+.|+..|.+.| || ++|..+ -.++++.+.+. .+ + .+..-+.+....+ ..+...+
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rv-pviaGvg~~~t~~ai~la~~a~~ 101 (301)
T 3m5v_A 23 GKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKV-KVLAGAGSNATHEAVGLAKFAKE 101 (301)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSC-EEEEECCCSSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCC-eEEEeCCCCCHHHHHHHHHHHHH
Confidence 358999999999999999999999988 99 666543 44555544432 22 4 5555554444433 3355667
Q ss_pred cCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEEE
Q 015786 185 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVNC 233 (400)
Q Consensus 185 ~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~ 233 (400)
.|.+.+.+..-.+. +.+-+.+.+..+.+.+. ++ ++.+.-
T Consensus 102 ~Gadavlv~~P~y~---------~~s~~~l~~~f~~va~a~~l-PiilYn 141 (301)
T 3m5v_A 102 HGADGILSVAPYYN---------KPTQQGLYEHYKAIAQSVDI-PVLLYN 141 (301)
T ss_dssp TTCSEEEEECCCSS---------CCCHHHHHHHHHHHHHHCSS-CEEEEE
T ss_pred cCCCEEEEcCCCCC---------CCCHHHHHHHHHHHHHhCCC-CEEEEe
Confidence 89988877643321 12345566666665553 66 665553
No 82
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=70.43 E-value=17 Score=33.10 Aligned_cols=107 Identities=14% Similarity=0.134 Sum_probs=67.9
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCceEEEEecCcchhhh---HHHHHHc
Q 015786 115 QLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLARK---LPKLKES 185 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~~~---~~~l~~~ 185 (400)
..++.+.+.+.++.+.+.|+..|.+.| || |+|..+ -.++++.+.+. ..+ .+..-+.+ ...+. .+...+.
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grv-pViaGvg~-st~~ai~la~~A~~~ 105 (314)
T 3d0c_A 28 REIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRA-TVVAGIGY-SVDTAIELGKSAIDS 105 (314)
T ss_dssp CCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSS-EEEEEECS-SHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCC-eEEecCCc-CHHHHHHHHHHHHHc
Confidence 468999999999999999999999988 99 566543 44455444432 234 56666665 54433 3555677
Q ss_pred CCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEEE
Q 015786 186 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVNC 233 (400)
Q Consensus 186 g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~ 233 (400)
|.+.+.+..-.+.+ .+-+.+.+..+.+.+. ++ ++.+.-
T Consensus 106 Gadavlv~~P~y~~---------~s~~~l~~~f~~va~a~~l-PiilYn 144 (314)
T 3d0c_A 106 GADCVMIHQPVHPY---------ITDAGAVEYYRNIIEALDA-PSIIYF 144 (314)
T ss_dssp TCSEEEECCCCCSC---------CCHHHHHHHHHHHHHHSSS-CEEEEE
T ss_pred CCCEEEECCCCCCC---------CCHHHHHHHHHHHHHhCCC-CEEEEe
Confidence 99988776433211 1335555555555543 56 766654
No 83
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=69.84 E-value=70 Score=29.58 Aligned_cols=59 Identities=15% Similarity=0.274 Sum_probs=37.4
Q ss_pred HhCCCCEEEEEC--CCccchhh---------HHHHHHHhh-hc---C--CCceEEEEecCcchhhhHHHHHHcCCCeEEE
Q 015786 130 VTSGVDKIRLTG--GEPTVRKD---------IEEACFHLS-KL---K--GLKTLAMTTNGLTLARKLPKLKESGLTSVNI 192 (400)
Q Consensus 130 ~~~g~~~i~~~G--GEPll~~~---------l~~~i~~~~-~~---~--g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~i 192 (400)
.+.|...|.+.- | .++.|+ +.++++.++ +. . ++ .+.+.+-|. ...+..+.+.|++.+++
T Consensus 207 i~aGad~i~i~D~~~-~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~-p~i~~~~G~--~~~l~~l~~~g~d~i~~ 282 (367)
T 1r3s_A 207 VVAGAQALQLFESHA-GHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPV-PMIIFAKDG--HFALEELAQAGYEVVGL 282 (367)
T ss_dssp HHTTCSEEEEEETTG-GGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCC-CEEEEETTC--GGGHHHHTTSSCSEEEC
T ss_pred HHhCCCEEEEecCcc-ccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCCC-CeEEEcCCc--HHHHHHHHhcCCCEEEe
Confidence 356888887752 3 366544 346677776 43 1 45 456667775 56678888999886654
No 84
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=69.63 E-value=37 Score=31.04 Aligned_cols=58 Identities=7% Similarity=0.151 Sum_probs=37.0
Q ss_pred HhCCCCEEEEEC---CCccchhh---------HHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCeEEE
Q 015786 130 VTSGVDKIRLTG---GEPTVRKD---------IEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNI 192 (400)
Q Consensus 130 ~~~g~~~i~~~G---GEPll~~~---------l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~i 192 (400)
.+.|...|.+.- | +|.|+ +.++++.+++..|+ .+.+.+.|. ...+..+.+.|++.+++
T Consensus 189 ~~aGad~i~i~d~~~~--~lsp~~f~ef~~p~~k~i~~~i~~~~g~-~~i~~~~g~--~~~l~~l~~~g~d~~~~ 258 (338)
T 2eja_A 189 IKAGADVVQIFDSWVN--NLSLEDYGEYVYPYVNYLISELKDFSDT-PVIYFFRGS--SSFIDLAVDYRADALSV 258 (338)
T ss_dssp HHTTCSEEEEEETTGG--GSCHHHHHHHTHHHHHHHHHHHHHHCCC-CEEEEESSH--HHHHHHHTTSCCSEEEC
T ss_pred HHhCCCEEEEecCccc--cCCHHHHHHHhHHHHHHHHHHHhhcCCC-CEEEEcCCc--HHHHHHHHHcCCCEEEe
Confidence 356888777652 3 55544 34666777653355 466667775 56678888889886544
No 85
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=69.28 E-value=37 Score=30.14 Aligned_cols=111 Identities=14% Similarity=0.149 Sum_probs=54.1
Q ss_pred HHHHHHHhhhcCCCceEEEEecCcch----hhhHHHHHHcCCCeEEEecCCCCH---------HHHHHhhcCCCHHHHHH
Q 015786 150 IEEACFHLSKLKGLKTLAMTTNGLTL----ARKLPKLKESGLTSVNISLDTLVP---------AKFEFLTRRKGHEKVME 216 (400)
Q Consensus 150 l~~~i~~~~~~~g~~~~~i~TNG~ll----~~~~~~l~~~g~~~i~iSldg~~~---------~~~~~ir~~~~~~~v~~ 216 (400)
+.+..+.+++.....-+...|.|..- -+.+..|.+.|.+.|.+.+--.+| ...+.+..+-+.+.+++
T Consensus 5 i~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~ 84 (267)
T 3vnd_A 5 YQAKFAALKAQDKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFD 84 (267)
T ss_dssp HHHHHHHHHHHTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHH
Confidence 33444444432211134445666542 234456666777776666333221 22234444445777777
Q ss_pred HHHHHHHc--CCCcEEEEEEEecCCCh---hHHHHHHHHHHhCCCeEEEEeeec
Q 015786 217 SINAAIEV--GYNPVKVNCVVMRGFND---DEICDFVELTRDRPINIRFIEFMP 265 (400)
Q Consensus 217 ~i~~l~~~--g~~~v~i~~~v~~~~n~---~el~~l~~~~~~~gv~~~~~~~~p 265 (400)
.++.+++. .+ ++.+..- .|. -.++.+++.+.+.|++-..+.-.|
T Consensus 85 ~v~~ir~~~~~~-Pivlm~Y----~npv~~~g~e~f~~~~~~aGvdgvii~Dlp 133 (267)
T 3vnd_A 85 IITKVRAQHPDM-PIGLLLY----ANLVFANGIDEFYTKAQAAGVDSVLIADVP 133 (267)
T ss_dssp HHHHHHHHCTTC-CEEEEEC----HHHHHHHCHHHHHHHHHHHTCCEEEETTSC
T ss_pred HHHHHHhcCCCC-CEEEEec----CcHHHHhhHHHHHHHHHHcCCCEEEeCCCC
Confidence 77777764 33 4332211 132 124666666666666544443333
No 86
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=68.88 E-value=8.4 Score=34.81 Aligned_cols=107 Identities=17% Similarity=0.135 Sum_probs=65.6
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCceEEEEecCcchhh---hHHHHHHc
Q 015786 115 QLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKES 185 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~~---~~~~l~~~ 185 (400)
..++.+.+.+.++.+.+.|+..|.+.| || |+|..+ -.++++.+.+. ..+ .+..-+.+....+ ..+...+.
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~-pviaGvg~~~t~~ai~la~~A~~~ 94 (292)
T 2vc6_A 16 DRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRV-PVIAGAGSNSTAEAIAFVRHAQNA 94 (292)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSS-CBEEECCCSSHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCC-cEEEecCCccHHHHHHHHHHHHHc
Confidence 458999999999999999999999988 99 566543 34444444332 123 3444444433333 33555678
Q ss_pred CCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEE
Q 015786 186 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 232 (400)
Q Consensus 186 g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 232 (400)
|.+.+.+..-.+.+ .+-+.+.+..+.+.+. ++ ++.+.
T Consensus 95 Gadavlv~~P~y~~---------~s~~~l~~~f~~ia~a~~l-PiilY 132 (292)
T 2vc6_A 95 GADGVLIVSPYYNK---------PTQEGIYQHFKAIDAASTI-PIIVY 132 (292)
T ss_dssp TCSEEEEECCCSSC---------CCHHHHHHHHHHHHHHCSS-CEEEE
T ss_pred CCCEEEEcCCCCCC---------CCHHHHHHHHHHHHHhCCC-CEEEE
Confidence 99988776443211 2345556655555543 56 66554
No 87
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=68.45 E-value=73 Score=29.25 Aligned_cols=117 Identities=15% Similarity=0.180 Sum_probs=80.8
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEC--CCccchhhHHHHHHHhhhcC--CCceEEEEec---CcchhhhHHHHHHcCCCe
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTG--GEPTVRKDIEEACFHLSKLK--GLKTLAMTTN---GLTLARKLPKLKESGLTS 189 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~G--GEPll~~~l~~~i~~~~~~~--g~~~~~i~TN---G~ll~~~~~~l~~~g~~~ 189 (400)
.+++.+.++++.+.+.|+..|.+.+ |--+ -.++.++++.+++.. .+ .+.+.+. |.-+.. ...-.++|.+.
T Consensus 146 ~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~~-P~~v~~lv~~l~~~~~~~~-pi~~H~Hn~~G~avAn-~laA~~aGa~~ 222 (345)
T 1nvm_A 146 IPAEKLAEQGKLMESYGATCIYMADSGGAMS-MNDIRDRMRAFKAVLKPET-QVGMHAHHNLSLGVAN-SIVAVEEGCDR 222 (345)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECTTCCCC-HHHHHHHHHHHHHHSCTTS-EEEEECBCTTSCHHHH-HHHHHHTTCCE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCccC-HHHHHHHHHHHHHhcCCCc-eEEEEECCCccHHHHH-HHHHHHcCCCE
Confidence 4688999999999999999999976 4422 234788888887764 45 6777652 433333 33445678999
Q ss_pred EEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHh
Q 015786 190 VNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRD 253 (400)
Q Consensus 190 i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~ 253 (400)
|..|+.|..+. .|....+.++.+++. .|+ . .+.+.+.+.++.+++.+
T Consensus 223 vd~tv~GlG~~-----aGN~~le~lv~~L~~---~g~-~--------~~idl~~l~~~~~~~~~ 269 (345)
T 1nvm_A 223 VDASLAGMGAG-----AGNAPLEVFIAVAER---LGW-N--------HGTDLYTLMDAADDIVR 269 (345)
T ss_dssp EEEBGGGCSST-----TCBCBHHHHHHHHHH---HTC-B--------CCSCHHHHHHHHHHTTG
T ss_pred EEecchhccCC-----ccCcCHHHHHHHHHh---cCC-C--------CCCCHHHHHHHHHHHHH
Confidence 99999997641 233348888888774 466 2 35778888888887754
No 88
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=67.66 E-value=75 Score=29.10 Aligned_cols=26 Identities=23% Similarity=0.255 Sum_probs=11.7
Q ss_pred HHHHHHhhhcCCCceEEE-EecCcchhh
Q 015786 151 EEACFHLSKLKGLKTLAM-TTNGLTLAR 177 (400)
Q Consensus 151 ~~~i~~~~~~~g~~~~~i-~TNG~ll~~ 177 (400)
.++++.+.+. |...+.+ .|+|...+.
T Consensus 172 ~~~~~~~~~~-Ga~~i~l~DT~G~~~P~ 198 (337)
T 3ble_A 172 KSLVEHLSKE-HIERIFLPDTLGVLSPE 198 (337)
T ss_dssp HHHHHHHHTS-CCSEEEEECTTCCCCHH
T ss_pred HHHHHHHHHc-CCCEEEEecCCCCcCHH
Confidence 4445544443 4433333 255555543
No 89
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=67.21 E-value=59 Score=27.79 Aligned_cols=127 Identities=15% Similarity=0.159 Sum_probs=80.5
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEec---Ccchh----hhHHHHHHcCC
Q 015786 115 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTN---GLTLA----RKLPKLKESGL 187 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TN---G~ll~----~~~~~l~~~g~ 187 (400)
...+.+++.+++++..+.|...|+ ++|.+......... ++ .+.-.++ |..+. ...+...+.|.
T Consensus 15 p~~t~~~i~~l~~~a~~~g~~~v~-------v~~~~v~~~~~~l~--~v-~v~~v~~~P~g~~~~~~k~~~~~~A~~~Ga 84 (225)
T 1mzh_A 15 PHLSEKEIEEFVLKSEELGIYAVC-------VNPYHVKLASSIAK--KV-KVCCVIGFPLGLNKTSVKVKEAVEAVRDGA 84 (225)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEE-------ECGGGHHHHHHHCS--SS-EEEEEESTTTCCSCHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHhCCeEEE-------ECHHHHHHHHHHhc--CC-ceeeEecCCCCccchhhhHHHHHHHHHcCC
Confidence 346899999999999999988877 55655444332222 34 3332333 32222 23356667888
Q ss_pred CeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEE-ecCCChhHHHHHHHHHHhCCCeEE
Q 015786 188 TSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVV-MRGFNDDEICDFVELTRDRPINIR 259 (400)
Q Consensus 188 ~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v-~~~~n~~el~~l~~~~~~~gv~~~ 259 (400)
+.|.+-++-.. + +.+.++.+.+-++.+++..- ++.+...+ ..+.+.+++.++.+.+.+.|+++.
T Consensus 85 d~Id~viN~g~------~-~~~~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I 149 (225)
T 1mzh_A 85 QELDIVWNLSA------F-KSEKYDFVVEELKEIFRETP-SAVHKVIVETPYLNEEEIKKAVEICIEAGADFI 149 (225)
T ss_dssp SEEEEECCHHH------H-HTTCHHHHHHHHHHHHHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEE
T ss_pred CEEEEEecHHH------H-hcCChHHHHHHHHHHHHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEE
Confidence 88886554321 2 22347788888888888743 45455433 244577789999999999998754
No 90
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=66.80 E-value=72 Score=28.58 Aligned_cols=118 Identities=12% Similarity=0.095 Sum_probs=70.7
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEC----CCccchhhHHHHHHHhhhcCC----CceEEEEe---cCcchhhhHHHHHHc
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTG----GEPTVRKDIEEACFHLSKLKG----LKTLAMTT---NGLTLARKLPKLKES 185 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~G----GEPll~~~l~~~i~~~~~~~g----~~~~~i~T---NG~ll~~~~~~l~~~ 185 (400)
.+++.+.++++.+.+.|+..|.|.- +-|. ++.++++.+++..+ + .+.+.+ -|.-+.. ...-.++
T Consensus 147 ~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~---~v~~lv~~l~~~~~~~~~~-~l~~H~Hnd~Gla~AN-~laA~~a 221 (293)
T 3ewb_X 147 SDRAFLIEAVQTAIDAGATVINIPDTVGYTNPT---EFGQLFQDLRREIKQFDDI-IFASHCHDDLGMATAN-ALAAIEN 221 (293)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECSSSCCCHH---HHHHHHHHHHHHCTTGGGS-EEEEECBCTTSCHHHH-HHHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCCCCHH---HHHHHHHHHHHhcCCccCc-eEEEEeCCCcChHHHH-HHHHHHh
Confidence 4677888888888888888888853 3332 35566666654322 2 355554 2333322 3333457
Q ss_pred CCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHH-HcCCCcEEEEEEEecCCChhHHHHHHHHHHh
Q 015786 186 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAI-EVGYNPVKVNCVVMRGFNDDEICDFVELTRD 253 (400)
Q Consensus 186 g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~-~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~ 253 (400)
|++.|..|+.|..+ -.|....+.++.+++... ..|+ ..|.+.+.+.++.+++.+
T Consensus 222 Ga~~vd~sv~GlGe-----raGN~~~E~vv~~L~~~~~~~g~---------~tgidl~~L~~~s~~v~~ 276 (293)
T 3ewb_X 222 GARRVEGTINGIGE-----RAGNTALEEVAVALHIRKDFYQA---------ETNIVLNQFKNSSDLISR 276 (293)
T ss_dssp TCCEEEEBGGGCCT-----TTCBCBHHHHHHHHHHTHHHHCE---------EECCCGGGHHHHHHHHHH
T ss_pred CCCEEEeecccccc-----ccccHhHHHHHHHHHhhhhhcCC---------CCCCCHHHHHHHHHHHHH
Confidence 88888888888754 122233777777776532 2454 125677778888887776
No 91
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=66.70 E-value=59 Score=28.20 Aligned_cols=119 Identities=13% Similarity=0.080 Sum_probs=70.3
Q ss_pred HHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcC--------CCceEEEEecCcchhhhHHHHHHcCCCeEEE-e
Q 015786 123 LRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLK--------GLKTLAMTTNGLTLARKLPKLKESGLTSVNI-S 193 (400)
Q Consensus 123 ~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~--------g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~i-S 193 (400)
...++.+.+.|...|+++.+-. .++.+.++.+++.. |. .+.+..|.....+.+..+++ +++.|.+ |
T Consensus 82 ~~~i~~~~~aGAd~itvH~ea~---~~~~~~i~~i~~~~~~~~~~~~g~-~~gv~l~p~Tp~~~l~~~l~-~~D~vlvMs 156 (237)
T 3cu2_A 82 LEVAKAVVANGANLVTLQLEQY---HDFALTIEWLAKQKTTYANQVYPV-LIGACLCPETPISELEPYLD-QIDVIQLLT 156 (237)
T ss_dssp HHHHHHHHHTTCSEEEEETTCT---TSHHHHHHHHTTCEEEETTEEEEC-EEEEEECTTSCGGGGTTTTT-TCSEEEEES
T ss_pred HHHHHHHHHcCCCEEEEecCCc---ccHHHHHHHHHhcccccccccCCc-eEEEEEeCCChHHHHHHHhh-cCceeeeee
Confidence 5577888889999999997543 34667888887731 55 67888886544455555554 4787766 5
Q ss_pred cCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc----CCCcEEEEEEEecCCChhHHHHHHHHHHhCCCeE
Q 015786 194 LDTLVPAKFEFLTRRKGHEKVMESINAAIEV----GYNPVKVNCVVMRGFNDDEICDFVELTRDRPINI 258 (400)
Q Consensus 194 ldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~----g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~~ 258 (400)
++..-. +..--...++.|+.+++. |. . +...+.-|.|.+.+.++.+- ..|+++
T Consensus 157 v~pgfg-------gq~f~~~~l~ki~~lr~~~~~~~~-~--~~I~vdGGI~~~~~~~~~~~--~aGad~ 213 (237)
T 3cu2_A 157 LDPRNG-------TKYPSELILDRVIQVEKRLGNRRV-E--KLINIDGSMTLELAKYFKQG--THQIDW 213 (237)
T ss_dssp EETTTT-------EECCHHHHHHHHHHHHHHHGGGGG-G--CEEEEESSCCHHHHHHHHHS--SSCCCC
T ss_pred eccCcC-------CeecChhHHHHHHHHHHHHHhcCC-C--ceEEEECCcCHHHHHHHHHh--CCCCcE
Confidence 554211 111134455555555543 22 2 23445667888777776430 046654
No 92
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=66.33 E-value=64 Score=28.39 Aligned_cols=116 Identities=15% Similarity=0.184 Sum_probs=72.4
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEC--CCccchhh------------------HHHHHHHhhhc-CCCceEEEE--ecCc
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTG--GEPTVRKD------------------IEEACFHLSKL-KGLKTLAMT--TNGL 173 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~G--GEPll~~~------------------l~~~i~~~~~~-~g~~~~~i~--TNG~ 173 (400)
.+.+.+.++++.+.+.|+..|.+.. .+|++... ..++++.+++. ..+ .+.+- .|..
T Consensus 28 p~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~-Pv~lm~y~n~v 106 (268)
T 1qop_A 28 PGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTI-PIGLLMYANLV 106 (268)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSS-CEEEEECHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCC-CEEEEEcccHH
Confidence 4567888999999999988877754 67765322 23678888775 455 45543 3532
Q ss_pred c---hhhhHHHHHHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHH
Q 015786 174 T---LARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVEL 250 (400)
Q Consensus 174 l---l~~~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~ 250 (400)
. ..+.++.+.+.|.+.+.+. |-+. +.+.+.++.+++.|+ .+ ...+.+....+.+.++.+.
T Consensus 107 ~~~g~~~~~~~~~~aGadgii~~-d~~~-------------e~~~~~~~~~~~~g~-~~--i~l~~p~t~~~~i~~i~~~ 169 (268)
T 1qop_A 107 FNNGIDAFYARCEQVGVDSVLVA-DVPV-------------EESAPFRQAALRHNI-AP--IFICPPNADDDLLRQVASY 169 (268)
T ss_dssp HTTCHHHHHHHHHHHTCCEEEET-TCCG-------------GGCHHHHHHHHHTTC-EE--ECEECTTCCHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHcCCCEEEEc-CCCH-------------HHHHHHHHHHHHcCC-cE--EEEECCCCCHHHHHHHHhh
Confidence 2 2466788999999888775 3321 334455567778887 43 2344453344556666655
No 93
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=66.15 E-value=53 Score=28.77 Aligned_cols=108 Identities=18% Similarity=0.299 Sum_probs=69.0
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEECC---Cccchh-hHHHHHHHhhhcCCCceEEEEecCcch-h-h----hHHHHHH
Q 015786 115 QLLSLNEILRLAYLFVTSGVDKIRLTGG---EPTVRK-DIEEACFHLSKLKGLKTLAMTTNGLTL-A-R----KLPKLKE 184 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g~~~i~~~GG---EPll~~-~l~~~i~~~~~~~g~~~~~i~TNG~ll-~-~----~~~~l~~ 184 (400)
..++.+.+++.++.+.+.|+ -..+|| |-.+.. .+.++++.+++. |+..+.| ++|++- + + .++.+.+
T Consensus 50 ~l~~~~~l~eki~l~~~~gV--~v~~GGTl~E~~~~qg~~~~yl~~~k~l-Gf~~iEi-S~G~i~l~~~~~~~~I~~~~~ 125 (251)
T 1qwg_A 50 AVIDRDVVKEKINYYKDWGI--KVYPGGTLFEYAYSKGKFDEFLNECEKL-GFEAVEI-SDGSSDISLEERNNAIKRAKD 125 (251)
T ss_dssp GGSCHHHHHHHHHHHHTTTC--EEEECHHHHHHHHHTTCHHHHHHHHHHH-TCCEEEE-CCSSSCCCHHHHHHHHHHHHH
T ss_pred eecCHHHHHHHHHHHHHcCC--eEECCcHHHHHHHHcCcHHHHHHHHHHc-CCCEEEE-CCCcccCCHHHHHHHHHHHHH
Confidence 34678889999999988883 233454 444443 489999999996 8866666 677653 2 2 2355566
Q ss_pred cCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEE
Q 015786 185 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKV 231 (400)
Q Consensus 185 ~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i 231 (400)
.|+ .+..-+-.-+++.. +.-+-++.++.++...++|...|.+
T Consensus 126 ~G~-~v~~EvG~k~~~~~----~~~~~~~~I~~~~~~LeAGA~~Vii 167 (251)
T 1qwg_A 126 NGF-MVLTEVGKKMPDKD----KQLTIDDRIKLINFDLDAGADYVII 167 (251)
T ss_dssp TTC-EEEEEECCSSHHHH----TTCCHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCC-EEeeeccccCCccc----CCCCHHHHHHHHHHHHHCCCcEEEE
Confidence 776 34333322122221 2334789999999999999843433
No 94
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=66.10 E-value=82 Score=34.28 Aligned_cols=130 Identities=15% Similarity=0.110 Sum_probs=80.0
Q ss_pred CCCCHHHHHHHHHHHHhCC--CCEEEEECCC--c----cchhhHHHHHHHhhh-cCCCceEEEEecC-----c------c
Q 015786 115 QLLSLNEILRLAYLFVTSG--VDKIRLTGGE--P----TVRKDIEEACFHLSK-LKGLKTLAMTTNG-----L------T 174 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g--~~~i~~~GGE--P----ll~~~l~~~i~~~~~-~~g~~~~~i~TNG-----~------l 174 (400)
..++.++..++++.+.+.| +..|-+.||- | ++..+=.+.++.+++ .++. .+.+...| + .
T Consensus 568 ~~~~~~dkl~ia~~L~~~gv~~~~iE~~gga~f~~~~~f~~~~p~e~l~~~~~~~~~~-~~~~l~R~~n~vg~~~~~~~~ 646 (1165)
T 2qf7_A 568 TRMRTYDIARIAGTYSHALPNLLSLECWGGATFDVSMRFLTEDPWERLALIREGAPNL-LLQMLLRGANGVGYTNYPDNV 646 (1165)
T ss_dssp TCCCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHHHCCCHHHHHHHHHHHCTTS-EEEEEEETTTBTCSSCCCHHH
T ss_pred ccCCHHHHHHHHHHHHHhCCCceEEEeCCCCccHHHHhhcCCCHHHHHHHHHHHchhh-HHHHHhccccccccccCCchh
Confidence 3589999999999999985 5557776543 3 334221222222222 1233 44544432 2 1
Q ss_pred hhhhHHHHHHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEec--------CCChhHHHH
Q 015786 175 LARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMR--------GFNDDEICD 246 (400)
Q Consensus 175 l~~~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~--------~~n~~el~~ 246 (400)
..+.++...+.|++.+.|. ++.+ ..+.+...++.+++.|. .+.....++. ..+.+.+.+
T Consensus 647 ~~~~i~~a~~~g~d~irif-~sl~-----------~~~~~~~~i~~~~~~g~-~v~~~i~~~~~~~d~~r~~~~~~~~~~ 713 (1165)
T 2qf7_A 647 VKYFVRQAAKGGIDLFRVF-DCLN-----------WVENMRVSMDAIAEENK-LCEAAICYTGDILNSARPKYDLKYYTN 713 (1165)
T ss_dssp HHHHHHHHHHHTCCEEEEE-CTTC-----------CGGGGHHHHHHHHHTTC-EEEEEEECCSCTTCTTSGGGCHHHHHH
T ss_pred HHHHHHHHHhcCcCEEEEE-eeHH-----------HHHHHHHHHHHHHhccc-eEEEEEEEeccccCCCCCCCCHHHHHH
Confidence 1345677888899998884 4432 24567778888899987 6655443331 135667888
Q ss_pred HHHHHHhCCCeE
Q 015786 247 FVELTRDRPINI 258 (400)
Q Consensus 247 l~~~~~~~gv~~ 258 (400)
+++.+.+.|++.
T Consensus 714 ~~~~~~~~Ga~~ 725 (1165)
T 2qf7_A 714 LAVELEKAGAHI 725 (1165)
T ss_dssp HHHHHHHTTCSE
T ss_pred HHHHHHHcCCCE
Confidence 888888888864
No 95
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=65.78 E-value=45 Score=33.55 Aligned_cols=137 Identities=12% Similarity=0.055 Sum_probs=79.9
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhc----CCCceEEEEecCc--chhhhHHHHHHcC
Q 015786 113 KPQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKL----KGLKTLAMTTNGL--TLARKLPKLKESG 186 (400)
Q Consensus 113 ~~~~~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~----~g~~~~~i~TNG~--ll~~~~~~l~~~g 186 (400)
....|+.++-.++++.+.+.|++.|-. |=|-..+.=.+.++.+.+. .+. .+...+-.. .++..++.+..++
T Consensus 86 ~g~~~s~eeKl~Ia~~L~~lGVd~IEa--GfP~asp~D~e~v~~i~~~~l~~~~~-~i~aL~r~~~~did~a~eal~~a~ 162 (644)
T 3hq1_A 86 LIDPMSPARKRRMFDLLVRMGYKEIEV--GFPSASQTDFDFVREIIEQGAIPDDV-TIQVLTQCRPELIERTFQACSGAP 162 (644)
T ss_dssp CSSCCCHHHHHHHHHHHHHHTCSEEEE--ECTTTCHHHHHHHHHHHHTTCSCTTC-EEEEEEESCHHHHHHHHHHHTTCS
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEE--eCCCCChhHHHHHHHHHhcCCCCCCe-EEEEEecCCHhhHHHHHHHHhcCC
Confidence 456799999999999999999998765 3377766545566666553 133 333333221 1233345556677
Q ss_pred CCeEEEecCCCCHHHHHHhhcCCC----HHHHHHHHHHHHHcCCC--cEEEEEEEec----CCChhHHHHHHHHHHhC
Q 015786 187 LTSVNISLDTLVPAKFEFLTRRKG----HEKVMESINAAIEVGYN--PVKVNCVVMR----GFNDDEICDFVELTRDR 254 (400)
Q Consensus 187 ~~~i~iSldg~~~~~~~~ir~~~~----~~~v~~~i~~l~~~g~~--~v~i~~~v~~----~~n~~el~~l~~~~~~~ 254 (400)
...|.+.+-+. +.|.+..=+.+ .+.+.+.++.+++.+.. .+.+.+.+.. ..+.+.+.++++.+.+.
T Consensus 163 ~~~Vhif~stS--d~h~~~~l~~s~eevle~~~~~v~~a~~~~~~~~~~~~~v~fs~Edasrtd~dfl~ev~~aa~ea 238 (644)
T 3hq1_A 163 RAIVHFYNSTS--ILQRRVVFRANRAEVQAIATDGARKCVEQAAKYPGTQWRFEYSPESYTGTELEYAKQVCDAVGEV 238 (644)
T ss_dssp EEEEEEEEECC--HHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHSCSSEEEEEEEEETGGGSCHHHHHHHHHHHHHH
T ss_pred CCEEEEEecCC--HHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhccCceEEEEEcCcccCCCCHHHHHHHHHHHHHh
Confidence 77788877773 34433322234 44445555555555320 2234444432 13556677777777764
No 96
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=65.71 E-value=76 Score=29.18 Aligned_cols=58 Identities=16% Similarity=0.220 Sum_probs=37.6
Q ss_pred HhCCCCEEEEEC--CCccchhh---------HHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCeEEE
Q 015786 130 VTSGVDKIRLTG--GEPTVRKD---------IEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNI 192 (400)
Q Consensus 130 ~~~g~~~i~~~G--GEPll~~~---------l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~i 192 (400)
.+.|+..|.+.- |. ++.++ +.++++.+++. +. .+.+.+-|. ...+..+.+.|++.+.+
T Consensus 203 ~~aGad~i~i~D~~~~-~lsp~~f~ef~~p~~~~i~~~i~~~-g~-~~i~~~~G~--~~~l~~l~~~g~d~~~~ 271 (359)
T 2inf_A 203 IKAGAKAIQIFDSWVG-ALNQADYRTYIKPVMNRIFSELAKE-NV-PLIMFGVGA--SHLAGDWHDLPLDVVGL 271 (359)
T ss_dssp HHTTCSEEEEECTTGG-GSCHHHHHHHTHHHHHHHHHHHGGG-CS-CEEEECTTC--GGGHHHHHTSSCSEEEC
T ss_pred HHhCCCEEEEeCCccc-cCCHHHHHHHhHHHHHHHHHHHHHc-CC-cEEEEcCCc--HHHHHHHHHhCCCEEEe
Confidence 457888888752 21 56543 34666777664 65 455667776 55678888999986654
No 97
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=65.42 E-value=34 Score=30.83 Aligned_cols=132 Identities=17% Similarity=0.197 Sum_probs=75.5
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCCEEEEEC-----CCccchh--h---HHHHHHHhhhcCCCceEEEEecCcchhhhHHH
Q 015786 112 PKPQLLSLNEILRLAYLFVTSGVDKIRLTG-----GEPTVRK--D---IEEACFHLSKLKGLKTLAMTTNGLTLARKLPK 181 (400)
Q Consensus 112 ~~~~~~s~e~i~~ii~~~~~~g~~~i~~~G-----GEPll~~--~---l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~ 181 (400)
......+.+.+.+.+.++.+.|..-|.+.| |-+-... + +..+++.+++. ++ .++|.|-= .+.++.
T Consensus 38 dgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~-~v-piSIDT~~---~~Va~a 112 (294)
T 2y5s_A 38 DGGRFLARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPL-NV-PLSIDTYK---PAVMRA 112 (294)
T ss_dssp ------CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGG-CS-CEEEECCC---HHHHHH
T ss_pred CCCCcCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhC-CC-eEEEECCC---HHHHHH
Confidence 445567888999989999999988888876 3222321 2 55666666654 66 68888742 345566
Q ss_pred HHHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEE-ecC--------C-C-----hhHHHH
Q 015786 182 LKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVV-MRG--------F-N-----DDEICD 246 (400)
Q Consensus 182 l~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v-~~~--------~-n-----~~el~~ 246 (400)
-+++|.+ +.=|+.|.. . + +.+..+.++|. ++.+...- .+. + + .+.+.+
T Consensus 113 Al~aGa~-iINdVsg~~-d-----------~---~m~~~~a~~~~-~vVlmh~~G~p~tm~~~~~~y~dv~~ev~~~l~~ 175 (294)
T 2y5s_A 113 ALAAGAD-LINDIWGFR-Q-----------P---GAIDAVRDGNS-GLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAA 175 (294)
T ss_dssp HHHHTCS-EEEETTTTC-S-----------T---THHHHHSSSSC-EEEEECCCEETTTTEECCCCCSSHHHHHHHHHHH
T ss_pred HHHcCCC-EEEECCCCC-c-----------h---HHHHHHHHhCC-CEEEECCCCCCccccccCCccccHHHHHHHHHHH
Confidence 6666774 555666642 0 1 22345567787 76666542 121 0 1 234666
Q ss_pred HHHHHHhCCCeEEEEeeec
Q 015786 247 FVELTRDRPINIRFIEFMP 265 (400)
Q Consensus 247 l~~~~~~~gv~~~~~~~~p 265 (400)
.++.+.+.|+.-.-+-+-|
T Consensus 176 ~i~~a~~~Gi~~~~IilDP 194 (294)
T 2y5s_A 176 RAQALRDAGVAAERICVDP 194 (294)
T ss_dssp HHHHHHHTTCCGGGEEEEC
T ss_pred HHHHHHHcCCChhhEEEeC
Confidence 7777778888532233344
No 98
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=65.39 E-value=97 Score=29.82 Aligned_cols=114 Identities=24% Similarity=0.356 Sum_probs=71.4
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEE---C-CCccchhhHHHHHHHhhhcCCCceEEEEe---cCcchhhhHHHHHHcCCCeE
Q 015786 118 SLNEILRLAYLFVTSGVDKIRLT---G-GEPTVRKDIEEACFHLSKLKGLKTLAMTT---NGLTLARKLPKLKESGLTSV 190 (400)
Q Consensus 118 s~e~i~~ii~~~~~~g~~~i~~~---G-GEPll~~~l~~~i~~~~~~~g~~~~~i~T---NG~ll~~~~~~l~~~g~~~i 190 (400)
+++.+.++++.+.+.|...|.|- | +-| .++.++++.+++..++ .+.+.| -|.-+.. ...-.++|++.|
T Consensus 156 ~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~P---~~v~~lv~~l~~~~~~-~i~~H~Hnd~GlAvAN-~laAv~AGa~~V 230 (464)
T 2nx9_A 156 NLQTWVDVAQQLAELGVDSIALKDMAGILTP---YAAEELVSTLKKQVDV-ELHLHCHSTAGLADMT-LLKAIEAGVDRV 230 (464)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTSCCCH---HHHHHHHHHHHHHCCS-CEEEEECCTTSCHHHH-HHHHHHTTCSEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCCCCcCH---HHHHHHHHHHHHhcCC-eEEEEECCCCChHHHH-HHHHHHhCCCEE
Confidence 78888888888888888888884 3 333 2356666666654455 567765 2333322 333446788999
Q ss_pred EEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHh
Q 015786 191 NISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRD 253 (400)
Q Consensus 191 ~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~ 253 (400)
..|+.|..+. .|....+.++.+++. .|+ . .+.+.+.+.++.+++.+
T Consensus 231 D~ti~g~ger-----tGN~~lE~lv~~L~~---~g~-~--------tgidl~~L~~is~~v~~ 276 (464)
T 2nx9_A 231 DTAISSMSGT-----YGHPATESLVATLQG---TGY-D--------TGLDIAKLEQIAAYFRD 276 (464)
T ss_dssp EEBCGGGCST-----TSCCBHHHHHHHHTT---STT-C--------CCCCHHHHHHHHHHHHH
T ss_pred EEeccccCCC-----CcCHHHHHHHHHHHh---cCC-C--------cccCHHHHHHHHHHHHH
Confidence 9998886431 333337777777664 455 2 24566666666666654
No 99
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=65.06 E-value=35 Score=31.13 Aligned_cols=81 Identities=16% Similarity=0.003 Sum_probs=46.4
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCCEEEEEC-----CCccch-hh---HHHHHHHhhhcC-CCceEEEEecCcchhhhHHH
Q 015786 112 PKPQLLSLNEILRLAYLFVTSGVDKIRLTG-----GEPTVR-KD---IEEACFHLSKLK-GLKTLAMTTNGLTLARKLPK 181 (400)
Q Consensus 112 ~~~~~~s~e~i~~ii~~~~~~g~~~i~~~G-----GEPll~-~~---l~~~i~~~~~~~-g~~~~~i~TNG~ll~~~~~~ 181 (400)
......+.+.+.+.+.++.+.|..-|.+.| |+|.-- .+ +..+++.+++.. ++ .++|.|-= .+.++.
T Consensus 57 dgg~~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~v-pISIDT~~---~~Vaea 132 (318)
T 2vp8_A 57 DKGATFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQ-LISVDTWR---AQVAKA 132 (318)
T ss_dssp -------CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTC-EEEEECSC---HHHHHH
T ss_pred CCCccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCC-eEEEeCCC---HHHHHH
Confidence 455667889999988999999988787765 333221 22 345577777643 66 78888742 345566
Q ss_pred HHHcCCCeEEEecCCC
Q 015786 182 LKESGLTSVNISLDTL 197 (400)
Q Consensus 182 l~~~g~~~i~iSldg~ 197 (400)
-+++|.+ +.=|+.|.
T Consensus 133 Al~aGa~-iINDVsg~ 147 (318)
T 2vp8_A 133 ACAAGAD-LINDTWGG 147 (318)
T ss_dssp HHHHTCC-EEEETTSS
T ss_pred HHHhCCC-EEEECCCC
Confidence 6666774 55566664
No 100
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=64.97 E-value=26 Score=31.90 Aligned_cols=109 Identities=17% Similarity=0.173 Sum_probs=67.8
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCceEEEEecCcchhhh---HHHHHH
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLARK---LPKLKE 184 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~~~---~~~l~~ 184 (400)
...++.+.+.+.++.+.+.|+..|.+.| || ++|..+ -.++++.+.+. ..+ .+..-+.+....+. .+...+
T Consensus 22 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grv-pViaGvg~~~t~~ai~la~~A~~ 100 (311)
T 3h5d_A 22 DGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRV-PLIAGVGTNDTRDSIEFVKEVAE 100 (311)
T ss_dssp TSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSS-CEEEECCCSSHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCC-cEEEeCCCcCHHHHHHHHHHHHh
Confidence 3468999999999999999999999998 99 556543 45555555443 123 45555544344333 344556
Q ss_pred cCC-CeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEEE
Q 015786 185 SGL-TSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVNC 233 (400)
Q Consensus 185 ~g~-~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~ 233 (400)
.|. +.+.+..-.+.+ .+-+.+.+..+.+.+. ++ ++.+.-
T Consensus 101 ~Ga~davlv~~P~y~~---------~s~~~l~~~f~~va~a~~l-PiilYn 141 (311)
T 3h5d_A 101 FGGFAAGLAIVPYYNK---------PSQEGMYQHFKAIADASDL-PIIIYN 141 (311)
T ss_dssp SCCCSEEEEECCCSSC---------CCHHHHHHHHHHHHHSCSS-CEEEEE
T ss_pred cCCCcEEEEcCCCCCC---------CCHHHHHHHHHHHHHhCCC-CEEEEe
Confidence 675 877766433211 2345666666666664 56 665553
No 101
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=64.22 E-value=24 Score=32.20 Aligned_cols=108 Identities=15% Similarity=0.112 Sum_probs=67.5
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhc--CCCceEEEEecCcchhh---hHHHHHH
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKE 184 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~~---~~~~l~~ 184 (400)
...++.+.+.+.++.+.+.|+..|.+.| || |+|..+ -.++++.+.+. ..+ .+..-+. ....+ ..+...+
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grv-pViaGvg-~~t~~ai~la~~A~~ 104 (316)
T 3e96_A 27 DGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRA-LVVAGIG-YATSTAIELGNAAKA 104 (316)
T ss_dssp TCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSS-EEEEEEC-SSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCC-cEEEEeC-cCHHHHHHHHHHHHh
Confidence 3469999999999999999999999988 99 677544 44455544332 234 5555553 33333 3355567
Q ss_pred cCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEEE
Q 015786 185 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVNC 233 (400)
Q Consensus 185 ~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~ 233 (400)
.|.+.+.+..-- |. ..+-+.+++..+.+.+. ++ ++.+.-
T Consensus 105 ~Gadavlv~~P~-----y~----~~s~~~l~~~f~~va~a~~l-PiilYn 144 (316)
T 3e96_A 105 AGADAVMIHMPI-----HP----YVTAGGVYAYFRDIIEALDF-PSLVYF 144 (316)
T ss_dssp HTCSEEEECCCC-----CS----CCCHHHHHHHHHHHHHHHTS-CEEEEE
T ss_pred cCCCEEEEcCCC-----CC----CCCHHHHHHHHHHHHHhCCC-CEEEEe
Confidence 799888775322 11 12345566666555543 56 766654
No 102
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=63.92 E-value=59 Score=29.31 Aligned_cols=125 Identities=14% Similarity=0.137 Sum_probs=72.5
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEEC--C----Cccch-hh---HHHHHHHhhhcCCCceEEEEecCcchhhhHHHH
Q 015786 113 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--G----EPTVR-KD---IEEACFHLSKLKGLKTLAMTTNGLTLARKLPKL 182 (400)
Q Consensus 113 ~~~~~s~e~i~~ii~~~~~~g~~~i~~~G--G----EPll~-~~---l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l 182 (400)
.....+.+.+.+.++++.+.|..-|.+.| . +|.-- .+ +..+++.+++..++ .++|.|-- .+.++.-
T Consensus 56 gg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~v-piSIDT~~---~~V~~aA 131 (297)
T 1tx2_A 56 GGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKL-PISIDTYK---AEVAKQA 131 (297)
T ss_dssp SCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCS-CEEEECSC---HHHHHHH
T ss_pred CCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCc-eEEEeCCC---HHHHHHH
Confidence 34456788888888888899988888875 1 22221 22 34555777654466 68888842 3445666
Q ss_pred HHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEE-ecCC-C-----hhHHHHHHHHHHhCC
Q 015786 183 KESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVV-MRGF-N-----DDEICDFVELTRDRP 255 (400)
Q Consensus 183 ~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v-~~~~-n-----~~el~~l~~~~~~~g 255 (400)
+++|.+.| =|+.+... .+ +.++.+.++|. ++.+...- .+.. + .+.+.+.++.+.+.|
T Consensus 132 l~aGa~iI-Ndvsg~~~-----------d~---~m~~~aa~~g~-~vVlmh~~G~p~y~d~v~ev~~~l~~~i~~a~~~G 195 (297)
T 1tx2_A 132 IEAGAHII-NDIWGAKA-----------EP---KIAEVAAHYDV-PIILMHNRDNMNYRNLMADMIADLYDSIKIAKDAG 195 (297)
T ss_dssp HHHTCCEE-EETTTTSS-----------CT---HHHHHHHHHTC-CEEEECCCSCCCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred HHcCCCEE-EECCCCCC-----------CH---HHHHHHHHhCC-cEEEEeCCCCCCcchHHHHHHHHHHHHHHHHHHcC
Confidence 66677544 56666320 11 22344456676 66555532 2211 1 234666677777778
Q ss_pred Ce
Q 015786 256 IN 257 (400)
Q Consensus 256 v~ 257 (400)
+.
T Consensus 196 I~ 197 (297)
T 1tx2_A 196 VR 197 (297)
T ss_dssp CC
T ss_pred CC
Confidence 75
No 103
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=63.91 E-value=74 Score=27.73 Aligned_cols=113 Identities=10% Similarity=0.083 Sum_probs=64.3
Q ss_pred CCHHHHHHHHHHHHhCCCC--EEEEECCC--ccchhhHHHHHHHhhhcC-CC-ceEEEEecCcchhhhHHHHHHcCCCeE
Q 015786 117 LSLNEILRLAYLFVTSGVD--KIRLTGGE--PTVRKDIEEACFHLSKLK-GL-KTLAMTTNGLTLARKLPKLKESGLTSV 190 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~--~i~~~GGE--Pll~~~l~~~i~~~~~~~-g~-~~~~i~TNG~ll~~~~~~l~~~g~~~i 190 (400)
.++..+.+.++.+.+.|.+ .+.+.-|- |.+... .++++.+++.. .. ..+.+-++- ..+.++.+.++|.+.|
T Consensus 37 aD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G-~~~v~~lr~~~p~~~ldvHLmv~~--p~~~i~~~~~aGAd~i 113 (246)
T 3inp_A 37 ADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFG-PMVLKALRDYGITAGMDVHLMVKP--VDALIESFAKAGATSI 113 (246)
T ss_dssp SCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCC-HHHHHHHHHHTCCSCEEEEEECSS--CHHHHHHHHHHTCSEE
T ss_pred CChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcC-HHHHHHHHHhCCCCeEEEEEeeCC--HHHHHHHHHHcCCCEE
Confidence 3455566667777777765 45555565 444322 23444444432 22 134443321 2456788999999999
Q ss_pred EEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHH
Q 015786 191 NISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVE 249 (400)
Q Consensus 191 ~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~ 249 (400)
+|..++.+ .+.+.++.+++.|. .+++ .+.++...+.++++++
T Consensus 114 tvH~Ea~~--------------~~~~~i~~ir~~G~-k~Gv--alnp~Tp~e~l~~~l~ 155 (246)
T 3inp_A 114 VFHPEASE--------------HIDRSLQLIKSFGI-QAGL--ALNPATGIDCLKYVES 155 (246)
T ss_dssp EECGGGCS--------------CHHHHHHHHHTTTS-EEEE--EECTTCCSGGGTTTGG
T ss_pred EEccccch--------------hHHHHHHHHHHcCC-eEEE--EecCCCCHHHHHHHHh
Confidence 99987742 12345556677888 5555 4666544555555544
No 104
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=63.39 E-value=1.4e+02 Score=32.47 Aligned_cols=129 Identities=10% Similarity=0.045 Sum_probs=81.7
Q ss_pred CCCHHHHHHHHHHHHhC--CCCEEEEECCC------ccchhhHHHHHHHhhhc-CCCceEEEEecC---cc--------h
Q 015786 116 LLSLNEILRLAYLFVTS--GVDKIRLTGGE------PTVRKDIEEACFHLSKL-KGLKTLAMTTNG---LT--------L 175 (400)
Q Consensus 116 ~~s~e~i~~ii~~~~~~--g~~~i~~~GGE------Pll~~~l~~~i~~~~~~-~g~~~~~i~TNG---~l--------l 175 (400)
.++.++...+++.+.+. |+..+-..||. |+++.+=.+.++.+++. ++. .+.+...| .- .
T Consensus 551 r~~~~~kl~ia~~L~~~~~G~~~lE~~Gga~~e~~~~~~~e~~~e~l~~l~~~~~~~-~~~~l~R~~n~vgy~~~pd~v~ 629 (1150)
T 3hbl_A 551 RVRTKDMINIASKTADVFKDGFSLEMWGGATFDVAYNFLKENPWERLERLRKAIPNV-LFQMLLRASNAVGYKNYPDNVI 629 (1150)
T ss_dssp CCCHHHHHHHHHHHHHHTTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCCSS-EEEEEEETTTBTCSSCCCHHHH
T ss_pred CCCHHHHHHHHHHHHHhhCCCcEEeecCCceEEecccccCCCHHHHHHHHHHhCCCC-eEEEEeccccccccccCCchhH
Confidence 48999999999999887 89999988865 56665544555655542 344 45555533 21 2
Q ss_pred hhhHHHHHHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEec---------CCChhHHHH
Q 015786 176 ARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMR---------GFNDDEICD 246 (400)
Q Consensus 176 ~~~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~---------~~n~~el~~ 246 (400)
.+.++...+.|++.|.|..-. ++ .+ .....++...+.|. .+......+. ..+.+.+.+
T Consensus 630 ~~~v~~a~~~Gvd~irif~~~-sd-~~----------~~~~~~~~~~e~g~-~~~~~i~~~~~~~~pe~~~~~~~~~~~~ 696 (1150)
T 3hbl_A 630 HKFVQESAKAGIDVFRIFDSL-NW-VD----------QMKVANEAVQEAGK-ISEGTICYTGDILNPERSNIYTLEYYVK 696 (1150)
T ss_dssp HHHHHHHHHTTCCEEEEECTT-CC-GG----------GGHHHHHHHHHTTC-EEEEEEECCSCTTCTTTCSSSSHHHHHH
T ss_pred HHHHHHHHhCCcCEEEEEeeC-CH-HH----------HHHHHHHHHHHHhh-heeEEEeecccccChhhcCCCCHHHHHH
Confidence 234677778899998887544 22 21 22344555666776 4444433331 134566788
Q ss_pred HHHHHHhCCCeE
Q 015786 247 FVELTRDRPINI 258 (400)
Q Consensus 247 l~~~~~~~gv~~ 258 (400)
+++.+.+.|++.
T Consensus 697 ~a~~~~~~Ga~~ 708 (1150)
T 3hbl_A 697 LAKELEREGFHI 708 (1150)
T ss_dssp HHHHHHHTTCSE
T ss_pred HHHHHHHcCCCe
Confidence 888888888864
No 105
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=62.67 E-value=32 Score=31.63 Aligned_cols=82 Identities=20% Similarity=0.288 Sum_probs=54.6
Q ss_pred CCCCCCHHHHHHHHHHHH-------hCCCCEEEEECCC---------ccch-------------hh-HHHHHHHhhhcCC
Q 015786 113 KPQLLSLNEILRLAYLFV-------TSGVDKIRLTGGE---------PTVR-------------KD-IEEACFHLSKLKG 162 (400)
Q Consensus 113 ~~~~~s~e~i~~ii~~~~-------~~g~~~i~~~GGE---------Pll~-------------~~-l~~~i~~~~~~~g 162 (400)
..+.||.++|.++++.+. +.|.+.|.+.+|. |..+ .. +.++++.+++.-.
T Consensus 130 ~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~ 209 (340)
T 3gr7_A 130 TPKEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWD 209 (340)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCC
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcC
Confidence 356799999999988664 3588999999874 6542 22 3678888776433
Q ss_pred Cc-eEEEEec-----Ccchh---hhHHHHHHcCCCeEEEec
Q 015786 163 LK-TLAMTTN-----GLTLA---RKLPKLKESGLTSVNISL 194 (400)
Q Consensus 163 ~~-~~~i~TN-----G~ll~---~~~~~l~~~g~~~i~iSl 194 (400)
+. .+.|..+ |...+ +.++.|.+.|++.|.+|-
T Consensus 210 ~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~ 250 (340)
T 3gr7_A 210 GPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSS 250 (340)
T ss_dssp SCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEEC
T ss_pred CceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 31 3445443 22232 334777889999999985
No 106
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=62.49 E-value=80 Score=27.65 Aligned_cols=18 Identities=6% Similarity=0.178 Sum_probs=9.1
Q ss_pred CChhHHHHHHHHHHhCCC
Q 015786 239 FNDDEICDFVELTRDRPI 256 (400)
Q Consensus 239 ~n~~el~~l~~~~~~~gv 256 (400)
...+++.++++.++++|+
T Consensus 131 l~~ee~~~~~~~~~~~gl 148 (262)
T 2ekc_A 131 LPPEEAEELKAVMKKYVL 148 (262)
T ss_dssp CCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHcCC
Confidence 344455555555555554
No 107
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=61.98 E-value=73 Score=28.75 Aligned_cols=78 Identities=19% Similarity=0.250 Sum_probs=37.7
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEC--CCccchhh-HHHHHHHhhhcC-CCceEEEEe---cCcchhhhHHHHHHcCCCe
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTG--GEPTVRKD-IEEACFHLSKLK-GLKTLAMTT---NGLTLARKLPKLKESGLTS 189 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~G--GEPll~~~-l~~~i~~~~~~~-g~~~~~i~T---NG~ll~~~~~~l~~~g~~~ 189 (400)
.+++.+.++++.+.+.|+..|.|.- | .+.|. +.++++.+++.. ++ .+.+.+ -|.-+... ..-.++|.+.
T Consensus 154 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G--~~~P~~v~~lv~~l~~~~~~~-~l~~H~Hnd~Gla~AN~-laAv~aGa~~ 229 (307)
T 1ydo_A 154 VPIEQVIRLSEALFEFGISELSLGDTIG--AANPAQVETVLEALLARFPAN-QIALHFHDTRGTALANM-VTALQMGITV 229 (307)
T ss_dssp CCHHHHHHHHHHHHHHTCSCEEEECSSC--CCCHHHHHHHHHHHHTTSCGG-GEEEECBGGGSCHHHHH-HHHHHHTCCE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEcCCCC--CcCHHHHHHHHHHHHHhCCCC-eEEEEECCCCchHHHHH-HHHHHhCCCE
Confidence 3556666666666666666666642 2 22333 455555555432 23 345443 23222222 2223446666
Q ss_pred EEEecCCCC
Q 015786 190 VNISLDTLV 198 (400)
Q Consensus 190 i~iSldg~~ 198 (400)
|..|+.|..
T Consensus 230 vd~tv~GlG 238 (307)
T 1ydo_A 230 FDGSAGGLG 238 (307)
T ss_dssp EEEBGGGCC
T ss_pred EEEcccccC
Confidence 666666654
No 108
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=61.61 E-value=60 Score=28.77 Aligned_cols=20 Identities=20% Similarity=0.182 Sum_probs=9.3
Q ss_pred CCChhHHHHHHHHHHhCCCe
Q 015786 238 GFNDDEICDFVELTRDRPIN 257 (400)
Q Consensus 238 ~~n~~el~~l~~~~~~~gv~ 257 (400)
+...+|..++.+.+++.|++
T Consensus 133 Dlp~ee~~~~~~~~~~~gl~ 152 (271)
T 3nav_A 133 DVPTNESQPFVAAAEKFGIQ 152 (271)
T ss_dssp TSCGGGCHHHHHHHHHTTCE
T ss_pred CCCHHHHHHHHHHHHHcCCe
Confidence 33444444455555554443
No 109
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=61.23 E-value=17 Score=32.61 Aligned_cols=106 Identities=16% Similarity=0.086 Sum_probs=66.7
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC--CC-ccchhh-HHHHHHHhhhcCCCceEEEEecCcchh---hhHHHHHHcC
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKLKGLKTLAMTTNGLTLA---RKLPKLKESG 186 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G--GE-Pll~~~-l~~~i~~~~~~~g~~~~~i~TNG~ll~---~~~~~l~~~g 186 (400)
...++.+.+.+.++.+.+. +..|.+.| || ++|..+ -.++++.+.+ .+ .+..-+.+.... +..+...+.|
T Consensus 13 dg~iD~~~l~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~--rv-pviaGvg~~~t~~ai~la~~A~~~G 88 (283)
T 2pcq_A 13 EGRLDEEAFRELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP--RK-PFLVGLMEETLPQAEGALLEAKAAG 88 (283)
T ss_dssp TCCBCHHHHHHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC--SS-CCEEEECCSSHHHHHHHHHHHHHHT
T ss_pred CCCcCHHHHHHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh--CC-cEEEeCCCCCHHHHHHHHHHHHhcC
Confidence 3568999999999999888 99999988 99 566544 6677777765 33 334444333333 3335566789
Q ss_pred CCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEE
Q 015786 187 LTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNC 233 (400)
Q Consensus 187 ~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~ 233 (400)
.+.+.+..-.+. +.. +-+.+.+..+.+.+ ++ ++.+.-
T Consensus 89 adavlv~~P~y~-----~~~---~~~~l~~~f~~va~-~l-PiilYn 125 (283)
T 2pcq_A 89 AMALLATPPRYY-----HGS---LGAGLLRYYEALAE-KM-PLFLYH 125 (283)
T ss_dssp CSEEEECCCCTT-----GGG---TTTHHHHHHHHHHH-HS-CEEEEE
T ss_pred CCEEEecCCcCC-----CCC---CHHHHHHHHHHHhc-CC-CEEEEe
Confidence 998877644321 110 22445555555555 67 666543
No 110
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=60.12 E-value=28 Score=24.22 Aligned_cols=54 Identities=22% Similarity=0.329 Sum_probs=29.6
Q ss_pred CCccchhhHHHHHHHhhhcCCCceEEEEecCcchh--hh-----HHHHHHcCCCeEEEecCC
Q 015786 142 GEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLA--RK-----LPKLKESGLTSVNISLDT 196 (400)
Q Consensus 142 GEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~--~~-----~~~l~~~g~~~i~iSldg 196 (400)
-|.-|.+-+.+++.++++. |.+++.|+-.+..-. ++ +..+.+.|...|++.+||
T Consensus 25 teselqkvlnelmdyikkq-gakrvrisitartkkeaekfaailikvfaelgyndinvtfdg 85 (106)
T 1qys_A 25 TESELQKVLNELMDYIKKQ-GAKRVRISITARTKKEAEKFAAILIKVFAELGYNDINVTFDG 85 (106)
T ss_dssp SSSHHHHHHHHHHHHHHHH-CCSEEEEEEECSSHHHHHHHHHHHHHHHHHTTCCEEEEEEET
T ss_pred eHHHHHHHHHHHHHHHHhc-CCcEEEEEEEecchhHHHHHHHHHHHHHHHhCCcceeEEEcC
Confidence 4555556666777777764 544555543332221 11 233445666677777777
No 111
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A
Probab=60.08 E-value=16 Score=32.28 Aligned_cols=53 Identities=23% Similarity=0.315 Sum_probs=39.8
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEec
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTN 171 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TN 171 (400)
++.+++.+.+.+....|-..+.+++|+|+++--..++++.+.+. |+ .+.+.-.
T Consensus 60 ~~~~~~~~~i~~~~~~G~~Va~L~~GDP~iyg~~~~l~~~l~~~-gi-~veviPG 112 (264)
T 3ndc_A 60 MSLDAIIDTIAEAHAAGQDVARLHSGDLSIWSAMGEQLRRLRAL-NI-PYDVTPG 112 (264)
T ss_dssp SCHHHHHHHHHHHHHHTCCEEEEESBCTTSSCSHHHHHHHHHHT-TC-CEEEECC
T ss_pred CCHHHHHHHHHHHHHCCCeEEEEeCCCCccccHHHHHHHHHHhC-CC-CEEEeCC
Confidence 56777777666555566678888999999988777888888874 77 6776543
No 112
>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile}
Probab=60.01 E-value=20 Score=31.46 Aligned_cols=54 Identities=22% Similarity=0.293 Sum_probs=40.8
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecC
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNG 172 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG 172 (400)
++.+++.+.+.+..+.|-..+.+++|+|+++--..++++.+.+. |+ .+.+.-.-
T Consensus 61 ~~~~~~~~~i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~-gi-~veviPGi 114 (253)
T 4e16_A 61 MDLQEIIDVMREGIENNKSVVRLQTGDFSIYGSIREQVEDLNKL-NI-DYDCTPGV 114 (253)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEESBCTTTTCCHHHHHHHHHHH-TC-CEEEECCC
T ss_pred CCHHHHHHHHHHHHHCCCcEEEEeCCCCccccCHHHHHHHHHHC-CC-CEEEECCH
Confidence 56677777666666667778888999999987777888888875 77 67775543
No 113
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=59.77 E-value=42 Score=31.24 Aligned_cols=83 Identities=13% Similarity=0.189 Sum_probs=54.0
Q ss_pred CCCCCCHHHHHHHHHHHH-------hCCCCEEEEECCC---------ccch-------------hh-HHHHHHHhhhcCC
Q 015786 113 KPQLLSLNEILRLAYLFV-------TSGVDKIRLTGGE---------PTVR-------------KD-IEEACFHLSKLKG 162 (400)
Q Consensus 113 ~~~~~s~e~i~~ii~~~~-------~~g~~~i~~~GGE---------Pll~-------------~~-l~~~i~~~~~~~g 162 (400)
..+.||.++|.++++.+. +.|.+.|.+.||. |..+ .. +.++++.+++.-+
T Consensus 139 ~pr~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg 218 (362)
T 4ab4_A 139 TPRALETEEINDIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWG 218 (362)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcC
Confidence 356799999999988663 4789999999886 7643 22 3678887776433
Q ss_pred CceEEEEecCc----------chh---hhHHHHHHcCCCeEEEecC
Q 015786 163 LKTLAMTTNGL----------TLA---RKLPKLKESGLTSVNISLD 195 (400)
Q Consensus 163 ~~~~~i~TNG~----------ll~---~~~~~l~~~g~~~i~iSld 195 (400)
-..+.+--++. ..+ +.++.|.+.|++.|.+|--
T Consensus 219 ~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~ 264 (362)
T 4ab4_A 219 AQRVGVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSRER 264 (362)
T ss_dssp GGGEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCceEEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCC
Confidence 21233333322 111 2346677889999999853
No 114
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=59.50 E-value=91 Score=27.29 Aligned_cols=117 Identities=15% Similarity=0.089 Sum_probs=73.5
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEC--CCccch------------------hhHHHHHHHhhhcC-CCceEEEE--ecCc
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTG--GEPTVR------------------KDIEEACFHLSKLK-GLKTLAMT--TNGL 173 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~G--GEPll~------------------~~l~~~i~~~~~~~-g~~~~~i~--TNG~ 173 (400)
.+.++..++++.+.+.|+..|-+.. .+|+.. .++.++++.+++.. .+ .+.+- .|..
T Consensus 28 p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~-Pi~~m~y~n~v 106 (262)
T 2ekc_A 28 PDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDI-PFLLMTYYNPI 106 (262)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTS-CEEEECCHHHH
T ss_pred CChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCC-CEEEEecCcHH
Confidence 3567889999999999999888843 455532 12346677777654 55 45553 2421
Q ss_pred c---hhhhHHHHHHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHH
Q 015786 174 T---LARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVEL 250 (400)
Q Consensus 174 l---l~~~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~ 250 (400)
. +.+.++.+.+.|.+.+.+. |-+ ++.+.+.++.+.++|+ .+ ...+.+....+.+.++.+.
T Consensus 107 ~~~g~~~f~~~~~~aG~dgvii~-dl~-------------~ee~~~~~~~~~~~gl-~~--i~l~~p~t~~~rl~~ia~~ 169 (262)
T 2ekc_A 107 FRIGLEKFCRLSREKGIDGFIVP-DLP-------------PEEAEELKAVMKKYVL-SF--VPLGAPTSTRKRIKLICEA 169 (262)
T ss_dssp HHHCHHHHHHHHHHTTCCEEECT-TCC-------------HHHHHHHHHHHHHTTC-EE--CCEECTTCCHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHcCCCEEEEC-CCC-------------HHHHHHHHHHHHHcCC-cE--EEEeCCCCCHHHHHHHHHh
Confidence 1 1355678889999877774 332 3667777788888887 43 2233443344566666665
Q ss_pred H
Q 015786 251 T 251 (400)
Q Consensus 251 ~ 251 (400)
.
T Consensus 170 a 170 (262)
T 2ekc_A 170 A 170 (262)
T ss_dssp C
T ss_pred C
Confidence 4
No 115
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=59.50 E-value=46 Score=30.96 Aligned_cols=58 Identities=17% Similarity=0.275 Sum_probs=33.6
Q ss_pred hCCCCEEEEEC--CCccchhh---------HHHHHHHhhhcC---CCceEEEEecCcchhhhHHHHHHcCCCeEEE
Q 015786 131 TSGVDKIRLTG--GEPTVRKD---------IEEACFHLSKLK---GLKTLAMTTNGLTLARKLPKLKESGLTSVNI 192 (400)
Q Consensus 131 ~~g~~~i~~~G--GEPll~~~---------l~~~i~~~~~~~---g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~i 192 (400)
+.|...|.+.- | .+|.|+ +.++++.+++.. ++ .+...+.|. ...+..+.+.|.+.+.+
T Consensus 208 ~aGad~i~ifDs~~-~~Lsp~~f~ef~~Py~k~i~~~l~~~~~g~~~-pvi~f~~g~--~~~l~~l~~~g~d~i~~ 279 (368)
T 4exq_A 208 EAGAQAVMIFDTWG-GALADGAYQRFSLDYIRRVVAQLKREHDGARV-PAIAFTKGG--GLWLEDLAATGVDAVGL 279 (368)
T ss_dssp HHTCSEEEEEETTG-GGSCTTHHHHHTHHHHHHHHHTSCCEETTEEC-CEEEEETTC--GGGHHHHHTSSCSEEEC
T ss_pred HhCCCEEEEeCCcc-ccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCC-cEEEEcCCc--HHHHHHHHHhCCCEEee
Confidence 45888887642 2 255544 335555555421 24 445556564 35567788889887654
No 116
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=59.49 E-value=94 Score=27.48 Aligned_cols=131 Identities=11% Similarity=0.022 Sum_probs=79.2
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEECCCccch--hhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHc--CCCeEE
Q 015786 116 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVR--KDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKES--GLTSVN 191 (400)
Q Consensus 116 ~~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~--~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~--g~~~i~ 191 (400)
..+.+.+.+.+.++.+.|..-|.+.|+-+.-. ..+..+++.+++..++ .++|.|- -.+.++.-+++ |.. +.
T Consensus 30 ~~~~~~a~~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~~-pisIDT~---~~~v~~aal~a~~Ga~-iI 104 (271)
T 2yci_X 30 NKDPRPIQEWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVDL-PCCLDST---NPDAIEAGLKVHRGHA-MI 104 (271)
T ss_dssp TTCCHHHHHHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHCCC-CEEEECS---CHHHHHHHHHHCCSCC-EE
T ss_pred hCCHHHHHHHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhCCC-eEEEeCC---CHHHHHHHHHhCCCCC-EE
Confidence 35668888888888899988888877554331 2367788888775566 6888875 23455665666 774 44
Q ss_pred EecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecC--CC----hhHHHHHHHHHHhCCCeEEEEeeec
Q 015786 192 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRG--FN----DDEICDFVELTRDRPINIRFIEFMP 265 (400)
Q Consensus 192 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~--~n----~~el~~l~~~~~~~gv~~~~~~~~p 265 (400)
-|+.+. .+. |+.+ +..+.++|. ++.+...-.+| .+ .+.+.+.++.+.+.|+.-.-+-+-|
T Consensus 105 Ndvs~~-~d~---------~~~~---~~~~a~~~~-~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~IilDP 170 (271)
T 2yci_X 105 NSTSAD-QWK---------MDIF---FPMAKKYEA-AIIGLTMNEKGVPKDANDRSQLAMELVANADAHGIPMTELYIDP 170 (271)
T ss_dssp EEECSC-HHH---------HHHH---HHHHHHHTC-EEEEESCBTTBCCCSHHHHHHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred EECCCC-ccc---------cHHH---HHHHHHcCC-CEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEec
Confidence 455553 121 2333 445567777 66555431122 24 3456777778888888632333344
No 117
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=58.61 E-value=52 Score=30.32 Aligned_cols=84 Identities=20% Similarity=0.243 Sum_probs=56.6
Q ss_pred CCCCCCHHHHHHHHHHHH-------hCCCCEEEEECCC---------ccch-------------hh-HHHHHHHhhhcCC
Q 015786 113 KPQLLSLNEILRLAYLFV-------TSGVDKIRLTGGE---------PTVR-------------KD-IEEACFHLSKLKG 162 (400)
Q Consensus 113 ~~~~~s~e~i~~ii~~~~-------~~g~~~i~~~GGE---------Pll~-------------~~-l~~~i~~~~~~~g 162 (400)
..+.||.++|.++++.+. +.|.+.|.+.++. |..+ .. +.++++.+++.-|
T Consensus 138 ~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG 217 (349)
T 3hgj_A 138 VPEPLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVP 217 (349)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSC
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhc
Confidence 356799999999988653 4789999999877 6643 12 3678888876543
Q ss_pred --C-ceEEEEec-----Ccchhh---hHHHHHHcCCCeEEEecCC
Q 015786 163 --L-KTLAMTTN-----GLTLAR---KLPKLKESGLTSVNISLDT 196 (400)
Q Consensus 163 --~-~~~~i~TN-----G~ll~~---~~~~l~~~g~~~i~iSldg 196 (400)
+ ..+.+..+ |..+++ .++.|.+.|++.|.+|.-+
T Consensus 218 ~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~ 262 (349)
T 3hgj_A 218 RELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGG 262 (349)
T ss_dssp TTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCC
Confidence 2 13444443 434432 3467778899999999633
No 118
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=58.39 E-value=30 Score=32.22 Aligned_cols=83 Identities=14% Similarity=0.205 Sum_probs=53.9
Q ss_pred CCCCCCHHHHHHHHHHHH-------hCCCCEEEEECCC---------ccchh-------------h-HHHHHHHhhhcCC
Q 015786 113 KPQLLSLNEILRLAYLFV-------TSGVDKIRLTGGE---------PTVRK-------------D-IEEACFHLSKLKG 162 (400)
Q Consensus 113 ~~~~~s~e~i~~ii~~~~-------~~g~~~i~~~GGE---------Pll~~-------------~-l~~~i~~~~~~~g 162 (400)
..+.|+.++|.++++.+. +.|.+.|.+.||. |..+. . +.++++.+++.-+
T Consensus 147 ~pr~mt~~eI~~ii~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg 226 (361)
T 3gka_A 147 TPRALELDEIPGVVAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWS 226 (361)
T ss_dssp CCEECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHC
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcC
Confidence 356799999999887663 4799999999886 76432 2 3678888776433
Q ss_pred Cc--eEEEEec----Cc----chh---hhHHHHHHcCCCeEEEecC
Q 015786 163 LK--TLAMTTN----GL----TLA---RKLPKLKESGLTSVNISLD 195 (400)
Q Consensus 163 ~~--~~~i~TN----G~----ll~---~~~~~l~~~g~~~i~iSld 195 (400)
-. .+.|..+ |. ..+ +.++.|.+.|++.|.+|--
T Consensus 227 ~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~ 272 (361)
T 3gka_A 227 AARVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARES 272 (361)
T ss_dssp GGGEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCeEEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCC
Confidence 21 3344332 11 121 2346677889999999853
No 119
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=58.35 E-value=1.1e+02 Score=27.79 Aligned_cols=78 Identities=22% Similarity=0.243 Sum_probs=50.9
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEEC--CCccch---------hh---HHHHHHHhhhcCCCceEEEEecCcchhhhHH
Q 015786 115 QLLSLNEILRLAYLFVTSGVDKIRLTG--GEPTVR---------KD---IEEACFHLSKLKGLKTLAMTTNGLTLARKLP 180 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g~~~i~~~G--GEPll~---------~~---l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~ 180 (400)
...+.+.+.+.+.++.+.|..-|.+.| +.|-.. .+ +..+++.+++..++ .++|.|-= .+.++
T Consensus 44 ~~~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~v-pISIDT~~---~~Va~ 119 (314)
T 3tr9_A 44 PHLDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQ-LISVDTSR---PRVMR 119 (314)
T ss_dssp BCCSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCS-EEEEECSC---HHHHH
T ss_pred ccCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCC-eEEEeCCC---HHHHH
Confidence 557899999999999999988888766 444321 12 45667777665566 78888732 24445
Q ss_pred HHHHcCCCeEEEecCCC
Q 015786 181 KLKESGLTSVNISLDTL 197 (400)
Q Consensus 181 ~l~~~g~~~i~iSldg~ 197 (400)
.-+++|.+ +.=|+.|.
T Consensus 120 aAl~aGa~-iINDVsg~ 135 (314)
T 3tr9_A 120 EAVNTGAD-MINDQRAL 135 (314)
T ss_dssp HHHHHTCC-EEEETTTT
T ss_pred HHHHcCCC-EEEECCCC
Confidence 55555764 55566663
No 120
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=57.30 E-value=1.1e+02 Score=27.57 Aligned_cols=118 Identities=12% Similarity=0.129 Sum_probs=65.3
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccch-----hhHHHHHHHhhhcCCCceEEEEecC------cchhhhHHHHH--
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVR-----KDIEEACFHLSKLKGLKTLAMTTNG------LTLARKLPKLK-- 183 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~-----~~l~~~i~~~~~~~g~~~~~i~TNG------~ll~~~~~~l~-- 183 (400)
.+.+++...+..+.+.|+++|....|+|--. .+-.++++.+++..++ .+.+..+. ..++..+..|+
T Consensus 94 ~~~~~l~~~L~~~~~~GI~nILaLrGDpp~~~~~~~~~A~dLv~~ir~~~~f-~IgvA~yPE~Hp~a~~~~~d~~~Lk~K 172 (304)
T 3fst_A 94 ATPDELRTIARDYWNNGIRHIVALRGDLPPGSGKPEMYASDLVTLLKEVADF-DISVAAYPEVHPEAKSAQADLLNLKRK 172 (304)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECCCCC------CCCHHHHHHHHHHHCCC-EEEEEECTTCCTTCSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCCCCCCCCCCHHHHHHHHHHcCCC-eEEEEeCCCcCCCCCCHHHHHHHHHHH
Confidence 5788999999999999999998888776432 1245677777665455 45555432 11222333333
Q ss_pred -HcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHH
Q 015786 184 -ESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVE 249 (400)
Q Consensus 184 -~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~ 249 (400)
++|.+. .|+--.++.+. +.+-++.+++.|+ .+-|-.-+++=.|...+..+.+
T Consensus 173 vdAGAdf-~iTQ~ffD~~~------------~~~f~~~~r~~Gi-~vPIi~GImPi~s~~~~~~~~~ 225 (304)
T 3fst_A 173 VDAGANR-AITQFFFDVES------------YLRFRDRCVSAGI-DVEIIPGILPVSNFKQAKKLAD 225 (304)
T ss_dssp HHHTCCE-EEECCCSCHHH------------HHHHHHHHHHTTC-CSCEECEECCCSCHHHHHHHHH
T ss_pred HHcCCCE-EEeCccCCHHH------------HHHHHHHHHhcCC-CCcEEEEecccCCHHHHHHHHH
Confidence 456643 44444444333 3334455566666 4444444444235555555543
No 121
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=56.48 E-value=88 Score=29.21 Aligned_cols=116 Identities=11% Similarity=0.152 Sum_probs=55.4
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEE---C-CCccchhhHHHHHHHhhhc--CCCceEEEEe---cCcchhhhHHHHHHcCCC
Q 015786 118 SLNEILRLAYLFVTSGVDKIRLT---G-GEPTVRKDIEEACFHLSKL--KGLKTLAMTT---NGLTLARKLPKLKESGLT 188 (400)
Q Consensus 118 s~e~i~~ii~~~~~~g~~~i~~~---G-GEPll~~~l~~~i~~~~~~--~g~~~~~i~T---NG~ll~~~~~~l~~~g~~ 188 (400)
+++.+.++++.+.+. ...|.|- | +-|. ++.++++.+++. .++ .+.+.+ -|.-+.. ...-.++|.+
T Consensus 143 ~~~~~~~~~~~~~~~-a~~i~l~DT~G~~~P~---~~~~lv~~l~~~~~~~~-~i~~H~Hnd~GlAvAN-~laAv~aGa~ 216 (382)
T 2ztj_A 143 EEQDLLAVYEAVAPY-VDRVGLADTVGVATPR---QVYALVREVRRVVGPRV-DIEFHGHNDTGCAIAN-AYEAIEAGAT 216 (382)
T ss_dssp CHHHHHHHHHHHGGG-CSEEEEEETTSCCCHH---HHHHHHHHHHHHHTTTS-EEEEEEBCTTSCHHHH-HHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHh-cCEEEecCCCCCCCHH---HHHHHHHHHHHhcCCCC-eEEEEeCCCccHHHHH-HHHHHHhCCC
Confidence 455666666666555 5566653 2 2221 234444444443 333 344443 2222222 2222345666
Q ss_pred eEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHh
Q 015786 189 SVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRD 253 (400)
Q Consensus 189 ~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~ 253 (400)
.|..|+.|..+ -.|....+.++.++..+...|+ ..+.+.+.+.++.+++.+
T Consensus 217 ~vd~tv~GlGe-----raGN~~lE~vv~~L~~~~~~g~---------~t~idl~~L~~~s~~v~~ 267 (382)
T 2ztj_A 217 HVDTTILGIGE-----RNGITPLGGFLARMYTLQPEYV---------RRKYKLEMLPELDRMVAR 267 (382)
T ss_dssp EEEEBGGGCSS-----TTCBCBHHHHHHHHHHHCHHHH---------HHHSCGGGHHHHHHHHHH
T ss_pred EEEEccccccc-----cccchhHHHHHHHHHhhcCCcc---------cCCCCHHHHHHHHHHHHH
Confidence 77777776543 1222237777777665533322 112455555555555544
No 122
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1
Probab=56.17 E-value=29 Score=30.94 Aligned_cols=55 Identities=18% Similarity=0.185 Sum_probs=41.5
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecC
Q 015786 116 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNG 172 (400)
Q Consensus 116 ~~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG 172 (400)
....+++.+.+.+..+.|-..+.+.+|+|+++--..++++.+.+. |+ .+.+.-.-
T Consensus 75 ~~~~~~i~~~l~~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~-gi-~veviPGi 129 (280)
T 1s4d_A 75 SPKQRDISLRLVELARAGNRVLRLKGGDPFVFGRGGEEALTLVEH-QV-PFRIVPGI 129 (280)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEESBCTTSSSSHHHHHHHHHTT-TC-CEEEECCC
T ss_pred ccCHHHHHHHHHHHHhCCCeEEEEcCCCCccccCHHHHHHHHHHC-CC-CEEEEcCc
Confidence 356778777666666667778888999999987777888888874 77 67776543
No 123
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=56.13 E-value=56 Score=29.93 Aligned_cols=83 Identities=18% Similarity=0.244 Sum_probs=53.9
Q ss_pred CCCCCCHHHHHHHHHHH-------HhCCCCEEEEECCC---------ccch-------------hh-HHHHHHHhhhcCC
Q 015786 113 KPQLLSLNEILRLAYLF-------VTSGVDKIRLTGGE---------PTVR-------------KD-IEEACFHLSKLKG 162 (400)
Q Consensus 113 ~~~~~s~e~i~~ii~~~-------~~~g~~~i~~~GGE---------Pll~-------------~~-l~~~i~~~~~~~g 162 (400)
..+.|+.++|.++++.+ .+.|.+.|.+.+|. |..+ .. +.++++.+++.-.
T Consensus 130 ~p~~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~ 209 (338)
T 1z41_A 130 TPVEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWD 209 (338)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCC
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcC
Confidence 35679999998887755 35789999998875 5432 22 3678888776433
Q ss_pred Cc-eEEEEec-----Ccchh---hhHHHHHHcCCCeEEEecC
Q 015786 163 LK-TLAMTTN-----GLTLA---RKLPKLKESGLTSVNISLD 195 (400)
Q Consensus 163 ~~-~~~i~TN-----G~ll~---~~~~~l~~~g~~~i~iSld 195 (400)
+. .+.|..+ |...+ +.+..|.+.|++.|.+|--
T Consensus 210 ~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~ 251 (338)
T 1z41_A 210 GPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSG 251 (338)
T ss_dssp SCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecC
Confidence 31 3444443 33332 3346777889999999853
No 124
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=55.49 E-value=1.4e+02 Score=30.53 Aligned_cols=118 Identities=14% Similarity=0.173 Sum_probs=73.4
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhh-HHHHHHHhhhcC-CCceEEEEec---CcchhhhHHHHHHcCCCeEE
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKD-IEEACFHLSKLK-GLKTLAMTTN---GLTLARKLPKLKESGLTSVN 191 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~-l~~~i~~~~~~~-g~~~~~i~TN---G~ll~~~~~~l~~~g~~~i~ 191 (400)
.+.+.+.++++.+.+.|...|.|----=++.|. +.++++.+++.- ++ .+.+.+. |.-+ -....-.++|.+.|.
T Consensus 258 ~~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~~P~~v~~lV~~lk~~~p~~-~I~~H~Hnd~GlAv-ANslaAveAGa~~VD 335 (718)
T 3bg3_A 258 YSLQYYMGLAEELVRAGTHILCIKDMAGLLKPTACTMLVSSLRDRFPDL-PLHIHTHDTSGAGV-AAMLACAQAGADVVD 335 (718)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEECTTSCCCHHHHHHHHHHHHHHSTTC-CEEEECCCTTSCHH-HHHHHHHHTTCSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCcCCCcCHHHHHHHHHHHHHhCCCC-eEEEEECCCccHHH-HHHHHHHHhCCCEEE
Confidence 578888888888888888888886311123333 567777776543 45 5677662 3222 223344467899999
Q ss_pred EecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHh
Q 015786 192 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRD 253 (400)
Q Consensus 192 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~ 253 (400)
.|+.|.... .|....+.++.+++. .|+ . .+.+.+.|.++.+++.+
T Consensus 336 ~ti~GlGer-----tGN~~lE~vv~~L~~---~g~-~--------tgidl~~L~~~s~~v~~ 380 (718)
T 3bg3_A 336 VAADSMSGM-----TSQPSMGALVACTRG---TPL-D--------TEVPMERVFDYSEYWEG 380 (718)
T ss_dssp EBCGGGCST-----TSCCBHHHHHHHHTT---STT-C--------CCCCHHHHHHHHHHHHH
T ss_pred ecCcccccc-----cCchhHHHHHHHHHh---cCC-C--------cccCHHHHHHHHHHHHH
Confidence 999986541 233337777777665 355 2 24667777666666654
No 125
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=55.23 E-value=39 Score=31.67 Aligned_cols=139 Identities=10% Similarity=0.061 Sum_probs=82.5
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEE--C--CCc-cchhhHHHHHHHhhhcCCCceEEEEecCcchh------hhHHHHHHc
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLT--G--GEP-TVRKDIEEACFHLSKLKGLKTLAMTTNGLTLA------RKLPKLKES 185 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~--G--GEP-ll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~------~~~~~l~~~ 185 (400)
-+.++..+.++.+.+.|...|.-+ . +++ .....|.++++++++. |+ .+.+..|...+. +.+..|.+.
T Consensus 38 ~~~~~~~~Yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~-g~-~vi~DVsp~~~~~Lg~s~~dl~~f~~l 115 (385)
T 1x7f_A 38 STKEKDMAYISAAARHGFSRIFTCLLSVNRPKEEIVAEFKEIINHAKDN-NM-EVILDVAPAVFDQLGISYSDLSFFAEL 115 (385)
T ss_dssp SCHHHHHHHHHHHHTTTEEEEEEEECCC--------HHHHHHHHHHHHT-TC-EEEEEECTTCC------CCCTHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHC-CC-EEEEECCHHHHHHcCCCHHHHHHHHHc
Confidence 357788899999999997665432 2 333 3446689999999985 98 799999998774 356788888
Q ss_pred CCCeEEEecCCCCHHHHHHhhcCC-C------HHHHHHHHHHHHHcCCC--cEEEEEEEec----CCChhHHHHHHHHHH
Q 015786 186 GLTSVNISLDTLVPAKFEFLTRRK-G------HEKVMESINAAIEVGYN--PVKVNCVVMR----GFNDDEICDFVELTR 252 (400)
Q Consensus 186 g~~~i~iSldg~~~~~~~~ir~~~-~------~~~v~~~i~~l~~~g~~--~v~i~~~v~~----~~n~~el~~l~~~~~ 252 (400)
|++.|.+. +|++.+.-..+.... + -....+-++.+.+.|.+ .+..-..+.| |...+.+.+--++++
T Consensus 116 Gi~gLRLD-~Gf~~~eia~ls~n~~glkIeLNASt~~~~l~~l~~~~~n~~~l~acHNFYPr~~TGLs~~~f~~~n~~~k 194 (385)
T 1x7f_A 116 GADGIRLD-VGFDGLTEAKMTNNPYGLKIELNVSNDIAYLENILSHQANKSALIGCHNFYPQKFTGLPYDYFIRCSERFK 194 (385)
T ss_dssp TCSEEEES-SCCSSHHHHHHTTCTTCCEEEEETTSCSSHHHHHTTSSCCGGGEEEECCCBCSTTCSBCHHHHHHHHHHHH
T ss_pred CCCEEEEc-CCCCHHHHHHHhcCCCCCEEEEeCcCCHHHHHHHHHcCCChHHeEEeeccCCCCCCCCCHHHHHHHHHHHH
Confidence 99888877 344444333343321 0 00123344555555541 1222222222 345566777777777
Q ss_pred hCCCeE
Q 015786 253 DRPINI 258 (400)
Q Consensus 253 ~~gv~~ 258 (400)
+.|+.+
T Consensus 195 ~~Gi~t 200 (385)
T 1x7f_A 195 KHGIRS 200 (385)
T ss_dssp HTTCCC
T ss_pred HCCCcE
Confidence 777643
No 126
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=55.01 E-value=87 Score=29.76 Aligned_cols=15 Identities=7% Similarity=0.244 Sum_probs=9.7
Q ss_pred cCCCHHHHHHHHHHH
Q 015786 359 QNASDDELREIIGAA 373 (400)
Q Consensus 359 ~~~~~~~l~ei~~~a 373 (400)
..+.+++|..|+...
T Consensus 393 ~~~~~~el~~i~~~~ 407 (423)
T 3ivs_A 393 RTLAMDDVDRVLREY 407 (423)
T ss_dssp CCCCTTHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHH
Confidence 356677777777543
No 127
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=54.78 E-value=44 Score=25.22 Aligned_cols=46 Identities=17% Similarity=0.226 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhCCCCEEEEE-CCCccchhhHHHHHHHhhhcCCCceEEE
Q 015786 120 NEILRLAYLFVTSGVDKIRLT-GGEPTVRKDIEEACFHLSKLKGLKTLAM 168 (400)
Q Consensus 120 e~i~~ii~~~~~~g~~~i~~~-GGEPll~~~l~~~i~~~~~~~g~~~~~i 168 (400)
+....+++.+ ..|-..+.++ +|.|++.--..++++.+.+. ++ .+.+
T Consensus 67 ~~~~~i~~~~-~~G~~V~~l~d~GdP~i~~~~~~l~~~~~~~-gi-~v~v 113 (117)
T 3hh1_A 67 RAVRQVIELL-EEGSDVALVTDAGTPAISDPGYTMASAAHAA-GL-PVVP 113 (117)
T ss_dssp HHHHHHHHHH-HTTCCEEEEEETTSCGGGSTTHHHHHHHHHT-TC-CEEE
T ss_pred HHHHHHHHHH-HCCCeEEEEecCCcCeEeccHHHHHHHHHHC-CC-cEEE
Confidence 3444455554 4566677888 89999987778888888874 77 5554
No 128
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=54.47 E-value=1.2e+02 Score=27.28 Aligned_cols=44 Identities=23% Similarity=0.284 Sum_probs=32.7
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccch-----------hhHHHHHHHhhhc
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVR-----------KDIEEACFHLSKL 160 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~-----------~~l~~~i~~~~~~ 160 (400)
.+.+++...+..+.+.|+++|....|+|--. .+-.++++.+++.
T Consensus 83 ~~~~~l~~~L~~~~~~GI~niLaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~ 137 (310)
T 3apt_A 83 QSRKEVAEVLHRFVESGVENLLALRGDPPRGERVFRPHPEGFRYAAELVALIRER 137 (310)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHh
Confidence 6899999999999999999998887776321 1345666666654
No 129
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=54.18 E-value=58 Score=29.79 Aligned_cols=74 Identities=16% Similarity=0.201 Sum_probs=37.8
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCc--c---chhh-HHHHHHHhhhcCCCceEEEEecCcch-hhhHHHHHHcC-CC
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEP--T---VRKD-IEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LT 188 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEP--l---l~~~-l~~~i~~~~~~~g~~~~~i~TNG~ll-~~~~~~l~~~g-~~ 188 (400)
++.++...+++.+.+.|+..|.+++|-. . ..+. ..++++.+++..++ -|..||-+. .+.+..+++.| .+
T Consensus 226 ~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~i---PVi~~Ggi~s~~~a~~~l~~G~aD 302 (338)
T 1z41_A 226 LDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADM---ATGAVGMITDGSMAEEILQNGRAD 302 (338)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCC---EEEECSSCCSHHHHHHHHHTTSCS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCC---CEEEECCCCCHHHHHHHHHcCCce
Confidence 4566666666666666766666666421 0 1111 23444445443222 344555443 35556666655 66
Q ss_pred eEEEe
Q 015786 189 SVNIS 193 (400)
Q Consensus 189 ~i~iS 193 (400)
.|.+.
T Consensus 303 ~V~iG 307 (338)
T 1z41_A 303 LIFIG 307 (338)
T ss_dssp EEEEC
T ss_pred EEeec
Confidence 66654
No 130
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=54.17 E-value=1.2e+02 Score=27.04 Aligned_cols=121 Identities=16% Similarity=0.170 Sum_probs=77.2
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEC--CCccchhh-HHHHHHHhhhcC-CCceEEEEe---cCcchhhhHHHHHHcCCCe
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTG--GEPTVRKD-IEEACFHLSKLK-GLKTLAMTT---NGLTLARKLPKLKESGLTS 189 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~G--GEPll~~~-l~~~i~~~~~~~-g~~~~~i~T---NG~ll~~~~~~l~~~g~~~ 189 (400)
.+.+.+.++++.+.+.|+..|.|.- | .+.|. +.++++.+++.. ++ .+.+.+ -|.-+.. ...-.++|.+.
T Consensus 153 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G--~~~P~~~~~lv~~l~~~~~~~-~i~~H~Hn~~Gla~An-~laA~~aGa~~ 228 (298)
T 2cw6_A 153 ISPAKVAEVTKKFYSMGCYEISLGDTIG--VGTPGIMKDMLSAVMQEVPLA-ALAVHCHDTYGQALAN-TLMALQMGVSV 228 (298)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEETTS--CCCHHHHHHHHHHHHHHSCGG-GEEEEEBCTTSCHHHH-HHHHHHTTCCE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCC--CcCHHHHHHHHHHHHHhCCCC-eEEEEECCCCchHHHH-HHHHHHhCCCE
Confidence 5788999999999999999888862 3 23343 677777776543 33 566665 2332322 33345678999
Q ss_pred EEEecCCCCHHHHHHh-hcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHh
Q 015786 190 VNISLDTLVPAKFEFL-TRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRD 253 (400)
Q Consensus 190 i~iSldg~~~~~~~~i-r~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~ 253 (400)
|..|+.|..+--|..- .|.-..+.++..++. .|+ . .+.+.+.+.++.+++.+
T Consensus 229 vd~tv~GlG~cp~a~g~aGN~~~E~lv~~l~~---~g~-~--------~~idl~~l~~~~~~~~~ 281 (298)
T 2cw6_A 229 VDSSVAGLGGCPYAQGASGNLATEDLVYMLEG---LGI-H--------TGVNLQKLLEAGNFICQ 281 (298)
T ss_dssp EEEBTTSCCCCTTSCSSCCBCBHHHHHHHHHH---HTC-B--------CCCCHHHHHHHHHHHHH
T ss_pred EEeecccccCCCCCCCCcCChhHHHHHHHHHh---cCC-C--------CCcCHHHHHHHHHHHHH
Confidence 9999998754222211 122227788777764 466 2 25678888888887776
No 131
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=53.51 E-value=87 Score=28.51 Aligned_cols=141 Identities=11% Similarity=0.165 Sum_probs=74.0
Q ss_pred CCHHHHHHHHHHHHhCCCCEEE---EECCCccchhhHHHHHHHhhhc--CCC--ceEEEEecCcc-------hhhhH-HH
Q 015786 117 LSLNEILRLAYLFVTSGVDKIR---LTGGEPTVRKDIEEACFHLSKL--KGL--KTLAMTTNGLT-------LARKL-PK 181 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~---~~GGEPll~~~l~~~i~~~~~~--~g~--~~~~i~TNG~l-------l~~~~-~~ 181 (400)
++.++..++++.+.+.|+..|. ++|-|.. +-+.++...+. .++ ..+.|+|-... +.+.+ ..
T Consensus 35 ~~~~~~~~~v~~Al~~Gi~~~DTA~~YgsE~~----vG~al~~~~~~~~~g~~R~~v~I~TK~~~~~~~~~~v~~~~e~S 110 (334)
T 3krb_A 35 APPEAVQTAVETALMTGYRHIDCAYVYQNEEA----IGRAFGKIFKDASSGIKREDVWITSKLWNYNHRPELVREQCKKT 110 (334)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEECCGGGSCHHH----HHHHHHHHHHCTTSSCCGGGCEEEEEECGGGCSGGGHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEECcccccCHHH----HHHHHHHHhhhccCCCChhhEEEEeeeCCCCCCHHHHHHHHHHH
Confidence 4678889999998899987766 4564433 33444322111 011 24677775322 12233 44
Q ss_pred HHHcCCCeEEEec-CCCCHHH------H---H----HhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHH
Q 015786 182 LKESGLTSVNISL-DTLVPAK------F---E----FLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDF 247 (400)
Q Consensus 182 l~~~g~~~i~iSl-dg~~~~~------~---~----~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l 247 (400)
|...|.++|-+=+ ..+.+.. + + .....-.++.++++++.|++.|. |+.+=..+++.+++.++
T Consensus 111 L~rLg~dyiDl~llH~p~~~~~~~~~~~~~~d~~g~~~~~~~~~~e~~~al~~l~~~Gk----ir~iGvSn~~~~~l~~~ 186 (334)
T 3krb_A 111 MSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLEKVPLADTWRAMEQLVEEGL----VKHIGVSNYTVPLLADL 186 (334)
T ss_dssp HHHHTCSCEEEEEECCSCCBCCCTTCCSSCBCTTSCBCBCCCCHHHHHHHHHHHHHHTS----EEEEEEESCCHHHHHHH
T ss_pred HHHcCCCceeEEEEccccccccccccccCcccccccccccCCCHHHHHHHHHHHHHcCC----ccEEEEecCCHHHHHHH
Confidence 5566766655432 2111000 0 0 00011247899999999999987 23322224666777776
Q ss_pred HHHHHhCCCeEEEEeeecC
Q 015786 248 VELTRDRPINIRFIEFMPF 266 (400)
Q Consensus 248 ~~~~~~~gv~~~~~~~~p~ 266 (400)
++... ....+..+++.|+
T Consensus 187 ~~~~~-~~~~~~Q~~~~~~ 204 (334)
T 3krb_A 187 LNYAK-IKPLVNQIEIHPW 204 (334)
T ss_dssp HHHCS-SCCSEEEEECBTT
T ss_pred HHhCC-CceEEeeeecCcc
Confidence 66542 1233444555554
No 132
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=53.38 E-value=88 Score=25.28 Aligned_cols=91 Identities=16% Similarity=0.157 Sum_probs=53.0
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEEC-CCccchhhHHHHHHHhhhcCCCceEEEEe-cCcchhhhHHHHHHcCCCeEEEe
Q 015786 116 LLSLNEILRLAYLFVTSGVDKIRLTG-GEPTVRKDIEEACFHLSKLKGLKTLAMTT-NGLTLARKLPKLKESGLTSVNIS 193 (400)
Q Consensus 116 ~~s~e~i~~ii~~~~~~g~~~i~~~G-GEPll~~~l~~~i~~~~~~~g~~~~~i~T-NG~ll~~~~~~l~~~g~~~i~iS 193 (400)
.++.+++.++++.+.+.+ .|.+.| |-...-- ..+...+.. .|. .+...+ ++..+...+..+ ..+--.|.||
T Consensus 23 ~l~~~~l~~~~~~i~~a~--~I~i~G~G~S~~~a--~~~~~~l~~-~g~-~~~~~~~~~~~~~~~~~~~-~~~d~~i~iS 95 (187)
T 3sho_A 23 QTQPEAIEAAVEAICRAD--HVIVVGMGFSAAVA--VFLGHGLNS-LGI-RTTVLTEGGSTLTITLANL-RPTDLMIGVS 95 (187)
T ss_dssp TCCHHHHHHHHHHHHHCS--EEEEECCGGGHHHH--HHHHHHHHH-TTC-CEEEECCCTHHHHHHHHTC-CTTEEEEEEC
T ss_pred hCCHHHHHHHHHHHHhCC--EEEEEecCchHHHH--HHHHHHHHh-cCC-CEEEecCCchhHHHHHhcC-CCCCEEEEEe
Confidence 467888888888887764 899998 6543221 222233333 365 455555 443332222211 1122257778
Q ss_pred cCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCC
Q 015786 194 LDTLVPAKFEFLTRRKGHEKVMESINAAIEVGY 226 (400)
Q Consensus 194 ldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~ 226 (400)
..|.+ ..+++.++.+++.|.
T Consensus 96 ~sG~t-------------~~~~~~~~~ak~~g~ 115 (187)
T 3sho_A 96 VWRYL-------------RDTVAALAGAAERGV 115 (187)
T ss_dssp CSSCC-------------HHHHHHHHHHHHTTC
T ss_pred CCCCC-------------HHHHHHHHHHHHCCC
Confidence 77743 457788889999998
No 133
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=52.93 E-value=4.4 Score=29.68 Aligned_cols=31 Identities=23% Similarity=0.392 Sum_probs=23.3
Q ss_pred CCCEEEEECCCccchhhHHHHHHHhhhcCCC
Q 015786 133 GVDKIRLTGGEPTVRKDIEEACFHLSKLKGL 163 (400)
Q Consensus 133 g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~ 163 (400)
.+..|.+..|+.+..|+..++.+++.+..|+
T Consensus 55 tVP~I~i~Dg~~l~~~~~~el~~~L~el~gL 85 (92)
T 2lqo_A 55 TVPTVKFADGSTLTNPSADEVKAKLVKIAGL 85 (92)
T ss_dssp CSCEEEETTSCEEESCCHHHHHHHHHHHHCC
T ss_pred EeCEEEEeCCEEEeCCCHHHHHHHHHHhcCC
Confidence 3677777669998888888887777776555
No 134
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=52.86 E-value=84 Score=26.93 Aligned_cols=112 Identities=14% Similarity=0.170 Sum_probs=63.4
Q ss_pred CCHHHHHHHHHHHHhCCCCE--EEEECCC--ccchhhHHHHHHHhhhc--CCC-ceEEEEecCcchhhhHHHHHHcCCCe
Q 015786 117 LSLNEILRLAYLFVTSGVDK--IRLTGGE--PTVRKDIEEACFHLSKL--KGL-KTLAMTTNGLTLARKLPKLKESGLTS 189 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~--i~~~GGE--Pll~~~l~~~i~~~~~~--~g~-~~~~i~TNG~ll~~~~~~l~~~g~~~ 189 (400)
.++..+.+.++.+.+.|... +.+.-|. |.+... .++++.+++. ..+ ..+.+-+|- ..+.++.+.++|.+.
T Consensus 14 ~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G-~~~v~~ir~~~~~~~~~dvhLmv~~--p~~~i~~~~~aGad~ 90 (228)
T 3ovp_A 14 SDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFG-HPVVESLRKQLGQDPFFDMHMMVSK--PEQWVKPMAVAGANQ 90 (228)
T ss_dssp SCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBC-HHHHHHHHHHHCSSSCEEEEEECSC--GGGGHHHHHHHTCSE
T ss_pred CCchhHHHHHHHHHHcCCCEEEEEecCCCcCcccccC-HHHHHHHHHhhCCCCcEEEEEEeCC--HHHHHHHHHHcCCCE
Confidence 34555666677777777664 4445455 434311 2344444433 122 144444432 245678899999999
Q ss_pred EEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHH
Q 015786 190 VNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFV 248 (400)
Q Consensus 190 i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~ 248 (400)
|+|..++.+ ...+.++.+++.|. .+++ .+.++...+.++++.
T Consensus 91 itvH~Ea~~--------------~~~~~i~~i~~~G~-k~gv--al~p~t~~e~l~~~l 132 (228)
T 3ovp_A 91 YTFHLEATE--------------NPGALIKDIRENGM-KVGL--AIKPGTSVEYLAPWA 132 (228)
T ss_dssp EEEEGGGCS--------------CHHHHHHHHHHTTC-EEEE--EECTTSCGGGTGGGG
T ss_pred EEEccCCch--------------hHHHHHHHHHHcCC-CEEE--EEcCCCCHHHHHHHh
Confidence 999876631 13445566678888 5544 466654555555444
No 135
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=51.69 E-value=1.4e+02 Score=29.39 Aligned_cols=114 Identities=18% Similarity=0.285 Sum_probs=70.0
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEE---C-CCccchhhHHHHHHHhhhcC--CCceEEEEe---cCcchhhhHHHHHHcCCC
Q 015786 118 SLNEILRLAYLFVTSGVDKIRLT---G-GEPTVRKDIEEACFHLSKLK--GLKTLAMTT---NGLTLARKLPKLKESGLT 188 (400)
Q Consensus 118 s~e~i~~ii~~~~~~g~~~i~~~---G-GEPll~~~l~~~i~~~~~~~--g~~~~~i~T---NG~ll~~~~~~l~~~g~~ 188 (400)
+.+.+.++++.+.+.|...|.|- | +-|. ++.++++.+++.- ++ .+.+.+ -|.-+.. ...-.++|++
T Consensus 173 ~~e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~---~v~~lv~~l~~~~p~~i-~I~~H~Hnd~GlAvAN-~laAveAGa~ 247 (539)
T 1rqb_A 173 TVEGYVKLAGQLLDMGADSIALKDMAALLKPQ---PAYDIIKAIKDTYGQKT-QINLHCHSTTGVTEVS-LMKAIEAGVD 247 (539)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTCCCCHH---HHHHHHHHHHHHHCTTC-CEEEEEBCTTSCHHHH-HHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCcCHH---HHHHHHHHHHHhcCCCc-eEEEEeCCCCChHHHH-HHHHHHhCCC
Confidence 78888888888888888888884 3 3332 2455666655432 44 566665 2333322 3334467888
Q ss_pred eEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHh
Q 015786 189 SVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRD 253 (400)
Q Consensus 189 ~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~ 253 (400)
.|..|+.|..+. .|....+.++.+++. .|+ . .|.+.+.|.++.+++.+
T Consensus 248 ~VD~ti~g~Ger-----tGN~~lE~lv~~L~~---~g~-----~----tgidl~~L~~is~~v~~ 295 (539)
T 1rqb_A 248 VVDTAISSMSLG-----PGHNPTESVAEMLEG---TGY-----T----TNLDYDRLHKIRDHFKA 295 (539)
T ss_dssp EEEEBCGGGCST-----TSBCBHHHHHHHTTT---SSE-----E----CCCCHHHHHHHHHHHHH
T ss_pred EEEEeccccCCC-----ccChhHHHHHHHHHh---cCC-----C----chhhHHHHHHHHHHHHH
Confidence 999998876431 333337777766654 343 1 14677777777776665
No 136
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=51.62 E-value=55 Score=28.82 Aligned_cols=77 Identities=17% Similarity=0.125 Sum_probs=49.9
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEECCCccc----h-------hhHHHHHHHhhhcCCCceEEEEecCcc-h--hhhHHHHH
Q 015786 118 SLNEILRLAYLFVTSGVDKIRLTGGEPTV----R-------KDIEEACFHLSKLKGLKTLAMTTNGLT-L--ARKLPKLK 183 (400)
Q Consensus 118 s~e~i~~ii~~~~~~g~~~i~~~GGEPll----~-------~~l~~~i~~~~~~~g~~~~~i~TNG~l-l--~~~~~~l~ 183 (400)
..+.+.+.++.+..+|...|.+.|+.+.. . ..+.++.+.+++. |+ .+.+.+-... + .+.+..++
T Consensus 106 ~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~-Gv-~l~lEn~~~~~~~~~~~~~~l~ 183 (295)
T 3cqj_A 106 GLEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRA-QV-TLAMEIMDYPLMNSISKALGYA 183 (295)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHH-TC-EEEEECCSSGGGCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEeeCCCcccCCHHHHHHHH
Confidence 35677888888889999999998865421 1 1144555555554 88 7888875532 2 24454444
Q ss_pred -HcCCCeEEEecCC
Q 015786 184 -ESGLTSVNISLDT 196 (400)
Q Consensus 184 -~~g~~~i~iSldg 196 (400)
+.+-..+.+.+|.
T Consensus 184 ~~v~~~~vg~~~D~ 197 (295)
T 3cqj_A 184 HYLNNPWFQLYPDI 197 (295)
T ss_dssp HHHCCTTEEEECBH
T ss_pred HhcCCCCeEEEecc
Confidence 3455679999887
No 137
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=51.46 E-value=1.2e+02 Score=26.35 Aligned_cols=45 Identities=18% Similarity=0.155 Sum_probs=28.6
Q ss_pred HHHHHHHHHhCCCCEEEEECCC-ccch-hhHHHHHHHhhhcCCCceEEE
Q 015786 122 ILRLAYLFVTSGVDKIRLTGGE-PTVR-KDIEEACFHLSKLKGLKTLAM 168 (400)
Q Consensus 122 i~~ii~~~~~~g~~~i~~~GGE-Pll~-~~l~~~i~~~~~~~g~~~~~i 168 (400)
+...++.+++.|...|.+.+.. |-+. .++.++.+.+++. |+ .+..
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~-gl-~i~~ 65 (294)
T 3vni_A 19 YKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGN-GI-TLTV 65 (294)
T ss_dssp HHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHT-TC-EEEE
T ss_pred HHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHc-CC-eEEE
Confidence 3445666668899999998754 2222 3366777777764 88 4544
No 138
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=50.87 E-value=1.5e+02 Score=27.13 Aligned_cols=136 Identities=17% Similarity=0.171 Sum_probs=77.5
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEE---ECCCccchhh-HHHHHHH-hhhcCCCceEEEEecCc-c--------------hh
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRL---TGGEPTVRKD-IEEACFH-LSKLKGLKTLAMTTNGL-T--------------LA 176 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~---~GGEPll~~~-l~~~i~~-~~~~~g~~~~~i~TNG~-l--------------l~ 176 (400)
.+.++..++++.+.+.|+..|.- +|.++-.... +-+.++. +... -..+.|+|-.. . +.
T Consensus 61 ~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~~--R~~v~I~TK~g~~~~~~~~~~~~s~~~i~ 138 (353)
T 3erp_A 61 TRVENSRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQEDFLPW--RDELIISTKAGYTMWDGPYGDWGSRKYLI 138 (353)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHTGGG--GGGCEEEEEESSCCSSSTTSSTTCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEChhhhCCCCChHHHHHHHHHHhhccCC--CCeEEEEeeeccCCCCCcccCCCCHHHHH
Confidence 67899999999999999877663 4532111111 3344442 1110 11456666531 0 11
Q ss_pred hhH-HHHHHcCCCeEEEecC-CCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhC
Q 015786 177 RKL-PKLKESGLTSVNISLD-TLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDR 254 (400)
Q Consensus 177 ~~~-~~l~~~g~~~i~iSld-g~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~ 254 (400)
+.+ ..|...|.++|-+=+= .+++. ..++.++++++.|++.|. |+.+=..+++.+++.++.+.+.+.
T Consensus 139 ~~~e~SL~rLg~dyiDl~~lH~p~~~--------~~~~e~~~aL~~l~~~Gk----ir~iGvSn~~~~~l~~~~~~~~~~ 206 (353)
T 3erp_A 139 ASLDQSLKRMGLEYVDIFYHHRPDPE--------TPLKETMKALDHLVRHGK----ALYVGISNYPADLARQAIDILEDL 206 (353)
T ss_dssp HHHHHHHHHHTCSCEEEEEECSCCTT--------SCHHHHHHHHHHHHHTTS----EEEEEEESCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEeEEEecCCCCC--------CCHHHHHHHHHHHHHCCC----ccEEEecCCCHHHHHHHHHHHHHc
Confidence 223 3455667776665432 22221 237889999999999987 333323346788888888887765
Q ss_pred CCeEE--EEeeecC
Q 015786 255 PINIR--FIEFMPF 266 (400)
Q Consensus 255 gv~~~--~~~~~p~ 266 (400)
++.+. .++|.++
T Consensus 207 ~~~~~~~Q~~~~~~ 220 (353)
T 3erp_A 207 GTPCLIHQPKYSLF 220 (353)
T ss_dssp TCCEEEEECBCBTT
T ss_pred CCCeEEeecccccc
Confidence 55433 3345444
No 139
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=50.59 E-value=1.3e+02 Score=26.47 Aligned_cols=122 Identities=8% Similarity=0.054 Sum_probs=67.5
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEE-EecCcchhhhHHHHHHcCCCeEEEecC
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAM-TTNGLTLARKLPKLKESGLTSVNISLD 195 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i-~TNG~ll~~~~~~l~~~g~~~i~iSld 195 (400)
.+.++ ++..+.+.|+..+.+.+..+... +-..+++.+++.++. .+.+ .-+.....+.++++.+.|+..|.+...
T Consensus 53 ~~~e~---~l~~~~~~GV~~~V~v~~~~~~~-~n~~~~~~~~~~p~r-~~g~~~v~P~~~~~eL~~l~~~gv~Gi~l~~~ 127 (294)
T 4i6k_A 53 ATVQS---FISHLDEHNFTHGVLVQPSFLGT-NNQAMLNAIQQYPDR-LKGIAVVQHTTTFNELVNLKAQGIVGVRLNLF 127 (294)
T ss_dssp BCHHH---HHHHHHHTTCCEEEEECCGGGTT-CCHHHHHHHHHSTTT-EEEEECCCTTCCHHHHHHHHTTTEEEEEEECT
T ss_pred CCHHH---HHHHHHHcCCCeEEEecCccccc-chHHHHHHHHHCCCe-EEEEEEeCCcccHHHHHHHHHCCCcEEEeccC
Confidence 44554 55566689999988887554221 112334444443332 2222 223322246677777777666665543
Q ss_pred CCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCCCe
Q 015786 196 TLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPIN 257 (400)
Q Consensus 196 g~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~ 257 (400)
+... ... .-+.....++.+.+.|. ++.+.+ ...++.++.+.+++.++.
T Consensus 128 ~~~~------~~~-~~~~~~~~~~~a~~~gl-pv~iH~------~~~~l~~~~~~l~~~p~~ 175 (294)
T 4i6k_A 128 GLNL------PAL-NTPDWQKFLRNVESLNW-QVELHA------PPKYLVQLLPQLNEYSFD 175 (294)
T ss_dssp TSCC------CCS-SSHHHHHHHHHHHHTTC-EEEEEC------CHHHHHHHHHHHTTSSSC
T ss_pred CCCC------CCc-ccHHHHHHHHHHHHcCC-EEEEee------CcchHHHHHHHHHHCCCC
Confidence 2110 000 12556677788888898 665442 235677888888877644
No 140
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=50.53 E-value=61 Score=26.26 Aligned_cols=28 Identities=18% Similarity=0.186 Sum_probs=22.7
Q ss_pred ccchhhHHHHHHHhhhcCCCceEEEEecCc
Q 015786 144 PTVRKDIEEACFHLSKLKGLKTLAMTTNGL 173 (400)
Q Consensus 144 Pll~~~l~~~i~~~~~~~g~~~~~i~TNG~ 173 (400)
..+.+.+.++++.+++. |+ .+.|.||+.
T Consensus 67 ~~~~~g~~e~L~~L~~~-G~-~v~ivT~~~ 94 (187)
T 2wm8_A 67 VRLYPEVPEVLKRLQSL-GV-PGAAASRTS 94 (187)
T ss_dssp ECCCTTHHHHHHHHHHH-TC-CEEEEECCS
T ss_pred cCcchhHHHHHHHHHHC-Cc-eEEEEeCCC
Confidence 34568899999999885 88 789999885
No 141
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=49.41 E-value=1.2e+02 Score=25.80 Aligned_cols=99 Identities=9% Similarity=0.154 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHhCCCCE--EEEECCC--ccchhhHHHHHHHhhhcCCCc-eEEEEecCcchhhhHHHHHHcCCCeEEEe
Q 015786 119 LNEILRLAYLFVTSGVDK--IRLTGGE--PTVRKDIEEACFHLSKLKGLK-TLAMTTNGLTLARKLPKLKESGLTSVNIS 193 (400)
Q Consensus 119 ~e~i~~ii~~~~~~g~~~--i~~~GGE--Pll~~~l~~~i~~~~~~~g~~-~~~i~TNG~ll~~~~~~l~~~g~~~i~iS 193 (400)
+..+.+.++.+.+.|+.. +.+..|. |.+... .++++.+++..... .+.+-+|= ..+.++.+.+.|.+.|.|.
T Consensus 16 ~~~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g-~~~v~~lr~~~~~~~~vhlmv~d--p~~~i~~~~~aGadgv~vh 92 (230)
T 1tqj_A 16 FSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIG-PLIVDAIRPLTKKTLDVHLMIVE--PEKYVEDFAKAGADIISVH 92 (230)
T ss_dssp GGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBC-HHHHHHHGGGCCSEEEEEEESSS--GGGTHHHHHHHTCSEEEEE
T ss_pred HhHHHHHHHHHHHcCCCEEEEEEEecCCCcchhhh-HHHHHHHHhhcCCcEEEEEEccC--HHHHHHHHHHcCCCEEEEC
Confidence 455666677777788775 4555676 444332 36777777653321 33344432 2456788899999999999
Q ss_pred cC--CCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEec
Q 015786 194 LD--TLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMR 237 (400)
Q Consensus 194 ld--g~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~ 237 (400)
.+ .. + ...+.++.+++.|. .+++. +.+
T Consensus 93 ~e~~~~-~-------------~~~~~~~~i~~~g~-~~gv~--~~p 121 (230)
T 1tqj_A 93 VEHNAS-P-------------HLHRTLCQIRELGK-KAGAV--LNP 121 (230)
T ss_dssp CSTTTC-T-------------THHHHHHHHHHTTC-EEEEE--ECT
T ss_pred cccccc-h-------------hHHHHHHHHHHcCC-cEEEE--EeC
Confidence 87 43 1 12345566778887 55554 455
No 142
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=47.67 E-value=1.5e+02 Score=26.92 Aligned_cols=60 Identities=12% Similarity=0.208 Sum_probs=35.4
Q ss_pred HhCCCCEEEEEC-CCccchhh---------HHHHHHHhhhcC---CCceEEEEecCcchhhhHHHHHHcCCCeEEE
Q 015786 130 VTSGVDKIRLTG-GEPTVRKD---------IEEACFHLSKLK---GLKTLAMTTNGLTLARKLPKLKESGLTSVNI 192 (400)
Q Consensus 130 ~~~g~~~i~~~G-GEPll~~~---------l~~~i~~~~~~~---g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~i 192 (400)
.+.|...|.+.- --.++.|+ +.++++.+++.. ++ .+...+.|. ...+..+.+.|++.+++
T Consensus 197 ~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~~~-~ii~~~~g~--~~~l~~l~~~g~d~i~~ 269 (354)
T 3cyv_A 197 IKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRV-PVTLFTKGG--GQWLEAMAETGCDALGL 269 (354)
T ss_dssp HHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHSCSEETTEEC-CEEEECTTT--TTTHHHHHTTSCSEEEC
T ss_pred HHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCC-CEEEECCCH--HHHHHHHHhcCCCEEEe
Confidence 356888887753 11255543 345666666531 35 344445553 45678888999987774
No 143
>1cbf_A Cobalt-precorrin-4 transmethylase; precorrin-4 methyltransferase, cobalamin biosynth methyltransferase; HET: SAH; 2.40A {Bacillus megaterium} SCOP: c.90.1.1 PDB: 2cbf_A*
Probab=47.59 E-value=36 Score=30.33 Aligned_cols=55 Identities=18% Similarity=0.289 Sum_probs=39.5
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCc
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGL 173 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ 173 (400)
++.+++.+.+.+..+.|-..+.+.+|+|+++--..++++.+.+. |+ .+.+.-.-+
T Consensus 77 ~~~~~~~~~i~~~~~~g~~Vv~L~~GDP~i~g~~~~l~~~l~~~-gi-~veviPGiS 131 (285)
T 1cbf_A 77 MHLEEMVGTMLDRMREGKMVVRVHTGDPAMYGAIMEQMVLLKRE-GV-DIEIVPGVT 131 (285)
T ss_dssp CCHHHHHHHHHHHHTTTCCEEEEESBCTTTTCCCHHHHHHHHHT-TC-EEEEECCCC
T ss_pred CCHHHHHHHHHHHHHCCCeEEEEeCCCccccccHHHHHHHHHHC-CC-cEEEECCch
Confidence 56677666665555566678888999999986677788888774 77 677765433
No 144
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=47.33 E-value=1.3e+02 Score=25.60 Aligned_cols=93 Identities=15% Similarity=0.146 Sum_probs=49.9
Q ss_pred hHHHHHHHhhhcCCCceEEEEecC------------cch-h---hhH-HHHHHcCCCeEEEecCCCCHHHHHHhhcCCCH
Q 015786 149 DIEEACFHLSKLKGLKTLAMTTNG------------LTL-A---RKL-PKLKESGLTSVNISLDTLVPAKFEFLTRRKGH 211 (400)
Q Consensus 149 ~l~~~i~~~~~~~g~~~~~i~TNG------------~ll-~---~~~-~~l~~~g~~~i~iSldg~~~~~~~~ir~~~~~ 211 (400)
++.+.++.+++. |+..+.+.... ..+ . +.+ ..+.+.|+....++... + ...
T Consensus 23 ~~~~~l~~~~~~-G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~-~----------~~~ 90 (262)
T 3p6l_A 23 PLTEALDKTQEL-GLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYV-A----------EKS 90 (262)
T ss_dssp CHHHHHHHHHHT-TCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEEC-C----------SST
T ss_pred CHHHHHHHHHHc-CCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccC-C----------ccH
Confidence 466777777764 66555554321 111 1 223 34445666544444432 1 123
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCCCeEE
Q 015786 212 EKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINIR 259 (400)
Q Consensus 212 ~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~~~ 259 (400)
+.+.+.|+.+.+.|. +.. ++.++ .+.+.++.+.+++.|+.+.
T Consensus 91 ~~~~~~i~~A~~lGa-~~v---~~~~~--~~~~~~l~~~a~~~gv~l~ 132 (262)
T 3p6l_A 91 SDWEKMFKFAKAMDL-EFI---TCEPA--LSDWDLVEKLSKQYNIKIS 132 (262)
T ss_dssp THHHHHHHHHHHTTC-SEE---EECCC--GGGHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHcCC-CEE---EecCC--HHHHHHHHHHHHHhCCEEE
Confidence 456667777777777 321 12232 4567777778877777543
No 145
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=46.21 E-value=1.4e+02 Score=27.32 Aligned_cols=59 Identities=14% Similarity=0.242 Sum_probs=32.1
Q ss_pred HhCCCCEEEEEC--CCccchhh---------HHHHHHHhhhcC-CCceEEEEecCcchhhhHHHHHHcCCCeEEE
Q 015786 130 VTSGVDKIRLTG--GEPTVRKD---------IEEACFHLSKLK-GLKTLAMTTNGLTLARKLPKLKESGLTSVNI 192 (400)
Q Consensus 130 ~~~g~~~i~~~G--GEPll~~~---------l~~~i~~~~~~~-g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~i 192 (400)
.+.|...|.+.- |. ++.++ +.++++.+++.. ++..+.+ +.|. ...+..+.+.|++.+.+
T Consensus 203 ~~aGad~iqi~D~~~~-~lsp~~f~ef~~p~~~~i~~~i~~~~~~~~~ih~-c~g~--~~~l~~l~~~g~d~~~~ 273 (353)
T 1j93_A 203 ADSGAQAVQIFDSWAT-ELSPVDFEEFSLPYLKQIVDSVKLTHPNLPLILY-ASGS--GGLLERLPLTGVDVVSL 273 (353)
T ss_dssp HHTTCSEEEEECGGGG-GSCHHHHHHHTHHHHHHHHHHHHHHSTTCCEEEE-CSSC--TTTGGGGGGGCCSEEEC
T ss_pred HHhCCCEEEEeCcccc-cCCHHHHHHHhHHHHHHHHHHHHHhCCCCCEEEE-CCCh--HHHHHHHHhcCCCEEEe
Confidence 357888777752 11 45443 346667776532 4533333 3332 23455666788886554
No 146
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=46.17 E-value=45 Score=31.18 Aligned_cols=83 Identities=16% Similarity=0.151 Sum_probs=52.0
Q ss_pred CCCCCCHHHHHHHHHHHH-------hCCCCEEEEECCC---------ccch-------------hh-HHHHHHHhhhcCC
Q 015786 113 KPQLLSLNEILRLAYLFV-------TSGVDKIRLTGGE---------PTVR-------------KD-IEEACFHLSKLKG 162 (400)
Q Consensus 113 ~~~~~s~e~i~~ii~~~~-------~~g~~~i~~~GGE---------Pll~-------------~~-l~~~i~~~~~~~g 162 (400)
..+.|+.++|..+++.+. +.|...|.|.||. |..+ .. +.++++.+++.-+
T Consensus 152 ~p~~mt~~eI~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg 231 (377)
T 2r14_A 152 TPRALETDEIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFG 231 (377)
T ss_dssp CCEECCGGGHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHC
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcC
Confidence 346689888888877653 4689999998875 5432 22 4677887776433
Q ss_pred C--ceEEEEecC--------cchh---hhHHHHHHcCCCeEEEecC
Q 015786 163 L--KTLAMTTNG--------LTLA---RKLPKLKESGLTSVNISLD 195 (400)
Q Consensus 163 ~--~~~~i~TNG--------~ll~---~~~~~l~~~g~~~i~iSld 195 (400)
- ..+.|..+. ...+ +.++.|.+.|++.|.+|--
T Consensus 232 ~~~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~ 277 (377)
T 2r14_A 232 PERVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEP 277 (377)
T ss_dssp GGGEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 1 133343321 1122 2346777889999999863
No 147
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=45.95 E-value=34 Score=27.44 Aligned_cols=27 Identities=19% Similarity=0.116 Sum_probs=22.2
Q ss_pred chhhHHHHHHHhhhcCCCceEEEEecCcc
Q 015786 146 VRKDIEEACFHLSKLKGLKTLAMTTNGLT 174 (400)
Q Consensus 146 l~~~l~~~i~~~~~~~g~~~~~i~TNG~l 174 (400)
+.|+..++++.+++. |+ .+.|.||+..
T Consensus 28 ~~~g~~~~l~~L~~~-g~-~~~i~Tn~~~ 54 (179)
T 3l8h_A 28 ALPGSLQAIARLTQA-DW-TVVLATNQSG 54 (179)
T ss_dssp BCTTHHHHHHHHHHT-TC-EEEEEEECTT
T ss_pred ECcCHHHHHHHHHHC-CC-EEEEEECCCc
Confidence 467889999999885 88 7899999864
No 148
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=45.64 E-value=2e+02 Score=31.22 Aligned_cols=118 Identities=17% Similarity=0.199 Sum_probs=73.0
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhh-HHHHHHHhhhcCCCceEEEEec---CcchhhhHHHHHHcCCCeEEE
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKD-IEEACFHLSKLKGLKTLAMTTN---GLTLARKLPKLKESGLTSVNI 192 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~-l~~~i~~~~~~~g~~~~~i~TN---G~ll~~~~~~l~~~g~~~i~i 192 (400)
.+.+.+.++++.+.+.|...|.|----=++.|. +.++++.+++..++ .+.+.|. |.-+. ....-.++|.+.|..
T Consensus 706 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~-~i~~H~Hnd~GlAvA-n~laAv~aGa~~vd~ 783 (1165)
T 2qf7_A 706 YDLKYYTNLAVELEKAGAHIIAVKDMAGLLKPAAAKVLFKALREATGL-PIHFHTHDTSGIAAA-TVLAAVEAGVDAVDA 783 (1165)
T ss_dssp GCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHCSS-CEEEEECBTTSCHHH-HHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCccCCcCHHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHH-HHHHHHHhCCCEEEe
Confidence 578888888888888998888885211123333 56667776654455 5677663 32232 233444678999999
Q ss_pred ecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHh
Q 015786 193 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRD 253 (400)
Q Consensus 193 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~ 253 (400)
++.|...- .|....+.++.+++. .|+ . .+.+.+.+.++.+++.+
T Consensus 784 ti~GlGe~-----~Gn~~le~vv~~L~~---~g~-~--------tgidl~~L~~~s~~~~~ 827 (1165)
T 2qf7_A 784 AMDALSGN-----TSQPCLGSIVEALSG---SER-D--------PGLDPAWIRRISFYWEA 827 (1165)
T ss_dssp BCGGGCSB-----TSCCBHHHHHHHHTT---STT-C--------CCCCHHHHHHHHHHHHH
T ss_pred cccccCCC-----ccchhHHHHHHHHHh---cCC-C--------ccccHHHHHHHHHHHHH
Confidence 99986532 232336777666654 355 2 24667777776666654
No 149
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=45.59 E-value=65 Score=27.92 Aligned_cols=78 Identities=15% Similarity=0.156 Sum_probs=49.8
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEECCCccc--h--------hhHHHHHHHhhhcCCCceEEEEe-c-----Ccch--hhhH
Q 015786 118 SLNEILRLAYLFVTSGVDKIRLTGGEPTV--R--------KDIEEACFHLSKLKGLKTLAMTT-N-----GLTL--ARKL 179 (400)
Q Consensus 118 s~e~i~~ii~~~~~~g~~~i~~~GGEPll--~--------~~l~~~i~~~~~~~g~~~~~i~T-N-----G~ll--~~~~ 179 (400)
..+.+.+.++.+..+|...|.+..|.|.- . ..+.++.+.+++ .|+ .+.+.+ | +..+ .+.+
T Consensus 91 ~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~l~~l~~~a~~-~Gv-~l~lE~~n~~~~~~~~~~~~~~~ 168 (269)
T 3ngf_A 91 FRDNVDIALHYALALDCRTLHAMSGITEGLDRKACEETFIENFRYAADKLAP-HGI-TVLVEPLNTRNMPGYFIVHQLEA 168 (269)
T ss_dssp HHHHHHHHHHHHHHTTCCEEECCBCBCTTSCHHHHHHHHHHHHHHHHHHHGG-GTC-EEEECCCCTTTSTTBSCCCHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHHHH-cCC-EEEEeeCCcccCccchhcCHHHH
Confidence 45678888888899999999986664421 1 113455555555 488 788886 4 3333 2445
Q ss_pred HHHH-HcCCCeEEEecCCC
Q 015786 180 PKLK-ESGLTSVNISLDTL 197 (400)
Q Consensus 180 ~~l~-~~g~~~i~iSldg~ 197 (400)
..++ +.+-..+.+.+|..
T Consensus 169 ~~l~~~v~~~~vg~~~D~~ 187 (269)
T 3ngf_A 169 VGLVKRVNRPNVAVQLDLY 187 (269)
T ss_dssp HHHHHHHCCTTEEEEEEHH
T ss_pred HHHHHHhCCCCCCeEEEhh
Confidence 4444 44556799998873
No 150
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=45.53 E-value=1.5e+02 Score=25.74 Aligned_cols=101 Identities=14% Similarity=0.067 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEe-------cCcch--h------------hh
Q 015786 120 NEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTT-------NGLTL--A------------RK 178 (400)
Q Consensus 120 e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~T-------NG~ll--~------------~~ 178 (400)
..+...++.+++.|...|.+.+..|. ..++.++.+.+++. |+....+.+ ...+. + +.
T Consensus 41 ~~~~~~l~~~~~~G~~~vEl~~~~~~-~~~~~~~~~~l~~~-gl~~~~~~~~~p~~~~~~~l~~~d~~~r~~~~~~~~~~ 118 (290)
T 2zvr_A 41 GDLRKGMELAKRVGYQAVEIAVRDPS-IVDWNEVKILSEEL-NLPICAIGTGQAYLADGLSLTHPNDEIRKKAIERVVKH 118 (290)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECSCGG-GSCHHHHHHHHHHH-TCCEEEEECTHHHHTTCCCTTCSSHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHhCCCEEEEcCCCcc-hhhHHHHHHHHHHc-CCeEEEEeccCccccCCCCCCCCCHHHHHHHHHHHHHH
Confidence 45566677777889999999987653 23466777777775 884336655 11121 1 11
Q ss_pred HHHHHHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCC
Q 015786 179 LPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGY 226 (400)
Q Consensus 179 ~~~l~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~ 226 (400)
++...+.|...|..+..|..+. ......++.+.++++.+.+..-
T Consensus 119 i~~A~~lG~~~v~~~~~g~~~~----~~~~~~~~~~~~~l~~l~~~a~ 162 (290)
T 2zvr_A 119 TEVAGMFGALVIIGLVRGRREG----RSYEETEELFIESMKRLLELTE 162 (290)
T ss_dssp HHHHHHHTCEEEESGGGCCCTT----SCHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHcCCCEEEecCCCCCCC----cCHHHHHHHHHHHHHHHHHHhc
Confidence 2223345776666333342110 0001126788888888887754
No 151
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=44.69 E-value=1.7e+02 Score=26.07 Aligned_cols=137 Identities=13% Similarity=0.112 Sum_probs=85.3
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEE--ECCCccchhhHHHHHHHhhhcCCCceEEEEecCcch-------------hhhHHH
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRL--TGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-------------ARKLPK 181 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~--~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll-------------~~~~~~ 181 (400)
-+.+++...+...+..| +.|.| |.|- ||..-..+++.+++...+.-++|.-|.+-+ ++.+..
T Consensus 8 ~t~~elr~~~~~~r~~g-~~IgfVPTMG~--LH~GHlsLv~~Ar~~~d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~~ 84 (287)
T 3q12_A 8 ETLPLLRQQIRRWRQEG-KRIALVPTMGN--LHEGHMTLVDEAKTRADVVVVTIFVNPLQFERPDDLAHYPRTLQEDCEK 84 (287)
T ss_dssp CSHHHHHHHHHHHHHTT-CCEEEEEECSS--CCHHHHHHHHHHHTTSSEEEEEECCCGGGCSSHHHHHHSCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcC-CeEEEEcCCCc--ccHHHHHHHHHHHHhCCEEEEEeccCcccCCCcchhhcCCCCHHHHHHH
Confidence 46888999988887776 46777 6663 999888999999886554456777787543 335666
Q ss_pred HHHcCCCeEE-----------------EecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHH
Q 015786 182 LKESGLTSVN-----------------ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEI 244 (400)
Q Consensus 182 l~~~g~~~i~-----------------iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el 244 (400)
+.+.|++.|- |++.+.. +...-..+.+.|+-+...+.+|...=-+. ...+.. ....++
T Consensus 85 l~~~gvd~vF~P~~~emYP~g~~~~t~v~~~~l~-~~LeG~~RPgHF~GV~TVV~KLfniv~Pd---~A~FGe-KD~QQl 159 (287)
T 3q12_A 85 LTRHGADLVFAPAAADIYPAGLEKQTYVDVPALS-TILEGASRPGHFRGVSTIVSKLFNLIQPD---VACFGE-KDYQQL 159 (287)
T ss_dssp HHHHTCSEEECCCHHHHSTTCSTTCCEEECTTTS-SSTHHHHSTTHHHHHHHHHHHHHHHHCCS---EEEEET-TSHHHH
T ss_pred HHHCCCCEEECCChHhcCCCCCCceeEEecCCcc-ccccCCCCcchhhhHHHHHHHHHhccCCC---eeEEch-hHHHHH
Confidence 7778886332 2222221 11222223344888888888887752212 122322 456777
Q ss_pred HHHHHHHHhCCCeEEEE
Q 015786 245 CDFVELTRDRPINIRFI 261 (400)
Q Consensus 245 ~~l~~~~~~~gv~~~~~ 261 (400)
.-+-++.+++.+++..+
T Consensus 160 ~vIrrmV~DL~~pv~Iv 176 (287)
T 3q12_A 160 ALIRKMVADMGYDINIV 176 (287)
T ss_dssp HHHHHHHHHHTCCCEEE
T ss_pred HHHHHHHHHcCCCceEE
Confidence 77777777776665443
No 152
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=44.64 E-value=97 Score=27.01 Aligned_cols=78 Identities=15% Similarity=0.211 Sum_probs=50.3
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECC-Cccch--------hhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHH-HcC
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGG-EPTVR--------KDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLK-ESG 186 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GG-EPll~--------~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~-~~g 186 (400)
-..+.+.+.++.+..+|...|.+..| -|--. ..+.++.+.+++ .|+ .+.+.+-.... +.+..++ ..+
T Consensus 99 ~~~~~~~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~-~Gv-~l~lE~~~~~~-~~~~~l~~~~~ 175 (290)
T 3tva_A 99 SRVAEMKEISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAAN-HGQ-AVHLETGQESA-DHLLEFIEDVN 175 (290)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHT-TTC-EEEEECCSSCH-HHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHH-cCC-EEEEecCCCCH-HHHHHHHHhcC
Confidence 34677888888889999999998644 33211 124555566665 488 78887754333 3444444 445
Q ss_pred CCeEEEecCCC
Q 015786 187 LTSVNISLDTL 197 (400)
Q Consensus 187 ~~~i~iSldg~ 197 (400)
-..+.+.+|..
T Consensus 176 ~~~~g~~~D~~ 186 (290)
T 3tva_A 176 RPNLGINFDPA 186 (290)
T ss_dssp CTTEEEEECHH
T ss_pred CCCEEEEeccH
Confidence 56799999873
No 153
>2ybo_A Methyltransferase; SUMT, NIRE, heme D1 biosynthesis; HET: SAH; 2.00A {Pseudomonas aeruginosa} PDB: 2ybq_A*
Probab=44.27 E-value=44 Score=30.00 Aligned_cols=54 Identities=22% Similarity=0.241 Sum_probs=39.4
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecC
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNG 172 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG 172 (400)
...+++.+.+.+..+.|-..+.+.+|+|+++--..++++.+.+. |+ .+.+.-.-
T Consensus 86 ~~~~~i~~~l~~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~-gi-~vevIPGi 139 (294)
T 2ybo_A 86 LPQEEINELLVRLARQQRRVVRLKGGDPFIFGRGAEELERLLEA-GV-DCQVVPGV 139 (294)
T ss_dssp -CHHHHHHHHHHHHHTTCCEEEEEEBCTTSSSSHHHHHHHHHHT-TC-CEEEECCC
T ss_pred CCHHHHHHHHHHHHHCCCeEEEEcCCCCCccCCHHHHHHHHHHC-CC-CEEEECCH
Confidence 46777776665555667677888999999987777888888874 77 67776543
No 154
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=43.99 E-value=58 Score=29.12 Aligned_cols=68 Identities=19% Similarity=0.277 Sum_probs=34.4
Q ss_pred HHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHH-cCCCeEEEecC
Q 015786 126 AYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKE-SGLTSVNISLD 195 (400)
Q Consensus 126 i~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~-~g~~~i~iSld 195 (400)
++++.++|+..|.-+||.|.....+..+-+.+....+ .+.|.--|-+-.+.+..+.+ .|++.+..|-.
T Consensus 172 le~Li~lGvdrILTSG~~~~a~~Gl~~Lk~Lv~~a~~--rI~ImaGGGV~~~Ni~~l~~~tG~~~~H~S~~ 240 (287)
T 3iwp_A 172 LETLLTLGFERVLTSGCDSSALEGLPLIKRLIEQAKG--RIVVMPGGGITDRNLQRILEGSGATEFHCSAR 240 (287)
T ss_dssp HHHHHHHTCSEEEECTTSSSTTTTHHHHHHHHHHHTT--SSEEEECTTCCTTTHHHHHHHHCCSEEEECCE
T ss_pred HHHHHHcCCCEEECCCCCCChHHhHHHHHHHHHHhCC--CCEEEECCCcCHHHHHHHHHhhCCCEEeECcC
Confidence 3444455777777788777653333222222222111 12333333333455666654 77777777754
No 155
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=43.95 E-value=1.7e+02 Score=25.95 Aligned_cols=75 Identities=16% Similarity=0.142 Sum_probs=45.0
Q ss_pred HHHHHHcCCC-eEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEEEEEecCCChhHHHHHHHHHHhCCC
Q 015786 179 LPKLKESGLT-SVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVNCVVMRGFNDDEICDFVELTRDRPI 256 (400)
Q Consensus 179 ~~~l~~~g~~-~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv 256 (400)
++.+.+.|.+ .|.|.+-.+....-+.+ ..+.+.+.+-++.+++. ++ ++.+.+ .++.+.+++.++++.+.+.|+
T Consensus 112 a~~~~~~g~d~~iein~~~P~~~g~~~~--g~~~e~~~~iv~~vr~~~~~-Pv~vKi--~~~~~~~~~~~~a~~~~~~G~ 186 (311)
T 1jub_A 112 LKKIQESDFSGITELNLSCPNVPGEPQL--AYDFEATEKLLKEVFTFFTK-PLGVKL--PPYFDLVHFDIMAEILNQFPL 186 (311)
T ss_dssp HHHHHHSCCCSEEEEESCCCCSSSCCCG--GGCHHHHHHHHHHHTTTCCS-CEEEEE--CCCCSHHHHHHHHHHHTTSCC
T ss_pred HHHHHhcCCCeEEEEeccCCCCCCcccc--cCCHHHHHHHHHHHHHhcCC-CEEEEE--CCCCCHHHHHHHHHHHHHcCC
Confidence 3445556666 66666644322000011 12466677777777665 56 776664 344566788899999999998
Q ss_pred eE
Q 015786 257 NI 258 (400)
Q Consensus 257 ~~ 258 (400)
+.
T Consensus 187 d~ 188 (311)
T 1jub_A 187 TY 188 (311)
T ss_dssp CE
T ss_pred cE
Confidence 64
No 156
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=43.81 E-value=98 Score=28.07 Aligned_cols=75 Identities=20% Similarity=0.115 Sum_probs=46.8
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEECCC---------cc------c-----hhhHHHHHHHhhhcC--CCceEEEEecCc
Q 015786 116 LLSLNEILRLAYLFVTSGVDKIRLTGGE---------PT------V-----RKDIEEACFHLSKLK--GLKTLAMTTNGL 173 (400)
Q Consensus 116 ~~s~e~i~~ii~~~~~~g~~~i~~~GGE---------Pl------l-----~~~l~~~i~~~~~~~--g~~~~~i~TNG~ 173 (400)
.++.+++.++++.+.+.|+..|.++|+- |+ + .+-..++++.+++.- ++ -|..+|-
T Consensus 221 ~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~i---pVi~~GG 297 (336)
T 1f76_A 221 DLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRL---PIIGVGG 297 (336)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSS---CEEEESS
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCC---CEEEECC
Confidence 3667788888888888999999887631 00 1 112235555555432 33 2344444
Q ss_pred ch-hhhHHHHHHcCCCeEEEe
Q 015786 174 TL-ARKLPKLKESGLTSVNIS 193 (400)
Q Consensus 174 ll-~~~~~~l~~~g~~~i~iS 193 (400)
.. .+.+.+++..|.+.|++.
T Consensus 298 I~~~~da~~~l~~GAd~V~ig 318 (336)
T 1f76_A 298 IDSVIAAREKIAAGASLVQIY 318 (336)
T ss_dssp CCSHHHHHHHHHHTCSEEEES
T ss_pred CCCHHHHHHHHHCCCCEEEee
Confidence 43 566777777888888886
No 157
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=43.65 E-value=66 Score=29.79 Aligned_cols=84 Identities=21% Similarity=0.261 Sum_probs=54.9
Q ss_pred CCCCCCHHHHHHHHHHHH-------hCCCCEEEEECCC---------ccch-------------hh-HHHHHHHhhhcCC
Q 015786 113 KPQLLSLNEILRLAYLFV-------TSGVDKIRLTGGE---------PTVR-------------KD-IEEACFHLSKLKG 162 (400)
Q Consensus 113 ~~~~~s~e~i~~ii~~~~-------~~g~~~i~~~GGE---------Pll~-------------~~-l~~~i~~~~~~~g 162 (400)
..+.||.++|.++++.+. +.|.+.|.++|+. |..+ .. +.++++.+++.-|
T Consensus 144 ~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg 223 (363)
T 3l5l_A 144 VPREMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWP 223 (363)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSC
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcC
Confidence 356799999999988664 3589999999864 5432 12 3688888887543
Q ss_pred --C-ceEEEEec-----C-cchh---hhHHHHHHcCCCeEEEecCC
Q 015786 163 --L-KTLAMTTN-----G-LTLA---RKLPKLKESGLTSVNISLDT 196 (400)
Q Consensus 163 --~-~~~~i~TN-----G-~ll~---~~~~~l~~~g~~~i~iSldg 196 (400)
+ ..+.|..+ | ..++ +.++.|.+.|++.|.+|.-+
T Consensus 224 ~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~ 269 (363)
T 3l5l_A 224 ENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGF 269 (363)
T ss_dssp TTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCc
Confidence 2 13444443 2 2222 23467778899999999643
No 158
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=43.54 E-value=59 Score=28.11 Aligned_cols=75 Identities=15% Similarity=0.148 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcch---hhhHHHHHHc----CCCeEEE
Q 015786 120 NEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL---ARKLPKLKES----GLTSVNI 192 (400)
Q Consensus 120 e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll---~~~~~~l~~~----g~~~i~i 192 (400)
+.+.+.++.+..+|.+.|.+..|...-...+.++.+.+.+. |+ .+.+.+-+..+ .+.+..+++. +-. +.+
T Consensus 84 ~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~l~~l~~~a~~~-Gv-~l~lEn~~~~~~~~~~~~~~ll~~v~~~~~~-vg~ 160 (264)
T 1yx1_A 84 PELEPTLRRAEACGAGWLKVSLGLLPEQPDLAALGRRLARH-GL-QLLVENDQTPQGGRIEVLERFFRLAERQQLD-LAM 160 (264)
T ss_dssp TTHHHHHHHHHHTTCSEEEEEEECCCSSCCHHHHHHHHTTS-SC-EEEEECCSSHHHHCHHHHHHHHHHHHHTTCS-EEE
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHHHHHHHhc-CC-EEEEecCCCCCCCCHHHHHHHHHHHHhcCCC-eEE
Confidence 56788888888999998888755432233678888888774 88 78888765422 1344444432 444 888
Q ss_pred ecCCC
Q 015786 193 SLDTL 197 (400)
Q Consensus 193 Sldg~ 197 (400)
-+|..
T Consensus 161 ~~D~g 165 (264)
T 1yx1_A 161 TFDIG 165 (264)
T ss_dssp EEETT
T ss_pred EEehh
Confidence 88884
No 159
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=43.47 E-value=1.6e+02 Score=25.27 Aligned_cols=112 Identities=12% Similarity=0.148 Sum_probs=64.2
Q ss_pred CHHHHHHHHHHHHhCCCC--EEEEECCC--ccchhhHHHHHHHhhhcCCCc-eEEEEecCcchhhhHHHHHHcCCCeEEE
Q 015786 118 SLNEILRLAYLFVTSGVD--KIRLTGGE--PTVRKDIEEACFHLSKLKGLK-TLAMTTNGLTLARKLPKLKESGLTSVNI 192 (400)
Q Consensus 118 s~e~i~~ii~~~~~~g~~--~i~~~GGE--Pll~~~l~~~i~~~~~~~g~~-~~~i~TNG~ll~~~~~~l~~~g~~~i~i 192 (400)
++..+.+.++.+ +.|.. ++.+.-|. |.+... ..+++.+++..... .+.+-++ -..+.++.+.++|.+.|.|
T Consensus 11 D~~~l~~~i~~~-~~gad~lHvDvmDG~fvpn~t~G-~~~v~~lr~~~~~~~dvhLmv~--dp~~~i~~~~~aGAd~itv 86 (231)
T 3ctl_A 11 DLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLS-PFFVSQVKKLATKPLDCHLMVT--RPQDYIAQLARAGADFITL 86 (231)
T ss_dssp CGGGHHHHHHHH-HTTCSCEEEEEECSSSSSCCCBC-HHHHHHHHTTCCSCEEEEEESS--CGGGTHHHHHHHTCSEEEE
T ss_pred ChhhHHHHHHHH-HcCCCEEEEEEEeCccCccchhc-HHHHHHHHhccCCcEEEEEEec--CHHHHHHHHHHcCCCEEEE
Confidence 344455566666 66755 46666777 655422 34666666543221 3443333 1245678899999999999
Q ss_pred ecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHH
Q 015786 193 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVE 249 (400)
Q Consensus 193 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~ 249 (400)
..+.+.+ .+.+.++.+++.|. .+++ .+.++...+.+.++++
T Consensus 87 h~Ea~~~-------------~~~~~i~~i~~~G~-k~gv--~lnp~tp~~~~~~~l~ 127 (231)
T 3ctl_A 87 HPETING-------------QAFRLIDEIRRHDM-KVGL--ILNPETPVEAMKYYIH 127 (231)
T ss_dssp CGGGCTT-------------THHHHHHHHHHTTC-EEEE--EECTTCCGGGGTTTGG
T ss_pred CcccCCc-------------cHHHHHHHHHHcCC-eEEE--EEECCCcHHHHHHHHh
Confidence 8766211 12355677778888 5555 4466433444554443
No 160
>1ve2_A Uroporphyrin-III C-methyltransferase; heme, biosynthesis, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: c.90.1.1
Probab=43.21 E-value=54 Score=28.10 Aligned_cols=56 Identities=20% Similarity=0.235 Sum_probs=39.4
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCc
Q 015786 116 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGL 173 (400)
Q Consensus 116 ~~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ 173 (400)
....+++.+.+.+..+.|-..+.+.+|+|+++--..++++.+.+. ++ .+.+.-.-+
T Consensus 61 ~~~~~~~~~~i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~-gi-~v~viPGiS 116 (235)
T 1ve2_A 61 KTPQEAITARLIALAREGRVVARLKGGDPMVFGRGGEEALALRRA-GI-PFEVVPGVT 116 (235)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEEESBCTTSSTTHHHHHHHHHHH-TC-CEEEECCCC
T ss_pred ccCHHHHHHHHHHHHHcCCeEEEEcCCCCCcccCHHHHHHHHHHC-CC-CEEEECCHh
Confidence 345677776655555566556777899999987777888888775 77 677765443
No 161
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=42.51 E-value=1.2e+02 Score=28.07 Aligned_cols=83 Identities=13% Similarity=0.203 Sum_probs=52.6
Q ss_pred CCCCCCHHHHHHHHHHH-------HhCCCCEEEEECCC---------ccch-------------hh-HHHHHHHhhhcCC
Q 015786 113 KPQLLSLNEILRLAYLF-------VTSGVDKIRLTGGE---------PTVR-------------KD-IEEACFHLSKLKG 162 (400)
Q Consensus 113 ~~~~~s~e~i~~ii~~~-------~~~g~~~i~~~GGE---------Pll~-------------~~-l~~~i~~~~~~~g 162 (400)
..+.|+.++|..+++.+ .+.|...|.+.+|- |..+ .. +.++++.+++.-+
T Consensus 147 ~p~~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg 226 (365)
T 2gou_A 147 VPRAMTKADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIG 226 (365)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHC
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcC
Confidence 35679999999888755 35789999998865 4322 12 3577777775433
Q ss_pred C--ceEEEEecCc--------chh---hhHHHHHHcCCCeEEEecC
Q 015786 163 L--KTLAMTTNGL--------TLA---RKLPKLKESGLTSVNISLD 195 (400)
Q Consensus 163 ~--~~~~i~TNG~--------ll~---~~~~~l~~~g~~~i~iSld 195 (400)
- ..+.|..++. .++ +.++.|.+.|++.|.+|--
T Consensus 227 ~~pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~ 272 (365)
T 2gou_A 227 AERVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEV 272 (365)
T ss_dssp GGGEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCcEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 1 1344444332 121 2246777889999999853
No 162
>1va0_A Uroporphyrin-III C-methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.97A {Thermus thermophilus} SCOP: c.90.1.1 PDB: 1v9a_A
Probab=41.23 E-value=53 Score=28.21 Aligned_cols=58 Identities=24% Similarity=0.271 Sum_probs=39.7
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcch
Q 015786 116 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL 175 (400)
Q Consensus 116 ~~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll 175 (400)
..+.+++.+.+.+..+.|-..+.+.+|+|+++--..++++.+.+. |+ .+.+...-+.+
T Consensus 58 ~~~~~~~~~~i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~-gi-~v~viPGiSs~ 115 (239)
T 1va0_A 58 SEKQEEIHRLLLRHARAHPFVVRLKGGDPMVFGRGGEEVLFLLRH-GV-PVEVVPGVTSL 115 (239)
T ss_dssp --CHHHHHHHHHHHHHTSSEEEEEESBCTTSSSSHHHHHHHHHHT-TC-CEEEECCCCGG
T ss_pred ccCHHHHHHHHHHHHHCCCcEEEEeCCCCccccCHHHHHHHHHHC-CC-cEEEECCcchH
Confidence 356677766665555566566777899999987777888888774 77 67776544433
No 163
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=41.16 E-value=1.8e+02 Score=25.40 Aligned_cols=124 Identities=15% Similarity=0.085 Sum_probs=73.2
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEECCCccch--hhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHc--CCCeE
Q 015786 115 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVR--KDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKES--GLTSV 190 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~--~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~--g~~~i 190 (400)
...+.+.+.+.+.++.+.|..-|.+.||-+... .++.+++..+.+..++ .++|.|-= .+.++.-++. |. .+
T Consensus 20 ~~~~~~~a~~~a~~~v~~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~~~~~-pisIDT~~---~~v~~aAl~a~~Ga-~i 94 (262)
T 1f6y_A 20 QERDPAPVQEWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVSNL-TLCLDSTN---IKAIEAGLKKCKNR-AM 94 (262)
T ss_dssp HHTCHHHHHHHHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHTTCCS-EEEEECSC---HHHHHHHHHHCSSC-EE
T ss_pred hcCCHHHHHHHHHHHHHCCCcEEEECCCCCCCChHHHHHHHHHHHHHhCCC-eEEEeCCC---HHHHHHHHhhCCCC-CE
Confidence 346788888888888899999999988754433 3377778877765466 68888742 3445555554 66 45
Q ss_pred EEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecC--CChh----HHHHHHHHHHhCCCe
Q 015786 191 NISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRG--FNDD----EICDFVELTRDRPIN 257 (400)
Q Consensus 191 ~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~--~n~~----el~~l~~~~~~~gv~ 257 (400)
.-|+.|. .+. ++. .+..+.++|. ++.+...-..| .+.+ .+.+.++.+.+.|+.
T Consensus 95 INdvs~~-~d~---------~~~---~~~~~a~~~~-~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~ 153 (262)
T 1f6y_A 95 INSTNAE-REK---------VEK---LFPLAVEHGA-ALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLP 153 (262)
T ss_dssp EEEECSC-HHH---------HHH---HHHHHHHTTC-EEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCC
T ss_pred EEECCCC-ccc---------HHH---HHHHHHHhCC-cEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
Confidence 5556553 111 222 3345567777 55554431122 2333 345666677777774
No 164
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=40.95 E-value=2.2e+02 Score=26.62 Aligned_cols=139 Identities=9% Similarity=0.057 Sum_probs=80.9
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccc----hhh---HHHHHHHhhhcC--CCceEEEEecCcchhhh----HHHHH
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTV----RKD---IEEACFHLSKLK--GLKTLAMTTNGLTLARK----LPKLK 183 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll----~~~---l~~~i~~~~~~~--g~~~~~i~TNG~ll~~~----~~~l~ 183 (400)
.+.+++.+.++.+.+.|...|.+.|+++.- ..+ -.+.++.+++.- ++ .+.+.-|+..-.+. ++.|.
T Consensus 124 ~~~e~~~~~a~~~~~~G~~~iKl~G~~~~~~~~~~~~~~~d~e~v~avR~avG~d~-~L~vDaN~~~~~~~A~~~~~~L~ 202 (405)
T 3rr1_A 124 DRPADVIAGMKALQAGGFDHFKLNGCEEMGIIDTSRAVDAAVARVAEIRSAFGNTV-EFGLDFHGRVSAPMAKVLIKELE 202 (405)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEESCCSSSCBCSHHHHHHHHHHHHHHHHTTGGGS-EEEEECCSCBCHHHHHHHHHHHG
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCcccccccchhHHHHHHHHHHHHHHhCCCc-eEEEECCCCCCHHHHHHHHHHHH
Confidence 468888888888888999999997654321 111 245666666542 44 68889998654332 35566
Q ss_pred HcCCCeEEEecCCCCHHHHHHhhcCCC--------HHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCC
Q 015786 184 ESGLTSVNISLDTLVPAKFEFLTRRKG--------HEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRP 255 (400)
Q Consensus 184 ~~g~~~i~iSldg~~~~~~~~ir~~~~--------~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~g 255 (400)
+.++.+|.=.+...+.+.+..++..-+ ... ...++.+.+.|.-.+ ++.-+.+---..+..++.++++..|
T Consensus 203 ~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~i~~-~~~~~~~l~~~a~d~-v~~d~~~~GGitea~kia~lA~~~g 280 (405)
T 3rr1_A 203 PYRPLFIEEPVLAEQAETYARLAAHTHLPIAAGERMFS-RFDFKRVLEAGGVSI-LQPDLSHAGGITECVKIAAMAEAYD 280 (405)
T ss_dssp GGCCSCEECSSCCSSTHHHHHHHTTCSSCEEECTTCCS-HHHHHHHHHHCCCSE-ECCBTTTTTHHHHHHHHHHHHHTTT
T ss_pred hcCCCEEECCCCcccHHHHHHHHhcCCCCEEecCCcCC-HHHHHHHHHHhCCCe-EEEChhhcCCHHHHHHHHHHHHHcC
Confidence 678888876655444556666654211 111 223344444443021 2222222002467888888999888
Q ss_pred CeE
Q 015786 256 INI 258 (400)
Q Consensus 256 v~~ 258 (400)
+.+
T Consensus 281 i~v 283 (405)
T 3rr1_A 281 VAL 283 (405)
T ss_dssp CEE
T ss_pred CEE
Confidence 764
No 165
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=40.88 E-value=2.3e+02 Score=27.33 Aligned_cols=118 Identities=14% Similarity=0.100 Sum_probs=65.8
Q ss_pred HHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcC-CCceEEEEecCcchhhhHHHHHHcCCCeEEEecCCCCHHH
Q 015786 123 LRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLK-GLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDTLVPAK 201 (400)
Q Consensus 123 ~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~-g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~iSldg~~~~~ 201 (400)
.+.++.+.+.|+..|.+....+. .+.+.+.++.+++.. ++ .+.+ .|.. ..+.+..+.++|.+.|.++.-+.....
T Consensus 231 ~~~a~~l~~aG~d~I~id~a~g~-~~~~~~~v~~i~~~~p~~-~Vi~-g~v~-t~e~a~~l~~aGaD~I~vg~g~Gs~~~ 306 (490)
T 4avf_A 231 GERVAALVAAGVDVVVVDTAHGH-SKGVIERVRWVKQTFPDV-QVIG-GNIA-TAEAAKALAEAGADAVKVGIGPGSICT 306 (490)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCS-BHHHHHHHHHHHHHCTTS-EEEE-EEEC-SHHHHHHHHHTTCSEEEECSSCSTTCH
T ss_pred HHHHHHHhhcccceEEecccCCc-chhHHHHHHHHHHHCCCc-eEEE-eeeC-cHHHHHHHHHcCCCEEEECCCCCcCCC
Confidence 33455555678888888764442 245677888887753 44 3333 2322 236678899999999999753322222
Q ss_pred HHHhhcCCC--HHHHHHHHHHHHHcCCCcEEEEEEEecCC-ChhHHHHHHH
Q 015786 202 FEFLTRRKG--HEKVMESINAAIEVGYNPVKVNCVVMRGF-NDDEICDFVE 249 (400)
Q Consensus 202 ~~~ir~~~~--~~~v~~~i~~l~~~g~~~v~i~~~v~~~~-n~~el~~l~~ 249 (400)
.+...+.+. +..+.+..+.+.+.++ ++.. .-|. +.+++.+.+.
T Consensus 307 t~~~~g~g~p~~~~l~~v~~~~~~~~i-PVIa----~GGI~~~~di~kal~ 352 (490)
T 4avf_A 307 TRIVAGVGVPQISAIANVAAALEGTGV-PLIA----DGGIRFSGDLAKAMV 352 (490)
T ss_dssp HHHHTCBCCCHHHHHHHHHHHHTTTTC-CEEE----ESCCCSHHHHHHHHH
T ss_pred ccccCCCCccHHHHHHHHHHHhccCCC-cEEE----eCCCCCHHHHHHHHH
Confidence 233333322 5555554444445566 4422 2233 5566666554
No 166
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=40.88 E-value=1.9e+02 Score=25.61 Aligned_cols=124 Identities=12% Similarity=0.164 Sum_probs=71.5
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEE-ecCcchhhhHHHHHHcCCCeEEEe
Q 015786 115 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMT-TNGLTLARKLPKLKESGLTSVNIS 193 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~-TNG~ll~~~~~~l~~~g~~~i~iS 193 (400)
...+.+++.+.++ +.|+....+....+.. .+-..+++.+++..+. ...+. .+.....++++++.+.|+..|.+.
T Consensus 52 ~~~~~e~l~~~m~---~~GI~~~Vlvq~~~~~-~dN~~ll~~l~~~~~r-~~Gva~vdp~~~~~eL~~l~~~G~rGvR~~ 126 (303)
T 4d9a_A 52 RDAGPDMLFALRD---HLGFARNVIVQASCHG-TDNAATLDAIARAQGK-ARGIAVVDPAIDEAELAALHEGGMRGIRFN 126 (303)
T ss_dssp CCBCHHHHHHHHH---HHTCSEEEEECCGGGT-TCCHHHHHHHHHTTTS-EEEEECCCTTCCHHHHHHHHHTTEEEEEEE
T ss_pred CCCCHHHHHHHHH---HcCCCeEEEecccccc-ccHHHHHHHHHhCCCc-EEEEEEeCCCCCHHHHHHHHHCCCCEEEee
Confidence 3567887766665 6788877777644322 1223344444443332 23333 233333467788888888888887
Q ss_pred cCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCCCeE
Q 015786 194 LDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINI 258 (400)
Q Consensus 194 ldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~~ 258 (400)
+.... .+.-..+.+...++.+.+ |. .+.+.+ ...++.++.+++.+.++.+
T Consensus 127 ~~~~~-------~~~~~~~~~~~~~~~l~~-gl-~v~l~~------~~~~l~~l~~~~~~~~~~i 176 (303)
T 4d9a_A 127 FLKRL-------VDDAPKDKFLEVAGRLPA-GW-HVVIYF------EADILEELRPFMDAIPVPI 176 (303)
T ss_dssp CCTTT-------CSCCCHHHHHHHHTSCCT-TC-EEEEEC------CGGGHHHHHHHHHHCSSCE
T ss_pred cccCC-------ccccCHHHHHHHHHHHhc-CC-EEEEec------ccccHHHHHHHHHHCCCcE
Confidence 75421 111234666677777777 88 555442 2356777888888775544
No 167
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=40.42 E-value=1.3e+02 Score=28.50 Aligned_cols=82 Identities=12% Similarity=0.162 Sum_probs=54.4
Q ss_pred CCCCCHHHHHHHHHHHH-------hCCCCEEEEECCC---------ccchh--------------h-HHHHHHHhhhcC-
Q 015786 114 PQLLSLNEILRLAYLFV-------TSGVDKIRLTGGE---------PTVRK--------------D-IEEACFHLSKLK- 161 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~-------~~g~~~i~~~GGE---------Pll~~--------------~-l~~~i~~~~~~~- 161 (400)
.+.|+.++|.++++.+. +.|.+.|.++||. |..+. . +.++++.+++.-
T Consensus 157 pr~mt~~eI~~ii~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~ 236 (419)
T 3l5a_A 157 VIAMSHEKINSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVID 236 (419)
T ss_dssp EEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHh
Confidence 46799999999988664 4799999999886 75431 2 357777776532
Q ss_pred -----CCceEEEEec---------Ccchhh---hHHHHHH-cCCCeEEEecCC
Q 015786 162 -----GLKTLAMTTN---------GLTLAR---KLPKLKE-SGLTSVNISLDT 196 (400)
Q Consensus 162 -----g~~~~~i~TN---------G~ll~~---~~~~l~~-~g~~~i~iSldg 196 (400)
.+ .+.+--+ |..+++ .+..|.+ .|++.|.||--+
T Consensus 237 ~~~~~~f-~v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~ 288 (419)
T 3l5a_A 237 KEAPDNF-ILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWG 288 (419)
T ss_dssp HHCCTTC-EEEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTT
T ss_pred hhcCCCe-eEEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCC
Confidence 22 2333222 444432 3467778 899999999644
No 168
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=39.94 E-value=2.4e+02 Score=27.00 Aligned_cols=72 Identities=19% Similarity=0.212 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHhCCCCEEEEEC--CCccchhhHHHHHHHhhhcC-CCceEEEEecCcchhhhHHHHHHcCCCeEEEecCC
Q 015786 120 NEILRLAYLFVTSGVDKIRLTG--GEPTVRKDIEEACFHLSKLK-GLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDT 196 (400)
Q Consensus 120 e~i~~ii~~~~~~g~~~i~~~G--GEPll~~~l~~~i~~~~~~~-g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~iSldg 196 (400)
+.+.+.+..+.+.|+..|.+.. |.| ....+.++.+++.. ++ .+.+ -++.. .+.+..+.+.|++.|.+|..+
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~G~~---~~~~e~i~~i~~~~p~~-pvi~-g~~~t-~e~a~~l~~~G~d~I~v~~~~ 309 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAHGHS---RRVIETLEMIKADYPDL-PVVA-GNVAT-PEGTEALIKAGADAVKVGVGP 309 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCCSS---HHHHHHHHHHHHHCTTS-CEEE-EEECS-HHHHHHHHHTTCSEEEECSSC
T ss_pred HhHHHHHHHHHHhCCCEEEEEecCCch---HHHHHHHHHHHHHCCCc-eEEe-CCcCC-HHHHHHHHHcCCCEEEEcCCC
Confidence 3445566777788999888854 544 33456677777653 44 4443 33322 356788889999999998876
Q ss_pred C
Q 015786 197 L 197 (400)
Q Consensus 197 ~ 197 (400)
.
T Consensus 310 G 310 (494)
T 1vrd_A 310 G 310 (494)
T ss_dssp S
T ss_pred C
Confidence 4
No 169
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=39.58 E-value=2.7e+02 Score=30.15 Aligned_cols=119 Identities=10% Similarity=0.125 Sum_probs=75.7
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEECCCccchhh-HHHHHHHhhhcCCCceEEEEec---CcchhhhHHHHHHcCCCeEE
Q 015786 116 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKD-IEEACFHLSKLKGLKTLAMTTN---GLTLARKLPKLKESGLTSVN 191 (400)
Q Consensus 116 ~~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~-l~~~i~~~~~~~g~~~~~i~TN---G~ll~~~~~~l~~~g~~~i~ 191 (400)
.-+.+.+.++++.+.+.|...|.|----=++.|. +.++++.+++..++ .+.+.|. |.-+ -....-.++|++.|.
T Consensus 688 ~~~~~~~~~~a~~~~~~Ga~~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~-~i~~H~Hnt~G~a~-An~laA~~aGa~~vD 765 (1150)
T 3hbl_A 688 IYTLEYYVKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKSAVDL-PIHLHTHDTSGNGL-LTYKQAIDAGVDIID 765 (1150)
T ss_dssp SSSHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHCCS-CEEEEECBTTSCHH-HHHHHHHHTTCSEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCeeeEcCccCCCCHHHHHHHHHHHHHhcCC-eEEEEeCCCCcHHH-HHHHHHHHhCCCEEE
Confidence 3678999999999999999999995311123333 66777777765565 6777763 3222 233444568999999
Q ss_pred EecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHh
Q 015786 192 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRD 253 (400)
Q Consensus 192 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~ 253 (400)
.|+.|...-. +....+.++.+++. .|+ . .|.+.+.+.++.+++.+
T Consensus 766 ~ai~GlG~~~-----gn~~lE~lv~~L~~---~g~-~--------tgidl~~l~~~~~~~~~ 810 (1150)
T 3hbl_A 766 TAVASMSGLT-----SQPSANSLYYALNG---FPR-H--------LRTDIEGMESLSHYWST 810 (1150)
T ss_dssp EBCGGGCSBT-----SCCBHHHHHHHTTT---SSC-C--------BCSCHHHHHHHHHHHHH
T ss_pred EeccccCCCC-----CCccHHHHHHHHHh---cCC-C--------cCccHHHHHHHHHHHHH
Confidence 9999975322 22235666655543 355 2 25677777766666654
No 170
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=39.57 E-value=1.1e+02 Score=28.00 Aligned_cols=32 Identities=13% Similarity=0.221 Sum_probs=16.8
Q ss_pred EEEEECCCc----cchhhHHHHHHHhhhcCCCceEEE
Q 015786 136 KIRLTGGEP----TVRKDIEEACFHLSKLKGLKTLAM 168 (400)
Q Consensus 136 ~i~~~GGEP----ll~~~l~~~i~~~~~~~g~~~~~i 168 (400)
.|.|+.+|- .-..+..++++.+.+. |+..+.+
T Consensus 213 ~vRls~~~~~~~g~~~~~~~~la~~L~~~-Gvd~i~v 248 (340)
T 3gr7_A 213 FVRISASDYHPDGLTAKDYVPYAKRMKEQ-GVDLVDV 248 (340)
T ss_dssp EEEEESCCCSTTSCCGGGHHHHHHHHHHT-TCCEEEE
T ss_pred EEEeccccccCCCCCHHHHHHHHHHHHHc-CCCEEEE
Confidence 456664331 1124466677777664 6644444
No 171
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=39.38 E-value=2.7e+02 Score=26.86 Aligned_cols=121 Identities=16% Similarity=0.160 Sum_probs=67.9
Q ss_pred HHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcC-CCceEEEEecCcchhhhHHHHHHcCCCeEEEecCCCCHHHHHH
Q 015786 126 AYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLK-GLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDTLVPAKFEF 204 (400)
Q Consensus 126 i~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~-g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~iSldg~~~~~~~~ 204 (400)
++.+.+.|+..|.+....|-. ..+.++++.+++.. ++ .+.+ .|.. ..+.+..+.++|.+.|.++.-.......+.
T Consensus 236 a~~l~~aG~d~I~id~a~g~~-~~~~~~i~~ir~~~p~~-~Vi~-g~v~-t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~ 311 (496)
T 4fxs_A 236 VKALVEAGVDVLLIDSSHGHS-EGVLQRIRETRAAYPHL-EIIG-GNVA-TAEGARALIEAGVSAVKVGIGPGSICTTRI 311 (496)
T ss_dssp HHHHHHTTCSEEEEECSCTTS-HHHHHHHHHHHHHCTTC-CEEE-EEEC-SHHHHHHHHHHTCSEEEECSSCCTTBCHHH
T ss_pred HHHHHhccCceEEeccccccc-hHHHHHHHHHHHHCCCc-eEEE-cccC-cHHHHHHHHHhCCCEEEECCCCCcCccccc
Confidence 344445688889887755422 44677888887753 44 3433 2322 236678899999999998753322222233
Q ss_pred hhcCC--CHHHHHHHHHHHHHcCCCcEEEEEEEecCC-ChhHHHHHHHHHHhCCCeEE
Q 015786 205 LTRRK--GHEKVMESINAAIEVGYNPVKVNCVVMRGF-NDDEICDFVELTRDRPINIR 259 (400)
Q Consensus 205 ir~~~--~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~-n~~el~~l~~~~~~~gv~~~ 259 (400)
..+.+ .+..+.+..+.+.+.++ ++... -|. +..++.+.+. .|.+..
T Consensus 312 ~~g~g~p~~~~i~~v~~~~~~~~i-PVIa~----GGI~~~~di~kala----~GAd~V 360 (496)
T 4fxs_A 312 VTGVGVPQITAIADAAGVANEYGI-PVIAD----GGIRFSGDISKAIA----AGASCV 360 (496)
T ss_dssp HHCCCCCHHHHHHHHHHHHGGGTC-CEEEE----SCCCSHHHHHHHHH----TTCSEE
T ss_pred ccCCCccHHHHHHHHHHHhccCCC-eEEEe----CCCCCHHHHHHHHH----cCCCeE
Confidence 33432 25555655555556676 54322 122 4455655543 466543
No 172
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=39.22 E-value=1e+02 Score=26.32 Aligned_cols=18 Identities=11% Similarity=-0.005 Sum_probs=8.2
Q ss_pred CHHHHHHHHHHHHhCCCC
Q 015786 118 SLNEILRLAYLFVTSGVD 135 (400)
Q Consensus 118 s~e~i~~ii~~~~~~g~~ 135 (400)
+.+.+.++.+.+.+.|+.
T Consensus 59 ~~~~~~~~~~~l~~~gl~ 76 (257)
T 3lmz_A 59 TDEQIRAFHDKCAAHKVT 76 (257)
T ss_dssp CHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHHHHcCCe
Confidence 344444444444455543
No 173
>2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A
Probab=39.16 E-value=2.2e+02 Score=25.70 Aligned_cols=72 Identities=13% Similarity=0.107 Sum_probs=43.1
Q ss_pred HHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEE--EecC-CChhHHHHHHHHHHhCCCeEE
Q 015786 183 KESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCV--VMRG-FNDDEICDFVELTRDRPINIR 259 (400)
Q Consensus 183 ~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~--v~~~-~n~~el~~l~~~~~~~gv~~~ 259 (400)
..++++.|-|.+++.... ++..+.|+.|++.+. .+.+.++ ..+. .+. +=.++++.+++.|+.+.
T Consensus 108 ~~ygldGIDfDiE~~~~~-----------d~~~~aL~~l~~~~p-~~~vs~TL~~~p~gl~~-~g~~~l~~a~~~g~~ld 174 (311)
T 2dsk_A 108 DTYNATYLDFDIEAGIDA-----------DKLADALLIVQRERP-WVKFSFTLPSDPGIGLA-GGYGIIETMAKKGVRVD 174 (311)
T ss_dssp HHHTCSEEEEEECSCCCH-----------HHHHHHHHHHHHHST-TCEEEEEEEEETTTEES-THHHHHHHHHHHTCCCC
T ss_pred HHhCCCcEEEeccCCccH-----------HHHHHHHHHHHhhCC-CcEEEEEeccCCCCCCc-chHHHHHHHHHcCcccc
Confidence 357899999999986321 366677788777643 3344443 4431 122 22345666677777666
Q ss_pred EEeeecCC
Q 015786 260 FIEFMPFD 267 (400)
Q Consensus 260 ~~~~~p~~ 267 (400)
++..|.++
T Consensus 175 ~VniM~~D 182 (311)
T 2dsk_A 175 RVNPMTMD 182 (311)
T ss_dssp EEEEECCC
T ss_pred EEEEEeec
Confidence 67766654
No 174
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=39.03 E-value=61 Score=27.65 Aligned_cols=116 Identities=12% Similarity=0.044 Sum_probs=68.3
Q ss_pred HHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHc--CCCeEEE-ecCCCCHHH
Q 015786 125 LAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKES--GLTSVNI-SLDTLVPAK 201 (400)
Q Consensus 125 ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~--g~~~i~i-Sldg~~~~~ 201 (400)
.++.+.+.|...|+|+++++-.. +.+.++.+++. |+ .+.+..|.....+.+..+.+. +.+.|.+ |+....
T Consensus 79 ~i~~~~~agad~v~vH~~~~~~~--~~~~~~~i~~~-g~-~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~--- 151 (228)
T 1h1y_A 79 YVEPLAKAGASGFTFHIEVSRDN--WQELIQSIKAK-GM-RPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGF--- 151 (228)
T ss_dssp GHHHHHHHTCSEEEEEGGGCTTT--HHHHHHHHHHT-TC-EEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTC---
T ss_pred HHHHHHHcCCCEEEECCCCcccH--HHHHHHHHHHc-CC-CEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCC---
Confidence 35555567889999999765321 25677777774 77 677877765444566677664 6887766 333210
Q ss_pred HHHhhcCCCH-HHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCCCeEE
Q 015786 202 FEFLTRRKGH-EKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINIR 259 (400)
Q Consensus 202 ~~~ir~~~~~-~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~~~ 259 (400)
.+ ..| ...++.++.+++.-. . +.+.+.-|.|.+.+.++++. |+++.
T Consensus 152 ----~g-~~~~~~~l~~i~~~~~~~~-~--~pi~v~GGI~~~ni~~~~~a----GaD~v 198 (228)
T 1h1y_A 152 ----GG-QKFMPEMMEKVRALRKKYP-S--LDIEVDGGLGPSTIDVAASA----GANCI 198 (228)
T ss_dssp ----SS-CCCCGGGHHHHHHHHHHCT-T--SEEEEESSCSTTTHHHHHHH----TCCEE
T ss_pred ----Cc-ccCCHHHHHHHHHHHHhcC-C--CCEEEECCcCHHHHHHHHHc----CCCEE
Confidence 01 112 234455566655421 1 23455667888878777654 66643
No 175
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=38.99 E-value=1.6e+02 Score=26.19 Aligned_cols=75 Identities=17% Similarity=0.018 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHHHhCCCC-EEEEECCCccc--------hhh-HHHHHHHhhhcCCCceEEEEecCcchhhh----HHHHH
Q 015786 118 SLNEILRLAYLFVTSGVD-KIRLTGGEPTV--------RKD-IEEACFHLSKLKGLKTLAMTTNGLTLARK----LPKLK 183 (400)
Q Consensus 118 s~e~i~~ii~~~~~~g~~-~i~~~GGEPll--------~~~-l~~~i~~~~~~~g~~~~~i~TNG~ll~~~----~~~l~ 183 (400)
+.+++.+.++.+.+.|.. .|.+.-+-|.. .++ +.++++.+++..++ .+.+-..+.+-.+. ++.+.
T Consensus 104 ~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~-Pv~vKi~~~~~~~~~~~~a~~~~ 182 (311)
T 1jub_A 104 SAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTK-PLGVKLPPYFDLVHFDIMAEILN 182 (311)
T ss_dssp SHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCS-CEEEEECCCCSHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCC-CEEEEECCCCCHHHHHHHHHHHH
Confidence 688999999999899988 78886655543 333 57888888875444 44443333322222 45666
Q ss_pred HcCCCeEEEe
Q 015786 184 ESGLTSVNIS 193 (400)
Q Consensus 184 ~~g~~~i~iS 193 (400)
+.|++.|.++
T Consensus 183 ~~G~d~i~v~ 192 (311)
T 1jub_A 183 QFPLTYVNSV 192 (311)
T ss_dssp TSCCCEEEEC
T ss_pred HcCCcEEEec
Confidence 7899888765
No 176
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=38.98 E-value=1.9e+02 Score=25.69 Aligned_cols=88 Identities=13% Similarity=0.158 Sum_probs=49.1
Q ss_pred EEEEecCcchhh---hHHHHHHcCCC---eEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEEEEEecC
Q 015786 166 LAMTTNGLTLAR---KLPKLKESGLT---SVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVNCVVMRG 238 (400)
Q Consensus 166 ~~i~TNG~ll~~---~~~~l~~~g~~---~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~~v~~~ 238 (400)
+.++-.|...++ .++.+.+.|++ .|.|.+-.+...--+.+ ..+.+.+.+.++.+++. ++ ++.+... ++
T Consensus 96 ~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~--g~~~~~~~~ii~~vr~~~~~-Pv~vK~~--~~ 170 (314)
T 2e6f_A 96 LFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQV--AYDFEAMRTYLQQVSLAYGL-PFGVKMP--PY 170 (314)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCG--GGSHHHHHHHHHHHHHHHCS-CEEEEEC--CC
T ss_pred EEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhh--cCCHHHHHHHHHHHHHhcCC-CEEEEEC--CC
Confidence 444444544432 23445555556 56666644321100011 12356666666666654 66 7777643 44
Q ss_pred CChhHHHHHHHHHHhCC-CeE
Q 015786 239 FNDDEICDFVELTRDRP-INI 258 (400)
Q Consensus 239 ~n~~el~~l~~~~~~~g-v~~ 258 (400)
.+.+++.++++.+.+.| ++.
T Consensus 171 ~~~~~~~~~a~~~~~aG~~d~ 191 (314)
T 2e6f_A 171 FDIAHFDTAAAVLNEFPLVKF 191 (314)
T ss_dssp CCHHHHHHHHHHHHTCTTEEE
T ss_pred CCHHHHHHHHHHHHhcCCceE
Confidence 56678889999999988 763
No 177
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=38.88 E-value=73 Score=27.43 Aligned_cols=117 Identities=11% Similarity=0.083 Sum_probs=67.7
Q ss_pred HHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCeEEE-ecCCCCH-HHH
Q 015786 125 LAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNI-SLDTLVP-AKF 202 (400)
Q Consensus 125 ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~i-Sldg~~~-~~~ 202 (400)
.++.+.+.|...|++++..|. +++.++++.+++. |. .+.+..|.....+.+..+++ +++.|.+ |++..-. ..+
T Consensus 72 ~i~~~~~aGAd~itvh~Ea~~--~~~~~~i~~i~~~-G~-k~gv~lnp~tp~~~~~~~l~-~~D~VlvmsV~pGfggQ~f 146 (231)
T 3ctl_A 72 YIAQLARAGADFITLHPETIN--GQAFRLIDEIRRH-DM-KVGLILNPETPVEAMKYYIH-KADKITVMTVDPGFAGQPF 146 (231)
T ss_dssp THHHHHHHTCSEEEECGGGCT--TTHHHHHHHHHHT-TC-EEEEEECTTCCGGGGTTTGG-GCSEEEEESSCTTCSSCCC
T ss_pred HHHHHHHcCCCEEEECcccCC--ccHHHHHHHHHHc-CC-eEEEEEECCCcHHHHHHHHh-cCCEEEEeeeccCcCCccc
Confidence 457777889999999964423 3567889999885 87 67888887654455655555 4776653 5543110 000
Q ss_pred HHhhcCCCHHHHHHHHHHHH-HcCCCcEEEEEEEecCCChhHHHHHHHHHHhCCCeE
Q 015786 203 EFLTRRKGHEKVMESINAAI-EVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINI 258 (400)
Q Consensus 203 ~~ir~~~~~~~v~~~i~~l~-~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~~ 258 (400)
.....+++ +.++.+. +.|. .+. ..+.-|.|.+.+.++++. |+++
T Consensus 147 ----~~~~l~kI-~~lr~~~~~~~~-~~~--I~VdGGI~~~~~~~~~~a----GAd~ 191 (231)
T 3ctl_A 147 ----IPEMLDKL-AELKAWREREGL-EYE--IEVDGSCNQATYEKLMAA----GADV 191 (231)
T ss_dssp ----CTTHHHHH-HHHHHHHHHHTC-CCE--EEEESCCSTTTHHHHHHH----TCCE
T ss_pred ----cHHHHHHH-HHHHHHHhccCC-Cce--EEEECCcCHHHHHHHHHc----CCCE
Confidence 00112333 2333333 2344 333 345557888888877653 6654
No 178
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=38.87 E-value=2.4e+02 Score=26.09 Aligned_cols=90 Identities=14% Similarity=0.103 Sum_probs=0.0
Q ss_pred CCHHHHHHHHHHHHh--CCCCEEEEECCCccchhhHHHHHHHhhhcC-CCceEEEEecCcchh-hhHHHHHHcC-CCeEE
Q 015786 117 LSLNEILRLAYLFVT--SGVDKIRLTGGEPTVRKDIEEACFHLSKLK-GLKTLAMTTNGLTLA-RKLPKLKESG-LTSVN 191 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~--~g~~~i~~~GGEPll~~~l~~~i~~~~~~~-g~~~~~i~TNG~ll~-~~~~~l~~~g-~~~i~ 191 (400)
++.++..++++.+.+ .++..|- ||+ .++-.+..+.+++.. ++ -|.++..+ + +.+..+++.+ ++.|+
T Consensus 201 ~~~~~a~~~~~~l~~~g~~i~~iE----qP~-~~~~~~~~~~l~~~~~~i---PIa~dE~~-~~~~~~~~i~~~~~d~v~ 271 (389)
T 2oz8_A 201 WTSKEALTKLVAIREAGHDLLWVE----DPI-LRHDHDGLRTLRHAVTWT---QINSGEYL-DLQGKRLLLEAHAADILN 271 (389)
T ss_dssp BCHHHHHHHHHHHHHTTCCCSEEE----SCB-CTTCHHHHHHHHHHCCSS---EEEECTTC-CHHHHHHHHHTTCCSEEE
T ss_pred CCHHHHHHHHHHHHhcCCCceEEe----CCC-CCcCHHHHHHHHhhCCCC---CEEeCCCC-CHHHHHHHHHcCCCCEEE
Q ss_pred EecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEE
Q 015786 192 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKV 231 (400)
Q Consensus 192 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i 231 (400)
+. +++...++.++.+.+.|+ .+.+
T Consensus 272 ik---------------GGit~a~~i~~~A~~~gi-~~~~ 295 (389)
T 2oz8_A 272 VH---------------GQVTDVMRIGWLAAELGI-PISI 295 (389)
T ss_dssp EC---------------SCHHHHHHHHHHHHHHTC-CEEE
T ss_pred EC---------------cCHHHHHHHHHHHHHcCC-eEee
No 179
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=38.87 E-value=1.4e+02 Score=27.60 Aligned_cols=70 Identities=16% Similarity=0.231 Sum_probs=45.4
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEE--CC---------Cccchhh-HHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHH
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLT--GG---------EPTVRKD-IEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKE 184 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~--GG---------EPll~~~-l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~ 184 (400)
-+.+++.+.+++..+.|...|.+. || .+.+.++ +.++++.+++. |+ .+.+...+ .+.+...++
T Consensus 172 ~~~~~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~-g~-~v~~H~~~---~~~i~~al~ 246 (426)
T 2r8c_A 172 DGVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGR-GT-YVLAHAYT---PAAIARAVR 246 (426)
T ss_dssp CSHHHHHHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHT-TC-CEEEEECS---HHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHc-CC-EEEEEeCC---hHHHHHHHH
Confidence 357888888887766676656554 32 2245454 77888888875 77 67777664 244566666
Q ss_pred cCCCeEE
Q 015786 185 SGLTSVN 191 (400)
Q Consensus 185 ~g~~~i~ 191 (400)
.|.+.+.
T Consensus 247 ~G~~~i~ 253 (426)
T 2r8c_A 247 CGVRTIE 253 (426)
T ss_dssp TTCSEEE
T ss_pred cCCCEEe
Confidence 7776554
No 180
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=38.58 E-value=81 Score=27.08 Aligned_cols=72 Identities=8% Similarity=0.012 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCc--ch--hhhHHHHHHcCCCeEEEec
Q 015786 119 LNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGL--TL--ARKLPKLKESGLTSVNISL 194 (400)
Q Consensus 119 ~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~--ll--~~~~~~l~~~g~~~i~iSl 194 (400)
.+.+.+.++.+..+|...|.+..|+ ..+.++.+.+++. |+ .+.+.+... .. .+.+..+++.+-..+.+.+
T Consensus 90 ~~~~~~~i~~A~~lGa~~v~~~~~~----~~~~~l~~~a~~~-gv-~l~~En~~~~~~~~~~~~~~~ll~~~~~~~g~~~ 163 (262)
T 3p6l_A 90 SSDWEKMFKFAKAMDLEFITCEPAL----SDWDLVEKLSKQY-NI-KISVHNHPQPSDYWKPENLLKAISGRSQSLGSCS 163 (262)
T ss_dssp TTHHHHHHHHHHHTTCSEEEECCCG----GGHHHHHHHHHHH-TC-EEEEECCSSSSSSSSHHHHHHHHTTSCTTEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEecCCH----HHHHHHHHHHHHh-CC-EEEEEeCCCccccCCHHHHHHHHHhCCCceEEEe
Confidence 3456667777777777777776543 2345566666554 66 566665432 11 2344455543444667776
Q ss_pred CC
Q 015786 195 DT 196 (400)
Q Consensus 195 dg 196 (400)
|.
T Consensus 164 D~ 165 (262)
T 3p6l_A 164 DV 165 (262)
T ss_dssp EH
T ss_pred ch
Confidence 65
No 181
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=38.25 E-value=1.9e+02 Score=25.48 Aligned_cols=125 Identities=12% Similarity=0.054 Sum_probs=62.4
Q ss_pred HHHHHHHhCCCCEEEEECCCcc--ch-----hhHHHHHHHhhhcCCCceEEEEecC---------cchh-----------
Q 015786 124 RLAYLFVTSGVDKIRLTGGEPT--VR-----KDIEEACFHLSKLKGLKTLAMTTNG---------LTLA----------- 176 (400)
Q Consensus 124 ~ii~~~~~~g~~~i~~~GGEPl--l~-----~~l~~~i~~~~~~~g~~~~~i~TNG---------~ll~----------- 176 (400)
.+++.+++.|...|.|....|. .. .++.++.+.+.+ .|+ .+...+.+ ...+
T Consensus 39 ~~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gl-~i~~~~~~~~~~~~~~l~~~d~~~r~~~~~~~ 116 (316)
T 3qxb_A 39 LAGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRK-AGL-TIESTFGGLASYTYNHFLAPTLELQSLGYQHL 116 (316)
T ss_dssp HHHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHH-TTC-EEEEEECCHHHHTSCBTTCSSHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHH-cCC-eEEEeeccccccccccCCCCCHHHHHHHHHHH
Confidence 3455667899999999875443 11 134556666666 488 44433222 1111
Q ss_pred -hhHHHHHHcCCCeEEEecCCCCHHHHH-HhhcCCCHHHHHHHHHHHH----HcCCCc-EEEEEEEec---CCChhHHHH
Q 015786 177 -RKLPKLKESGLTSVNISLDTLVPAKFE-FLTRRKGHEKVMESINAAI----EVGYNP-VKVNCVVMR---GFNDDEICD 246 (400)
Q Consensus 177 -~~~~~l~~~g~~~i~iSldg~~~~~~~-~ir~~~~~~~v~~~i~~l~----~~g~~~-v~i~~~v~~---~~n~~el~~ 246 (400)
+.++...+.|...|.+.+-+.....+. .......++++.++++.+. +.|+ . +.+..+-.. ..+.+++.+
T Consensus 117 ~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv-~~l~lE~~~~~~~~~~t~~~~~~ 195 (316)
T 3qxb_A 117 KRAIDMTAAMEVPATGMPFGSYSAADALNPARREEIYAIARDMWIELAAYAKRQGL-SMLYVEPVPLATEFPSSAADAAR 195 (316)
T ss_dssp HHHHHHHHHTTCCEEEECCBBCCHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTC-CEEEECCCSCTTBSSCSHHHHHH
T ss_pred HHHHHHHHHcCCCEEEecCCCcCccccCCcccHHHHHHHHHHHHHHHHHHHHhcCC-eEEEEEecCCccccCCCHHHHHH
Confidence 122333456887787655442111110 0001112566666666554 4577 5 554431111 124566677
Q ss_pred HHHHH
Q 015786 247 FVELT 251 (400)
Q Consensus 247 l~~~~ 251 (400)
+++.+
T Consensus 196 l~~~v 200 (316)
T 3qxb_A 196 LMADL 200 (316)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77766
No 182
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=37.51 E-value=2.3e+02 Score=25.43 Aligned_cols=125 Identities=11% Similarity=0.032 Sum_probs=75.0
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEECCCccchh--hHHHHHHHhh---hcCCCceEEEEecCcchhhhHHHHHH--cCC
Q 015786 115 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRK--DIEEACFHLS---KLKGLKTLAMTTNGLTLARKLPKLKE--SGL 187 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~--~l~~~i~~~~---~~~g~~~~~i~TNG~ll~~~~~~l~~--~g~ 187 (400)
...+.+.+.+.+.++.+.|..-|.+.||.+.... ++.+++..+. +..++ .++|.|.= .+.++.-++ .|.
T Consensus 32 ~~~~~~~a~~~A~~~v~~GAdiIDIg~g~~~v~~~eem~rvv~~i~~~~~~~~v-pisIDT~~---~~V~eaaL~~~~Ga 107 (300)
T 3k13_A 32 NEKKYDEALSIARQQVEDGALVIDVNMDDGLLDARTEMTTFLNLIMSEPEIARV-PVMIDSSK---WEVIEAGLKCLQGK 107 (300)
T ss_dssp HTTCHHHHHHHHHHHHHTTCSEEEEECCCTTSCHHHHHHHHHHHHHTCHHHHTS-CEEEECSC---HHHHHHHHHHCSSC
T ss_pred hcCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHhhhcCCC-eEEEeCCC---HHHHHHHHHhcCCC
Confidence 3457899999999999999999999998776653 3555665554 32356 68888832 344555555 566
Q ss_pred CeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEE---ecCCChhH----HHHHHHHH-HhCCCe
Q 015786 188 TSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVV---MRGFNDDE----ICDFVELT-RDRPIN 257 (400)
Q Consensus 188 ~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v---~~~~n~~e----l~~l~~~~-~~~gv~ 257 (400)
. +.=|+.+...+ ++..+.+..+.++|. .+.+...- ++ .+.++ .+.+++.+ .+.|+.
T Consensus 108 ~-iINdIs~~~~d-----------~~~~~~~~l~a~~ga-~vV~mh~d~~G~p-~t~~~~~~i~~r~~~~~~~~~Gi~ 171 (300)
T 3k13_A 108 S-IVNSISLKEGE-----------EVFLEHARIIKQYGA-ATVVMAFDEKGQA-DTAARKIEVCERAYRLLVDKVGFN 171 (300)
T ss_dssp C-EEEEECSTTCH-----------HHHHHHHHHHHHHTC-EEEEESEETTEEC-CSHHHHHHHHHHHHHHHHHHTCCC
T ss_pred C-EEEeCCcccCC-----------hhHHHHHHHHHHhCC-eEEEEeeCCCCCC-CCHHHHHHHHHHHHHHHHHHcCCC
Confidence 4 55566663200 122244556667887 55444331 22 24443 34455554 678884
No 183
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=37.43 E-value=1.7e+02 Score=26.06 Aligned_cols=130 Identities=18% Similarity=0.239 Sum_probs=72.2
Q ss_pred CHHHHHHHHHHHHhCCCCEEE---EECCCccchhhHHHHHHHhhhcCCCceEEEEecCcch-------hhhH-HHHHHcC
Q 015786 118 SLNEILRLAYLFVTSGVDKIR---LTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-------ARKL-PKLKESG 186 (400)
Q Consensus 118 s~e~i~~ii~~~~~~g~~~i~---~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll-------~~~~-~~l~~~g 186 (400)
+.++..++++.+.+.|+..|. .+|-|.. +-+.++...- .-..+.|+|-.... .+.+ ..|...|
T Consensus 45 ~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~----lG~al~~~~~--~R~~v~I~TK~~~~~~~~~~i~~~~e~SL~rLg 118 (298)
T 3up8_A 45 SGAEVLRILPQALKLGFRHVDTAQIYGNEAE----VGEAIQKSGI--PRADVFLTTKVWVDNYRHDAFIASVDESLRKLR 118 (298)
T ss_dssp CHHHHHHHHHHHHHHTCCEEECCTTTTCHHH----HHHHHHHHTC--CGGGCEEEEEECGGGCSHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEECCCcccCHHH----HHHHHHHcCC--ChHHEEEEeccCCCCCCHHHHHHHHHHHHHHhC
Confidence 457888999999899987776 3453322 3444443210 01145677754321 1223 3455667
Q ss_pred CCeEEEec-CCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCCCeEEEEeeec
Q 015786 187 LTSVNISL-DTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINIRFIEFMP 265 (400)
Q Consensus 187 ~~~i~iSl-dg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~~~~~~~~p 265 (400)
.++|-+=+ ..+++. ..++.++++++.+++.|. |+.+=..+++.+++.++++... ..+.+..+++.|
T Consensus 119 ~dyiDl~llH~p~~~--------~~~~e~~~al~~l~~~Gk----ir~iGvSn~~~~~l~~~~~~~~-~~~~~~Q~~~~~ 185 (298)
T 3up8_A 119 TDHVDLLLLHWPGSD--------VPMAERIGALNEVRNAGK----VRHIGISNFNTTQMEEAARLSD-APIATNQVEYHP 185 (298)
T ss_dssp SSCEEEEEESCSCCS--------SCHHHHHHHHHHHHHTTS----EEEEEEESCCHHHHHHHHHHCS-SCEEEEEEECBT
T ss_pred CCcEEEEEEccCCCC--------CCHHHHHHHHHHHHHcCC----ccEEEEcCCCHHHHHHHHHhCC-CCceEEEEeccc
Confidence 76665433 222221 147889999999999987 3333222467777777766432 123344455555
Q ss_pred C
Q 015786 266 F 266 (400)
Q Consensus 266 ~ 266 (400)
+
T Consensus 186 ~ 186 (298)
T 3up8_A 186 Y 186 (298)
T ss_dssp T
T ss_pred c
Confidence 4
No 184
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=37.29 E-value=2.1e+02 Score=24.94 Aligned_cols=59 Identities=14% Similarity=0.173 Sum_probs=27.9
Q ss_pred EEEEecCcch----hhhHHHHHHcCCCeEEEec-------CCCC-H-HHHHHhhcCCCHHHHHHHHHHHHHc
Q 015786 166 LAMTTNGLTL----ARKLPKLKESGLTSVNISL-------DTLV-P-AKFEFLTRRKGHEKVMESINAAIEV 224 (400)
Q Consensus 166 ~~i~TNG~ll----~~~~~~l~~~g~~~i~iSl-------dg~~-~-~~~~~ir~~~~~~~v~~~i~~l~~~ 224 (400)
+...|+|..- .+.+..|.+.|.+.|.+.+ ||+. + .....+..+-+.+..++.++.+++.
T Consensus 20 i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~ 91 (268)
T 1qop_A 20 VPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREK 91 (268)
T ss_dssp EEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred EEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc
Confidence 3444666542 1234555566677666655 3311 0 0111223333356666666666655
No 185
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=37.16 E-value=1.2e+02 Score=28.54 Aligned_cols=82 Identities=21% Similarity=0.349 Sum_probs=52.6
Q ss_pred CCCCCCHHHHHHHHHH-H-------HhCCCCEEEEECCC---------ccch-------------hh-HHHHHHHhhhcC
Q 015786 113 KPQLLSLNEILRLAYL-F-------VTSGVDKIRLTGGE---------PTVR-------------KD-IEEACFHLSKLK 161 (400)
Q Consensus 113 ~~~~~s~e~i~~ii~~-~-------~~~g~~~i~~~GGE---------Pll~-------------~~-l~~~i~~~~~~~ 161 (400)
..+.|+.++|.++++. + .+.|...|.++||. |..+ .. +.++++.+++.-
T Consensus 153 ~pr~lt~~eI~~ii~~~~~~aa~~a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~ 232 (407)
T 3tjl_A 153 PVRALTTQEVKDLVYEAYTNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIV 232 (407)
T ss_dssp CCEECCHHHHHHHHHTHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHh
Confidence 3567999999999988 4 35799999999988 7653 12 367777776543
Q ss_pred CCc--eEEEEec----Ccchh-----------hhHHHH---HHcC--CCeEEEec
Q 015786 162 GLK--TLAMTTN----GLTLA-----------RKLPKL---KESG--LTSVNISL 194 (400)
Q Consensus 162 g~~--~~~i~TN----G~ll~-----------~~~~~l---~~~g--~~~i~iSl 194 (400)
+-. .+.|... |...+ ..+..| .+.| +++|.|+-
T Consensus 233 ~~~~v~~r~~~~~~~~g~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~ 287 (407)
T 3tjl_A 233 GADKIGIRISPWATFQNMKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVE 287 (407)
T ss_dssp CGGGEEEEECTTCCGGGCCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEEC
T ss_pred CCCeEEEEECcccccCCCcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEc
Confidence 311 2333321 11111 223566 6678 99999984
No 186
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=37.13 E-value=78 Score=29.80 Aligned_cols=83 Identities=16% Similarity=0.293 Sum_probs=52.6
Q ss_pred CCCCCCHHHHHHHHHHH-------HhCCCCEEEEECCC---------ccch-------------hh-HHHHHHHhhhcCC
Q 015786 113 KPQLLSLNEILRLAYLF-------VTSGVDKIRLTGGE---------PTVR-------------KD-IEEACFHLSKLKG 162 (400)
Q Consensus 113 ~~~~~s~e~i~~ii~~~-------~~~g~~~i~~~GGE---------Pll~-------------~~-l~~~i~~~~~~~g 162 (400)
..+.|+.++|.++++.+ .+.|.+.|.|.+|. |..+ .. +.++++.+++.-+
T Consensus 157 ~p~~mt~~eI~~ii~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg 236 (402)
T 2hsa_B 157 KPRAIGTYEISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIG 236 (402)
T ss_dssp CCEECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHC
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhC
Confidence 35679998888887765 35789999999875 6643 22 4688888876433
Q ss_pred CceEEEEecCc----------chh---hhHHHHHHcC------CCeEEEecC
Q 015786 163 LKTLAMTTNGL----------TLA---RKLPKLKESG------LTSVNISLD 195 (400)
Q Consensus 163 ~~~~~i~TNG~----------ll~---~~~~~l~~~g------~~~i~iSld 195 (400)
-..|.+--+.. .++ +.++.|.+.| ++.|.+|--
T Consensus 237 ~~~V~vRls~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~ 288 (402)
T 2hsa_B 237 ADRVGVRVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQP 288 (402)
T ss_dssp GGGEEEEECSSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECC
T ss_pred CCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecC
Confidence 11233332221 111 2346677788 999999853
No 187
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=37.05 E-value=1.1e+02 Score=28.20 Aligned_cols=73 Identities=11% Similarity=0.019 Sum_probs=47.2
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccc--h--------hhHHHHHHHhhhcC-CCceEEEEecCcch-hhhHHHHHH
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTV--R--------KDIEEACFHLSKLK-GLKTLAMTTNGLTL-ARKLPKLKE 184 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll--~--------~~l~~~i~~~~~~~-g~~~~~i~TNG~ll-~~~~~~l~~ 184 (400)
.+.++...+++.+.+.|+..|.++|+.... . +-..+++..+++.. ++ -|..||-.. .+.+..+++
T Consensus 141 ~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~i---PVianGgI~s~eda~~~l~ 217 (350)
T 3b0p_A 141 ETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQL---TFVTNGGIRSLEEALFHLK 217 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTS---EEEEESSCCSHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCC---eEEEECCcCCHHHHHHHHh
Confidence 346677888888888999999999865321 1 01235566666543 33 455666554 466777776
Q ss_pred cCCCeEEEe
Q 015786 185 SGLTSVNIS 193 (400)
Q Consensus 185 ~g~~~i~iS 193 (400)
|.+.|.|.
T Consensus 218 -GaD~V~iG 225 (350)
T 3b0p_A 218 -RVDGVMLG 225 (350)
T ss_dssp -TSSEEEEC
T ss_pred -CCCEEEEC
Confidence 88888886
No 188
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=36.94 E-value=3.2e+02 Score=26.94 Aligned_cols=121 Identities=12% Similarity=0.053 Sum_probs=71.0
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccch--hhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHc--CCCeEEE
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVR--KDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKES--GLTSVNI 192 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~--~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~--g~~~i~i 192 (400)
.+.+.+.+...++.+.|..-|.+.=|.+... .++.+++..+++..++ .++|.|.= .+.++.-++. |.. +.=
T Consensus 337 ~~~~~a~~~A~~~v~~GAdiIDIgpg~~~v~~~ee~~rvv~~i~~~~~v-pisIDT~~---~~v~eaal~~~~G~~-iIN 411 (566)
T 1q7z_A 337 GNEEIVIKEAKTQVEKGAEVLDVNFGIESQIDVRYVEKIVQTLPYVSNV-PLSLDIQN---VDLTERALRAYPGRS-LFN 411 (566)
T ss_dssp TCCHHHHHHHHHHHHTTCSEEEEECSSGGGSCHHHHHHHHHHHHHHTCS-CEEEECCC---HHHHHHHHHHCSSCC-EEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHhhCCc-eEEEeCCC---HHHHHHHHHhcCCCC-EEE
Confidence 4678888888888899988888774554333 2367777777665466 68888742 3445555555 653 444
Q ss_pred ecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEE--ecCCCh----hHHHHHHHHHHhCCCe
Q 015786 193 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVV--MRGFND----DEICDFVELTRDRPIN 257 (400)
Q Consensus 193 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v--~~~~n~----~el~~l~~~~~~~gv~ 257 (400)
|+.+.+ +. |+.+ +..+.++|. .+.+...- ++ .+. +.+.+.++.+.+.|+.
T Consensus 412 dis~~~-~~---------~~~~---~~~~~~~g~-~vV~m~~~~~~p-~t~~~~~~~l~~~~~~a~~~Gi~ 467 (566)
T 1q7z_A 412 SAKVDE-EE---------LEMK---INLLKKYGG-TLIVLLMGKDVP-KSFEERKEYFEKALKILERHDFS 467 (566)
T ss_dssp EEESCH-HH---------HHHH---HHHHHHHCC-EEEEESCSSSCC-CSHHHHHHHHHHHHHHHHHTTCG
T ss_pred ECCcch-hh---------HHHH---HHHHHHhCC-eEEEEeCCCCCc-CCHHHHHHHHHHHHHHHHHCCCC
Confidence 555531 11 2333 344556676 54443322 12 233 3456677777778875
No 189
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=36.68 E-value=2.6e+02 Score=25.85 Aligned_cols=118 Identities=15% Similarity=0.197 Sum_probs=64.6
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEE---C-CCccchhhHHHHHHHhhhcCC----CceEEEEe---cCcchhhhHHHHHHc
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLT---G-GEPTVRKDIEEACFHLSKLKG----LKTLAMTT---NGLTLARKLPKLKES 185 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~---G-GEPll~~~l~~~i~~~~~~~g----~~~~~i~T---NG~ll~~~~~~l~~~ 185 (400)
.+++.+.++++.+.+.|...|.|- | +-|.- +.++++.+++.-+ + .+.+.+ -|.-+-. ...-.++
T Consensus 154 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~---~~~lv~~l~~~~~~~~~~-~l~~H~Hnd~GlAvAN-~laAv~a 228 (370)
T 3rmj_A 154 SEIDFLAEICGAVIEAGATTINIPDTVGYSIPYK---TEEFFRELIAKTPNGGKV-VWSAHCHNDLGLAVAN-SLAALKG 228 (370)
T ss_dssp SCHHHHHHHHHHHHHHTCCEEEEECSSSCCCHHH---HHHHHHHHHHHSTTGGGS-EEEEECBCTTSCHHHH-HHHHHHT
T ss_pred cCHHHHHHHHHHHHHcCCCEEEecCccCCcCHHH---HHHHHHHHHHhCCCcCce-EEEEEeCCCCChHHHH-HHHHHHh
Confidence 466777777777777777777774 3 34432 4455555544322 3 455554 2322222 2233356
Q ss_pred CCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHH-HcCCCcEEEEEEEecCCChhHHHHHHHHHHh
Q 015786 186 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAI-EVGYNPVKVNCVVMRGFNDDEICDFVELTRD 253 (400)
Q Consensus 186 g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~-~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~ 253 (400)
|.+.|..|+.|..+ -.|....+.++-+++... ..|+ . .|.+.+.+.++.+++.+
T Consensus 229 Ga~~vd~tv~GlGe-----raGN~~lE~vv~~L~~~~~~~g~-~--------tgidl~~L~~~s~~v~~ 283 (370)
T 3rmj_A 229 GARQVECTVNGLGE-----RAGNASVEEIVMALKVRHDLFGL-E--------TGIDTTQIVPSSKLVST 283 (370)
T ss_dssp TCCEEEEBGGGCSS-----TTCBCBHHHHHHHHHHTHHHHCC-B--------CCCCGGGHHHHHHHHHH
T ss_pred CCCEEEEeccccCc-----ccccccHHHHHHHHHhhhhccCC-C--------CCcCHHHHHHHHHHHHH
Confidence 77788888877653 122223777776665432 2355 1 24566667666666655
No 190
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=36.44 E-value=2.1e+02 Score=24.73 Aligned_cols=127 Identities=12% Similarity=0.126 Sum_probs=79.6
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEec---Ccchh----hhHHHHHHcCCC
Q 015786 116 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTN---GLTLA----RKLPKLKESGLT 188 (400)
Q Consensus 116 ~~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TN---G~ll~----~~~~~l~~~g~~ 188 (400)
..+.+++.+++++..++++..|++ +|.+........+..++ .+...++ |...+ .+.+..++.|.+
T Consensus 39 ~~t~~~i~~lc~eA~~~~~~aVcV-------~p~~v~~a~~~L~~s~v-~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAd 110 (239)
T 3ngj_A 39 DATEEQIRKLCSEAAEYKFASVCV-------NPTWVPLCAELLKGTGV-KVCTVIGFPLGATPSEVKAYETKVAVEQGAE 110 (239)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEEE-------CGGGHHHHHHHHTTSSC-EEEEEESTTTCCSCHHHHHHHHHHHHHTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEE-------CHHHHHHHHHHhCCCCC-eEEEEeccCCCCCchHHHHHHHHHHHHcCCC
Confidence 568999999999999999888886 34443333332222355 4544442 22121 234556677999
Q ss_pred eEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecC-CChhHHHHHHHHHHhCCCeE
Q 015786 189 SVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRG-FNDDEICDFVELTRDRPINI 258 (400)
Q Consensus 189 ~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~-~n~~el~~l~~~~~~~gv~~ 258 (400)
.|.+-++-. . +. .+.++.+.+-|..+.+.-- ...+.+++-.+ .+++++....+.+.+.|.++
T Consensus 111 EIDmViNig--~----lk-~g~~~~v~~eI~~v~~a~~-~~~lKVIlEt~~Lt~eei~~a~~ia~~aGADf 173 (239)
T 3ngj_A 111 EVDMVINIG--M----VK-AKKYDDVEKDVKAVVDASG-KALTKVIIECCYLTNEEKVEVCKRCVAAGAEY 173 (239)
T ss_dssp EEEEECCHH--H----HH-TTCHHHHHHHHHHHHHHHT-TSEEEEECCGGGSCHHHHHHHHHHHHHHTCSE
T ss_pred EEEEEeehH--H----hc-cccHHHHHHHHHHHHHHhc-CCceEEEEecCCCCHHHHHHHHHHHHHHCcCE
Confidence 888887642 1 11 2458888888888887611 11233333222 47788999999999988864
No 191
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1
Probab=36.38 E-value=2.3e+02 Score=25.17 Aligned_cols=129 Identities=16% Similarity=0.152 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHhCCCCEEEE---ECCCccchhhHHHHHHHhhhcCCC--ceEEEEecCcc-------hhhhH-HHHHHc
Q 015786 119 LNEILRLAYLFVTSGVDKIRL---TGGEPTVRKDIEEACFHLSKLKGL--KTLAMTTNGLT-------LARKL-PKLKES 185 (400)
Q Consensus 119 ~e~i~~ii~~~~~~g~~~i~~---~GGEPll~~~l~~~i~~~~~~~g~--~~~~i~TNG~l-------l~~~~-~~l~~~ 185 (400)
.++..++++.+.+.|+..|.- +|.|.. +-+.++...+..++ ..+.|+|-... +.+.+ ..|...
T Consensus 38 ~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~----vG~al~~~~~~~~~~R~~v~I~TK~~~~~~~~~~v~~~~~~SL~rL 113 (298)
T 1vp5_A 38 PEKTEECVYEAIKVGYRLIDTAASYMNEEG----VGRAIKRAIDEGIVRREELFVTTKLWVSDVGYESTKKAFEKSLKKL 113 (298)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCGGGTCHHH----HHHHHHHHHHTTSCCGGGCEEEEEECGGGCSSHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCEEECCCcccCHHH----HHHHHHHhhhccCCChhhEEEEeccCCCCCCHHHHHHHHHHHHHHH
Confidence 478888999888999776653 454433 34444432100111 14667775321 12233 445566
Q ss_pred CCCeEEEec-CCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCCCeEEEEeee
Q 015786 186 GLTSVNISL-DTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINIRFIEFM 264 (400)
Q Consensus 186 g~~~i~iSl-dg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~~~~~~~~ 264 (400)
|.++|-+=+ ..+++ .++.+++.++.+++.|. |+.+=..+++.+++.++++... ....+..+++.
T Consensus 114 g~dyiDl~llH~p~~----------~~~e~~~al~~l~~~Gk----ir~iGvSn~~~~~l~~~~~~~~-~~p~v~Q~~~~ 178 (298)
T 1vp5_A 114 QLEYIDLYLIHQPFG----------DVHCAWKAMEEMYKDGL----VRAIGVSNFYPDRLMDLMVHHE-IVPAVNQIEIH 178 (298)
T ss_dssp TCSCEEEEEECSSCS----------CHHHHHHHHHHHHHTTS----EEEEEEESCCHHHHHHHHHHCS-SCCSEEEEECB
T ss_pred CCCcEEEEEecCCCC----------CHHHHHHHHHHHHHcCC----ccEEEecCCCHHHHHHHHHhCC-CCceEEEEecc
Confidence 777666443 22221 46788889999998886 2332222456667777666532 12245555565
Q ss_pred cC
Q 015786 265 PF 266 (400)
Q Consensus 265 p~ 266 (400)
|+
T Consensus 179 ~~ 180 (298)
T 1vp5_A 179 PF 180 (298)
T ss_dssp TT
T ss_pred cc
Confidence 54
No 192
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=36.10 E-value=1.9e+02 Score=26.39 Aligned_cols=75 Identities=19% Similarity=0.259 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHhCCCCEEEEECCCccc-------------hhh-HHHHHHHhhhcCCCceEEEEec-Ccc-------hh
Q 015786 119 LNEILRLAYLFVTSGVDKIRLTGGEPTV-------------RKD-IEEACFHLSKLKGLKTLAMTTN-GLT-------LA 176 (400)
Q Consensus 119 ~e~i~~ii~~~~~~g~~~i~~~GGEPll-------------~~~-l~~~i~~~~~~~g~~~~~i~TN-G~l-------l~ 176 (400)
++.+.+.++.+.+.|...|.+.+|-|.- +++ +.++++.+++.-++ .+.+-+. |.. ..
T Consensus 69 p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~-PV~vKiR~g~~~~~~~~~~~ 147 (350)
T 3b0p_A 69 PKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRV-PVTVKMRLGLEGKETYRGLA 147 (350)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSS-CEEEEEESCBTTCCCHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCC-ceEEEEecCcCccccHHHHH
Confidence 5888888888888999999999877753 234 46788888765455 4555221 221 12
Q ss_pred hhHHHHHHcCCCeEEEec
Q 015786 177 RKLPKLKESGLTSVNISL 194 (400)
Q Consensus 177 ~~~~~l~~~g~~~i~iSl 194 (400)
+.+..+.+.|++.|.|+-
T Consensus 148 ~~a~~l~~aG~d~I~V~~ 165 (350)
T 3b0p_A 148 QSVEAMAEAGVKVFVVHA 165 (350)
T ss_dssp HHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHcCCCEEEEec
Confidence 345778889999999873
No 193
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=36.07 E-value=1.8e+02 Score=23.86 Aligned_cols=77 Identities=29% Similarity=0.223 Sum_probs=50.6
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcC--CCceEEEEecCcchhhhHHHHHHcCCCeEEEe
Q 015786 116 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLK--GLKTLAMTTNGLTLARKLPKLKESGLTSVNIS 193 (400)
Q Consensus 116 ~~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~--g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~iS 193 (400)
..+.+++.++++.+.+.|+..|.++-+.| +..+.++.+++.. +. .+.+.|- ...+.+....+.|.+.| ++
T Consensus 18 ~~~~~~~~~~~~~~~~~G~~~iev~~~~~----~~~~~i~~ir~~~~~~~-~ig~~~v--~~~~~~~~a~~~Gad~i-v~ 89 (205)
T 1wa3_A 18 ANSVEEAKEKALAVFEGGVHLIEITFTVP----DADTVIKELSFLKEKGA-IIGAGTV--TSVEQCRKAVESGAEFI-VS 89 (205)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEEETTST----THHHHHHHTHHHHHTTC-EEEEESC--CSHHHHHHHHHHTCSEE-EC
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEeCCCh----hHHHHHHHHHHHCCCCc-EEEeccc--CCHHHHHHHHHcCCCEE-Ec
Confidence 46789999999999999999998887655 3345566665532 33 4554331 12355777778899999 66
Q ss_pred cCCCCHHH
Q 015786 194 LDTLVPAK 201 (400)
Q Consensus 194 ldg~~~~~ 201 (400)
- ++.++.
T Consensus 90 ~-~~~~~~ 96 (205)
T 1wa3_A 90 P-HLDEEI 96 (205)
T ss_dssp S-SCCHHH
T ss_pred C-CCCHHH
Confidence 3 334433
No 194
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=36.00 E-value=2.2e+02 Score=24.86 Aligned_cols=129 Identities=12% Similarity=0.105 Sum_probs=69.5
Q ss_pred CHHHHHHHHHHHHhCCCCEEE---EECCCccchhhHHHHHHHhhhcCCCceEEEEecCcch-------hhhH-HHHHHcC
Q 015786 118 SLNEILRLAYLFVTSGVDKIR---LTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-------ARKL-PKLKESG 186 (400)
Q Consensus 118 s~e~i~~ii~~~~~~g~~~i~---~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll-------~~~~-~~l~~~g 186 (400)
+.++..++++.+.+.|+..|. .+|.|.. +-+.++... . .-..+.|+|-.... .+.+ ..|...|
T Consensus 29 ~~~~~~~~l~~Al~~G~~~~DTA~~Yg~E~~----lG~al~~~~-~-~R~~~~i~TK~~~~~~~~~~v~~~~~~SL~rLg 102 (276)
T 3f7j_A 29 NGNEATESVKAAIKNGYRSIDTAAIYKNEEG----VGIGIKESG-V-AREELFITSKVWNEDQGYETTLAAFEKSLERLQ 102 (276)
T ss_dssp TTHHHHHHHHHHHHTTCCEEECCGGGSCHHH----HHHHHHHHC-S-CGGGCEEEEEECGGGCSHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEECcCcccCHHH----HHHHHhhcC-C-CcccEEEEEeeCCCCCCHHHHHHHHHHHHHHhC
Confidence 357888899999999988776 4554333 233333211 0 01146677754221 1223 3455667
Q ss_pred CCeEEEec-CCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCCCeEEEEeeec
Q 015786 187 LTSVNISL-DTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINIRFIEFMP 265 (400)
Q Consensus 187 ~~~i~iSl-dg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~~~~~~~~p 265 (400)
.++|-+=+ +.+++. .++.+++.++.+++.|. |+.+=..+++.+++.++++... ....+..+++.|
T Consensus 103 ~dyiDl~~lH~p~~~---------~~~~~~~~l~~l~~~Gk----ir~iGvSn~~~~~l~~~~~~~~-~~~~~~Q~~~~~ 168 (276)
T 3f7j_A 103 LDYLDLYLIHWPGKD---------KYKDTWRALEKLYKDGK----IRAIGVSNFQVHHLEELLKDAE-IKPMVNQVEFHP 168 (276)
T ss_dssp CSCEEEEEESCCCSS---------SHHHHHHHHHHHHHTTS----EEEEEEESCCHHHHHHHHHHCS-SCCSEEEEECBT
T ss_pred CCeeEEEEEecCCCC---------cHHHHHHHHHHHHHcCC----ccEEEeccCCHHHHHHHHHhcC-CCceeeeeeecc
Confidence 77666443 222221 16788899999999986 2332222456667766655432 111244445544
Q ss_pred C
Q 015786 266 F 266 (400)
Q Consensus 266 ~ 266 (400)
.
T Consensus 169 ~ 169 (276)
T 3f7j_A 169 R 169 (276)
T ss_dssp T
T ss_pred c
Confidence 3
No 195
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=35.99 E-value=90 Score=25.07 Aligned_cols=26 Identities=27% Similarity=0.353 Sum_probs=20.2
Q ss_pred cchhhHHHHHHHhhhcCCCceEEEEecC
Q 015786 145 TVRKDIEEACFHLSKLKGLKTLAMTTNG 172 (400)
Q Consensus 145 ll~~~l~~~i~~~~~~~g~~~~~i~TNG 172 (400)
.+.|.+.++++.+++. |+ .+.|.||+
T Consensus 42 ~~~pg~~e~L~~L~~~-G~-~l~i~Tn~ 67 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKA-GY-KLVMITNQ 67 (176)
T ss_dssp CBCTTHHHHHHHHHHT-TE-EEEEEEEC
T ss_pred cCCccHHHHHHHHHHC-CC-EEEEEECC
Confidence 3457788888888874 77 68888887
No 196
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A*
Probab=35.95 E-value=2.3e+02 Score=24.96 Aligned_cols=120 Identities=9% Similarity=0.049 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHhCCCCEEE---EECCCccchhhHHHHHHHhhhcCCCceEEEEecCcch-------hhhH-HHHHHcCCC
Q 015786 120 NEILRLAYLFVTSGVDKIR---LTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-------ARKL-PKLKESGLT 188 (400)
Q Consensus 120 e~i~~ii~~~~~~g~~~i~---~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll-------~~~~-~~l~~~g~~ 188 (400)
++..++++.+.+.|+..|. .+|.|.. +-+.++... . .-..+.|+|-.... .+.+ ..|...|.+
T Consensus 35 ~~~~~~v~~Al~~G~~~~DTA~~Yg~E~~----vG~al~~~~-~-~R~~~~I~TK~~~~~~~~~~i~~~~~~SL~rLg~d 108 (288)
T 4f40_A 35 EVTENAVKWALCAGYRHIDTAAIYKNEES----VGAGLRASG-V-PREDVFITTKLWNTEQGYESTLAAFEESRQKLGVD 108 (288)
T ss_dssp HHHHHHHHHHHHTTCCEEECCGGGTCHHH----HHHHHHHHT-C-CGGGCEEEEEECGGGCSHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHcCCCeEECcccccCHHH----HHHHHHhcC-C-ChhhEEEEEecCCCcCCHHHHHHHHHHHHHHhCCC
Confidence 7788889988899988776 4554333 233333211 0 01146677753221 1223 345566777
Q ss_pred eEEEec-CCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHH
Q 015786 189 SVNISL-DTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVEL 250 (400)
Q Consensus 189 ~i~iSl-dg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~ 250 (400)
+|-+=+ +.+++..... .....+..++++++.+++.|. |+.+=..+++.+++.++++.
T Consensus 109 yiDl~llH~p~~~~~~~-~~~~~~~e~~~al~~l~~~Gk----ir~iGvSn~~~~~l~~~~~~ 166 (288)
T 4f40_A 109 YIDLYLIHWPRGKDILS-KEGKKYLDSWRAFEQLYKEKK----VRAIGVSNFHIHHLEDVLAM 166 (288)
T ss_dssp CEEEEEECCCCCHHHHH-HHCCHHHHHHHHHHHHHHTTS----EEEEEEESCCHHHHHHHHTT
T ss_pred cEEEEEEecCCCCcccc-cccccHHHHHHHHHHHHHcCC----ccEEEeccCCHHHHHHHHHh
Confidence 666543 2322211000 011236788999999999986 23222223555666655543
No 197
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=35.91 E-value=1.6e+02 Score=26.92 Aligned_cols=23 Identities=30% Similarity=0.381 Sum_probs=10.4
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEE
Q 015786 118 SLNEILRLAYLFVTSGVDKIRLT 140 (400)
Q Consensus 118 s~e~i~~ii~~~~~~g~~~i~~~ 140 (400)
+.++...+++.+.+.|+..|.++
T Consensus 237 ~~~~~~~la~~L~~~Gvd~i~vs 259 (349)
T 3hgj_A 237 SLEDTLAFARRLKELGVDLLDCS 259 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEe
Confidence 34444444444444444444444
No 198
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=35.82 E-value=1.5e+02 Score=24.62 Aligned_cols=111 Identities=19% Similarity=0.220 Sum_probs=57.9
Q ss_pred HHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCeEEE-ecCC-CCHHHHH
Q 015786 126 AYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNI-SLDT-LVPAKFE 203 (400)
Q Consensus 126 i~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~i-Sldg-~~~~~~~ 203 (400)
++.+.+.|...|.++++++ ....++++.+++. |. .+.+..+.....+.+..+.. +.+.|.+ +.+. .+...+
T Consensus 77 i~~~~~~gad~v~vh~~~~---~~~~~~~~~~~~~-g~-~i~~~~~~~t~~e~~~~~~~-~~d~vl~~~~~~g~~g~~~- 149 (220)
T 2fli_A 77 VEAFAQAGADIMTIHTEST---RHIHGALQKIKAA-GM-KAGVVINPGTPATALEPLLD-LVDQVLIMTVNPGFGGQAF- 149 (220)
T ss_dssp HHHHHHHTCSEEEEEGGGC---SCHHHHHHHHHHT-TS-EEEEEECTTSCGGGGGGGTT-TCSEEEEESSCTTCSSCCC-
T ss_pred HHHHHHcCCCEEEEccCcc---ccHHHHHHHHHHc-CC-cEEEEEcCCCCHHHHHHHHh-hCCEEEEEEECCCCccccc-
Confidence 3556677899999998776 3345666777664 65 56666654433344444433 3666654 4331 111111
Q ss_pred HhhcCCCHHHHHHHHHHHHH-cCCCcEEEEEEEecCCChhHHHHHHHH
Q 015786 204 FLTRRKGHEKVMESINAAIE-VGYNPVKVNCVVMRGFNDDEICDFVEL 250 (400)
Q Consensus 204 ~ir~~~~~~~v~~~i~~l~~-~g~~~v~i~~~v~~~~n~~el~~l~~~ 250 (400)
.....++ ++.++.+.. .+. . +.+.+..|.|.+++.++.+.
T Consensus 150 ---~~~~~~~-i~~~~~~~~~~~~-~--~~i~v~GGI~~~~~~~~~~~ 190 (220)
T 2fli_A 150 ---IPECLEK-VATVAKWRDEKGL-S--FDIEVDGGVDNKTIRACYEA 190 (220)
T ss_dssp ---CGGGHHH-HHHHHHHHHHTTC-C--CEEEEESSCCTTTHHHHHHH
T ss_pred ---CHHHHHH-HHHHHHHHHhcCC-C--ceEEEECcCCHHHHHHHHHc
Confidence 0011222 333443332 222 1 23456678888778776553
No 199
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=35.72 E-value=2.2e+02 Score=24.64 Aligned_cols=116 Identities=11% Similarity=0.151 Sum_probs=61.2
Q ss_pred HHHHHHhCCCCEEEEECCCcc-c-hhhHHHHHHHhhhcCCCceEEEEec---Cc--------------ch----------
Q 015786 125 LAYLFVTSGVDKIRLTGGEPT-V-RKDIEEACFHLSKLKGLKTLAMTTN---GL--------------TL---------- 175 (400)
Q Consensus 125 ii~~~~~~g~~~i~~~GGEPl-l-~~~l~~~i~~~~~~~g~~~~~i~TN---G~--------------ll---------- 175 (400)
.++.+++.|...|.+....+. + ..++.++.+.+++. |+ .+...+- |. .-
T Consensus 26 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~-gl-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~ 103 (290)
T 3tva_A 26 HLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAA-GI-QVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAE 103 (290)
T ss_dssp CHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHT-TC-EEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHH
T ss_pred HHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHc-CC-EEEEEeeccCCcccccccccccccCCCCHHHHHHHHHH
Confidence 466667899999999875442 2 23366777777774 88 4443321 10 00
Q ss_pred -hhhHHHHHHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHH----cCCCcEEEEEEEecCCChhHHHHHHHH
Q 015786 176 -ARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIE----VGYNPVKVNCVVMRGFNDDEICDFVEL 250 (400)
Q Consensus 176 -~~~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~----~g~~~v~i~~~v~~~~n~~el~~l~~~ 250 (400)
.+.++.....|...|.+.. |..++. ....++.+.+.++.+.+ .|+ .+.+... . .+.+++.++++.
T Consensus 104 ~~~~i~~a~~lG~~~v~~~~-G~~~~~-----~~~~~~~~~~~l~~l~~~a~~~Gv-~l~lE~~--~-~~~~~~~~l~~~ 173 (290)
T 3tva_A 104 MKEISDFASWVGCPAIGLHI-GFVPES-----SSPDYSELVRVTQDLLTHAANHGQ-AVHLETG--Q-ESADHLLEFIED 173 (290)
T ss_dssp HHHHHHHHHHHTCSEEEECC-CCCCCT-----TSHHHHHHHHHHHHHHHHHHTTTC-EEEEECC--S-SCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEcC-CCCccc-----chHHHHHHHHHHHHHHHHHHHcCC-EEEEecC--C-CCHHHHHHHHHh
Confidence 1122333456887777743 222211 11125666666665554 466 4444432 1 245566666665
Q ss_pred HH
Q 015786 251 TR 252 (400)
Q Consensus 251 ~~ 252 (400)
+.
T Consensus 174 ~~ 175 (290)
T 3tva_A 174 VN 175 (290)
T ss_dssp HC
T ss_pred cC
Confidence 53
No 200
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=35.71 E-value=2e+02 Score=24.20 Aligned_cols=64 Identities=16% Similarity=0.210 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCC
Q 015786 120 NEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLT 188 (400)
Q Consensus 120 e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~ 188 (400)
+++.+.+.+..+.|-..+.+++|+|+++--..++++.+.+. |+ .+.+.-.-+.+ ...+...|+.
T Consensus 81 ~~~~~~i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~~~~~-gi-~v~viPGiSs~---~aa~a~~g~p 144 (232)
T 2qbu_A 81 DSAARMVAAELEDGRDVAFITLGDPSIYSTFSYLQQRIEDM-GF-KTEMVPGVTSF---TACAATAGRT 144 (232)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESBCTTBSCSHHHHHHHHHHT-TC-CEEEECCCCHH---HHHHHHTTCC
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCCCccchhHHHHHHHHHHC-CC-cEEEeCCccHH---HHHHHHhCCC
Confidence 44444444444556677888999999987778888888875 77 67775543322 3344445543
No 201
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=35.69 E-value=59 Score=25.70 Aligned_cols=67 Identities=7% Similarity=0.128 Sum_probs=43.4
Q ss_pred CeEEEecCCCCHH-HHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCCCeEEEE
Q 015786 188 TSVNISLDTLVPA-KFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINIRFI 261 (400)
Q Consensus 188 ~~i~iSldg~~~~-~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~~~~~ 261 (400)
..|.+.+||.--. .+..+. .....++++|+.+++.|+ .+++..|.+...+..+.+++.++|+....+
T Consensus 4 k~i~~DlDGTL~~~~~~~i~--~~~~~~~~al~~l~~~G~-----~iii~TgR~~~~~~~~~~~l~~~gi~~~~I 71 (142)
T 2obb_A 4 MTIAVDFDGTIVEHRYPRIG--EEIPFAVETLKLLQQEKH-----RLILWSVREGELLDEAIEWCRARGLEFYAA 71 (142)
T ss_dssp CEEEECCBTTTBCSCTTSCC--CBCTTHHHHHHHHHHTTC-----EEEECCSCCHHHHHHHHHHHHTTTCCCSEE
T ss_pred eEEEEECcCCCCCCCCcccc--ccCHHHHHHHHHHHHCCC-----EEEEEeCCCcccHHHHHHHHHHcCCCeEEE
Confidence 4677888884211 010110 013578999999999998 344444556677889999999988865443
No 202
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=35.66 E-value=2.2e+02 Score=24.78 Aligned_cols=127 Identities=13% Similarity=0.090 Sum_probs=74.9
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcc--------hhhhHHHHHHcCCCe
Q 015786 118 SLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLT--------LARKLPKLKESGLTS 189 (400)
Q Consensus 118 s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~l--------l~~~~~~l~~~g~~~ 189 (400)
+.+++.+++++..+.|+..|.+. |.+.+... +.+ .++ -+.+.+...+ ....++..++.|.+.
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~-------~~~v~~~~-~~~-~~l-iv~~~~~~~~~g~~~~~~~~~~ve~Ai~~Ga~~ 108 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQ-------RGIAEKYY-DGS-VPL-ILKLNGKTTLYNGEPVSVANCSVEEAVSLGASA 108 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEEC-------HHHHHHHC-CSS-SCE-EEECEECCTTCCSSCCCEESSCHHHHHHTTCSE
T ss_pred chhhHHHHHHHHHhhCCCEEEEC-------HHHHHHhh-cCC-CcE-EEEEeCCCCcCCCCccchHHHHHHHHHHCCCCE
Confidence 67889999999999998898876 44444444 322 232 2444443322 124567888899998
Q ss_pred EEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCC------ChhHHHHHHHHHHhCCCeEEEEe
Q 015786 190 VNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGF------NDDEICDFVELTRDRPINIRFIE 262 (400)
Q Consensus 190 i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~------n~~el~~l~~~~~~~gv~~~~~~ 262 (400)
|++-+.-.+. .++.+ ++.+.+..+.+.+.|+ ++.+++ ...|. +.+++....+.+.+.|.++.-..
T Consensus 109 v~~~~nig~~-~~~~~-----~~~~~~v~~~~~~~~~-~vIi~~-~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt~ 179 (263)
T 1w8s_A 109 VGYTIYPGSG-FEWKM-----FEELARIKRDAVKFDL-PLVVES-FPRGGKVVNETAPEIVAYAARIALELGADAMKIK 179 (263)
T ss_dssp EEEEECTTST-THHHH-----HHHHHHHHHHHHHHTC-CEEEEE-CCCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred EEEEEecCCc-CHHHH-----HHHHHHHHHHHHHcCC-eEEEEe-eCCCCccccCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 8887633211 11111 2344444444556688 776653 22221 45667777788888888764444
No 203
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=35.59 E-value=94 Score=27.26 Aligned_cols=65 Identities=14% Similarity=0.272 Sum_probs=32.4
Q ss_pred HHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCeEEEe
Q 015786 126 AYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNIS 193 (400)
Q Consensus 126 i~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~iS 193 (400)
++++.++|+..|.=+||.|.....+..+-+.+.. .+ .-..+.--|. -.+.+..|...|+..+..|
T Consensus 134 le~L~~lG~~rILTSG~~~~a~~g~~~L~~Lv~~-a~-~i~Im~GgGv-~~~Ni~~l~~tGv~e~H~S 198 (256)
T 1twd_A 134 LNNLAELGIARVLTSGQKSDALQGLSKIMELIAH-RD-APIIMAGAGV-RAENLHHFLDAGVLEVHSS 198 (256)
T ss_dssp HHHHHHHTCCEEEECTTSSSTTTTHHHHHHHHTS-SS-CCEEEEESSC-CTTTHHHHHHHTCSEEEEC
T ss_pred HHHHHHcCCCEEECCCCCCCHHHHHHHHHHHHHh-hC-CcEEEecCCc-CHHHHHHHHHcCCCeEeEC
Confidence 4444556777777777777654333322222222 12 1122333332 2345555556677777766
No 204
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=35.05 E-value=1.5e+02 Score=27.31 Aligned_cols=70 Identities=10% Similarity=0.167 Sum_probs=45.3
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEC-C----------Cccchhh-HHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHH
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTG-G----------EPTVRKD-IEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKE 184 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~G-G----------EPll~~~-l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~ 184 (400)
-+.+++.+.+++..+.|...|.+.. | .+.+.++ +..+++.+++. |+ .+.+...+ ++.+...++
T Consensus 169 ~~~~~~~~~v~~~~~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~-g~-~v~~H~~~---~~~i~~~l~ 243 (423)
T 3feq_A 169 DGVEGVRLAVREEIQKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAA-NT-YVMAHAYT---GRAIARAVR 243 (423)
T ss_dssp CSHHHHHHHHHHHHHTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHT-TC-CEEEEEEE---HHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHC-CC-eEEEEeCC---hHHHHHHHH
Confidence 3578888888888788876666542 2 2244444 67888888875 77 56666553 234555566
Q ss_pred cCCCeEE
Q 015786 185 SGLTSVN 191 (400)
Q Consensus 185 ~g~~~i~ 191 (400)
.|.+.|.
T Consensus 244 ~g~~~i~ 250 (423)
T 3feq_A 244 CGVRTIE 250 (423)
T ss_dssp HTCCEEE
T ss_pred cCCCEEe
Confidence 6776554
No 205
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=34.81 E-value=1.2e+02 Score=27.96 Aligned_cols=83 Identities=19% Similarity=0.307 Sum_probs=51.8
Q ss_pred CCCCCCHHHHHHHHHHH-------HhCCCCEEEEECCC---------ccch-------------hh-HHHHHHHhhhcCC
Q 015786 113 KPQLLSLNEILRLAYLF-------VTSGVDKIRLTGGE---------PTVR-------------KD-IEEACFHLSKLKG 162 (400)
Q Consensus 113 ~~~~~s~e~i~~ii~~~-------~~~g~~~i~~~GGE---------Pll~-------------~~-l~~~i~~~~~~~g 162 (400)
..+.|+.++|..+++.+ .+.|...|.|.+|. |..+ .. +.++++.+++.-|
T Consensus 147 ~p~~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg 226 (364)
T 1vyr_A 147 TPRALELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWS 226 (364)
T ss_dssp CCEECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSC
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcC
Confidence 35668888888877655 35789999998864 4322 12 4678888876543
Q ss_pred CceEEE--EecC----c-----chh---hhHHHHHHcCCCeEEEecC
Q 015786 163 LKTLAM--TTNG----L-----TLA---RKLPKLKESGLTSVNISLD 195 (400)
Q Consensus 163 ~~~~~i--~TNG----~-----ll~---~~~~~l~~~g~~~i~iSld 195 (400)
-..+.+ ..+. . .++ +.++.|.+.|++.|.++.-
T Consensus 227 ~~~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~ 273 (364)
T 1vyr_A 227 ADRIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSET 273 (364)
T ss_dssp GGGEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCcEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecC
Confidence 112333 4331 0 111 2346777889999999863
No 206
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=34.54 E-value=1.1e+02 Score=24.51 Aligned_cols=71 Identities=15% Similarity=0.145 Sum_probs=40.6
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCe
Q 015786 115 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTS 189 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~ 189 (400)
...+.+++.+.+. +.+..-|.++.--....+.+.++++.+++. +...+.|.--|...++....+.+.|.+.
T Consensus 54 ~~~p~e~lv~aa~---~~~~diV~lS~~~~~~~~~~~~~i~~L~~~-g~~~i~v~vGG~~~~~~~~~l~~~G~d~ 124 (161)
T 2yxb_A 54 LRQTPEQVAMAAV---QEDVDVIGVSILNGAHLHLMKRLMAKLREL-GADDIPVVLGGTIPIPDLEPLRSLGIRE 124 (161)
T ss_dssp SBCCHHHHHHHHH---HTTCSEEEEEESSSCHHHHHHHHHHHHHHT-TCTTSCEEEEECCCHHHHHHHHHTTCCE
T ss_pred CCCCHHHHHHHHH---hcCCCEEEEEeechhhHHHHHHHHHHHHhc-CCCCCEEEEeCCCchhcHHHHHHCCCcE
Confidence 3456777655444 566677777763333335567777777664 3211223334655666666677777763
No 207
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=34.54 E-value=2.8e+02 Score=25.54 Aligned_cols=115 Identities=17% Similarity=0.208 Sum_probs=62.8
Q ss_pred HHHHHHHhCCCCEEEEE--CCCccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCeEEEecCCCCHHH
Q 015786 124 RLAYLFVTSGVDKIRLT--GGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDTLVPAK 201 (400)
Q Consensus 124 ~ii~~~~~~g~~~i~~~--GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~iSldg~~~~~ 201 (400)
+.++.+.+.|+..|.+. .|+| ..+.+.++.+++..++ .+.+ .|.. ..+.+..+.+.|.+.|.++.....-..
T Consensus 108 e~a~~l~eaGad~I~ld~a~G~~---~~~~~~i~~i~~~~~~-~Viv-g~v~-t~e~A~~l~~aGaD~I~VG~~~Gs~~~ 181 (361)
T 3khj_A 108 ERAKLLVEAGVDVIVLDSAHGHS---LNIIRTLKEIKSKMNI-DVIV-GNVV-TEEATKELIENGADGIKVGIGPGSICT 181 (361)
T ss_dssp HHHHHHHHTTCSEEEECCSCCSB---HHHHHHHHHHHHHCCC-EEEE-EEEC-SHHHHHHHHHTTCSEEEECSSCCTTCC
T ss_pred HHHHHHHHcCcCeEEEeCCCCCc---HHHHHHHHHHHHhcCC-cEEE-ccCC-CHHHHHHHHHcCcCEEEEecCCCcCCC
Confidence 34555556788888773 2655 3456777777764455 3433 2221 236678899999999999754432222
Q ss_pred HHHhhcCC--CHHHHHHHHHHHHHcCCCcEEEEEEEecCC-ChhHHHHHHH
Q 015786 202 FEFLTRRK--GHEKVMESINAAIEVGYNPVKVNCVVMRGF-NDDEICDFVE 249 (400)
Q Consensus 202 ~~~ir~~~--~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~-n~~el~~l~~ 249 (400)
.+.+.+.+ .+..+.+..+.+.+.++ ++. ..-|. +.+++.+.+.
T Consensus 182 tr~~~g~g~p~~~~i~~v~~~~~~~~i-PVI----A~GGI~~~~di~kala 227 (361)
T 3khj_A 182 TRIVAGVGVPQITAIEKCSSVASKFGI-PII----ADGGIRYSGDIGKALA 227 (361)
T ss_dssp HHHHTCBCCCHHHHHHHHHHHHHHHTC-CEE----EESCCCSHHHHHHHHH
T ss_pred cccccCCCCCcHHHHHHHHHHHhhcCC-eEE----EECCCCCHHHHHHHHH
Confidence 22233322 24444444344444566 542 22233 4566666555
No 208
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=34.47 E-value=2.5e+02 Score=25.02 Aligned_cols=127 Identities=13% Similarity=0.107 Sum_probs=82.8
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHH-HHhhhcCCCceEEEEec---Ccch-h---hhHHHHHHcC
Q 015786 115 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEAC-FHLSKLKGLKTLAMTTN---GLTL-A---RKLPKLKESG 186 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i-~~~~~~~g~~~~~i~TN---G~ll-~---~~~~~l~~~g 186 (400)
...+.+++.+++++..+.|...|++. |.+...+ +.++. .++ .+...++ |... . .+.+..++.|
T Consensus 69 p~~T~~dI~~lc~eA~~~g~aaVCV~-------P~~V~~a~~~L~~-s~V-~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~G 139 (288)
T 3oa3_A 69 LSATGSQIDVLCAEAKEYGFATVCVR-------PDYVSRAVQYLQG-TQV-GVTCVIGFHEGTYSTDQKVSEAKRAMQNG 139 (288)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC-------GGGHHHHHHHTTT-SSC-EEEEEESTTTSCSCHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC-------HHHHHHHHHHcCC-CCC-eEEEEeCCCCCCCcHHHHHHHHHHHHHcC
Confidence 34689999999999999999999874 3333333 33433 355 4444443 3222 2 2346667889
Q ss_pred CCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecC-CChhHHHHHHHHHHhCCCeE
Q 015786 187 LTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRG-FNDDEICDFVELTRDRPINI 258 (400)
Q Consensus 187 ~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~-~n~~el~~l~~~~~~~gv~~ 258 (400)
.+.|.+-++-. .+ ..+.++.+.+-|..+++.--.+ .+.+++-.+ .+++++....+.+.+.|.++
T Consensus 140 AdEIDmVINig------~l-k~g~~~~v~~eI~~V~~a~~~~-~lKVIlEt~~Lt~eei~~A~~ia~eaGADf 204 (288)
T 3oa3_A 140 ASELDMVMNYP------WL-SEKRYTDVFQDIRAVRLAAKDA-ILKVILETSQLTADEIIAGCVLSSLAGADY 204 (288)
T ss_dssp CSEEEEECCHH------HH-HTTCHHHHHHHHHHHHHHTTTS-EEEEECCGGGCCHHHHHHHHHHHHHTTCSE
T ss_pred CCEEEEEeehh------hh-cCCcHHHHHHHHHHHHHHhcCC-CceEEEECCCCCHHHHHHHHHHHHHcCCCE
Confidence 99998887641 11 2245888888888888862213 244444332 47788888999999998875
No 209
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=34.39 E-value=2e+02 Score=26.61 Aligned_cols=137 Identities=12% Similarity=0.058 Sum_probs=79.9
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhc--CCCceEEEEecCcch-hh---hHHHHHHcCCCeE
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKL--KGLKTLAMTTNGLTL-AR---KLPKLKESGLTSV 190 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~--~g~~~~~i~TNG~ll-~~---~~~~l~~~g~~~i 190 (400)
.+.+++.+.+..+.+.|...|.+..|.+-+.. ..+.++.+++. .++ .+.+.-|+..- ++ .++.|.+.++++|
T Consensus 161 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~-~~e~v~avR~avg~d~-~l~vDan~~~~~~~a~~~~~~l~~~~i~~i 238 (393)
T 2og9_A 161 TPIDQLMVNASASIERGIGGIKLKVGQPDGAL-DIARVTAVRKHLGDAV-PLMVDANQQWDRPTAQRMCRIFEPFNLVWI 238 (393)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEECCCSCHHH-HHHHHHHHHHHHCTTS-CEEEECTTCCCHHHHHHHHHHHGGGCCSCE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCHHH-HHHHHHHHHHHcCCCC-EEEEECCCCCCHHHHHHHHHHHHhhCCCEE
Confidence 47888888888888889888888876543322 24556666653 245 68889997654 32 2345556788887
Q ss_pred EEecCCCCHHHHHHhhcC--------CCHHHHHHHHHHHHHcCCCcEEEEEEEec-CCChhHHHHHHHHHHhCCCeE
Q 015786 191 NISLDTLVPAKFEFLTRR--------KGHEKVMESINAAIEVGYNPVKVNCVVMR-GFNDDEICDFVELTRDRPINI 258 (400)
Q Consensus 191 ~iSldg~~~~~~~~ir~~--------~~~~~v~~~i~~l~~~g~~~v~i~~~v~~-~~n~~el~~l~~~~~~~gv~~ 258 (400)
.-.+...+-+.+..++.. .++. -.+.++.+.+.|.-. .++.-+.+ | -..+..+++++++..|+.+
T Consensus 239 E~P~~~~~~~~~~~l~~~~~iPIa~dE~~~-~~~~~~~~i~~~~~d-~v~ik~~~~G-Git~~~~i~~~A~~~gi~~ 312 (393)
T 2og9_A 239 EEPLDAYDHEGHAALALQFDTPIATGEMLT-SAAEHGDLIRHRAAD-YLMPDAPRVG-GITPFLKIASLAEHAGLML 312 (393)
T ss_dssp ECCSCTTCHHHHHHHHHHCSSCEEECTTCC-SHHHHHHHHHTTCCS-EECCCHHHHT-SHHHHHHHHHHHHHTTCEE
T ss_pred ECCCCcccHHHHHHHHHhCCCCEEeCCCcC-CHHHHHHHHHCCCCC-EEeeCccccC-CHHHHHHHHHHHHHcCCEE
Confidence 755554444555555431 1111 123444455555301 12221221 2 3567788888888888764
No 210
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=34.06 E-value=1.6e+02 Score=27.63 Aligned_cols=78 Identities=12% Similarity=0.051 Sum_probs=56.2
Q ss_pred CCHHHHHHHHHHHHh-----CCCCEEEEE----C------CCccch----hh-HHHHHHHhhhcCCCceEEEEecCc---
Q 015786 117 LSLNEILRLAYLFVT-----SGVDKIRLT----G------GEPTVR----KD-IEEACFHLSKLKGLKTLAMTTNGL--- 173 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~-----~g~~~i~~~----G------GEPll~----~~-l~~~i~~~~~~~g~~~~~i~TNG~--- 173 (400)
++.+.+++.++.+.+ .|...|.+= + |+...+ |+ +..+++++++. |+ .+.|-++..
T Consensus 23 ~~e~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~r~~~G~~~~~~~kFP~Gl~~l~~~i~~~-Gl-k~Giw~~pg~~t 100 (397)
T 3a5v_A 23 VDEQLILDAAKAIASSGLKDLGYNYVIIDDCWQKNERESSKTLLADPTKFPRGIKPLVDDIHNL-GL-KAGIYSSAGTLT 100 (397)
T ss_dssp CCHHHHHHHHHHHHHHTHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHHHHHHT-TC-EEEEEEESSSBC
T ss_pred CCHHHHHHHHHHHHHcCCcccCceEEEECCCcCCCCCCCCCCeEEChhcCCcCHHHHHHHHHHc-CC-EEEEEecCCCCc
Confidence 689999999998877 677777772 1 443333 44 89999999984 98 677766432
Q ss_pred ---------chhhhHHHHHHcCCCeEEEecCC
Q 015786 174 ---------TLARKLPKLKESGLTSVNISLDT 196 (400)
Q Consensus 174 ---------ll~~~~~~l~~~g~~~i~iSldg 196 (400)
.....++.+.+.|++.|.+..-.
T Consensus 101 c~~~pg~~~~~~~~~~~~~~wGvdyvK~D~~~ 132 (397)
T 3a5v_A 101 CGGHIASLGYEDIDAKTWAKWGIDYLKYDNCY 132 (397)
T ss_dssp TTSCBCCTTCHHHHHHHHHHHTCCEEEEECTT
T ss_pred cCCCHHHHHHHHHHHHHHHHcCCCEEEECCCc
Confidence 22345677888999999988643
No 211
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=34.05 E-value=2.8e+02 Score=25.53 Aligned_cols=96 Identities=10% Similarity=0.138 Sum_probs=64.2
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchh-hhHHHHHHcC-CCeEEEec
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLA-RKLPKLKESG-LTSVNISL 194 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~-~~~~~l~~~g-~~~i~iSl 194 (400)
++.++..++++.+.+.++.-|- ||+-..++.. ++.+++..++ -|.++..+.+ ..+..+++.+ ++.|++.+
T Consensus 205 ~~~~~A~~~~~~l~~~~i~~iE----qP~~~~d~~~-~~~l~~~~~i---PIa~dE~~~~~~~~~~~i~~~~~d~v~~k~ 276 (383)
T 3i4k_A 205 WDRRTALHYLPILAEAGVELFE----QPTPADDLET-LREITRRTNV---SVMADESVWTPAEALAVVKAQAADVIALKT 276 (383)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEE----SCSCTTCHHH-HHHHHHHHCC---EEEESTTCSSHHHHHHHHHHTCCSEEEECT
T ss_pred CCHHHHHHHHHHHHhcCCCEEE----CCCChhhHHH-HHHHHhhCCC---CEEecCccCCHHHHHHHHHcCCCCEEEEcc
Confidence 5788888888888888877665 7876544433 3444443233 4666666553 4566666554 67777765
Q ss_pred CCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEE
Q 015786 195 DTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVN 232 (400)
Q Consensus 195 dg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~ 232 (400)
.- .+++...++....+.+.|+ ++.+.
T Consensus 277 ~~-----------~GGit~~~~ia~~A~~~gi-~~~~~ 302 (383)
T 3i4k_A 277 TK-----------HGGLLESKKIAAIAEAGGL-ACHGA 302 (383)
T ss_dssp TT-----------TTSHHHHHHHHHHHHHTTC-EEEEC
T ss_pred cc-----------cCCHHHHHHHHHHHHHcCC-eEEeC
Confidence 33 3568999999999999998 65443
No 212
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=33.92 E-value=1.8e+02 Score=24.75 Aligned_cols=78 Identities=17% Similarity=0.140 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEECCC-c--cch--------hhHHHHHHHhhhcCCCceEEEEecCc---ch--hhhHHH
Q 015786 118 SLNEILRLAYLFVTSGVDKIRLTGGE-P--TVR--------KDIEEACFHLSKLKGLKTLAMTTNGL---TL--ARKLPK 181 (400)
Q Consensus 118 s~e~i~~ii~~~~~~g~~~i~~~GGE-P--ll~--------~~l~~~i~~~~~~~g~~~~~i~TNG~---ll--~~~~~~ 181 (400)
..+.+.+.++.+..+|...|.+.+|. | .-. ..+.++.+.+++ .|+ .+.+.+-.. ++ .+.+..
T Consensus 82 ~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~-~gv-~l~lEn~~~~~~~~~~~~~~~~ 159 (278)
T 1i60_A 82 IITEFKGMMETCKTLGVKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEP-YGV-KIALEFVGHPQCTVNTFEQAYE 159 (278)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHGG-GTC-EEEEECCCCTTBSSCSHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHh-cCC-EEEEEecCCccchhcCHHHHHH
Confidence 35677888888888999999887543 2 111 113455555555 488 788876543 22 244555
Q ss_pred HHH-cCCCeEEEecCCC
Q 015786 182 LKE-SGLTSVNISLDTL 197 (400)
Q Consensus 182 l~~-~g~~~i~iSldg~ 197 (400)
+++ .+-..+.+.+|..
T Consensus 160 l~~~~~~~~~g~~~D~~ 176 (278)
T 1i60_A 160 IVNTVNRDNVGLVLDSF 176 (278)
T ss_dssp HHHHHCCTTEEEEEEHH
T ss_pred HHHHhCCCCeeEEEEeE
Confidence 544 4555789998873
No 213
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=33.62 E-value=1.4e+02 Score=27.68 Aligned_cols=17 Identities=24% Similarity=0.110 Sum_probs=8.1
Q ss_pred HHHHHHHhhhcCCCceEE
Q 015786 150 IEEACFHLSKLKGLKTLA 167 (400)
Q Consensus 150 l~~~i~~~~~~~g~~~~~ 167 (400)
+.++++.+.+. |+..+.
T Consensus 252 ~~~~a~~l~~~-G~d~i~ 268 (365)
T 2gou_A 252 YTAAAALLNKH-RIVYLH 268 (365)
T ss_dssp HHHHHHHHHHT-TCSEEE
T ss_pred HHHHHHHHHHc-CCCEEE
Confidence 45555555543 553333
No 214
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=33.42 E-value=1.6e+02 Score=25.22 Aligned_cols=66 Identities=17% Similarity=0.205 Sum_probs=35.4
Q ss_pred HHHHHHHHhCCCCEEEEECCCcc--chhh---HHHHHHHhhhcCCCceEEEEecCcchhhhHHHHH-HcCCCeEEEe
Q 015786 123 LRLAYLFVTSGVDKIRLTGGEPT--VRKD---IEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLK-ESGLTSVNIS 193 (400)
Q Consensus 123 ~~ii~~~~~~g~~~i~~~GGEPl--l~~~---l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~-~~g~~~i~iS 193 (400)
.+.++++.++|+..|.=+||.+. .... +.+++++... .+ ..+.--| +-.+.+..+. ..|+..+..|
T Consensus 136 ~~ale~L~~lGv~rILTSG~~~~~~a~~g~~~L~~Lv~~a~~--ri--~Im~GgG-V~~~Ni~~l~~~tGv~e~H~s 207 (224)
T 2bdq_A 136 KKSIDQLVALGFTRILLHGSSNGEPIIENIKHIKALVEYANN--RI--EIMVGGG-VTAENYQYICQETGVKQAHGT 207 (224)
T ss_dssp HHHHHHHHHTTCCEEEECSCSSCCCGGGGHHHHHHHHHHHTT--SS--EEEECSS-CCTTTHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHHcCCCEEECCCCCCCCcHHHHHHHHHHHHHhhCC--Ce--EEEeCCC-CCHHHHHHHHHhhCCCEEccc
Confidence 33466666778888887787776 4332 3444443221 22 1232333 2335565555 4577777755
No 215
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=33.30 E-value=2.5e+02 Score=24.62 Aligned_cols=127 Identities=12% Similarity=0.100 Sum_probs=79.5
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEe---cCcchh----hhHHHHHHcCCC
Q 015786 116 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTT---NGLTLA----RKLPKLKESGLT 188 (400)
Q Consensus 116 ~~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~T---NG~ll~----~~~~~l~~~g~~ 188 (400)
..+.+++.+++++..+.++..|++ +|.+........+..++ .+.... .|...+ .+.+..++.|.+
T Consensus 55 ~~t~~~I~~lc~eA~~~~~aaVCV-------~p~~V~~a~~~L~gs~v-~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAd 126 (260)
T 3r12_A 55 FATPDDIKKLCLEARENRFHGVCV-------NPCYVKLAREELEGTDV-KVVTVVGFPLGANETRTKAHEAIFAVESGAD 126 (260)
T ss_dssp TCCHHHHHHHHHHHHHTTCSEEEE-------CGGGHHHHHHHHTTSCC-EEEEEESTTTCCSCHHHHHHHHHHHHHHTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEE-------CHHHHHHHHHHhcCCCC-eEEEEecCCCCCCcHHHHHHHHHHHHHcCCC
Confidence 568999999999999999888886 34443333332222355 343332 222221 234556677898
Q ss_pred eEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecC-CChhHHHHHHHHHHhCCCeE
Q 015786 189 SVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRG-FNDDEICDFVELTRDRPINI 258 (400)
Q Consensus 189 ~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~-~n~~el~~l~~~~~~~gv~~ 258 (400)
.|.+-++-. .+ ..+.++.+.+-|..+.+.-- ...+.+.+-.+ .+++++....+.+.+.|.++
T Consensus 127 EIDmViNig------~l-k~g~~~~v~~eI~~v~~a~~-~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADf 189 (260)
T 3r12_A 127 EIDMVINVG------ML-KAKEWEYVYEDIRSVVESVK-GKVVKVIIETCYLDTEEKIAACVISKLAGAHF 189 (260)
T ss_dssp EEEEECCHH------HH-HTTCHHHHHHHHHHHHHHTT-TSEEEEECCGGGCCHHHHHHHHHHHHHTTCSE
T ss_pred EEEEEeehh------hh-ccccHHHHHHHHHHHHHhcC-CCcEEEEEeCCCCCHHHHHHHHHHHHHhCcCE
Confidence 888877541 11 12458888888888887722 22344444322 47788999999999998874
No 216
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=33.08 E-value=2.4e+02 Score=24.39 Aligned_cols=115 Identities=15% Similarity=0.233 Sum_probs=69.5
Q ss_pred HHHHHHHHHHhCCCCEEEEE----------CCCccc-hhh-HHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCC
Q 015786 121 EILRLAYLFVTSGVDKIRLT----------GGEPTV-RKD-IEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLT 188 (400)
Q Consensus 121 ~i~~ii~~~~~~g~~~i~~~----------GGEPll-~~~-l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~ 188 (400)
++..++.+ .....|+|. ||==+. +.+ +.++++.+++. |+ .+++.-.. -.+.++.-.+.|.+
T Consensus 78 emi~ia~~---~kP~~vtLVPE~r~e~TTegGldv~~~~~~l~~~i~~L~~~-GI-rVSLFIDp--d~~qi~aA~~~GA~ 150 (243)
T 1m5w_A 78 EMLAIAVE---TKPHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDACKRLADA-GI-QVSLFIDA--DEEQIKAAAEVGAP 150 (243)
T ss_dssp HHHHHHHH---HCCSEEEECCCCSSCSSCCSCCCSGGGHHHHHHHHHHHHHT-TC-EEEEEECS--CHHHHHHHHHTTCS
T ss_pred HHHHHHHH---cCCCEEEECCCCCCCcCCCcchhHHhhHHHHHHHHHHHHHC-CC-EEEEEeCC--CHHHHHHHHHhCcC
Confidence 44455443 345567774 443332 233 68888888885 88 78876664 23667777788888
Q ss_pred eEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHH
Q 015786 189 SVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFV 248 (400)
Q Consensus 189 ~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~ 248 (400)
.|-+.--.+ .+.+........++++.++.+.+.+.|+ . +.-..|.|++.+..+.
T Consensus 151 ~IELhTG~Y-a~a~~~~~~~~el~~i~~aa~~A~~lGL-~----VnAGHgL~y~Nv~~ia 204 (243)
T 1m5w_A 151 FIEIHTGCY-ADAKTDAEQAQELARIAKAATFAASLGL-K----VNAGHGLTYHNVKAIA 204 (243)
T ss_dssp EEEEECHHH-HHCCSHHHHHHHHHHHHHHHHHHHHTTC-E----EEEESSCCTTTHHHHH
T ss_pred EEEEechhh-hcCCCchhHHHHHHHHHHHHHHHHHcCC-E----EecCCCCCHHHHHHHh
Confidence 877763221 1111101111237888888888888888 3 3344577888887774
No 217
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=32.98 E-value=1.7e+02 Score=24.88 Aligned_cols=43 Identities=19% Similarity=0.171 Sum_probs=27.3
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCc
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLK 164 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~ 164 (400)
+++++ .++.+++.|...|.+.+.. +...++.++.+.+++. |+.
T Consensus 18 ~~~~~---~l~~~~~~G~~~vEl~~~~-~~~~~~~~~~~~l~~~-gl~ 60 (275)
T 3qc0_A 18 CGFAE---AVDICLKHGITAIAPWRDQ-VAAIGLGEAGRIVRAN-GLK 60 (275)
T ss_dssp CCHHH---HHHHHHHTTCCEEECBHHH-HHHHCHHHHHHHHHHH-TCE
T ss_pred CCHHH---HHHHHHHcCCCEEEecccc-ccccCHHHHHHHHHHc-CCc
Confidence 45555 4555668899999887642 2223466777777764 773
No 218
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=32.84 E-value=2.5e+02 Score=24.72 Aligned_cols=88 Identities=13% Similarity=0.312 Sum_probs=54.0
Q ss_pred HHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcE
Q 015786 150 IEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPV 229 (400)
Q Consensus 150 l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v 229 (400)
+.++++.+++. |+ .+++.-.. -.+.++.-.+.|.+.|-+.--.+ .+.+..-.....++++.++.+.+.+.|+
T Consensus 144 L~~~i~~L~~~-GI-rVSLFIDp--d~~qI~aA~~~GAd~IELhTG~Y-A~a~~~~~~~~el~rl~~aA~~A~~lGL--- 215 (278)
T 3gk0_A 144 VRAACKQLADA-GV-RVSLFIDP--DEAQIRAAHETGAPVIELHTGRY-ADAHDAAEQQREFERIATGVDAGIALGL--- 215 (278)
T ss_dssp HHHHHHHHHHT-TC-EEEEEECS--CHHHHHHHHHHTCSEEEECCHHH-HTCSSHHHHHHHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHC-CC-EEEEEeCC--CHHHHHHHHHhCcCEEEEecchh-hccCCchhHHHHHHHHHHHHHHHHHcCC---
Confidence 67888888884 88 67776654 23566777777888777642111 0000000011127788888888888887
Q ss_pred EEEEEEecCCChhHHHHH
Q 015786 230 KVNCVVMRGFNDDEICDF 247 (400)
Q Consensus 230 ~i~~~v~~~~n~~el~~l 247 (400)
.+....|.|++.+..+
T Consensus 216 --~VnAGHGL~y~Nv~~i 231 (278)
T 3gk0_A 216 --KVNAGHGLHYTNVQAI 231 (278)
T ss_dssp --EEEECTTCCTTTHHHH
T ss_pred --EEecCCCCCHHHHHHH
Confidence 3334556788888766
No 219
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=32.82 E-value=2.7e+02 Score=24.98 Aligned_cols=71 Identities=10% Similarity=0.135 Sum_probs=41.5
Q ss_pred CCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHH-------cCCCcEEEEEEEecCCChhHHHHHHHHHHhCCCeE
Q 015786 186 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIE-------VGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINI 258 (400)
Q Consensus 186 g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~-------~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~~ 258 (400)
|.+.|.+.+-.+...-............+++.++.... .++ ++.+.+ .++.+.+++.++++.+.+.|++.
T Consensus 165 g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~-Pv~vKi--~~~~~~~~~~~~a~~l~~~Gvd~ 241 (336)
T 1f76_A 165 YAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYV-PIAVKI--APDLSEEELIQVADSLVRHNIDG 241 (336)
T ss_dssp GCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCC-CEEEEC--CSCCCHHHHHHHHHHHHHTTCSE
T ss_pred cCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccC-ceEEEe--cCCCCHHHHHHHHHHHHHcCCcE
Confidence 67777777655431101111111114556666665542 156 777773 45567778999999999999864
Q ss_pred E
Q 015786 259 R 259 (400)
Q Consensus 259 ~ 259 (400)
.
T Consensus 242 i 242 (336)
T 1f76_A 242 V 242 (336)
T ss_dssp E
T ss_pred E
Confidence 3
No 220
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=32.79 E-value=1.9e+02 Score=26.05 Aligned_cols=60 Identities=17% Similarity=0.326 Sum_probs=39.9
Q ss_pred HHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCeEEEe
Q 015786 123 LRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNIS 193 (400)
Q Consensus 123 ~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~iS 193 (400)
.+.++.+.+.|+..|.+.+|+| .++++.+++. ++ .+..... ..+....+.+.|.+.|.++
T Consensus 86 ~~~~~~~~~~g~d~V~~~~g~p------~~~~~~l~~~-gi-~vi~~v~---t~~~a~~~~~~GaD~i~v~ 145 (328)
T 2gjl_A 86 AEYRAAIIEAGIRVVETAGNDP------GEHIAEFRRH-GV-KVIHKCT---AVRHALKAERLGVDAVSID 145 (328)
T ss_dssp HHHHHHHHHTTCCEEEEEESCC------HHHHHHHHHT-TC-EEEEEES---SHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHhcCCCEEEEcCCCc------HHHHHHHHHc-CC-CEEeeCC---CHHHHHHHHHcCCCEEEEE
Confidence 3445556678999999999988 3566677764 66 3443321 1245667778899988873
No 221
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=32.71 E-value=2.3e+02 Score=24.03 Aligned_cols=71 Identities=8% Similarity=-0.039 Sum_probs=39.1
Q ss_pred HHHHHHHHHhCCCCEEEEECCC-cc-ch-hhHHHHHHHhhhcCCCceEEEEecC-cch---hhhHHHHHHcCCCeEEEe
Q 015786 122 ILRLAYLFVTSGVDKIRLTGGE-PT-VR-KDIEEACFHLSKLKGLKTLAMTTNG-LTL---ARKLPKLKESGLTSVNIS 193 (400)
Q Consensus 122 i~~ii~~~~~~g~~~i~~~GGE-Pl-l~-~~l~~~i~~~~~~~g~~~~~i~TNG-~ll---~~~~~~l~~~g~~~i~iS 193 (400)
+...++.+++.|...|.+.+.. |. .. .++.++.+.+++. |+....+.+.. ..+ .+.++.....|...|.+.
T Consensus 32 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~-gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~ 109 (257)
T 3lmz_A 32 LDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAH-KVTGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVGV 109 (257)
T ss_dssp HHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHT-TCEEEEEEEEEECSHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHc-CCeEEEEeccccCCHHHHHHHHHHHHHhCCCEEEec
Confidence 3445666678999999998753 21 12 2356677777764 88422232211 111 233344455677777764
No 222
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=32.44 E-value=1.9e+02 Score=26.05 Aligned_cols=80 Identities=14% Similarity=0.221 Sum_probs=49.0
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCCEEEEEC-----CCccch--hh---HHHHHHHhhhcCCCceEEEEecCcchhhhHHH
Q 015786 112 PKPQLLSLNEILRLAYLFVTSGVDKIRLTG-----GEPTVR--KD---IEEACFHLSKLKGLKTLAMTTNGLTLARKLPK 181 (400)
Q Consensus 112 ~~~~~~s~e~i~~ii~~~~~~g~~~i~~~G-----GEPll~--~~---l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~ 181 (400)
......+.+.+.+.+.++.+.|..-|.+.| |-+-.. .+ +..+|+.+++..++ .++|.|-= .+.++.
T Consensus 25 dgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~v-piSIDT~~---~~Va~a 100 (314)
T 2vef_A 25 DGGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESDV-LISIDTWK---SQVAEA 100 (314)
T ss_dssp -----CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCCC-EEEEECSC---HHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCCc-eEEEeCCC---HHHHHH
Confidence 445667899999999999999988777766 322222 12 55677777765566 68888732 355566
Q ss_pred HHHcCCCeEEEecCC
Q 015786 182 LKESGLTSVNISLDT 196 (400)
Q Consensus 182 l~~~g~~~i~iSldg 196 (400)
-+++|.+ +.=|+.|
T Consensus 101 Al~aGa~-iINDVsg 114 (314)
T 2vef_A 101 ALAAGAD-LVNDITG 114 (314)
T ss_dssp HHHTTCC-EEEETTT
T ss_pred HHHcCCC-EEEECCC
Confidence 6667774 4445555
No 223
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=32.41 E-value=1.5e+02 Score=21.97 Aligned_cols=92 Identities=16% Similarity=0.286 Sum_probs=52.3
Q ss_pred HHHHHHHhhhcCCCceEEEEecCcch--hhhHHHHHHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCC
Q 015786 150 IEEACFHLSKLKGLKTLAMTTNGLTL--ARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYN 227 (400)
Q Consensus 150 l~~~i~~~~~~~g~~~~~i~TNG~ll--~~~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~ 227 (400)
+.++++.++.. |+..+.+.+.---- .+.+..+-+.|++.-++ ..-+..-+||+.+-+.-.
T Consensus 15 lkeivreikrq-gvrvvllysdqdekrrrerleefekqgvdvrtv----------------edkedfrenireiweryp- 76 (162)
T 2l82_A 15 LKEIVREIKRQ-GVRVVLLYSDQDEKRRRERLEEFEKQGVDVRTV----------------EDKEDFRENIREIWERYP- 76 (162)
T ss_dssp HHHHHHHHHHT-TCEEEEEECCSCHHHHHHHHHHHHTTTCEEEEC----------------CSHHHHHHHHHHHHHHCT-
T ss_pred HHHHHHHHHhC-CeEEEEEecCchHHHHHHHHHHHHHcCCceeee----------------ccHHHHHHHHHHHHHhCC-
Confidence 46777888774 77333333322111 23456666666632211 112455667777766544
Q ss_pred cEEEEEEEecCCChhHHHHHHHHHHhCCCeEEE
Q 015786 228 PVKVNCVVMRGFNDDEICDFVELTRDRPINIRF 260 (400)
Q Consensus 228 ~v~i~~~v~~~~n~~el~~l~~~~~~~gv~~~~ 260 (400)
.+.+..+++. ...+=+.++++.+++.|+.+..
T Consensus 77 qldvvvivtt-ddkewikdfieeakergvevfv 108 (162)
T 2l82_A 77 QLDVVVIVTT-DDKEWIKDFIEEAKERGVEVFV 108 (162)
T ss_dssp TCCEEEEEEC-CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCcEEEEEec-CcHHHHHHHHHHHHhcCcEEEE
Confidence 4445555554 2556689999999999987543
No 224
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=32.33 E-value=1.1e+02 Score=28.37 Aligned_cols=22 Identities=32% Similarity=0.539 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHhCCCCEEEEE
Q 015786 119 LNEILRLAYLFVTSGVDKIRLT 140 (400)
Q Consensus 119 ~e~i~~ii~~~~~~g~~~i~~~ 140 (400)
.++...+++.+.+.|+..|.++
T Consensus 245 ~~~~~~la~~L~~~Gvd~i~vs 266 (363)
T 3l5l_A 245 LEESIELARRFKAGGLDLLSVS 266 (363)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEe
Confidence 3344444444444444444444
No 225
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=32.31 E-value=2.6e+02 Score=24.61 Aligned_cols=75 Identities=12% Similarity=0.171 Sum_probs=48.4
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCCEEEEEC-----CCccchh--h---HHHHHHHhhhcCCCceEEEEecCcchhhhHHH
Q 015786 112 PKPQLLSLNEILRLAYLFVTSGVDKIRLTG-----GEPTVRK--D---IEEACFHLSKLKGLKTLAMTTNGLTLARKLPK 181 (400)
Q Consensus 112 ~~~~~~s~e~i~~ii~~~~~~g~~~i~~~G-----GEPll~~--~---l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~ 181 (400)
......+.+.+.+-+.++.+.|..-|.+.| |-+.... + +..+++.+++ .++ .++|.|-= .+.++.
T Consensus 22 DGG~~~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~-~~v-~iSIDT~~---~~Va~~ 96 (270)
T 4hb7_A 22 DGGKFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVG-FDV-KISVDTFR---SEVAEA 96 (270)
T ss_dssp -----CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTT-SSS-EEEEECSC---HHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhc-CCC-eEEEECCC---HHHHHH
Confidence 345567888888888899999988888754 2222222 2 5567777766 467 78888742 455677
Q ss_pred HHHcCCCeEE
Q 015786 182 LKESGLTSVN 191 (400)
Q Consensus 182 l~~~g~~~i~ 191 (400)
-+++|.+.|+
T Consensus 97 al~aGa~iIN 106 (270)
T 4hb7_A 97 CLKLGVDMIN 106 (270)
T ss_dssp HHHHTCCEEE
T ss_pred HHHhccceec
Confidence 7788887665
No 226
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=31.80 E-value=1.9e+02 Score=23.75 Aligned_cols=74 Identities=20% Similarity=0.131 Sum_probs=48.5
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcC-CCceEEE---EecCcchhhhHHHHHHcCCCeEEE
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLK-GLKTLAM---TTNGLTLARKLPKLKESGLTSVNI 192 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~-g~~~~~i---~TNG~ll~~~~~~l~~~g~~~i~i 192 (400)
.+.++..++++.+.+ ++..+.+ |.|+...+=.++++.+++.. +. .+.+ ..| ..+..++.+.+.|.+.|.+
T Consensus 10 ~~~~~~~~~~~~~~~-~v~~iev--~~~~~~~~g~~~i~~l~~~~~~~-~i~~~l~~~d--i~~~~~~~a~~~Gad~v~v 83 (207)
T 3ajx_A 10 LSTEAALELAGKVAE-YVDIIEL--GTPLIKAEGLSVITAVKKAHPDK-IVFADMKTMD--AGELEADIAFKAGADLVTV 83 (207)
T ss_dssp SCHHHHHHHHHHHGG-GCSEEEE--CHHHHHHHCTHHHHHHHHHSTTS-EEEEEEEECS--CHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHhhc-cCCEEEE--CcHHHHhhCHHHHHHHHHhCCCC-eEEEEEEecC--ccHHHHHHHHhCCCCEEEE
Confidence 578899999998877 7777777 66654333245666666543 43 2332 233 1233468888999999999
Q ss_pred ecCC
Q 015786 193 SLDT 196 (400)
Q Consensus 193 Sldg 196 (400)
+...
T Consensus 84 h~~~ 87 (207)
T 3ajx_A 84 LGSA 87 (207)
T ss_dssp ETTS
T ss_pred eccC
Confidence 8766
No 227
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=31.77 E-value=2.2e+02 Score=26.04 Aligned_cols=96 Identities=14% Similarity=0.151 Sum_probs=52.5
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchh-hhHHHHHHcC-CCeEEEec
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLA-RKLPKLKESG-LTSVNISL 194 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~-~~~~~l~~~g-~~~i~iSl 194 (400)
++.++..++++.+.+.++..|- ||+-..++ +..+.+++..+ +-|.++..+.+ +.+..+++.+ ++.|++.+
T Consensus 199 ~~~~~a~~~~~~l~~~~i~~iE----qP~~~~~~-~~~~~l~~~~~---ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~ 270 (370)
T 1nu5_A 199 WDEQTASIWIPRLEEAGVELVE----QPVPRANF-GALRRLTEQNG---VAILADESLSSLSSAFELARDHAVDAFSLKL 270 (370)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEE----CCSCTTCH-HHHHHHHHHCS---SEEEESTTCCSHHHHHHHHHTTCCSEEEECH
T ss_pred CCHHHHHHHHHHHHhcCcceEe----CCCCcccH-HHHHHHHHhCC---CCEEeCCCCCCHHHHHHHHHhCCCCEEEEch
Confidence 4566666666666666655443 66533333 23333433222 34556665443 4455555543 55555532
Q ss_pred CCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEE
Q 015786 195 DTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVN 232 (400)
Q Consensus 195 dg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~ 232 (400)
...+++...++.+..+.+.|+ ++.+.
T Consensus 271 -----------~~~GGit~~~~i~~~A~~~g~-~~~~~ 296 (370)
T 1nu5_A 271 -----------CNMGGIANTLKVAAVAEAAGI-SSYGG 296 (370)
T ss_dssp -----------HHHTSHHHHHHHHHHHHHHTC-EEEEC
T ss_pred -----------hhcCCHHHHHHHHHHHHHcCC-cEEec
Confidence 122557888888888888888 55443
No 228
>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A*
Probab=31.51 E-value=57 Score=28.47 Aligned_cols=51 Identities=14% Similarity=-0.008 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecC
Q 015786 120 NEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNG 172 (400)
Q Consensus 120 e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG 172 (400)
+++.+.+.+..+.|-..+.+++|+|+++--..++++.+.+. |+ .+.+.-.-
T Consensus 83 ~~~~~~i~~~~~~g~~Va~l~~GDP~~~~~~~~l~~~l~~~-gi-~v~viPGi 133 (259)
T 2e0n_A 83 AANYASMAEEVQAGRRVAVVSVGDGGFYSTASAIIERARRD-GL-DCSMTPGI 133 (259)
T ss_dssp GGGHHHHHHHHHTTCEEEEEESBCTTBSCTHHHHHHHHHTT-TC-CEEEECCC
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCCCcccccHHHHHHHHHHC-CC-CEEEeCCh
Confidence 33333333333456567778899999987788888988875 77 67776543
No 229
>3do6_A Formate--tetrahydrofolate ligase; TM1766, putative formyltetrahydrofolate synthetase, structural genomics; HET: MSE; 1.85A {Thermotoga maritima} SCOP: c.37.1.0
Probab=31.38 E-value=1.4e+02 Score=28.84 Aligned_cols=50 Identities=12% Similarity=0.108 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCCCeEEEE
Q 015786 211 HEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINIRFI 261 (400)
Q Consensus 211 ~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~~~~~ 261 (400)
+....+.|+.+++.|+ ++.|-..-.+..+++|++.+.+++.+.|+++...
T Consensus 346 ~~NL~kHIen~~~fGv-pvVVaiN~F~tDT~aEi~~v~~~~~~~G~~~~~s 395 (543)
T 3do6_A 346 FKNLRVHVENLRKFNL-PVVVALNRFSTDTEKEIAYVVKECEKLGVRVAVS 395 (543)
T ss_dssp HHHHHHHHHHHHHTTC-CEEEEEECCTTCCHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCC-CeEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 6777788888888999 8777766666557889999999999999976443
No 230
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=31.32 E-value=2.7e+02 Score=25.56 Aligned_cols=97 Identities=14% Similarity=0.238 Sum_probs=62.6
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchh-hhHHHHHHcC-CCeEEEec
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLA-RKLPKLKESG-LTSVNISL 194 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~-~~~~~l~~~g-~~~i~iSl 194 (400)
++.++..++++.+.+.++..|. ||+-..++ +..+.+++..++ -|.+++.+.+ +.+..+++.+ ++.|++.+
T Consensus 201 ~~~~~a~~~~~~l~~~~i~~iE----qP~~~~~~-~~~~~l~~~~~i---PI~~de~i~~~~~~~~~i~~~~~d~v~ik~ 272 (384)
T 2pgw_A 201 WSVHDAINMCRKLEKYDIEFIE----QPTVSWSI-PAMAHVREKVGI---PIVADQAAFTLYDVYEICRQRAADMICIGP 272 (384)
T ss_dssp CCHHHHHHHHHHHGGGCCSEEE----CCSCTTCH-HHHHHHHHHCSS---CEEESTTCCSHHHHHHHHHTTCCSEEEECH
T ss_pred CCHHHHHHHHHHHHhcCCCEEe----CCCChhhH-HHHHHHHhhCCC---CEEEeCCcCCHHHHHHHHHcCCCCEEEEcc
Confidence 5778888888888888877665 77643333 444555543333 4667776653 5566666654 66666642
Q ss_pred CCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEE
Q 015786 195 DTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNC 233 (400)
Q Consensus 195 dg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~ 233 (400)
...+++...++.++.+.+.|+ ++.+.+
T Consensus 273 -----------~~~GGit~~~~i~~~A~~~g~-~~~~~~ 299 (384)
T 2pgw_A 273 -----------REIGGIQPMMKAAAVAEAAGL-KICIHS 299 (384)
T ss_dssp -----------HHHTSHHHHHHHHHHHHHTTC-CEEECC
T ss_pred -----------hhhCCHHHHHHHHHHHHHCCC-eEeecc
Confidence 122568888888899999998 665553
No 231
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=31.25 E-value=3e+02 Score=25.74 Aligned_cols=96 Identities=14% Similarity=0.124 Sum_probs=61.7
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCc-cchhhHHHHHHHhhhcCCCceEEEEecCcchh-hhHHHHHHcC-CCeEEEe
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEP-TVRKDIEEACFHLSKLKGLKTLAMTTNGLTLA-RKLPKLKESG-LTSVNIS 193 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEP-ll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~-~~~~~l~~~g-~~~i~iS 193 (400)
++.++..++++.+.+.++.-|- || +-..++. ..+.+++..++ -|.+...+.+ ..+..+++.+ ++.|++.
T Consensus 224 ~~~~~A~~~~~~L~~~~i~~iE----qP~~~~~~~~-~~~~l~~~~~i---PIa~dE~~~~~~~~~~~l~~~~~d~v~~k 295 (410)
T 3dip_A 224 WGTHAAARICNALADYGVLWVE----DPIAKMDNIP-AVADLRRQTRA---PICGGENLAGTRRFHEMLCADAIDFVMLD 295 (410)
T ss_dssp BCHHHHHHHHHHGGGGTCSEEE----CCBSCTTCHH-HHHHHHHHHCC---CEEECTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred CCHHHHHHHHHHHHhcCCCEEE----CCCCCcccHH-HHHHHHhhCCC---CEEecCCcCCHHHHHHHHHcCCCCeEeec
Confidence 5788888888888888776665 78 4433443 33444443344 3455555443 4566666654 6667665
Q ss_pred cCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEE
Q 015786 194 LDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVN 232 (400)
Q Consensus 194 ldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~ 232 (400)
+.- .+++...++....+.+.|+ ++.+.
T Consensus 296 ~~~-----------~GGit~~~~ia~~A~~~gi-~~~~h 322 (410)
T 3dip_A 296 LTW-----------CGGLSEGRKIAALAETHAR-PLAPH 322 (410)
T ss_dssp TTT-----------SSCHHHHHHHHHHHHHTTC-CEEEC
T ss_pred ccc-----------cCCHHHHHHHHHHHHHcCC-EEeee
Confidence 432 3678999999999999999 66544
No 232
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=31.17 E-value=2.5e+02 Score=26.10 Aligned_cols=137 Identities=14% Similarity=0.104 Sum_probs=80.2
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhc--CCCceEEEEecCcch-hh---hHHHHHHcCCCeE
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKL--KGLKTLAMTTNGLTL-AR---KLPKLKESGLTSV 190 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~--~g~~~~~i~TNG~ll-~~---~~~~l~~~g~~~i 190 (400)
.+.+++.+.+..+.+.|...|.+..|.+-+.. -.+.++.+++. ..+ .+.+.-|+..- ++ .++.|.+.++.+|
T Consensus 174 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~-d~e~v~avR~avG~d~-~l~vDan~~~~~~~ai~~~~~l~~~~i~~i 251 (398)
T 2pp0_A 174 TPLDQVLKNVVISRENGIGGIKLKVGQPNCAE-DIRRLTAVREALGDEF-PLMVDANQQWDRETAIRMGRKMEQFNLIWI 251 (398)
T ss_dssp SCHHHHHHHHHHHHHTTCSCEEEECCCSCHHH-HHHHHHHHHHHHCSSS-CEEEECTTCSCHHHHHHHHHHHGGGTCSCE
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEecCCCCHHH-HHHHHHHHHHHcCCCC-eEEEECCCCCCHHHHHHHHHHHHHcCCcee
Confidence 47888888888888889888888877543332 24556666553 245 68899997654 32 2345556788877
Q ss_pred EEecCCCCHHHHHHhhcC--------CCHHHHHHHHHHHHHcCCCcEEEEEEEec-CCChhHHHHHHHHHHhCCCeE
Q 015786 191 NISLDTLVPAKFEFLTRR--------KGHEKVMESINAAIEVGYNPVKVNCVVMR-GFNDDEICDFVELTRDRPINI 258 (400)
Q Consensus 191 ~iSldg~~~~~~~~ir~~--------~~~~~v~~~i~~l~~~g~~~v~i~~~v~~-~~n~~el~~l~~~~~~~gv~~ 258 (400)
.-.+...+-+.+..++.. .++. -.+.++.+.+.|.-. .++.-+.+ | ...+..++.++++..|+.+
T Consensus 252 EqP~~~~d~~~~~~l~~~~~iPIa~dE~~~-~~~~~~~~i~~~~~d-~v~ik~~~~G-Gite~~~i~~~A~~~gi~~ 325 (398)
T 2pp0_A 252 EEPLDAYDIEGHAQLAAALDTPIATGEMLT-SFREHEQLILGNASD-FVQPDAPRVG-GISPFLKIMDLAAKHGRKL 325 (398)
T ss_dssp ECCSCTTCHHHHHHHHHHCSSCEEECTTCC-SHHHHHHHHHTTCCS-EECCCHHHHT-SHHHHHHHHHHHHHTTCEE
T ss_pred eCCCChhhHHHHHHHHhhCCCCEEecCCcC-CHHHHHHHHHcCCCC-EEEeCccccC-CHHHHHHHHHHHHHcCCeE
Confidence 755544344555555431 1111 123444555554301 12221221 2 4567788888999988764
No 233
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=31.12 E-value=3.3e+02 Score=25.45 Aligned_cols=66 Identities=21% Similarity=0.302 Sum_probs=42.1
Q ss_pred HHHHHHHhCCCCEEEE--ECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCeEEEecC
Q 015786 124 RLAYLFVTSGVDKIRL--TGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNISLD 195 (400)
Q Consensus 124 ~ii~~~~~~g~~~i~~--~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~iSld 195 (400)
+.++.+.+.|+..|.| +.|.| ..+.++++.+++..++ .+.+ .|-. ..+.+..+.+.|.+.|.++..
T Consensus 147 e~~~~lveaGvdvIvldta~G~~---~~~~e~I~~ik~~~~i-~Vi~-g~V~-t~e~A~~a~~aGAD~I~vG~g 214 (400)
T 3ffs_A 147 ERAKLLVEAGVDVIVLDSAHGHS---LNIIRTLKEIKSKMNI-DVIV-GNVV-TEEATKELIENGADGIKVGIG 214 (400)
T ss_dssp HHHHHHHHHTCSEEEECCSCCSB---HHHHHHHHHHHTTCCC-EEEE-EEEC-SHHHHHHHHHTTCSEEEECC-
T ss_pred HHHHHHHHcCCCEEEEeCCCCCc---ccHHHHHHHHHhcCCC-eEEE-eecC-CHHHHHHHHHcCCCEEEEeCC
Confidence 3455555678888887 33654 3467788888775455 3433 2221 246678899999999999653
No 234
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=31.04 E-value=96 Score=29.60 Aligned_cols=61 Identities=16% Similarity=0.220 Sum_probs=42.5
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEE--C----------------------------------------CCccchhhH
Q 015786 113 KPQLLSLNEILRLAYLFVTSGVDKIRLT--G----------------------------------------GEPTVRKDI 150 (400)
Q Consensus 113 ~~~~~s~e~i~~ii~~~~~~g~~~i~~~--G----------------------------------------GEPll~~~l 150 (400)
.+..++.+.++++|+.|...+...+.++ - |......++
T Consensus 18 aR~f~~~~~ik~~ID~mA~~KlN~lH~HltDdgwriei~~~pl~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~YT~~di 97 (442)
T 2yl5_A 18 GRKYFTLNQLKRIVDKASELGYSDVHLLLGNDGLRFLLDDMTITANGKTYASDDVKKAIIEGTKAYYDDPNGTALTQAEV 97 (442)
T ss_dssp TTSCCCHHHHHHHHHHHHHHTCCEEEEEEESSSBCBCCSCCCEEETTEEECHHHHHHHHHHHHHHHCCCTTCSCBCHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCCcEEEEEEcCCCcceeccCCcceeceeecccccccccccCCccccccCCCCCCcCHHHH
Confidence 3467999999999999887665554443 1 334455678
Q ss_pred HHHHHHhhhcCCCceE--EEEecCcch
Q 015786 151 EEACFHLSKLKGLKTL--AMTTNGLTL 175 (400)
Q Consensus 151 ~~~i~~~~~~~g~~~~--~i~TNG~ll 175 (400)
.+|++++++. || .| .|.+=|...
T Consensus 98 ~eIv~YA~~r-gI-~VIPEID~PGH~~ 122 (442)
T 2yl5_A 98 TELIEYAKSK-DI-GLIPAINSPGHMD 122 (442)
T ss_dssp HHHHHHHHTT-TC-EEEEEEEESSSCH
T ss_pred HHHHHHHHHc-CC-eeeeecccchhHH
Confidence 9999999884 88 34 467777543
No 235
>2v5c_A O-GLCNACASE NAGJ; glycosidase, GH84, GH84C, hydrolase, coiled coil, family 84 glycoside hydrolase, carbohydrate binding module; 2.10A {Clostridium perfringens} PDB: 2cbj_A* 2cbi_A 2vur_A* 2x0y_A* 2j62_A* 2wb5_A* 2xpk_A* 2yds_A* 2ydr_A* 2ydq_A*
Probab=30.68 E-value=1.6e+02 Score=29.29 Aligned_cols=83 Identities=11% Similarity=0.047 Sum_probs=55.8
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC--------CCccch-----hhHHHHHHHhhhcCCCceEE--EEec----Ccc
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG--------GEPTVR-----KDIEEACFHLSKLKGLKTLA--MTTN----GLT 174 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G--------GEPll~-----~~l~~~i~~~~~~~g~~~~~--i~TN----G~l 174 (400)
+..++.+.+++.++.+...+...+.++= +-+..+ .++.++++++++. |+ .|. |.+. +.-
T Consensus 160 R~~~~~~~ik~~id~ma~~KlN~~h~Hl~DDq~~~~~wr~~Yp~~~~~~i~elv~yA~~r-gI-~vv~~i~Pe~d~~~~~ 237 (594)
T 2v5c_A 160 GTPWTHQDRLDQIKFYGENKLNTYIYAPKDDPYHREKWREPYPESEMQRMQELINASAEN-KV-DFVFGISPGIDIRFDG 237 (594)
T ss_dssp SSCCCHHHHHHHHHHHHHTTCCEEEECCTTCGGGTTTTTSCCCGGGHHHHHHHHHHHHHT-TC-EEEEEECGGGTCCCST
T ss_pred CCCCCHHHHHHHHHHHHHhCCcEEEEecccCcccccccCCCCCHHHHHHHHHHHHHHHHC-Cc-EEEEecCCCccccCCC
Confidence 4568999999999999988887877752 211112 2689999999985 88 443 2221 211
Q ss_pred ---------hhhhHHHHHHcCCCeEEEecCCCC
Q 015786 175 ---------LARKLPKLKESGLTSVNISLDTLV 198 (400)
Q Consensus 175 ---------l~~~~~~l~~~g~~~i~iSldg~~ 198 (400)
+..++..+.+.|...+.|..|-..
T Consensus 238 ~~~~~~~~~l~~k~~~l~~~G~~~f~IG~DEi~ 270 (594)
T 2v5c_A 238 DAGEEDFNHLITKAESLYDMGVRSFAIYWDDIQ 270 (594)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCEEEEECSSCS
T ss_pred cchHHHHHHHHHHHHHHHhcCCcEEEecCccCC
Confidence 223455566678888999888764
No 236
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=30.58 E-value=1.2e+02 Score=27.38 Aligned_cols=61 Identities=13% Similarity=0.229 Sum_probs=40.4
Q ss_pred HHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCeEEEe
Q 015786 122 ILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNIS 193 (400)
Q Consensus 122 i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~iS 193 (400)
+...++.+.+.|+..|.+.+|.| . ++++.+++. ++ .+.+... ..+.+..+.+.|.+.|.++
T Consensus 77 ~~~~~~~a~~~g~d~V~~~~g~p---~---~~i~~l~~~-g~-~v~~~v~---~~~~a~~~~~~GaD~i~v~ 137 (332)
T 2z6i_A 77 VEDIVDLVIEEGVKVVTTGAGNP---S---KYMERFHEA-GI-IVIPVVP---SVALAKRMEKIGADAVIAE 137 (332)
T ss_dssp HHHHHHHHHHTTCSEEEECSSCG---G---GTHHHHHHT-TC-EEEEEES---SHHHHHHHHHTTCSCEEEE
T ss_pred HHHHHHHHHHCCCCEEEECCCCh---H---HHHHHHHHc-CC-eEEEEeC---CHHHHHHHHHcCCCEEEEE
Confidence 34456666678999999999988 2 345556553 66 4444321 1245677788899988884
No 237
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=30.40 E-value=2.5e+02 Score=23.72 Aligned_cols=115 Identities=11% Similarity=0.028 Sum_probs=64.5
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcC-CCceEEEEecCcchhhh-HHHHHHcCCCeEEEe
Q 015786 116 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLK-GLKTLAMTTNGLTLARK-LPKLKESGLTSVNIS 193 (400)
Q Consensus 116 ~~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~-g~~~~~i~TNG~ll~~~-~~~l~~~g~~~i~iS 193 (400)
..+.++..++++++... +..+.+ |-|+....=.++++.+++.. +. .+.+..--.-++.. ...+.+.|.+.++|.
T Consensus 14 ~~~~~~a~~~~~~~~~~-~~~ikv--g~~lf~~~G~~~v~~l~~~~p~~-~iflDlKl~Dip~t~~~~~~~~Gad~vtVH 89 (221)
T 3exr_A 14 HSNLKGAITAAVSVGNE-VDVIEA--GTVCLLQVGSELVEVLRSLFPDK-IIVADTKCADAGGTVAKNNAVRGADWMTCI 89 (221)
T ss_dssp CSSHHHHHHHHHHHGGG-CSEEEE--CHHHHHHHCTHHHHHHHHHCTTS-EEEEEEEECSCHHHHHHHHHTTTCSEEEEE
T ss_pred CCCHHHHHHHHHhhCCC-ceEEEE--CHHHHHhcCHHHHHHHHHhCCCC-cEEEEEEeeccHHHHHHHHHHcCCCEEEEe
Confidence 35678888888876432 445555 66666322145677776542 44 44444433323333 355778899999998
Q ss_pred cCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHH
Q 015786 194 LDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDF 247 (400)
Q Consensus 194 ldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l 247 (400)
..+. .+ .+-+.++.+.+.|.++..+.+++.+..+.+++.++
T Consensus 90 ~~~g-~~------------~l~~a~~~~~~~g~~~~~~~Vt~lts~~~~~~~~~ 130 (221)
T 3exr_A 90 CSAT-IP------------TMKAARKAIEDINPDKGEIQVELYGDWTYDQAQQW 130 (221)
T ss_dssp TTSC-HH------------HHHHHHHHHHHHCTTTCEEEEECCSSCCHHHHHHH
T ss_pred ccCC-HH------------HHHHHHHHHHhcCCCcceEEEEEcCCCCHHHHHHH
Confidence 8773 22 23334444455563234566667664455555544
No 238
>3ol0_A De novo designed monomer trefoil-fold SUB-domain forms HOMO-trimer assembly; beta-trefoil, synthetic protein, function-COMP only; 1.48A {Synthetic construct}
Probab=30.35 E-value=28 Score=22.02 Aligned_cols=31 Identities=13% Similarity=-0.080 Sum_probs=21.8
Q ss_pred cCCCCCeEEEccCCeEEeccCCCCCCCchHH
Q 015786 326 FCAGCNRLRLLADGNFKVCLFGPSEVSLRDP 356 (400)
Q Consensus 326 ~C~~~~~l~I~~dG~v~pC~~~~~~~~lg~i 356 (400)
.|.....+.|.|||.|-.+--.+..+++-++
T Consensus 12 ~~~~Gf~LqI~PdG~V~GTr~~~s~~SlLEi 42 (48)
T 3ol0_A 12 STETGQYLRINPDGTVDGTRDRSDPHIQFQI 42 (48)
T ss_dssp ETTTCCEEEECTTSBEEEESCTTCGGGCEEE
T ss_pred eccCcEEeEECCCCCCccccCCCCCcceEEE
Confidence 3555567999999999998655555555443
No 239
>3nut_A Precorrin-3 methylase; vitamin B12 pathway, cobalamin, methyltransferase, transfera; HET: SAH; 2.22A {Rhodobacter capsulatus}
Probab=30.34 E-value=2.6e+02 Score=23.97 Aligned_cols=110 Identities=15% Similarity=0.166 Sum_probs=60.3
Q ss_pred HHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhh---cCCCceEEEEecCcchhhhHHHHHHcC--C--CeEEEecCC
Q 015786 124 RLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSK---LKGLKTLAMTTNGLTLARKLPKLKESG--L--TSVNISLDT 196 (400)
Q Consensus 124 ~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~---~~g~~~~~i~TNG~ll~~~~~~l~~~g--~--~~i~iSldg 196 (400)
.+++.+ ..|-..+.+.+|+|+++--..++++.+.+ ..++ .+.+.-.-+.. .......| + +...+|+.+
T Consensus 70 ~li~~~-~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~~~~~gi-~veviPGiSS~---~aa~a~~G~plt~~~~~~s~~~ 144 (251)
T 3nut_A 70 HALEMA-AEGRRVVVVSSGDPGVFAMASALFEALEAHPEHAGT-EIRILPGITAM---LAAAAAAGAPLGHDFCAINLSD 144 (251)
T ss_dssp HHHHHH-HTTCEEEEEESBCTTSSSHHHHHHHHHHHCGGGTTC-CEEEECCCCHH---HHHHHHHEETTSSSEEEEESCC
T ss_pred HHHHHH-HCCCeEEEEeCCCcccccCHHHHHHHHHhhcccCCC-cEEEECCHHHH---HHHHHHhCCCccCCeEEEEecC
Confidence 445443 45656788889999998777778888875 1377 67765433322 22222222 2 345566643
Q ss_pred CCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCC---ChhHHHHHHHHHHh
Q 015786 197 LVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGF---NDDEICDFVELTRD 253 (400)
Q Consensus 197 ~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~---n~~el~~l~~~~~~ 253 (400)
. ...++.+.+.++.+...+. . +++..+. ....+.++.+.+.+
T Consensus 145 ~----------~~~~~~~~~~l~~l~~~~~-t----lvl~~~~~~~~p~~i~~~~~ll~~ 189 (251)
T 3nut_A 145 N----------LKPFEILEKRLRHAARGDF-A----MAFYNPRSKSRPHQFTRVLEILRE 189 (251)
T ss_dssp T----------TSCHHHHHHHHHHHHHTTC-E----EEEESCSCSSSTTHHHHHHHHHHH
T ss_pred C----------CCChHHHHHHHHHHhCCCC-E----EEEECCccccchhHHHHHHHHHHh
Confidence 1 1235666666776766654 2 2222211 22466665555554
No 240
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=30.32 E-value=2.1e+02 Score=24.67 Aligned_cols=75 Identities=8% Similarity=-0.007 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhCCCCEEEEECCCccc--------------hhhHHHHHHHhhhcCCCceEEEEec-------Ccchhh
Q 015786 119 LNEILRLAYLFVTSGVDKIRLTGGEPTV--------------RKDIEEACFHLSKLKGLKTLAMTTN-------GLTLAR 177 (400)
Q Consensus 119 ~e~i~~ii~~~~~~g~~~i~~~GGEPll--------------~~~l~~~i~~~~~~~g~~~~~i~TN-------G~ll~~ 177 (400)
.+.+.+.++.+..+|...|.+..|-+.. ...+.++.+.+++. |+ .+.+.+. .....+
T Consensus 103 ~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~-Gv-~l~lE~~~~~~~~~~~~~~~ 180 (287)
T 3kws_A 103 MDTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQH-GT-SVIFEPLNRKECFYLRQVAD 180 (287)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHT-TC-CEEECCCCTTTCSSCCCHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHc-CC-EEEEEecCcccCcccCCHHH
Q ss_pred hHHHHHHcCCCeEEEecC
Q 015786 178 KLPKLKESGLTSVNISLD 195 (400)
Q Consensus 178 ~~~~l~~~g~~~i~iSld 195 (400)
....+.+.+-..+.+.+|
T Consensus 181 ~~~ll~~v~~~~vg~~~D 198 (287)
T 3kws_A 181 AASLCRDINNPGVRCMGD 198 (287)
T ss_dssp HHHHHHHHCCTTEEEEEE
T ss_pred HHHHHHHcCCCCeeEEee
No 241
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=30.25 E-value=1.8e+02 Score=26.34 Aligned_cols=60 Identities=13% Similarity=0.142 Sum_probs=39.3
Q ss_pred HHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCeEEEe
Q 015786 123 LRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNIS 193 (400)
Q Consensus 123 ~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~iS 193 (400)
...++.+.+.|+..|.+.+|+| + ++++.+++. ++ .+..... ..+.+..+.+.|.+.|.++
T Consensus 92 ~~~~~~~~~~g~d~V~l~~g~p---~---~~~~~l~~~-g~-~v~~~v~---s~~~a~~a~~~GaD~i~v~ 151 (326)
T 3bo9_A 92 DDLVKVCIEEKVPVVTFGAGNP---T---KYIRELKEN-GT-KVIPVVA---SDSLARMVERAGADAVIAE 151 (326)
T ss_dssp HHHHHHHHHTTCSEEEEESSCC---H---HHHHHHHHT-TC-EEEEEES---SHHHHHHHHHTTCSCEEEE
T ss_pred HHHHHHHHHCCCCEEEECCCCc---H---HHHHHHHHc-CC-cEEEEcC---CHHHHHHHHHcCCCEEEEE
Confidence 4455555678999999999988 2 455666664 66 3443221 1355677788899988774
No 242
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=30.14 E-value=79 Score=28.81 Aligned_cols=55 Identities=16% Similarity=0.167 Sum_probs=39.7
Q ss_pred CCCHHHHHHHHHHHHhCCC-CEEEE-ECC--------CccchhhHHHHHHHhhhcCCCceEEEEecC
Q 015786 116 LLSLNEILRLAYLFVTSGV-DKIRL-TGG--------EPTVRKDIEEACFHLSKLKGLKTLAMTTNG 172 (400)
Q Consensus 116 ~~s~e~i~~ii~~~~~~g~-~~i~~-~GG--------EPll~~~l~~~i~~~~~~~g~~~~~i~TNG 172 (400)
-|+.+++..+++++.+.+. ..+.. ++. -|.+.++..++++++++. |+ .+.|.|-+
T Consensus 104 GmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-G~-~v~ivSas 168 (327)
T 4as2_A 104 GFTLRELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQRELYNKLMEN-GI-EVYVISAA 168 (327)
T ss_dssp TSBHHHHHHHHHHHHHHCSCEEEEEEETTEEEEEEECCCEECHHHHHHHHHHHHT-TC-EEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhccccccccccccccccccccccccCHHHHHHHHHHHHC-CC-EEEEEeCC
Confidence 4899999999988766432 22222 222 257889999999999985 98 67777755
No 243
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=30.09 E-value=1.4e+02 Score=27.73 Aligned_cols=76 Identities=14% Similarity=0.155 Sum_probs=39.9
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECC---Cc-----------------cchhhHHHHHHHhhhcCCCceEEEEecCcch-
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGG---EP-----------------TVRKDIEEACFHLSKLKGLKTLAMTTNGLTL- 175 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GG---EP-----------------ll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll- 175 (400)
++.+++..+++.+.+.|+..|.+++. -+ -+.+--.+.+..+++.-+- .+-|..||-..
T Consensus 231 ~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~-~ipvI~~GGI~s 309 (367)
T 3zwt_A 231 LTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQG-RVPIIGVGGVSS 309 (367)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTT-CSCEEEESSCCS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCC-CceEEEECCCCC
Confidence 45566677777777777777776641 11 0112123555555554311 12334444333
Q ss_pred hhhHHHHHHcCCCeEEEe
Q 015786 176 ARKLPKLKESGLTSVNIS 193 (400)
Q Consensus 176 ~~~~~~l~~~g~~~i~iS 193 (400)
.+.+.+++..|.+.|++.
T Consensus 310 ~~da~~~l~~GAd~V~vg 327 (367)
T 3zwt_A 310 GQDALEKIRAGASLVQLY 327 (367)
T ss_dssp HHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHHcCCCEEEEC
Confidence 355655556777777765
No 244
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens}
Probab=29.96 E-value=96 Score=30.54 Aligned_cols=60 Identities=15% Similarity=0.309 Sum_probs=42.9
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEE--------------------C---------------------CCccchhhHH
Q 015786 113 KPQLLSLNEILRLAYLFVTSGVDKIRLT--------------------G---------------------GEPTVRKDIE 151 (400)
Q Consensus 113 ~~~~~s~e~i~~ii~~~~~~g~~~i~~~--------------------G---------------------GEPll~~~l~ 151 (400)
.+..++.+.++++|+.|...+...+.++ | |......++.
T Consensus 148 sRhf~~~~~ik~~ID~MA~~KlN~lH~HltDdqgwriei~~yP~Lt~~Ga~r~~t~~g~~~~~~~~~~~~~g~YT~~di~ 227 (543)
T 3rcn_A 148 ARHFMPKDNVLRFIEVMAMHKLNVLHLHLTDDQGWRMQINRYPKLTETGAWRRESSLGSWRAGVFDGRPHGGFYTQDDLR 227 (543)
T ss_dssp TTSCCCHHHHHHHHHHHHHTTCCEEEEECEETTEECBCCSSCTHHHHTTTEESCCBSSCGGGCCBCCCCEECCBCHHHHH
T ss_pred CCCccCHHHHHHHHHHHHHcCCcEEEeecccccCcchhcccchhhhhhccccccccccccccccccCCccCCCcCHHHHH
Confidence 3567899999999999998887777765 2 2234456799
Q ss_pred HHHHHhhhcCCCceEE--EEecCcc
Q 015786 152 EACFHLSKLKGLKTLA--MTTNGLT 174 (400)
Q Consensus 152 ~~i~~~~~~~g~~~~~--i~TNG~l 174 (400)
++++++++. || .|. |.+=|..
T Consensus 228 eIv~YA~~r-gI-~VIPEID~PGH~ 250 (543)
T 3rcn_A 228 EIVAFAADR-HI-TVIPEIDVPGHS 250 (543)
T ss_dssp HHHHHHHHT-TC-EEEEECCCSSSC
T ss_pred HHHHHHHHc-CC-EEeeeeccchhH
Confidence 999999984 87 443 4444543
No 245
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=29.72 E-value=2.7e+02 Score=23.90 Aligned_cols=124 Identities=10% Similarity=0.038 Sum_probs=60.2
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCC-ccc----hhhHHHHHHHhhhcCCCceEEEEecCc-ch-----------hhhH
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGE-PTV----RKDIEEACFHLSKLKGLKTLAMTTNGL-TL-----------ARKL 179 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGE-Pll----~~~l~~~i~~~~~~~g~~~~~i~TNG~-ll-----------~~~~ 179 (400)
+++++ .++.+++.|...|.+.+.. +-+ ..++.++.+.+++. |+....+.+... .. .+.+
T Consensus 15 ~~~~~---~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~-gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i 90 (286)
T 3dx5_A 15 ISFTD---IVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDK-TLEITMISDYLDISLSADFEKTIEKCEQLA 90 (286)
T ss_dssp CCHHH---HHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGG-TCCEEEEECCCCCSTTSCHHHHHHHHHHHH
T ss_pred CCHHH---HHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHc-CCeEEEEecCCCCCCchhHHHHHHHHHHHH
Confidence 56655 4566668999999997632 111 12355666666664 884333322210 11 1123
Q ss_pred HHHHHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHH----HHcCCCcEEEEEEEecCC---ChhHHHHHHHHH
Q 015786 180 PKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAA----IEVGYNPVKVNCVVMRGF---NDDEICDFVELT 251 (400)
Q Consensus 180 ~~l~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l----~~~g~~~v~i~~~v~~~~---n~~el~~l~~~~ 251 (400)
+.....|...|.+..-...... .....++.+.+.++.+ .+.|+ .+.+.. .++. +.+++.++++.+
T Consensus 91 ~~A~~lG~~~v~~~~g~~~~~~----~~~~~~~~~~~~l~~l~~~a~~~Gv-~l~lE~--~~~~~~~~~~~~~~l~~~~ 162 (286)
T 3dx5_A 91 ILANWFKTNKIRTFAGQKGSAD----FSQQERQEYVNRIRMICELFAQHNM-YVLLET--HPNTLTDTLPSTLELLGEV 162 (286)
T ss_dssp HHHHHHTCCEEEECSCSSCGGG----SCHHHHHHHHHHHHHHHHHHHHTTC-EEEEEC--CTTSTTSSHHHHHHHHHHH
T ss_pred HHHHHhCCCEEEEcCCCCCccc----CcHHHHHHHHHHHHHHHHHHHHhCC-EEEEec--CCCcCcCCHHHHHHHHHhc
Confidence 3344568878877432211110 0001145555555544 45577 555553 2221 334455555544
No 246
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=29.67 E-value=3.4e+02 Score=25.15 Aligned_cols=69 Identities=17% Similarity=0.158 Sum_probs=44.2
Q ss_pred HHHHHHHHhCCCCEEEEE--CCCccchhhHHHHHHHhhhcC-CCceEEEEecCcchhhhHHHHHHcCCCeEEEecCCC
Q 015786 123 LRLAYLFVTSGVDKIRLT--GGEPTVRKDIEEACFHLSKLK-GLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDTL 197 (400)
Q Consensus 123 ~~ii~~~~~~g~~~i~~~--GGEPll~~~l~~~i~~~~~~~-g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~iSldg~ 197 (400)
.+.++.+.+.|+..|.+. -|.| ..+.++++.+++.. ++ .+.+ .+... .+.+..+.+.|.+.|.++..+.
T Consensus 155 ~~~a~~~~~~G~d~i~i~~~~g~~---~~~~e~i~~ir~~~~~~-pviv-~~v~~-~~~a~~a~~~Gad~I~vg~~~G 226 (404)
T 1eep_A 155 IERVEELVKAHVDILVIDSAHGHS---TRIIELIKKIKTKYPNL-DLIA-GNIVT-KEAALDLISVGADCLKVGIGPG 226 (404)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSS---HHHHHHHHHHHHHCTTC-EEEE-EEECS-HHHHHHHHTTTCSEEEECSSCS
T ss_pred HHHHHHHHHCCCCEEEEeCCCCCh---HHHHHHHHHHHHHCCCC-eEEE-cCCCc-HHHHHHHHhcCCCEEEECCCCC
Confidence 334455567888888872 3655 34567788777654 55 4444 22222 3667888899999999976553
No 247
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=29.59 E-value=2.1e+02 Score=26.07 Aligned_cols=51 Identities=22% Similarity=0.279 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEEEecCC--------------ChhHHHHHHHHHHhCCCeEEEEe
Q 015786 212 EKVMESINAAIEVGYNPVKVNCVVMRGF--------------NDDEICDFVELTRDRPINIRFIE 262 (400)
Q Consensus 212 ~~v~~~i~~l~~~g~~~v~i~~~v~~~~--------------n~~el~~l~~~~~~~gv~~~~~~ 262 (400)
+.+...++.|++.|.+.|.+...+.+.- +.+.+..+++.+++.|+.+.+-.
T Consensus 53 ~~~~~~l~~lk~~g~N~VrL~v~~~~~~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V~l~p 117 (343)
T 3civ_A 53 DEARASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCLKP 117 (343)
T ss_dssp HHHHHHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhHHHHHHHHHHcCCCEEEEEeeecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4556888999999986666665543321 56789999999999999876533
No 248
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=29.55 E-value=2.5e+02 Score=25.68 Aligned_cols=61 Identities=15% Similarity=0.157 Sum_probs=41.3
Q ss_pred HHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCeEEE
Q 015786 122 ILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNI 192 (400)
Q Consensus 122 i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~i 192 (400)
+...++.+.+.|+..|.+++|.|. .++++.+++. ++ .+....+. .+.+..+.+.|.+.|.+
T Consensus 111 ~~~~~~~~~~~g~~~V~~~~g~~~-----~~~i~~~~~~-g~-~v~~~v~t---~~~a~~a~~~GaD~i~v 171 (369)
T 3bw2_A 111 YDAKLAVLLDDPVPVVSFHFGVPD-----REVIARLRRA-GT-LTLVTATT---PEEARAVEAAGADAVIA 171 (369)
T ss_dssp HHHHHHHHHHSCCSEEEEESSCCC-----HHHHHHHHHT-TC-EEEEEESS---HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCc-----HHHHHHHHHC-CC-eEEEECCC---HHHHHHHHHcCCCEEEE
Confidence 344556666789999999999983 3456666663 66 45443321 24467777889999888
No 249
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=29.37 E-value=3.2e+02 Score=25.27 Aligned_cols=135 Identities=14% Similarity=0.180 Sum_probs=79.2
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhc--CCCceEEEEecCcch-hh---hHHHHHHcCCCeEE
Q 015786 118 SLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKL--KGLKTLAMTTNGLTL-AR---KLPKLKESGLTSVN 191 (400)
Q Consensus 118 s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~--~g~~~~~i~TNG~ll-~~---~~~~l~~~g~~~i~ 191 (400)
+.+++.+.+..+.+.|...|.+..|..+ ....+.++.+++. .++ .+.+.-|+..- ++ .++.|.+.++.+|.
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~--~~~~e~v~avR~a~g~d~-~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE 221 (397)
T 2qde_A 145 EPEAVAEEALAVLREGFHFVKLKAGGPL--KADIAMVAEVRRAVGDDV-DLFIDINGAWTYDQALTTIRALEKYNLSKIE 221 (397)
T ss_dssp CHHHHHHHHHHHHHHTCSCEEEECCSCH--HHHHHHHHHHHHHHCTTS-CEEEECTTCCCHHHHHHHHHHHGGGCCSCEE
T ss_pred CHHHHHHHHHHHHHhhhhheeecccCCH--HHHHHHHHHHHHhhCCCC-EEEEECCCCCCHHHHHHHHHHHHhCCCCEEE
Confidence 5777777777777778888888876422 1234666666654 245 68899997654 33 23455567888777
Q ss_pred EecCCCCHHHHHHhhcCC--------CHHHHHHHHHHHHHcCCCcEEEEEEEec-CCChhHHHHHHHHHHhCCCeE
Q 015786 192 ISLDTLVPAKFEFLTRRK--------GHEKVMESINAAIEVGYNPVKVNCVVMR-GFNDDEICDFVELTRDRPINI 258 (400)
Q Consensus 192 iSldg~~~~~~~~ir~~~--------~~~~v~~~i~~l~~~g~~~v~i~~~v~~-~~n~~el~~l~~~~~~~gv~~ 258 (400)
=.+...+-+.+..++..- ++.. ...++.+.+.|.-. .++.-+.+ | -..+..+++++++..|+.+
T Consensus 222 qP~~~~~~~~~~~l~~~~~iPIa~dE~~~~-~~~~~~~i~~~~~d-~v~ik~~~~G-Git~~~~i~~~A~~~g~~~ 294 (397)
T 2qde_A 222 QPLPAWDLDGMARLRGKVATPIYADESAQE-LHDLLAIINKGAAD-GLMIKTQKAG-GLLKAQRWLTLARLANLPV 294 (397)
T ss_dssp CCSCTTCHHHHHHHHTTCSSCEEESTTCCS-HHHHHHHHHHTCCS-EEEECHHHHT-SHHHHHHHHHHHHHHTCCE
T ss_pred CCCChhhHHHHHHHHhhCCCCEEEeCCcCC-HHHHHHHHHcCCCC-EEEEeccccC-CHHHHHHHHHHHHHcCCeE
Confidence 555444455566665421 1111 23445555544302 12322222 2 4567888888999888865
No 250
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=29.31 E-value=2.2e+02 Score=24.49 Aligned_cols=78 Identities=19% Similarity=0.200 Sum_probs=49.8
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEECCCcc---ch--------hhHHHHHHHhhhcCCCceEEEEecCc-ch--hhhHHHHH
Q 015786 118 SLNEILRLAYLFVTSGVDKIRLTGGEPT---VR--------KDIEEACFHLSKLKGLKTLAMTTNGL-TL--ARKLPKLK 183 (400)
Q Consensus 118 s~e~i~~ii~~~~~~g~~~i~~~GGEPl---l~--------~~l~~~i~~~~~~~g~~~~~i~TNG~-ll--~~~~~~l~ 183 (400)
..+.+.+.++.+..+|...|.+..|-+- .. ..+.++.+.+++ .|+ .+.+.+... ++ .+.+..++
T Consensus 82 ~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~-~Gv-~l~lE~~~~~~~~~~~~~~~l~ 159 (286)
T 3dx5_A 82 TIEKCEQLAILANWFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQ-HNM-YVLLETHPNTLTDTLPSTLELL 159 (286)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHH-TTC-EEEEECCTTSTTSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHH-hCC-EEEEecCCCcCcCCHHHHHHHH
Confidence 3567788888888999999988655421 11 114455566665 488 788887533 32 24455554
Q ss_pred H-cCCCeEEEecCCC
Q 015786 184 E-SGLTSVNISLDTL 197 (400)
Q Consensus 184 ~-~g~~~i~iSldg~ 197 (400)
+ .+-..+.+.+|..
T Consensus 160 ~~~~~~~vg~~~D~~ 174 (286)
T 3dx5_A 160 GEVDHPNLKINLDFL 174 (286)
T ss_dssp HHHCCTTEEEEEEHH
T ss_pred HhcCCCCeEEEeccc
Confidence 4 4556799998873
No 251
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=29.30 E-value=3.3e+02 Score=24.89 Aligned_cols=96 Identities=16% Similarity=0.178 Sum_probs=49.5
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchh--hhHHHHHHcC-CCeEEEe
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLA--RKLPKLKESG-LTSVNIS 193 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~--~~~~~l~~~g-~~~i~iS 193 (400)
++.++..++++.+.+.++..|- ||+-..++. ..+.+++..++ -|.+.+.+.+ +.+..+++.+ ++.|++.
T Consensus 211 ~~~~~a~~~~~~l~~~~i~~iE----~P~~~~~~~-~~~~l~~~~~i---PIa~dE~~~~~~~~~~~~i~~~~~d~v~ik 282 (382)
T 1rvk_A 211 YSRTDALALGRGLEKLGFDWIE----EPMDEQSLS-SYKWLSDNLDI---PVVGPESAAGKHWHRAEWIKAGACDILRTG 282 (382)
T ss_dssp CCHHHHHHHHHHHHTTTCSEEE----CCSCTTCHH-HHHHHHHHCSS---CEEECSSCSSHHHHHHHHHHTTCCSEEEEC
T ss_pred CCHHHHHHHHHHHHhcCCCEEe----CCCChhhHH-HHHHHHhhCCC---CEEEeCCccCcHHHHHHHHHcCCCCEEeeC
Confidence 3556666666666555554443 555322222 22333332223 3444454433 3345554443 4555543
Q ss_pred cCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEE
Q 015786 194 LDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVN 232 (400)
Q Consensus 194 ldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~ 232 (400)
+ ...+++...++.+..+.+.|+ .+.+.
T Consensus 283 ~-----------~~~GGit~~~~i~~~A~~~g~-~~~~~ 309 (382)
T 1rvk_A 283 V-----------NDVGGITPALKTMHLAEAFGM-ECEVH 309 (382)
T ss_dssp H-----------HHHTSHHHHHHHHHHHHHTTC-CEEEC
T ss_pred c-----------hhcCCHHHHHHHHHHHHHcCC-eEeec
Confidence 2 122567888888888888888 66555
No 252
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=29.08 E-value=93 Score=29.77 Aligned_cols=103 Identities=11% Similarity=0.144 Sum_probs=61.7
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEECCCc-------c-----------chhhHHHHHHHhhhcCCCceEEEEecCcc-hh
Q 015786 116 LLSLNEILRLAYLFVTSGVDKIRLTGGEP-------T-----------VRKDIEEACFHLSKLKGLKTLAMTTNGLT-LA 176 (400)
Q Consensus 116 ~~s~e~i~~ii~~~~~~g~~~i~~~GGEP-------l-----------l~~~l~~~i~~~~~~~g~~~~~i~TNG~l-l~ 176 (400)
.++.+++..+++.+.+.|+..|.++++-. + +.+--.+++..+++.-+- .+-|..+|-. -.
T Consensus 307 d~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~-~iPVIg~GGI~s~ 385 (443)
T 1tv5_A 307 DLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNK-QIPIIASGGIFSG 385 (443)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTT-CSCEEEESSCCSH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCC-CCcEEEECCCCCH
Confidence 36677899999999999999999987421 0 012224667777665311 2234444444 45
Q ss_pred hhHHHHHHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHH-HHHcCC
Q 015786 177 RKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINA-AIEVGY 226 (400)
Q Consensus 177 ~~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~-l~~~g~ 226 (400)
+.+.+.+..|.+.|++. ..-.+ .+..-+.++.+.+.. +.+.|+
T Consensus 386 ~DA~e~l~aGAd~Vqig----rall~---~gP~l~~~i~~~l~~~l~~~G~ 429 (443)
T 1tv5_A 386 LDALEKIEAGASVCQLY----SCLVF---NGMKSAVQIKRELNHLLYQRGY 429 (443)
T ss_dssp HHHHHHHHTTEEEEEES----HHHHH---HGGGHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEEc----HHHHh---cChHHHHHHHHHHHHHHHHhCC
Confidence 77777778898888876 12122 121226667766665 344465
No 253
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=29.01 E-value=50 Score=22.51 Aligned_cols=38 Identities=21% Similarity=0.411 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHH-HcCCCcEEEEEEEecCCChhHHHHHHHHH
Q 015786 211 HEKVMESINAAI-EVGYNPVKVNCVVMRGFNDDEICDFVELT 251 (400)
Q Consensus 211 ~~~v~~~i~~l~-~~g~~~v~i~~~v~~~~n~~el~~l~~~~ 251 (400)
.++.++-++.+. .+|-+ .++.++.. .|+++..+++++.
T Consensus 31 leralqelekalaragar--nvqitisa-endeqakelleli 69 (96)
T 2jvf_A 31 LERALQELEKALARAGAR--NVQITISA-ENDEQAKELLELI 69 (96)
T ss_dssp HHHHHHHHHHHHHHHTCS--EEEEEEEC-SSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccc--ceEEEEEe-cChHHHHHHHHHH
Confidence 788888777655 45653 45666766 6888766655543
No 254
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=29.00 E-value=2.9e+02 Score=24.11 Aligned_cols=114 Identities=15% Similarity=0.177 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHhCCCCEEEEE----------CCCccchhh-HHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCC
Q 015786 120 NEILRLAYLFVTSGVDKIRLT----------GGEPTVRKD-IEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLT 188 (400)
Q Consensus 120 e~i~~ii~~~~~~g~~~i~~~----------GGEPll~~~-l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~ 188 (400)
+++..++.+ .....|+|. ||==+ +.+ +.++++.+++. |+ .+++.-.. -.+.++.-.+.|.+
T Consensus 76 ~emi~ial~---~kP~~vtLVPEkreE~TTegGldv-~~~~L~~~i~~L~~~-GI-rVSLFIDp--d~~qi~aA~~~GAd 147 (260)
T 3o6c_A 76 DEILNLALK---LKPHRVTLVPEKREELTTEGGLCL-NHAKLKQSIEKLQNA-NI-EVSLFINP--SLEDIEKSKILKAQ 147 (260)
T ss_dssp HHHHHHHHH---HCCSEEEECCCSGGGBCTTSSBCT-TCTTHHHHHHHHHHT-TC-EEEEEECS--CHHHHHHHHHTTCS
T ss_pred HHHHHHHHH---cCCCEEEECCCCCCccCCCCChhh-CHHHHHHHHHHHHHC-CC-EEEEEeCC--CHHHHHHHHHhCCC
Confidence 344444443 345567774 45433 433 78899999885 88 68876654 23567777788888
Q ss_pred eEEEecCCCCHHHHHH-----------------------hhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHH
Q 015786 189 SVNISLDTLVPAKFEF-----------------------LTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEIC 245 (400)
Q Consensus 189 ~i~iSldg~~~~~~~~-----------------------ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~ 245 (400)
.|-+.--.+ .+.+.. -.....++++.++.+.+.+.|+ .+....|.|++.+.
T Consensus 148 ~IELhTG~Y-A~a~~~~~sn~~~~~~~~~~l~~~~~~~~~~~~~el~~l~~aA~~A~~lGL-----~VnAGHGL~y~Nv~ 221 (260)
T 3o6c_A 148 FIELHTGHY-ANLHNALFSNISHTAFALKELDQDKKTLQAQFEKELQNLELCAKKGLELGL-----KVAAGHGLNYKNVK 221 (260)
T ss_dssp EEEECCHHH-HHHHHHHHSSGGGSTTCCGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHTTC-----EEEECTTCCTTTTH
T ss_pred EEEEechHh-hhhhhccccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHcCC-----EEecCCCCCHHHHH
Confidence 877742221 111210 0011126677777777777777 33345567888877
Q ss_pred HH
Q 015786 246 DF 247 (400)
Q Consensus 246 ~l 247 (400)
.+
T Consensus 222 ~i 223 (260)
T 3o6c_A 222 PV 223 (260)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 255
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=28.99 E-value=1.7e+02 Score=24.09 Aligned_cols=60 Identities=13% Similarity=0.036 Sum_probs=38.3
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHH-HHHHcCCC
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLP-KLKESGLT 188 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~-~l~~~g~~ 188 (400)
++.+++.++...+....+ +|.+.|+..++++.+++. |+ .+.|.||+.. ..+. .+...|++
T Consensus 72 ~~~~~~~~~~~~~~~~~~--------~~~~~~g~~~~l~~l~~~-g~-~~~ivS~~~~--~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 72 HSPVELAAWHEEFMRDVI--------RPSLTVQAVDVVRGHLAA-GD-LCALVTATNS--FVTAPIARAFGVQ 132 (232)
T ss_dssp SCHHHHHHHHHHHHHHTT--------GGGCCHHHHHHHHHHHHT-TC-EEEEEESSCH--HHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHHhh--------hhhcCHHHHHHHHHHHHC-CC-EEEEEeCCCH--HHHHHHHHHcCCC
Confidence 455666666655433221 245688999999999985 88 7999999853 3333 23345665
No 256
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=28.99 E-value=4e+02 Score=25.73 Aligned_cols=124 Identities=15% Similarity=0.162 Sum_probs=70.1
Q ss_pred HHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcC-CCceEEEEecCcchhhhHHHHHHcCCCeEEEecCCCCHHH
Q 015786 123 LRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLK-GLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDTLVPAK 201 (400)
Q Consensus 123 ~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~-g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~iSldg~~~~~ 201 (400)
.+.++.+.+.|+..|.+....|-. ..+.++++.+++.. ++ .+.+ -| ....+....+.+.|.+.|.+++.+..-..
T Consensus 258 ~era~aLveaGvd~I~Id~a~g~~-~~v~~~i~~i~~~~~~~-~vi~-g~-v~t~e~a~~~~~aGad~i~vg~g~gsi~~ 333 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHGHS-QGVIDKVKEVRAKYPSL-NIIA-GN-VATAEATKALIEAGANVVKVGIGPGSICT 333 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTS-HHHHHHHHHHHHHCTTS-EEEE-EE-ECSHHHHHHHHHHTCSEEEECSSCSTTCC
T ss_pred HHHHHHHHhhccceEEecccccch-hhhhhHHHHHHHhCCCc-eEEe-ee-eccHHHHHHHHHhCCCEEEECCCCccccc
Confidence 344556667899999987755422 34667888887653 23 3332 12 11236678899999999998765543222
Q ss_pred HHHhhcCCC--HHHHHHHHHHHHHcCCCcEEEEEEEecCC-ChhHHHHHHHHHHhCCCeEE
Q 015786 202 FEFLTRRKG--HEKVMESINAAIEVGYNPVKVNCVVMRGF-NDDEICDFVELTRDRPINIR 259 (400)
Q Consensus 202 ~~~ir~~~~--~~~v~~~i~~l~~~g~~~v~i~~~v~~~~-n~~el~~l~~~~~~~gv~~~ 259 (400)
-....+.+. +..+.+..+.+.+.++ ++... -|. +..++.+.+. .|.+..
T Consensus 334 ~~~~~g~g~p~~~~l~~v~~~~~~~~i-PVIa~----GGI~~~~di~kala----~GA~~V 385 (511)
T 3usb_A 334 TRVVAGVGVPQLTAVYDCATEARKHGI-PVIAD----GGIKYSGDMVKALA----AGAHVV 385 (511)
T ss_dssp HHHHHCCCCCHHHHHHHHHHHHHTTTC-CEEEE----SCCCSHHHHHHHHH----TTCSEE
T ss_pred cccccCCCCCcHHHHHHHHHHHHhCCC-cEEEe----CCCCCHHHHHHHHH----hCchhh
Confidence 222333322 6655555555666677 54332 232 4455555443 466543
No 257
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=28.96 E-value=2.3e+02 Score=23.57 Aligned_cols=68 Identities=24% Similarity=0.219 Sum_probs=46.1
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCeEEEe
Q 015786 118 SLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNIS 193 (400)
Q Consensus 118 s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~iS 193 (400)
+.+++..+++.+.+.|+.-|.+.- -.++-.+.++.+++ ..+ .+...| .+..+.++..++.|.+.+...
T Consensus 23 ~~~~~~~~~~~l~~gGv~~iel~~----k~~~~~~~i~~~~~-~~~-~~gag~--vl~~d~~~~A~~~GAd~v~~~ 90 (207)
T 2yw3_A 23 GGEDLLGLARVLEEEGVGALEITL----RTEKGLEALKALRK-SGL-LLGAGT--VRSPKEAEAALEAGAAFLVSP 90 (207)
T ss_dssp SCCCHHHHHHHHHHTTCCEEEEEC----SSTHHHHHHHHHTT-SSC-EEEEES--CCSHHHHHHHHHHTCSEEEES
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeC----CChHHHHHHHHHhC-CCC-EEEeCe--EeeHHHHHHHHHcCCCEEEcC
Confidence 445667778888888998888862 22344577777777 555 344433 444688888889999877544
No 258
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=28.95 E-value=1.6e+02 Score=29.68 Aligned_cols=74 Identities=16% Similarity=0.142 Sum_probs=51.5
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECC--Cccch--------hhHHHHHHHhhhcCCCceEEEEecCcch-hhhHHHHHHc
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGG--EPTVR--------KDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKES 185 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GG--EPll~--------~~l~~~i~~~~~~~g~~~~~i~TNG~ll-~~~~~~l~~~ 185 (400)
++.++...+++.+.+.|+..|.+++| ||... ....++++.+++..++ -+..||-+. .+.+..+++.
T Consensus 225 ~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i---Pvi~~Ggi~~~~~a~~~l~~ 301 (671)
T 1ps9_A 225 GTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSL---PLVTTNRINDPQVADDILSR 301 (671)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSS---CEEECSSCCSHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCc---eEEEeCCCCCHHHHHHHHHc
Confidence 57788888999898899999998865 43211 1235677777765444 355677654 5777888887
Q ss_pred C-CCeEEEe
Q 015786 186 G-LTSVNIS 193 (400)
Q Consensus 186 g-~~~i~iS 193 (400)
| .+.|.+.
T Consensus 302 g~aD~V~~g 310 (671)
T 1ps9_A 302 GDADMVSMA 310 (671)
T ss_dssp TSCSEEEES
T ss_pred CCCCEEEeC
Confidence 7 8888875
No 259
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=28.90 E-value=1.8e+02 Score=24.57 Aligned_cols=78 Identities=15% Similarity=0.161 Sum_probs=48.7
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEECCC-cc-c-h--------hhHHHHHHHhhhcCCCceEEEEec------Ccch--hhh
Q 015786 118 SLNEILRLAYLFVTSGVDKIRLTGGE-PT-V-R--------KDIEEACFHLSKLKGLKTLAMTTN------GLTL--ARK 178 (400)
Q Consensus 118 s~e~i~~ii~~~~~~g~~~i~~~GGE-Pl-l-~--------~~l~~~i~~~~~~~g~~~~~i~TN------G~ll--~~~ 178 (400)
..+.+.+.++.+.++|...|.+..|. |- . . ..+.++.+.+++. |+ .+.+.+. +..+ .+.
T Consensus 83 ~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~-gv-~l~~E~~~~~~~~~~~~~~~~~ 160 (260)
T 1k77_A 83 AHADIDLALEYALALNCEQVHVMAGVVPAGEDAERYRAVFIDNIRYAADRFAPH-GK-RILVEALSPGVKPHYLFSSQYQ 160 (260)
T ss_dssp HHHHHHHHHHHHHHTTCSEEECCCCBCCTTSCHHHHHHHHHHHHHHHHHHHGGG-TC-EEEECCCCTTTSTTBSCCSHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHc-CC-EEEEEeCCccCCCcCccCCHHH
Confidence 46778888898899999999885443 21 1 1 1134555555554 88 7888764 3333 244
Q ss_pred HHHHH-HcCCCeEEEecCCC
Q 015786 179 LPKLK-ESGLTSVNISLDTL 197 (400)
Q Consensus 179 ~~~l~-~~g~~~i~iSldg~ 197 (400)
+..++ +.+-..+.+.+|..
T Consensus 161 ~~~l~~~~~~~~~g~~~D~~ 180 (260)
T 1k77_A 161 ALAIVEEVARDNVFIQLDTF 180 (260)
T ss_dssp HHHHHHHHCCTTEEEEEEHH
T ss_pred HHHHHHHhCCCCEEEEeeHH
Confidence 54544 44555788988873
No 260
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=28.88 E-value=2.6e+02 Score=26.45 Aligned_cols=138 Identities=11% Similarity=0.048 Sum_probs=81.5
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccc----------hhh-HHHHHHHhhhc--CCCceEEEEecCcchhhh----H
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTV----------RKD-IEEACFHLSKL--KGLKTLAMTTNGLTLARK----L 179 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll----------~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll~~~----~ 179 (400)
.+.+++.+.++.+.+.|.+.|.+-.|.|.. ..+ -.+.++.+++. .++ .+.+..|+..-.+. +
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~avG~d~-~L~vDan~~~t~~~A~~~~ 223 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKA-DLLFGTHGQFTTAGAIRLG 223 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSS-EEEECCCSCBCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHhCCCC-eEEEeCCCCCCHHHHHHHH
Confidence 478899888888888999999986544421 111 24566666654 245 78888998665332 3
Q ss_pred HHHHHcCCCeEEEecCCCCHHHHHHhhcCC--------CHHHHHHHHHHHHHcCCCcEEEEEEEec-CCChhHHHHHHHH
Q 015786 180 PKLKESGLTSVNISLDTLVPAKFEFLTRRK--------GHEKVMESINAAIEVGYNPVKVNCVVMR-GFNDDEICDFVEL 250 (400)
Q Consensus 180 ~~l~~~g~~~i~iSldg~~~~~~~~ir~~~--------~~~~v~~~i~~l~~~g~~~v~i~~~v~~-~~n~~el~~l~~~ 250 (400)
+.|.+.++.+|.=.+...+.+.+..++..- ++.. ...++.+.+.|.-.+ ++.-+.+ | -..+..++.++
T Consensus 224 ~~Le~~~i~~iEeP~~~~~~~~~~~l~~~~~iPIa~dE~~~~-~~~~~~~l~~g~~D~-v~~d~~~~G-Git~~~kia~l 300 (433)
T 3rcy_A 224 QAIEPYSPLWYEEPVPPDNVGAMAQVARAVRIPVATGERLTT-KAEFAPVLREGAAAI-LQPALGRAG-GIWEMKKVAAM 300 (433)
T ss_dssp HHHGGGCCSEEECCSCTTCHHHHHHHHHHSSSCEEECTTCCS-HHHHHHHHHTTCCSE-ECCCHHHHT-HHHHHHHHHHH
T ss_pred HHhhhcCCCEEECCCChhhHHHHHHHHhccCCCEEecCCCCC-HHHHHHHHHcCCCCE-EEeCchhcC-CHHHHHHHHHH
Confidence 555567888887666544455566665321 1111 233444555543011 2222222 1 34677888889
Q ss_pred HHhCCCeE
Q 015786 251 TRDRPINI 258 (400)
Q Consensus 251 ~~~~gv~~ 258 (400)
++..|+.+
T Consensus 301 A~~~gv~~ 308 (433)
T 3rcy_A 301 AEVYNAQM 308 (433)
T ss_dssp HHTTTCEE
T ss_pred HHHcCCEE
Confidence 98888865
No 261
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=28.85 E-value=1.7e+02 Score=24.98 Aligned_cols=74 Identities=12% Similarity=0.115 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhCCCCEEEEECCCccc-------hhhHHHHHHHhhhcCCCceEEEEecCc------chhhhHHHHHHc
Q 015786 119 LNEILRLAYLFVTSGVDKIRLTGGEPTV-------RKDIEEACFHLSKLKGLKTLAMTTNGL------TLARKLPKLKES 185 (400)
Q Consensus 119 ~e~i~~ii~~~~~~g~~~i~~~GGEPll-------~~~l~~~i~~~~~~~g~~~~~i~TNG~------ll~~~~~~l~~~ 185 (400)
.+.+.+.++.+.++|...|.+.+|..-- ...+.++.+.+++. |+ .+.+.+.+. ...+....+.+.
T Consensus 84 ~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~l~~l~~~a~~~-gv-~l~~E~~~~~~~~~~~~~~~~~l~~~v 161 (272)
T 2q02_A 84 VKKTEGLLRDAQGVGARALVLCPLNDGTIVPPEVTVEAIKRLSDLFARY-DI-QGLVEPLGFRVSSLRSAVWAQQLIREA 161 (272)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCSSBCCCHHHHHHHHHHHHHHHHTT-TC-EEEECCCCSTTCSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEccCCCchhHHHHHHHHHHHHHHHHHHHc-CC-EEEEEecCCCcccccCHHHHHHHHHHh
Q ss_pred CCCeEEEecC
Q 015786 186 GLTSVNISLD 195 (400)
Q Consensus 186 g~~~i~iSld 195 (400)
+ ..+.+.+|
T Consensus 162 ~-~~~g~~~D 170 (272)
T 2q02_A 162 G-SPFKVLLD 170 (272)
T ss_dssp T-CCCEEEEE
T ss_pred C-cCeEEEEE
No 262
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=28.78 E-value=3.5e+02 Score=24.98 Aligned_cols=140 Identities=11% Similarity=0.007 Sum_probs=80.0
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEEC------CCccc----------hhh-HHHHHHHhhhc--CCCceEEEEecCcch
Q 015786 115 QLLSLNEILRLAYLFVTSGVDKIRLTG------GEPTV----------RKD-IEEACFHLSKL--KGLKTLAMTTNGLTL 175 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g~~~i~~~G------GEPll----------~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll 175 (400)
..++.+++.+.+..+.+.|...|.+.. |.+++ ..+ ..+.++.+++. ..+ .+.+.-|+..-
T Consensus 143 ~~~~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~avG~d~-~l~vDan~~~~ 221 (403)
T 2ox4_A 143 SKGRKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAVGPDV-DIIVENHGHTD 221 (403)
T ss_dssp CCCSHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHHCTTS-EEEEECTTCSC
T ss_pred ccCCHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHhCCCC-eEEEECCCCCC
Confidence 346889988888888888988888863 43222 112 34666666653 245 78899998654
Q ss_pred hhh----HHHHHHcCCCeEEEecCCCCHHHHHHhhcC--------CCHHHHHHHHHHHHHcCCCcEEEEEEEec-CCChh
Q 015786 176 ARK----LPKLKESGLTSVNISLDTLVPAKFEFLTRR--------KGHEKVMESINAAIEVGYNPVKVNCVVMR-GFNDD 242 (400)
Q Consensus 176 ~~~----~~~l~~~g~~~i~iSldg~~~~~~~~ir~~--------~~~~~v~~~i~~l~~~g~~~v~i~~~v~~-~~n~~ 242 (400)
.+. ++.|.+.++.+|-=.+...+-+.+..++.. ..+.. .+.++.+.+.+.-. .++.-+.+ | ...
T Consensus 222 ~~~ai~~~~~l~~~~i~~iE~P~~~~d~~~~~~l~~~~~iPIa~dE~~~~-~~~~~~~i~~~~~d-~v~ik~~~~G-Git 298 (403)
T 2ox4_A 222 LVSAIQFAKAIEEFNIFFYEEINTPLNPRLLKEAKKKIDIPLASGERIYS-RWGFLPFLEDRSID-VIQPDLGTCG-GFT 298 (403)
T ss_dssp HHHHHHHHHHHGGGCEEEEECCSCTTSTHHHHHHHHTCCSCEEECTTCCH-HHHHHHHHHTTCCS-EECCCHHHHT-HHH
T ss_pred HHHHHHHHHHHHhhCCCEEeCCCChhhHHHHHHHHHhCCCCEEecCCcCC-HHHHHHHHHcCCCC-EEecCccccC-CHH
Confidence 322 244445666666544443334555555532 12222 44556666665401 11211111 1 345
Q ss_pred HHHHHHHHHHhCCCeE
Q 015786 243 EICDFVELTRDRPINI 258 (400)
Q Consensus 243 el~~l~~~~~~~gv~~ 258 (400)
+..+++++++..|+.+
T Consensus 299 e~~~i~~~A~~~g~~~ 314 (403)
T 2ox4_A 299 EFKKIADMAHIFEVTV 314 (403)
T ss_dssp HHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHcCCEE
Confidence 6788888999988764
No 263
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=28.75 E-value=3e+02 Score=24.92 Aligned_cols=136 Identities=11% Similarity=0.044 Sum_probs=76.5
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcC--CCceEEEEecCcch-hh---hHHHHHHcCCCeEE
Q 015786 118 SLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLK--GLKTLAMTTNGLTL-AR---KLPKLKESGLTSVN 191 (400)
Q Consensus 118 s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~--g~~~~~i~TNG~ll-~~---~~~~l~~~g~~~i~ 191 (400)
+.+++.+.+..+.+.|...|.+..|.+-+.. ..+.++.+++.- ++ .+.+.-|+..- ++ .++.|.+.++.+|.
T Consensus 144 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~-~~e~v~avr~a~g~~~-~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE 221 (359)
T 1mdl_A 144 GVKLATERAVTAAELGFRAVKTRIGYPALDQ-DLAVVRSIRQAVGDDF-GIMVDYNQSLDVPAAIKRSQALQQEGVTWIE 221 (359)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSHHH-HHHHHHHHHHHHCSSS-EEEEECTTCSCHHHHHHHHHHHHHHTCSCEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHH-HHHHHHHHHHHhCCCC-EEEEECCCCCCHHHHHHHHHHHHHhCCCeEE
Confidence 5677777777778889999999877533322 345666666532 45 68899997653 32 23556677888776
Q ss_pred EecCCCCHHHHHHhhcC--------CCHHHHHHHHHHHHHcCCCcEEEEEEEec-CCChhHHHHHHHHHHhCCCeE
Q 015786 192 ISLDTLVPAKFEFLTRR--------KGHEKVMESINAAIEVGYNPVKVNCVVMR-GFNDDEICDFVELTRDRPINI 258 (400)
Q Consensus 192 iSldg~~~~~~~~ir~~--------~~~~~v~~~i~~l~~~g~~~v~i~~~v~~-~~n~~el~~l~~~~~~~gv~~ 258 (400)
=.+...+-+.+..++.. .++.. .+.++.+.+.+.-. .++.-+.+ | ...+..++.++++..|+.+
T Consensus 222 ~P~~~~~~~~~~~l~~~~~iPI~~de~~~~-~~~~~~~i~~~~~d-~v~ik~~~~G-Gi~~~~~i~~~A~~~g~~~ 294 (359)
T 1mdl_A 222 EPTLQHDYEGHQRIQSKLNVPVQMGENWLG-PEEMFKALSIGACR-LAMPDAMKIG-GVTGWIRASALAQQFGIPM 294 (359)
T ss_dssp CCSCTTCHHHHHHHHHTCSSCEEECTTCCS-HHHHHHHHHTTCCS-EECCBTTTTT-HHHHHHHHHHHHHHTTCCB
T ss_pred CCCChhhHHHHHHHHHhCCCCEEeCCCCCC-HHHHHHHHHcCCCC-EEeecchhhC-CHHHHHHHHHHHHHcCCeE
Confidence 55543334445555432 11111 33344444444301 11111111 1 2456777888888877653
No 264
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A*
Probab=28.70 E-value=2.8e+02 Score=24.71 Aligned_cols=124 Identities=14% Similarity=0.172 Sum_probs=62.5
Q ss_pred CHHHHHHHHHHHHhCCCCEEEE---ECCCccchhhHHHHHHHhhhcCCC--ceEEEEecCcc-------hhhhH-HHHHH
Q 015786 118 SLNEILRLAYLFVTSGVDKIRL---TGGEPTVRKDIEEACFHLSKLKGL--KTLAMTTNGLT-------LARKL-PKLKE 184 (400)
Q Consensus 118 s~e~i~~ii~~~~~~g~~~i~~---~GGEPll~~~l~~~i~~~~~~~g~--~~~~i~TNG~l-------l~~~~-~~l~~ 184 (400)
+.++..++++.+.+.|+..|.- +|.|.. +-+.++......++ ..+.|+|-... +.+.+ ..|..
T Consensus 24 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~E~~----lG~al~~~~~~~~~~R~~v~I~TK~~~~~~~~~~i~~~~~~SL~r 99 (316)
T 3o3r_A 24 PPGQVKEAVKAAIDAGYRHFDCAYVYQNESE----VGEAIQEKIKEKAVRREDLFIVSKLWSTFFEKSLMKEAFQKTLSD 99 (316)
T ss_dssp CTTHHHHHHHHHHHTTCCEEECCGGGSCHHH----HHHHHHHHHHTTSCCGGGCEEEEEECGGGCSHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCEEEccCccCCHHH----HHHHHHHHHhhCCCChHHcEEEeeeCCCcCCHHHHHHHHHHHHHH
Confidence 3467888888888999877653 454433 33444432111111 14677775422 11223 44556
Q ss_pred cCCCeEEEecCC-CCH-----HHH------HHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHH
Q 015786 185 SGLTSVNISLDT-LVP-----AKF------EFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVE 249 (400)
Q Consensus 185 ~g~~~i~iSldg-~~~-----~~~------~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~ 249 (400)
.|.++|-+=+=. ++. ..+ +.......++.++++++.|++.|. |+.+=..+++.+++.++++
T Consensus 100 L~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gk----ir~iGvSn~~~~~l~~~~~ 172 (316)
T 3o3r_A 100 LKLDYLDLYLIHWPQGLQAGKEFLPKDSQGKVLMSKSTFLDAWEGMEELVDQGL----VKALGVSNFNHFQIERLLN 172 (316)
T ss_dssp HTCSCEEEEEESCSSCBCCSSCSSCBCTTSCBCBCSCCHHHHHHHHHHHHHTTS----EEEEEEESCCHHHHHHHHT
T ss_pred cCCCeeeEEEEcCCccccCcccccccccccccccccccHHHHHHHHHHHHHcCC----CcEEEEecCCHHHHHHHHH
Confidence 676666543222 110 000 000012347889999999999886 2222222345555555443
No 265
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=28.66 E-value=2e+02 Score=26.49 Aligned_cols=8 Identities=0% Similarity=0.110 Sum_probs=4.4
Q ss_pred ccEEEEEc
Q 015786 84 HTYLRISL 91 (400)
Q Consensus 84 ~~~l~i~i 91 (400)
.+-|.|+.
T Consensus 175 fDgVeih~ 182 (364)
T 1vyr_A 175 FDLVELHS 182 (364)
T ss_dssp CSEEEEEE
T ss_pred CCEEEEcC
Confidence 45566654
No 266
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=28.54 E-value=1.3e+02 Score=27.93 Aligned_cols=60 Identities=12% Similarity=0.089 Sum_probs=42.6
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEE--C-----------C---------------------CccchhhHHHHHHHhhh
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLT--G-----------G---------------------EPTVRKDIEEACFHLSK 159 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~--G-----------G---------------------EPll~~~l~~~i~~~~~ 159 (400)
+..++.+.++++|+.+...+...+.++ - | ......++.++++++++
T Consensus 27 R~f~~~~~ik~~id~mA~~KlN~lH~HltDdq~~rle~~~~~~~~~~~~~~~~g~~~~~~~~~g~YT~~di~eiv~YA~~ 106 (367)
T 1yht_A 27 RHFYSPEVIKSFIDTISLSGGNFLHLHFSDHENYAIESHLLNQRAENAVQGKDGIYINPYTGKPFLSYRQLDDIKAYAKA 106 (367)
T ss_dssp SSCCCHHHHHHHHHHHHHTTCCEEEEECBSSSCBCBCBTTTTBCGGGSEECTTSCEECTTTCCEEBCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEEEEEcCCCceeeecchhhhhhhhccccCCCcCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 456899999999999998877666553 1 1 12334569999999998
Q ss_pred cCCCceE--EEEecCcch
Q 015786 160 LKGLKTL--AMTTNGLTL 175 (400)
Q Consensus 160 ~~g~~~~--~i~TNG~ll 175 (400)
. || .| .|.+=|...
T Consensus 107 r-gI-~VIPEID~PGH~~ 122 (367)
T 1yht_A 107 K-GI-ELIPELDSPNHMT 122 (367)
T ss_dssp T-TC-EEEEEEEESSSCH
T ss_pred c-CC-EEEEeccchHHHH
Confidence 5 88 34 467777543
No 267
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=28.47 E-value=3.5e+02 Score=24.83 Aligned_cols=135 Identities=10% Similarity=0.009 Sum_probs=82.1
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhh-HHHHHHHhhhcCC-CceEEEEecCcch-hh---hHHHHHHcCCCeE
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKD-IEEACFHLSKLKG-LKTLAMTTNGLTL-AR---KLPKLKESGLTSV 190 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~-l~~~i~~~~~~~g-~~~~~i~TNG~ll-~~---~~~~l~~~g~~~i 190 (400)
.+.+++.+.+..+.+.|...|.+-.|. .++ ..++++.+++.-| + .+.+.-|+..- ++ .++.|.+.++++|
T Consensus 146 ~~~e~~~~~a~~~~~~Gf~~iKik~g~---~~~~~~e~v~avr~a~gd~-~l~vD~n~~~~~~~a~~~~~~l~~~~i~~i 221 (384)
T 2pgw_A 146 ETAEELARDAAVGHAQGERVFYLKVGR---GEKLDLEITAAVRGEIGDA-RLRLDANEGWSVHDAINMCRKLEKYDIEFI 221 (384)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEECCS---CHHHHHHHHHHHHTTSTTC-EEEEECTTCCCHHHHHHHHHHHGGGCCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECcCC---CHHHHHHHHHHHHHHcCCc-EEEEecCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 367888888888888899999997654 333 3577888876544 4 68888887653 32 2355556788888
Q ss_pred EEecCCCCHHHHHHhhcC--------CCHHHHHHHHHHHHHcCCCcEEEEEEEec-CCChhHHHHHHHHHHhCCCeE
Q 015786 191 NISLDTLVPAKFEFLTRR--------KGHEKVMESINAAIEVGYNPVKVNCVVMR-GFNDDEICDFVELTRDRPINI 258 (400)
Q Consensus 191 ~iSldg~~~~~~~~ir~~--------~~~~~v~~~i~~l~~~g~~~v~i~~~v~~-~~n~~el~~l~~~~~~~gv~~ 258 (400)
.=.+...+-+.+..++.. +++. -.+.++.+.+.|. -=.++.-+.+ | ...+..++.++++..|+.+
T Consensus 222 EqP~~~~~~~~~~~l~~~~~iPI~~de~i~-~~~~~~~~i~~~~-~d~v~ik~~~~G-Git~~~~i~~~A~~~g~~~ 295 (384)
T 2pgw_A 222 EQPTVSWSIPAMAHVREKVGIPIVADQAAF-TLYDVYEICRQRA-ADMICIGPREIG-GIQPMMKAAAVAEAAGLKI 295 (384)
T ss_dssp ECCSCTTCHHHHHHHHHHCSSCEEESTTCC-SHHHHHHHHHTTC-CSEEEECHHHHT-SHHHHHHHHHHHHHTTCCE
T ss_pred eCCCChhhHHHHHHHHhhCCCCEEEeCCcC-CHHHHHHHHHcCC-CCEEEEcchhhC-CHHHHHHHHHHHHHCCCeE
Confidence 765554444555555431 1111 1234445555543 1112222222 2 5677888899999988865
No 268
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=28.41 E-value=2.7e+02 Score=23.56 Aligned_cols=114 Identities=17% Similarity=0.107 Sum_probs=55.9
Q ss_pred HHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCC-eE-EEecCCCCHH
Q 015786 123 LRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLT-SV-NISLDTLVPA 200 (400)
Q Consensus 123 ~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~-~i-~iSldg~~~~ 200 (400)
.+.++.+.+.|...|.+ +.+|. .+..++++.+++. |. .+.+.-+.....+.+..+.+. .+ .+ .++++|....
T Consensus 98 ~~~~~~~~~~Gad~v~~-~~~~~--~~~~~~~~~~~~~-g~-~~~~~i~~~t~~e~~~~~~~~-~d~~i~~~~~~G~~g~ 171 (248)
T 1geq_A 98 RNFLAEAKASGVDGILV-VDLPV--FHAKEFTEIAREE-GI-KTVFLAAPNTPDERLKVIDDM-TTGFVYLVSLYGTTGA 171 (248)
T ss_dssp HHHHHHHHHHTCCEEEE-TTCCG--GGHHHHHHHHHHH-TC-EEEEEECTTCCHHHHHHHHHH-CSSEEEEECCC-----
T ss_pred HHHHHHHHHCCCCEEEE-CCCCh--hhHHHHHHHHHHh-CC-CeEEEECCCCHHHHHHHHHhc-CCCeEEEEECCccCCC
Confidence 34555666677777777 45554 3455666666664 55 333333333333445555443 22 22 3566653211
Q ss_pred HHHHhhcCCCHHHHHHHHHHHHHc-CCCcEEEEEEEecCCCh-hHHHHHHHHHHhCCCe
Q 015786 201 KFEFLTRRKGHEKVMESINAAIEV-GYNPVKVNCVVMRGFND-DEICDFVELTRDRPIN 257 (400)
Q Consensus 201 ~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~~v~~~~n~-~el~~l~~~~~~~gv~ 257 (400)
.. +.-...++.++.+++. ++ + +.+.-|.+. +++.++++ .|++
T Consensus 172 ~~------~~~~~~~~~i~~l~~~~~~-p----i~~~GGI~~~e~i~~~~~----~Gad 215 (248)
T 1geq_A 172 RE------EIPKTAYDLLRRAKRICRN-K----VAVGFGVSKREHVVSLLK----EGAN 215 (248)
T ss_dssp --------CCCHHHHHHHHHHHHHCSS-C----EEEESCCCSHHHHHHHHH----TTCS
T ss_pred CC------CCChhHHHHHHHHHhhcCC-C----EEEEeecCCHHHHHHHHH----cCCC
Confidence 10 0013445666666654 33 3 334446666 77777654 3664
No 269
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=28.35 E-value=2.5e+02 Score=24.77 Aligned_cols=75 Identities=9% Similarity=0.091 Sum_probs=50.1
Q ss_pred CHHHHHHHHHHHHh-CCCCEEEEECCCccc---------hhh-HHHHHHHhhhcCCCceEEEEec--CcchhhhHHHHHH
Q 015786 118 SLNEILRLAYLFVT-SGVDKIRLTGGEPTV---------RKD-IEEACFHLSKLKGLKTLAMTTN--GLTLARKLPKLKE 184 (400)
Q Consensus 118 s~e~i~~ii~~~~~-~g~~~i~~~GGEPll---------~~~-l~~~i~~~~~~~g~~~~~i~TN--G~ll~~~~~~l~~ 184 (400)
+.+++.+.++.+.+ .|...|.+.-+-|.. +++ +.++++.+++.-++ .+.+-.. -..+.+.+..+.+
T Consensus 109 ~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~-pv~vk~~~~~~~~~~~a~~l~~ 187 (311)
T 1ep3_A 109 EEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKV-PLYVKLSPNVTDIVPIAKAVEA 187 (311)
T ss_dssp SHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSS-CEEEEECSCSSCSHHHHHHHHH
T ss_pred CHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCC-CEEEEECCChHHHHHHHHHHHH
Confidence 47888888888877 788877776565543 233 47888888775355 4444333 2223455688889
Q ss_pred cCCCeEEEe
Q 015786 185 SGLTSVNIS 193 (400)
Q Consensus 185 ~g~~~i~iS 193 (400)
.|++.|.++
T Consensus 188 ~G~d~i~v~ 196 (311)
T 1ep3_A 188 AGADGLTMI 196 (311)
T ss_dssp TTCSEEEEC
T ss_pred cCCCEEEEe
Confidence 999999884
No 270
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=28.32 E-value=2e+02 Score=26.57 Aligned_cols=135 Identities=12% Similarity=0.035 Sum_probs=79.8
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcC--CCceEEEEecCcch-hh---hHHHHHHcCCCeEE
Q 015786 118 SLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLK--GLKTLAMTTNGLTL-AR---KLPKLKESGLTSVN 191 (400)
Q Consensus 118 s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~--g~~~~~i~TNG~ll-~~---~~~~l~~~g~~~i~ 191 (400)
+.+++.+.+..+.+.|...|.+..|.+-+ .. .+.++.+++.- ++ .+.+.-|+..- ++ .++.|.+.++++|.
T Consensus 164 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~-~~-~e~v~avr~a~g~d~-~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE 240 (388)
T 2nql_A 164 TLKARGELAKYWQDRGFNAFKFATPVADD-GP-AAEIANLRQVLGPQA-KIAADMHWNQTPERALELIAEMQPFDPWFAE 240 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTT-CH-HHHHHHHHHHHCTTS-EEEEECCSCSCHHHHHHHHHHHGGGCCSCEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCCCCCh-HH-HHHHHHHHHHhCCCC-EEEEECCCCCCHHHHHHHHHHHhhcCCCEEE
Confidence 67888888888888899999987653222 23 56666666532 45 68889997654 32 23455567888776
Q ss_pred EecCCCCHHHHHHhhcCCC--------HHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCCCeE
Q 015786 192 ISLDTLVPAKFEFLTRRKG--------HEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINI 258 (400)
Q Consensus 192 iSldg~~~~~~~~ir~~~~--------~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~~ 258 (400)
=.+...+-+.+..++..-+ +. -.+.++.+.+.|. -=.++.-+.+| ...+..++.++++..|+.+
T Consensus 241 qP~~~~d~~~~~~l~~~~~iPI~~dE~~~-~~~~~~~~i~~~~-~d~v~ik~~~G-Git~~~~i~~~A~~~g~~~ 312 (388)
T 2nql_A 241 APVWTEDIAGLEKVSKNTDVPIAVGEEWR-THWDMRARIERCR-IAIVQPEMGHK-GITNFIRIGALAAEHGIDV 312 (388)
T ss_dssp CCSCTTCHHHHHHHHTSCCSCEEECTTCC-SHHHHHHHHTTSC-CSEECCCHHHH-CHHHHHHHHHHHHHHTCEE
T ss_pred CCCChhhHHHHHHHHhhCCCCEEEeCCcC-CHHHHHHHHHcCC-CCEEEecCCCC-CHHHHHHHHHHHHHcCCeE
Confidence 5554434455566654211 11 1234444444443 11122222233 5667788888888888754
No 271
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1
Probab=28.04 E-value=3.2e+02 Score=24.21 Aligned_cols=130 Identities=18% Similarity=0.173 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHhCCCCEEEE---ECCCccchhhHHHHHHHhhhcCCCceEEEEecCc-----chhhhH-HHHHHcCCCe
Q 015786 119 LNEILRLAYLFVTSGVDKIRL---TGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGL-----TLARKL-PKLKESGLTS 189 (400)
Q Consensus 119 ~e~i~~ii~~~~~~g~~~i~~---~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~-----ll~~~~-~~l~~~g~~~ 189 (400)
.++..++++.+.+.|+..|.- +|.|.. +-+.++... . .-..+.|+|-.. .+.+.+ ..|.+.|.++
T Consensus 48 ~~~~~~~l~~Al~~Gi~~~DTA~~Yg~E~~----vG~al~~~~-~-~R~~v~I~TK~~~~~~~~v~~~~e~SL~rLg~dy 121 (296)
T 1mzr_A 48 NEEVITAIQKALEVGYRSIDTAAAYKNEEG----VGKALKNAS-V-NREELFITTKLWNDDHKRPREALLDSLKKLQLDY 121 (296)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCGGGTCHHH----HHHHHHHSC-S-CGGGCEEEEEECGGGTTCHHHHHHHHHHHHTCSC
T ss_pred HHHHHHHHHHHHHcCCCEEECCccccCHHH----HHHHHHhcC-C-CcccEEEEeccCCCcHHHHHHHHHHHHHHhCCCc
Confidence 578888999888999877653 343322 333343210 0 011466777532 122333 4455667766
Q ss_pred EEEec-CCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCCCeEEEEeeecC
Q 015786 190 VNISL-DTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINIRFIEFMPF 266 (400)
Q Consensus 190 i~iSl-dg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~~~~~~~~p~ 266 (400)
|-+=+ ..+++. ...++.++++++.+++.|. |+.+=..+++.+++.++++... ....+..+++.|.
T Consensus 122 iDl~llH~p~~~-------~~~~~e~~~al~~l~~~Gk----ir~iGvSn~~~~~l~~~~~~~~-~~p~v~Q~~~~~~ 187 (296)
T 1mzr_A 122 IDLYLMHWPVPA-------IDHYVEAWKGMIELQKEGL----IKSIGVCNFQIHHLQRLIDETG-VTPVINQIELHPL 187 (296)
T ss_dssp EEEEEESCCCTT-------TCCHHHHHHHHHHHHHTTS----EEEEEEESCCHHHHHHHHHHHS-CCCSEEEEECBTT
T ss_pred EEEEEEccCCCC-------cCCHHHHHHHHHHHHHCCC----cCEEEEeCCCHHHHHHHHHhcC-CCceEEeeecccc
Confidence 65433 232221 1247888999999999886 2332222456677777766543 2223444455443
No 272
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=28.00 E-value=91 Score=29.49 Aligned_cols=52 Identities=15% Similarity=0.201 Sum_probs=36.5
Q ss_pred CCCHHHHHHHHHHHHHcCCCcEEEEEEE----------------ecCC-ChhHHHHHHHHHHhCCCeEE
Q 015786 208 RKGHEKVMESINAAIEVGYNPVKVNCVV----------------MRGF-NDDEICDFVELTRDRPINIR 259 (400)
Q Consensus 208 ~~~~~~v~~~i~~l~~~g~~~v~i~~~v----------------~~~~-n~~el~~l~~~~~~~gv~~~ 259 (400)
.++|..+.+.|..|+++|+..|.+.-+. .+.. +.+++.++++.+++.|+.+.
T Consensus 19 ~Gd~~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~Vi 87 (441)
T 1lwj_A 19 VGDFRGLKNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVV 87 (441)
T ss_dssp SCCHHHHHHTHHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEE
T ss_pred ccCHHHHHHhhHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEE
Confidence 4568888888888888888444443222 1111 56789999999999999763
No 273
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=27.73 E-value=2.8e+02 Score=23.58 Aligned_cols=42 Identities=17% Similarity=0.122 Sum_probs=25.9
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCc
Q 015786 116 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLK 164 (400)
Q Consensus 116 ~~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~ 164 (400)
.+++++ .++.+++.|...|.+.+ |. ..+..++.+.+++. |+.
T Consensus 22 ~~~~~~---~l~~~~~~G~~~vEl~~--~~-~~~~~~~~~~l~~~-gl~ 63 (269)
T 3ngf_A 22 EVPFLE---RFRLAAEAGFGGVEFLF--PY-DFDADVIARELKQH-NLT 63 (269)
T ss_dssp TSCHHH---HHHHHHHTTCSEEECSC--CT-TSCHHHHHHHHHHT-TCE
T ss_pred cCCHHH---HHHHHHHcCCCEEEecC--Cc-cCCHHHHHHHHHHc-CCc
Confidence 456555 45555678888888876 21 12456666666664 773
No 274
>3s5u_A Putative uncharacterized protein; crispr, crispr adaptation mechanism, NEW spacer aquisition, binding, DNA binding protein; 2.70A {Enterococcus faecalis}
Probab=27.68 E-value=1.4e+02 Score=25.48 Aligned_cols=56 Identities=20% Similarity=0.196 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCCCeEEEEeeecC
Q 015786 211 HEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINIRFIEFMPF 266 (400)
Q Consensus 211 ~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~~~~~~~~p~ 266 (400)
|+++++-++.+.+...+++-+-+.+..-.+.+|+.++.+++....+.+-++++...
T Consensus 146 ~e~i~~~lki~~el~~kkllvfvNl~~YLt~eEl~~L~e~i~~~~i~vL~IE~~~~ 201 (220)
T 3s5u_A 146 FEKVMEITQVHRYLSKKKLLIFINACTYLTEDEVQQVVEYISLNNVDVLFLEQRVV 201 (220)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEESGGGGCCHHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEChHHhCCHHHHHHHHHHHHHhCCeEEEEecccc
Confidence 89999999999999775666666555556889999999999999999888887643
No 275
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=27.39 E-value=1.8e+02 Score=26.53 Aligned_cols=80 Identities=18% Similarity=0.235 Sum_probs=0.0
Q ss_pred CCCCCCCHHHHHHHHHHHHhC-------CCCEEEEE----------------------CCCccchhhH-HHHHHHhhhcC
Q 015786 112 PKPQLLSLNEILRLAYLFVTS-------GVDKIRLT----------------------GGEPTVRKDI-EEACFHLSKLK 161 (400)
Q Consensus 112 ~~~~~~s~e~i~~ii~~~~~~-------g~~~i~~~----------------------GGEPll~~~l-~~~i~~~~~~~ 161 (400)
...+.|+.++|.++++.+.+. |.+.|.+. ||...-+..| .++++.+++.-
T Consensus 128 ~~p~~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~av 207 (343)
T 3kru_A 128 KLPRELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNW 207 (343)
T ss_dssp CCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTS
T ss_pred cCchhcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcC
Q ss_pred --CCceEEEEecCc----------chhhhHHHHHHcCCCeEEEe
Q 015786 162 --GLKTLAMTTNGL----------TLARKLPKLKESGLTSVNIS 193 (400)
Q Consensus 162 --g~~~~~i~TNG~----------ll~~~~~~l~~~g~~~i~iS 193 (400)
.+ .+.+--++. ...+.+..|.+. ++.|.+|
T Consensus 208 g~d~-pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs 249 (343)
T 3kru_A 208 PENK-PIFVRVSADDYMEGGINIDMMVEYINMIKDK-VDLIDVS 249 (343)
T ss_dssp CTTS-CEEEEEECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEEE
T ss_pred CccC-CeEEEeechhhhccCccHHHHHHHHHHhhcc-ccEEecc
No 276
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=27.36 E-value=3.4e+02 Score=24.31 Aligned_cols=101 Identities=15% Similarity=0.152 Sum_probs=62.0
Q ss_pred hhHHHHHHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCCC
Q 015786 177 RKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPI 256 (400)
Q Consensus 177 ~~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv 256 (400)
+.++.|...+.+.|+|.- |. ++..-...++....+++.|+ .+....+... .|.+++.+++.-+.+.|+
T Consensus 33 ~~~~~L~~~~pd~vsVT~-~~---------~g~~r~~t~~~a~~i~~~g~-~~i~Hltc~~-~~~~~l~~~L~~~~~~GI 100 (310)
T 3apt_A 33 RTLEELKAFRPAFVSITY-GA---------MGSTRERSVAWAQRIQSLGL-NPLAHLTVAG-QSRKEVAEVLHRFVESGV 100 (310)
T ss_dssp HHHHHHGGGCCSEEEECC-CS---------TTCSHHHHHHHHHHHHHTTC-CBCEEEECTT-SCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCCCCEEEEec-CC---------CCCcchhHHHHHHHHHHhCC-CeEEEeecCC-CCHHHHHHHHHHHHHCCC
Confidence 344556666678888763 21 11224456777777777888 6666666554 799999999999999998
Q ss_pred e-EEEEeeecCCC-CCCcc--cCCCCHHHHHHHHHHh
Q 015786 257 N-IRFIEFMPFDG-NVWNV--KKLVPYAEMLDTVVKK 289 (400)
Q Consensus 257 ~-~~~~~~~p~~~-~~~~~--~~~~~~~e~~~~i~~~ 289 (400)
. +-.+.=-|..+ ..|.. ..+....++++.+++.
T Consensus 101 ~niLaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~ 137 (310)
T 3apt_A 101 ENLLALRGDPPRGERVFRPHPEGFRYAAELVALIRER 137 (310)
T ss_dssp CEEEEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHH
T ss_pred CEEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHh
Confidence 4 44443333322 22221 1234566777777765
No 277
>3qhq_A CSN2, SAG0897 family crispr-associated protein; helicase, transferase; 2.00A {Streptococcus agalactiae} PDB: 3toc_A 3v7f_A
Probab=27.36 E-value=1.4e+02 Score=25.57 Aligned_cols=56 Identities=18% Similarity=0.103 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCCCeEEEEeeecC
Q 015786 211 HEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINIRFIEFMPF 266 (400)
Q Consensus 211 ~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~~~~~~~~p~ 266 (400)
|+++++-++.+.+...+++-+-+.+..-.+.+|+.++.+++....+.+-++++...
T Consensus 146 ~eki~~~lki~~el~~kkllvfvNl~~YLt~eEl~~L~e~i~~~~i~vLlIE~~~~ 201 (229)
T 3qhq_A 146 FEKCFEIIQVYHYLTKKNLLVFVNSGAYLTKDEVIKLCEYINLMQKSVLFLEPRRL 201 (229)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEESCGGGCCHHHHHHHHHHHHHHCSCEEEEESSCC
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEChHHhCCHHHHHHHHHHHHHhCCeEEEEecccc
Confidence 89999999999999775666666555556889999999999999999888877643
No 278
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=27.19 E-value=1.1e+02 Score=29.00 Aligned_cols=61 Identities=10% Similarity=0.131 Sum_probs=41.0
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEE--EEC----------------------------------------CCccchhhH
Q 015786 113 KPQLLSLNEILRLAYLFVTSGVDKIR--LTG----------------------------------------GEPTVRKDI 150 (400)
Q Consensus 113 ~~~~~s~e~i~~ii~~~~~~g~~~i~--~~G----------------------------------------GEPll~~~l 150 (400)
.+..++.+.++++|+.+...+...+. ++- |......++
T Consensus 15 aR~f~~~~~ik~~ID~mA~~KlN~lH~HLtDdgwr~ei~~~pl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~YT~~di 94 (434)
T 2yl6_A 15 GRKYFSPEQLKEIIDKAKHYGYTDLHLLVGNDGLRFMLDDMSITANGKTYASDDVKRAIEKGTNDYYNDPNGNHLTESQM 94 (434)
T ss_dssp TTSCCCHHHHHHHHHHHHHHTCCEEEEEEESSSBCEECSCCCEEETTEEECHHHHHHHHHHHHHHHCCCTTCSCEEHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCeEEEEecCCCcccccCCCceeeeeeccccccchhhhhcCCccccCCCCCCccCHHHH
Confidence 45678999999999999876655443 331 233344568
Q ss_pred HHHHHHhhhcCCCceE--EEEecCcch
Q 015786 151 EEACFHLSKLKGLKTL--AMTTNGLTL 175 (400)
Q Consensus 151 ~~~i~~~~~~~g~~~~--~i~TNG~ll 175 (400)
.+|++++++. || .| .|.+=|...
T Consensus 95 ~eIv~YA~~r-gI-~VIPEID~PGH~~ 119 (434)
T 2yl6_A 95 TDLINYAKDK-GI-GLIPTVNSPGHMD 119 (434)
T ss_dssp HHHHHHHHHT-TC-EEEEEEEESSSCH
T ss_pred HHHHHHHHHc-CC-EEEEeccccchHH
Confidence 8888888874 77 33 466767543
No 279
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=26.95 E-value=3.1e+02 Score=24.48 Aligned_cols=73 Identities=22% Similarity=0.198 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHhCCCCEEEEECCCccch-------------hh-HHHHHHHhhhcCCCceEEEEec-Ccchh---hhHH
Q 015786 119 LNEILRLAYLFVTSGVDKIRLTGGEPTVR-------------KD-IEEACFHLSKLKGLKTLAMTTN-GLTLA---RKLP 180 (400)
Q Consensus 119 ~e~i~~ii~~~~~~g~~~i~~~GGEPll~-------------~~-l~~~i~~~~~~~g~~~~~i~TN-G~ll~---~~~~ 180 (400)
++++.+.++.+.+. ...|.+.+|-|..+ ++ +.++++.+++.-++ .+.+-.. |...+ +.+.
T Consensus 70 ~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~-pv~vKir~G~~~~~~~~~a~ 147 (318)
T 1vhn_A 70 PNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSG-KFSVKTRLGWEKNEVEEIYR 147 (318)
T ss_dssp HHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSS-EEEEEEESCSSSCCHHHHHH
T ss_pred HHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCC-CEEEEecCCCChHHHHHHHH
Confidence 58888888888888 89999988777642 44 47888888875455 5555443 43332 4567
Q ss_pred HHHHcCCCeEEEe
Q 015786 181 KLKESGLTSVNIS 193 (400)
Q Consensus 181 ~l~~~g~~~i~iS 193 (400)
.+.+.|++.|.|+
T Consensus 148 ~l~~~G~d~i~v~ 160 (318)
T 1vhn_A 148 ILVEEGVDEVFIH 160 (318)
T ss_dssp HHHHTTCCEEEEE
T ss_pred HHHHhCCCEEEEc
Confidence 8888999999986
No 280
>3nd1_A Precorrin-6A synthase/COBF protein; methyltransferase, deacetylase, transferase; HET: SAH; 1.50A {Rhodobacter capsulatus}
Probab=26.88 E-value=62 Score=28.73 Aligned_cols=48 Identities=17% Similarity=0.051 Sum_probs=32.6
Q ss_pred HHHHHHHHHhC-CCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEe
Q 015786 122 ILRLAYLFVTS-GVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTT 170 (400)
Q Consensus 122 i~~ii~~~~~~-g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~T 170 (400)
+.+.+.+..+. |-..+.+++|+|+++--..++++.+.+..|+ .+.+.-
T Consensus 112 ~~~~i~~~l~~~G~~Va~l~~GDP~i~~~~~~l~~~l~~~~gi-~veviP 160 (275)
T 3nd1_A 112 WLSEITAHVPGLEGRVALLVWGDPSLYDSTLRIAERLKSRLPL-TTKVIP 160 (275)
T ss_dssp HHHHHHHHCTTSCEEEEEEESBCTTSSCSHHHHHHTTTTTSSE-EEEEEC
T ss_pred HHHHHHHHHHhCCCeEEEEeCCCCcccchHHHHHHHHHHhcCC-CEEEec
Confidence 33334334445 6566778899999998888888888763367 566643
No 281
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=26.47 E-value=3.8e+02 Score=24.65 Aligned_cols=137 Identities=13% Similarity=0.026 Sum_probs=77.1
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhc--CCCceEEEEecCcch-hh---hHHHHHHcCCCeE
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKL--KGLKTLAMTTNGLTL-AR---KLPKLKESGLTSV 190 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~--~g~~~~~i~TNG~ll-~~---~~~~l~~~g~~~i 190 (400)
.+.+++.+.+..+.+.|...|.+-.|.+-+..+ .+.++.+++. .++ .+.+.-|+..- ++ .++.|.+.++.+|
T Consensus 164 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~-~e~v~avr~a~g~~~-~l~vDan~~~~~~~a~~~~~~l~~~~i~~i 241 (392)
T 1tzz_A 164 KGLSMLRGEMRGYLDRGYNVVKMKIGGAPIEED-RMRIEAVLEEIGKDA-QLAVDANGRFNLETGIAYAKMLRDYPLFWY 241 (392)
T ss_dssp -CHHHHHHHHHHHHTTTCSEEEEECSSSCHHHH-HHHHHHHHHHHTTTC-EEEEECTTCCCHHHHHHHHHHHTTSCCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHH-HHHHHHHHHhcCCCC-eEEEECCCCCCHHHHHHHHHHHHHcCCCee
Confidence 367888888888888899999998776433322 4566666553 245 78899997654 33 2244555677776
Q ss_pred EEecCCCCHHHHHHhhcCC--------CHHHHHHHHHHHHHcC----CCcEEEEEEEecCCChhHHHHHHHHHHhCCCe
Q 015786 191 NISLDTLVPAKFEFLTRRK--------GHEKVMESINAAIEVG----YNPVKVNCVVMRGFNDDEICDFVELTRDRPIN 257 (400)
Q Consensus 191 ~iSldg~~~~~~~~ir~~~--------~~~~v~~~i~~l~~~g----~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~ 257 (400)
.=-+...+-+.+..++..- ++. -.+.++.+.+.| .-. .++.-+.+--...+..+++++++..|+.
T Consensus 242 EqP~~~~d~~~~~~l~~~~~iPIa~dE~~~-~~~~~~~~i~~~~~~~~~d-~v~ik~~~~GGit~~~~i~~~A~~~gi~ 318 (392)
T 1tzz_A 242 EEVGDPLDYALQAALAEFYPGPMATGENLF-SHQDARNLLRYGGMRPDRD-WLQFDCALSYGLCEYQRTLEVLKTHGWS 318 (392)
T ss_dssp ECCSCTTCHHHHHHHTTTCCSCEEECTTCC-SHHHHHHHHHHSCCCTTTC-EECCCTTTTTCHHHHHHHHHHHHHTTCC
T ss_pred cCCCChhhHHHHHHHHhhCCCCEEECCCCC-CHHHHHHHHHcCCCccCCc-EEEECccccCCHHHHHHHHHHHHHCCCC
Confidence 6444433445556665421 111 123344444544 201 1221111101346778888888888875
No 282
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=26.44 E-value=79 Score=30.70 Aligned_cols=52 Identities=10% Similarity=0.226 Sum_probs=36.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCcEEEEEEEe-cCC-----------------ChhHHHHHHHHHHhCCCeEE
Q 015786 208 RKGHEKVMESINAAIEVGYNPVKVNCVVM-RGF-----------------NDDEICDFVELTRDRPINIR 259 (400)
Q Consensus 208 ~~~~~~v~~~i~~l~~~g~~~v~i~~~v~-~~~-----------------n~~el~~l~~~~~~~gv~~~ 259 (400)
.++|.-+++.|..|+++|+..|.+.-+.- ++. +.+++++|++.+++.|+.|.
T Consensus 28 ~Gdl~Gi~~kLdYLk~LGvt~I~L~Pi~~~~~~~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~~Gi~Vi 97 (549)
T 4aie_A 28 IGDLQGIISRLDYLEKLGIDAIWLSPVYQSPGVDNGYDISDYEAIDPQYGTMADMDELISKAKEHHIKIV 97 (549)
T ss_dssp SCCHHHHHTTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEE
T ss_pred CcCHHHHHHhhHHHHHCCCCEEEeCCCcCCCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEE
Confidence 35688888888888888885555543331 110 45789999999999999754
No 283
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=26.41 E-value=97 Score=29.26 Aligned_cols=84 Identities=10% Similarity=0.038 Sum_probs=55.1
Q ss_pred hhhHHHHHHcCCCeEEEec------CCCCHHHHHHhhc-CCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCC--------
Q 015786 176 ARKLPKLKESGLTSVNISL------DTLVPAKFEFLTR-RKGHEKVMESINAAIEVGYNPVKVNCVVMRGFN-------- 240 (400)
Q Consensus 176 ~~~~~~l~~~g~~~i~iSl------dg~~~~~~~~ir~-~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n-------- 240 (400)
.+++..|++.|++.|-++- ++.+...|..+.. -++.+...+-++.+.+.|+ +|.+-.|+.. ..
T Consensus 39 ~~~Ldyl~~LGv~~i~l~Pi~~~~~~~y~~~dy~~idp~~Gt~~d~~~lv~~ah~~Gi-~vilD~V~NH-~s~~~wF~~q 116 (424)
T 2dh2_A 39 KGRLDYLSSLKVKGLVLGPIHKNQKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSI-RVILDLTPNY-RGENSWFSTQ 116 (424)
T ss_dssp HTTHHHHHHTTCSEEEECCCEEECTTCSTTEEEEEECGGGCCHHHHHHHHHHHHHTTC-EEEEECCTTT-TSSSTTCSSC
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCC-EEEEEECCCc-CCCccccccc
Confidence 5788899999999999982 2222112222222 2447888888888999999 7877776642 11
Q ss_pred ----hhHHHHHHHHHHhCCCeEEEE
Q 015786 241 ----DDEICDFVELTRDRPINIRFI 261 (400)
Q Consensus 241 ----~~el~~l~~~~~~~gv~~~~~ 261 (400)
.+++.+.+++..+.|++-..+
T Consensus 117 ~~~Vr~~~~~~~~~Wl~~gvDGfRl 141 (424)
T 2dh2_A 117 VDTVATKVKDALEFWLQAGVDGFQV 141 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 135777788888877775444
No 284
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=26.38 E-value=1.9e+02 Score=21.14 Aligned_cols=30 Identities=10% Similarity=-0.021 Sum_probs=23.1
Q ss_pred ccchhhHHHHHHHhhhcCCCceEEEEecCcch
Q 015786 144 PTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL 175 (400)
Q Consensus 144 Pll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll 175 (400)
..+.|+..++++.+++. |+ .+.+.||+...
T Consensus 17 ~~~~~~~~~~l~~L~~~-G~-~~~i~S~~~~~ 46 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKN-GV-GTVILSNDPGG 46 (137)
T ss_dssp HHHHHHHHHHHHHHHHT-TC-EEEEEECSCCG
T ss_pred CccCccHHHHHHHHHHC-CC-EEEEEeCCCHH
Confidence 33567788999999885 88 78999998544
No 285
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=26.29 E-value=1.6e+02 Score=24.80 Aligned_cols=15 Identities=20% Similarity=0.282 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHH--cCC
Q 015786 212 EKVMESINAAIE--VGY 226 (400)
Q Consensus 212 ~~v~~~i~~l~~--~g~ 226 (400)
..+++.++.+++ .|.
T Consensus 120 ~~~i~~~~~ak~~~~Ga 136 (220)
T 3etn_A 120 REIVELTQLAHNLNPGL 136 (220)
T ss_dssp HHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHhcCCCC
Confidence 667888999999 887
No 286
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=25.97 E-value=74 Score=30.51 Aligned_cols=68 Identities=19% Similarity=0.200 Sum_probs=44.9
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCC
Q 015786 116 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLT 188 (400)
Q Consensus 116 ~~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~ 188 (400)
.+..+++.+.+.+..+.|-..+.+.+|+|+++--..++++.+.+. |+ .+.+.-.-+ .........|+.
T Consensus 276 ~~~~~~i~~~l~~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~-gi-~v~vvPGiS---s~~aa~a~~Gip 343 (457)
T 1pjq_A 276 CVPQEEINQILLREAQKGKRVVRLKGGDPFIFGRGGEELETLCHA-GI-PFSVVPGIT---AASGCSAYSGIP 343 (457)
T ss_dssp CCTTHHHHHHHHHHHHTTCEEEEEESBCTTTSSSHHHHHTTTTTT-TC-CEEEECCCC---HHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHHCCCcEEEEeCCCCCccCCHHHHHHHHHHC-CC-CEEEeCCHh---HHHHHHHHcCCC
Confidence 355677776665555666566778999999987777888888874 77 677755432 223444444543
No 287
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=25.94 E-value=2.4e+02 Score=26.13 Aligned_cols=84 Identities=17% Similarity=0.225 Sum_probs=51.7
Q ss_pred CCCCCCHHHHH-HHHHHH-------H-hCCCCEEEEECCC---------ccch---------------hh-HHHHHHHhh
Q 015786 113 KPQLLSLNEIL-RLAYLF-------V-TSGVDKIRLTGGE---------PTVR---------------KD-IEEACFHLS 158 (400)
Q Consensus 113 ~~~~~s~e~i~-~ii~~~-------~-~~g~~~i~~~GGE---------Pll~---------------~~-l~~~i~~~~ 158 (400)
..+.|+.++|. .+++.+ . +.|...|.|.+|. |..+ .. +.++++.++
T Consensus 159 ~pr~lt~~eI~~~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr 238 (379)
T 3aty_A 159 VPEELTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVC 238 (379)
T ss_dssp CCEECCHHHHHHTHHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHH
T ss_pred CCccCCHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHH
Confidence 35679999999 776544 5 6789999998764 3321 12 367777777
Q ss_pred hcCCCc--eEEEEecC--------cchh---hhHHHHHHcCCCeEEEecCC
Q 015786 159 KLKGLK--TLAMTTNG--------LTLA---RKLPKLKESGLTSVNISLDT 196 (400)
Q Consensus 159 ~~~g~~--~~~i~TNG--------~ll~---~~~~~l~~~g~~~i~iSldg 196 (400)
+.-|-. .+.|..+. ...+ +.++.|.+.|++.|.+|.-+
T Consensus 239 ~avg~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~ 289 (379)
T 3aty_A 239 DAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGD 289 (379)
T ss_dssp HHHCGGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSC
T ss_pred HhcCCCeEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCC
Confidence 643311 34444332 1122 23356667899999998744
No 288
>2blf_B SORB, sulfite\:cytochrome C oxidoreductase subunit B; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_B* 2c9x_B* 2ca3_B* 2ca4_B*
Probab=25.85 E-value=59 Score=22.67 Aligned_cols=51 Identities=14% Similarity=0.122 Sum_probs=35.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHh-CCCCEEEEECCCccchhhHHHHHHHhhh
Q 015786 98 RCHYCMPPEGVDLTPKPQLLSLNEILRLAYLFVT-SGVDKIRLTGGEPTVRKDIEEACFHLSK 159 (400)
Q Consensus 98 ~C~yC~~~~~~~~~~~~~~~s~e~i~~ii~~~~~-~g~~~i~~~GGEPll~~~l~~~i~~~~~ 159 (400)
+|.-|+...... .....++.+.|..++..+.+ .| -++...+...+++|+.+
T Consensus 28 ~C~~CH~~~~i~--~~p~~~~~~~W~~~v~~M~~~~g---------~~ls~~e~~~I~~YL~~ 79 (81)
T 2blf_B 28 NCAACHSVDYIN--TQPPGKGQAFWDAEVQKMIKVYH---------APVDEADAKAIADYLAK 79 (81)
T ss_dssp HTTSSSCTHHHH--TSCTTCCHHHHHHHHHHHHHTSC---------CCCCHHHHHHHHHHHHH
T ss_pred HHHHhcCCcccc--cCcCcCCHHHHHHHHHHHHHHcC---------CCCCHHHHHHHHHHHHH
Confidence 689998643111 11235789999999998875 33 46666778889998875
No 289
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=25.84 E-value=2.3e+02 Score=26.28 Aligned_cols=96 Identities=14% Similarity=0.085 Sum_probs=54.1
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchh-hhHHHHHHcC-CCeEEEec
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLA-RKLPKLKESG-LTSVNISL 194 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~-~~~~~l~~~g-~~~i~iSl 194 (400)
++.++..++++.+.+.++..|- ||+-..++ +..+.+++..++ -|.+.+.+.+ +.+..+++.+ ++.|++-+
T Consensus 205 ~~~~~a~~~~~~l~~~~i~~iE----qP~~~~d~-~~~~~l~~~~~i---PIa~dE~~~~~~~~~~~i~~~~~d~v~ik~ 276 (391)
T 2qgy_A 205 EDLDQTKSFLKEVSSFNPYWIE----EPVDGENI-SLLTEIKNTFNM---KVVTGEKQSGLVHFRELISRNAADIFNPDI 276 (391)
T ss_dssp SCHHHHHHHHHHHGGGCCSEEE----CSSCTTCH-HHHHHHHHHCSS---CEEECTTCCSHHHHHHHHHTTCCSEECCBT
T ss_pred CCHHHHHHHHHHHHhcCCCeEe----CCCChhhH-HHHHHHHhhCCC---CEEEcCCcCCHHHHHHHHHcCCCCEEEECc
Confidence 4567777777777666665543 56543233 333334433233 3455555443 4455555544 44444432
Q ss_pred CCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEE
Q 015786 195 DTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVN 232 (400)
Q Consensus 195 dg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~ 232 (400)
...+++...++.++.+.+.|+ ++.+.
T Consensus 277 -----------~~~GGit~~~~i~~~A~~~gi-~~~~~ 302 (391)
T 2qgy_A 277 -----------SGMGGLIDIIEISNEASNNGI-FISPH 302 (391)
T ss_dssp -----------TTSSCHHHHHHHHHHHHHTTC-EECCB
T ss_pred -----------chhCCHHHHHHHHHHHHHCCC-EEecc
Confidence 223568888999999999998 55444
No 290
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=25.72 E-value=2.6e+02 Score=24.74 Aligned_cols=78 Identities=15% Similarity=0.066 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEECCCccc-------------hh--------hHHHHHHHhhhcCCCceEEEEecCc-ch
Q 015786 118 SLNEILRLAYLFVTSGVDKIRLTGGEPTV-------------RK--------DIEEACFHLSKLKGLKTLAMTTNGL-TL 175 (400)
Q Consensus 118 s~e~i~~ii~~~~~~g~~~i~~~GGEPll-------------~~--------~l~~~i~~~~~~~g~~~~~i~TNG~-ll 175 (400)
..+.+.+.++.+.++|...|.+..|.+.. .. .+.++.+.+++. |+ .+.+.+... .+
T Consensus 109 ~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~-Gv-~l~lEn~~~~~~ 186 (340)
T 2zds_A 109 AAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAE-GV-RFAHEVHPSEIA 186 (340)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEECCTTSSC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHc-CC-EEEEEcCCCccc
Confidence 35677788888889999999887554320 11 133445555554 88 788877532 12
Q ss_pred --hhhHHHHHH-cC-CCeEEEecCCC
Q 015786 176 --ARKLPKLKE-SG-LTSVNISLDTL 197 (400)
Q Consensus 176 --~~~~~~l~~-~g-~~~i~iSldg~ 197 (400)
.+.+..+++ .+ -..+.+.+|..
T Consensus 187 ~~~~~~~~ll~~v~~~~~vg~~~D~~ 212 (340)
T 2zds_A 187 YDYWTTHRALEAVGHRPAFGLNFDPS 212 (340)
T ss_dssp CSHHHHHHHHHHTTTCTTEEEEECCH
T ss_pred CCHHHHHHHHHhcCCCCCeeEEEchh
Confidence 244555554 34 35799999984
No 291
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=25.60 E-value=1.1e+02 Score=25.03 Aligned_cols=91 Identities=15% Similarity=0.116 Sum_probs=48.2
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEC-CCccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCeEEEecC
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTG-GEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNISLD 195 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~G-GEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~iSld 195 (400)
++.+++.++++.+.+.. ..|.+.| |--..- -.++...+... |+ .+...+........+..+ ..+--.|.||..
T Consensus 29 l~~~~i~~~~~~i~~a~-~~I~i~G~G~S~~~--A~~~~~~l~~~-g~-~~~~~~~~~~~~~~~~~~-~~~dvvI~iS~s 102 (201)
T 3fxa_A 29 TSEEALVKTVEKIAECT-GKIVVAGCGTSGVA--AKKLVHSFNCI-ER-PAVFLTPSDAVHGTLGVL-QKEDILILISKG 102 (201)
T ss_dssp SCHHHHHHHHHHHHHCS-SCEEEECCTHHHHH--HHHHHHHHHHT-TC-CEEECCHHHHTTTGGGGC-CTTCEEEEECSS
T ss_pred cCHHHHHHHHHHHHhcC-CcEEEEEecHHHHH--HHHHHHHHHhc-CC-cEEEeCchHHHhhhhhcC-CCCCEEEEEeCC
Confidence 56778888888777651 2788888 654221 12233333333 55 344433221111111111 112225777777
Q ss_pred CCCHHHHHHhhcCCCHHHHHHHHHHHHHcCC
Q 015786 196 TLVPAKFEFLTRRKGHEKVMESINAAIEVGY 226 (400)
Q Consensus 196 g~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~ 226 (400)
|.+ ..+++.++.+++.|.
T Consensus 103 G~t-------------~~~~~~~~~ak~~g~ 120 (201)
T 3fxa_A 103 GNT-------------GELLNLIPACKTKGS 120 (201)
T ss_dssp SCC-------------HHHHTTHHHHHHHTC
T ss_pred CCC-------------HHHHHHHHHHHHcCC
Confidence 743 456778888889888
No 292
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=25.58 E-value=2.2e+02 Score=25.75 Aligned_cols=136 Identities=13% Similarity=0.132 Sum_probs=86.6
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEE--ECCCccchhhHHHHHHHhhhcCCCceEEEEecCcc-------------hhhhHHH
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRL--TGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLT-------------LARKLPK 181 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~--~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~l-------------l~~~~~~ 181 (400)
-+.+++...+...+..| +.|.| +.| -||..=..+++.+++.....-++|..|.+- +++++..
T Consensus 26 ~t~~elr~~~~~~r~~g-~~IgfVPTMG--~LH~GHlsLi~~A~~~~d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~l 102 (314)
T 3inn_A 26 HTIEELRQALAPARQQG-KKIGFVPTMG--YLHKGHLELVRRARVENDVTLVSIFVNPLQFGANEDLGRYPRDLERDAGL 102 (314)
T ss_dssp CSHHHHHHHHHHHHHTT-CCEEEEEECS--SCCHHHHHHHHHHHHHCSEEEEEECCCGGGSCTTSSTTTCCCCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcC-CeEEEEcCCC--ccCHHHHHHHHHHHHhCCEEEEEECCChhhcCCCccccccCCCHHHHHHH
Confidence 46889999998887776 46777 655 388887888998887644435667777643 3456777
Q ss_pred HHHcCCCeEEEecCCCCHHHH--------------HHh---hcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHH
Q 015786 182 LKESGLTSVNISLDTLVPAKF--------------EFL---TRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEI 244 (400)
Q Consensus 182 l~~~g~~~i~iSldg~~~~~~--------------~~i---r~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el 244 (400)
|.+.|++.| +.-+- ++.| +.+ .+.+.|+-+...+.+|...=-+. ...+.. ....++
T Consensus 103 l~~~GvD~v-F~P~~--~emYP~g~~t~V~v~~l~~~LeG~~RPgHF~GV~TVV~KLfniv~Pd---~A~FGe-KD~QQl 175 (314)
T 3inn_A 103 LHDAQVDYL-FAPTV--SDMYPRPMQTVVDVPPLGNQIEGEARPGHFAGVATVVSKLFNIVGPD---AAYFGE-KDFQQL 175 (314)
T ss_dssp HHHTTCSEE-ECCCH--HHHCSSCCCCEEECHHHHSSTHHHHSTTHHHHHHHHHHHHHHHHCCS---EEEEET-TSHHHH
T ss_pred HHhCCCCEE-ECCCH--HHcCCCCCeeEEEcCCcccccCCCCCcchhhhHHHHHHHHHhccCCC---EEEECc-cHHHHH
Confidence 888898754 32211 1111 111 12334888888888887752212 123333 466788
Q ss_pred HHHHHHHHhCCCeEEEEe
Q 015786 245 CDFVELTRDRPINIRFIE 262 (400)
Q Consensus 245 ~~l~~~~~~~gv~~~~~~ 262 (400)
.-+-++.+++++++..+.
T Consensus 176 ~vIrrmV~DL~~pVeIv~ 193 (314)
T 3inn_A 176 VIIRRMVDDMAIPVRIVG 193 (314)
T ss_dssp HHHHHHHHHTTCCCEEEE
T ss_pred HHHHHHHHHcCCceEEEe
Confidence 888888888888766554
No 293
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=25.48 E-value=2.4e+02 Score=26.04 Aligned_cols=96 Identities=11% Similarity=0.027 Sum_probs=59.6
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchh-hhHHHHHHcC-----CCeE
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLA-RKLPKLKESG-----LTSV 190 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~-~~~~~l~~~g-----~~~i 190 (400)
++.++..++++.+.+.++..|- ||+-..++ +..+.+++..++ -|.++..+.+ +.+..+++.+ ++.|
T Consensus 221 ~~~~~a~~~~~~l~~~~i~~iE----qP~~~~d~-~~~~~l~~~~~i---PIa~dE~~~~~~~~~~~i~~~~~~~~~d~v 292 (392)
T 1tzz_A 221 FNLETGIAYAKMLRDYPLFWYE----EVGDPLDY-ALQAALAEFYPG---PMATGENLFSHQDARNLLRYGGMRPDRDWL 292 (392)
T ss_dssp CCHHHHHHHHHHHTTSCCSEEE----CCSCTTCH-HHHHHHTTTCCS---CEEECTTCCSHHHHHHHHHHSCCCTTTCEE
T ss_pred CCHHHHHHHHHHHHHcCCCeec----CCCChhhH-HHHHHHHhhCCC---CEEECCCCCCHHHHHHHHHcCCCccCCcEE
Confidence 5677777777777777766554 77653333 334444443233 4566665543 4556666654 5555
Q ss_pred EEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCc---EEEE
Q 015786 191 NISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNP---VKVN 232 (400)
Q Consensus 191 ~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~---v~i~ 232 (400)
++-+ ...+++...++.+..+.+.|+ . +.+.
T Consensus 293 ~ik~-----------~~~GGit~~~~i~~~A~~~gi-~~~~~~~~ 325 (392)
T 1tzz_A 293 QFDC-----------ALSYGLCEYQRTLEVLKTHGW-SPSRCIPH 325 (392)
T ss_dssp CCCT-----------TTTTCHHHHHHHHHHHHHTTC-CGGGBCCS
T ss_pred EECc-----------cccCCHHHHHHHHHHHHHCCC-CCceEeec
Confidence 5433 223568999999999999999 6 5454
No 294
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=25.42 E-value=3.7e+02 Score=24.93 Aligned_cols=42 Identities=17% Similarity=0.116 Sum_probs=26.3
Q ss_pred HHHHHHhC-CCCEEEEE-----CCCccchhhHHHHHHHhhhcCCCceEEE
Q 015786 125 LAYLFVTS-GVDKIRLT-----GGEPTVRKDIEEACFHLSKLKGLKTLAM 168 (400)
Q Consensus 125 ii~~~~~~-g~~~i~~~-----GGEPll~~~l~~~i~~~~~~~g~~~~~i 168 (400)
.++++++. |...|.+. .|+.....++.++-+.+.+. |+ .+..
T Consensus 35 ~L~~i~q~~G~~gIe~~l~~~~~g~~w~~~~i~~lk~~l~~~-GL-~i~~ 82 (386)
T 3bdk_A 35 TLEEIKAIPGMQGIVTAVYDVPVGQAWPLENILELKKMVEEA-GL-EITV 82 (386)
T ss_dssp CHHHHHTSTTCCEEEECCCSSCSSSCCCHHHHHHHHHHHHTT-TC-EEEE
T ss_pred HHHHHHhcCCCCEEEeCCcccCCCCCCCHHHHHHHHHHHHHc-CC-EEEE
Confidence 35556678 88888775 24444445567777777764 88 4443
No 295
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=25.40 E-value=2e+02 Score=26.68 Aligned_cols=20 Identities=20% Similarity=0.263 Sum_probs=11.7
Q ss_pred hhHHHHHHHhhhcCCCceEEE
Q 015786 148 KDIEEACFHLSKLKGLKTLAM 168 (400)
Q Consensus 148 ~~l~~~i~~~~~~~g~~~~~i 168 (400)
.+..++++.+.+. |+..+.+
T Consensus 266 ~~~~~la~~l~~~-Gvd~i~v 285 (379)
T 3aty_A 266 ALTKHLCKKIEPL-SLAYLHY 285 (379)
T ss_dssp HHHHHHHHHHGGG-CCSEEEE
T ss_pred HHHHHHHHHHHHh-CCCEEEE
Confidence 3456677777664 6644444
No 296
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=24.82 E-value=1.3e+02 Score=27.28 Aligned_cols=60 Identities=18% Similarity=0.134 Sum_probs=43.5
Q ss_pred EEecCcchhhhHHHHHHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEE
Q 015786 168 MTTNGLTLARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVV 235 (400)
Q Consensus 168 i~TNG~ll~~~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v 235 (400)
.+.||.- .+.+..|++.|++.|.|.+-. +|. .+....+.+++.++.++++|+ +|.+.+-.
T Consensus 23 ~~~~G~~-~d~~~ilk~~G~N~VRi~~w~-~P~-----~g~~~~~~~~~~~~~A~~~Gl-kV~ld~Hy 82 (332)
T 1hjs_A 23 KNTNGNA-QPLENILAANGVNTVRQRVWV-NPA-----DGNYNLDYNIAIAKRAKAAGL-GVYIDFHY 82 (332)
T ss_dssp BCTTSCB-CCHHHHHHHTTCCEEEEEECS-SCT-----TCTTSHHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred ECCCCCc-ccHHHHHHHCCCCEEEEeeee-CCC-----CCcCCHHHHHHHHHHHHHCCC-EEEEEecc
Confidence 3346753 345677788999999998753 343 233458999999999999999 88777543
No 297
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=24.80 E-value=2.8e+02 Score=23.16 Aligned_cols=61 Identities=13% Similarity=0.147 Sum_probs=37.4
Q ss_pred HHHHHHHhCCCCEEEEECC--CccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCeE
Q 015786 124 RLAYLFVTSGVDKIRLTGG--EPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSV 190 (400)
Q Consensus 124 ~ii~~~~~~g~~~i~~~GG--EPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i 190 (400)
+.++.+.+.|...|.+++. ++ +...++++.+++. |+ .+.+..+.....+.+..+. .+.+.|
T Consensus 82 ~~v~~~~~~Gad~v~vh~~~~~~---~~~~~~~~~~~~~-g~-~ig~~~~p~t~~e~~~~~~-~~~d~v 144 (230)
T 1rpx_A 82 QRVPDFIKAGADIVSVHCEQSST---IHLHRTINQIKSL-GA-KAGVVLNPGTPLTAIEYVL-DAVDLV 144 (230)
T ss_dssp HHHHHHHHTTCSEEEEECSTTTC---SCHHHHHHHHHHT-TS-EEEEEECTTCCGGGGTTTT-TTCSEE
T ss_pred HHHHHHHHcCCCEEEEEecCccc---hhHHHHHHHHHHc-CC-cEEEEeCCCCCHHHHHHHH-hhCCEE
Confidence 4556666789999988887 54 3456777777764 66 5677666333334343333 346655
No 298
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=24.53 E-value=3.7e+02 Score=23.83 Aligned_cols=110 Identities=14% Similarity=0.058 Sum_probs=58.3
Q ss_pred CCCHHHHHHHHHHHHhC-CCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecC----c----ch--hh-------
Q 015786 116 LLSLNEILRLAYLFVTS-GVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNG----L----TL--AR------- 177 (400)
Q Consensus 116 ~~s~e~i~~ii~~~~~~-g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG----~----ll--~~------- 177 (400)
..++++. ++.+++. |...|.+....+. ..++.++-+.+++. |+.-..+.++. . +. ++
T Consensus 32 ~~~~~e~---l~~aa~~~G~~~VEl~~~~~~-~~~~~~l~~~l~~~-Gl~i~~~~~~~~~~~~~~g~l~~~d~~~r~~~i 106 (333)
T 3ktc_A 32 ALSTIDQ---INAAKEVGELSYVDLPYPFTP-GVTLSEVKDALKDA-GLKAIGITPEIYLQKWSRGAFTNPDPAARAAAF 106 (333)
T ss_dssp CCCHHHH---HHHHHHHSSEEEEEEEESCST-TCCHHHHHHHHHHH-TCEEEEEEECTTSGGGTTCSTTCSSHHHHHHHH
T ss_pred CCCHHHH---HHHHHHhCCCCEEEecCCCcc-hhHHHHHHHHHHHc-CCeEEEEecCcCcccccCCCCCCcCHHHHHHHH
Confidence 3566655 4444566 8888888754333 34467777777775 88433455542 1 11 11
Q ss_pred -----hHHHHHHcCCCeEEEecC--CCC-HHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEE
Q 015786 178 -----KLPKLKESGLTSVNISLD--TLV-PAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCV 234 (400)
Q Consensus 178 -----~~~~l~~~g~~~i~iSld--g~~-~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~ 234 (400)
.++...+.|...|.+..- |.+ +.. ......++++.++++.+.+..- .+.+.+-
T Consensus 107 ~~~~~~i~~A~~LGa~~vv~~~g~~g~~~~~~---~~~~~~~~~~~~~l~~l~~~a~-~~~i~lE 167 (333)
T 3ktc_A 107 ELMHESAGIVRELGANYVKVWPGQDGWDYPFQ---VSHKNLWKLAVDGMRDLAGANP-DVKFAIE 167 (333)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCTTCEESSTTS---SCHHHHHHHHHHHHHHHHHTCT-TSEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCCCCCcCCCCc---CCHHHHHHHHHHHHHHHHHHhh-cCCEEEE
Confidence 122334567777766432 110 000 0001127888889998888744 4444443
No 299
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=24.50 E-value=2.4e+02 Score=23.95 Aligned_cols=113 Identities=14% Similarity=0.105 Sum_probs=61.0
Q ss_pred HHHHHHhCCCCEEEEECCC-ccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCeEE-EecCCCCHHHH
Q 015786 125 LAYLFVTSGVDKIRLTGGE-PTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVN-ISLDTLVPAKF 202 (400)
Q Consensus 125 ii~~~~~~g~~~i~~~GGE-Pll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~-iSldg~~~~~~ 202 (400)
.++.+.+.|...|.++... |. ....+.++.+++. |. .+.+..|.....+.+..+.+ +.+.|. .|+......
T Consensus 77 ~i~~~~~aGadgv~vh~e~~~~--~~~~~~~~~i~~~-g~-~~gv~~~p~t~~e~~~~~~~-~~D~v~~msv~pg~gg-- 149 (230)
T 1tqj_A 77 YVEDFAKAGADIISVHVEHNAS--PHLHRTLCQIREL-GK-KAGAVLNPSTPLDFLEYVLP-VCDLILIMSVNPGFGG-- 149 (230)
T ss_dssp THHHHHHHTCSEEEEECSTTTC--TTHHHHHHHHHHT-TC-EEEEEECTTCCGGGGTTTGG-GCSEEEEESSCC------
T ss_pred HHHHHHHcCCCEEEECcccccc--hhHHHHHHHHHHc-CC-cEEEEEeCCCcHHHHHHHHh-cCCEEEEEEeccccCC--
Confidence 4566667788888888541 43 3456788888874 77 68888886554455555544 466554 355542111
Q ss_pred HHhhcCCCHHHHHHHHHHHH-HcCCCcEEEEEEEecCCChhHHHHHHH
Q 015786 203 EFLTRRKGHEKVMESINAAI-EVGYNPVKVNCVVMRGFNDDEICDFVE 249 (400)
Q Consensus 203 ~~ir~~~~~~~v~~~i~~l~-~~g~~~v~i~~~v~~~~n~~el~~l~~ 249 (400)
... .....+++- .++.+. +.|. .+ -+.+.-|.|.+.+.++.+
T Consensus 150 q~~-~~~~~~~i~-~lr~~~~~~~~-~~--~I~v~GGI~~~~~~~~~~ 192 (230)
T 1tqj_A 150 QSF-IPEVLPKIR-ALRQMCDERGL-DP--WIEVDGGLKPNNTWQVLE 192 (230)
T ss_dssp CCC-CGGGHHHHH-HHHHHHHHHTC-CC--EEEEESSCCTTTTHHHHH
T ss_pred ccC-cHHHHHHHH-HHHHHHHhcCC-CC--cEEEECCcCHHHHHHHHH
Confidence 000 001133332 233332 3343 22 334555778777777755
No 300
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=24.46 E-value=1.8e+02 Score=20.26 Aligned_cols=43 Identities=19% Similarity=0.243 Sum_probs=21.8
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCC
Q 015786 118 SLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGL 163 (400)
Q Consensus 118 s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~ 163 (400)
+-.+|..+++.+++.|-.-|.|..|.. ..+..++-..+++. |+
T Consensus 36 ssqdirdiiksmkdngkplvvfvngas--qndvnefqneakke-gv 78 (112)
T 2lnd_A 36 SSQDIRDIIKSMKDNGKPLVVFVNGAS--QNDVNEFQNEAKKE-GV 78 (112)
T ss_dssp SHHHHHHHHHHHTTCCSCEEEEECSCC--HHHHHHHHHHHHHH-TC
T ss_pred chhhHHHHHHHHHhcCCeEEEEecCcc--cccHHHHHHHHHhc-Cc
Confidence 445555666666555555555554432 23344555555543 44
No 301
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=24.44 E-value=1.9e+02 Score=24.65 Aligned_cols=69 Identities=17% Similarity=0.083 Sum_probs=43.3
Q ss_pred HHHHHHHHHhCCCCEEEEECCC--ccchhhHHHHHHHhhhcCCCceEEEEecCcch-hhhHHHHHHcCCCeEEEe
Q 015786 122 ILRLAYLFVTSGVDKIRLTGGE--PTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESGLTSVNIS 193 (400)
Q Consensus 122 i~~ii~~~~~~g~~~i~~~GGE--Pll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll-~~~~~~l~~~g~~~i~iS 193 (400)
...+++.+.+.|+..|.++..+ ........++++.+++..++ . +..+|-.- .+.+..+++.|.+.|.+.
T Consensus 37 ~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~~~i-p--vi~~Ggi~~~~~~~~~l~~Gad~V~ig 108 (247)
T 3tdn_A 37 LRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTL-P--IIASGGAGKMEHFLEAFLRGADKVSIN 108 (247)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGGCCS-C--EEEESCCCSHHHHHHHHHTTCSEECCS
T ss_pred HHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHhCCC-C--EEEeCCCCCHHHHHHHHHcCCCeeehh
Confidence 3446666678899999987532 11222234667777765455 3 33454443 477888888898888765
No 302
>1pzr_A Erythronolide synthase; four helix bundle, homodimer, transferase; NMR {Saccharopolyspora erythraea} SCOP: a.38.2.1
Probab=24.32 E-value=21 Score=23.82 Aligned_cols=9 Identities=33% Similarity=0.586 Sum_probs=7.0
Q ss_pred EECCCccch
Q 015786 139 LTGGEPTVR 147 (400)
Q Consensus 139 ~~GGEPll~ 147 (400)
|.|||||+.
T Consensus 14 ~~~~~~~~~ 22 (60)
T 1pzr_A 14 FGGGEDLLM 22 (60)
T ss_dssp HHCCCSSCC
T ss_pred hcCCchHHh
Confidence 468999985
No 303
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=24.22 E-value=3.5e+02 Score=25.07 Aligned_cols=96 Identities=17% Similarity=0.174 Sum_probs=62.3
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchh-hhHHHHHHcCCCeEEEecC
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLA-RKLPKLKESGLTSVNISLD 195 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~-~~~~~l~~~g~~~i~iSld 195 (400)
++.++..++++.+.+.++.-|- ||+-..++. ..+.+++..++ -|.+...+.+ ..+..+++.+++.|++.+.
T Consensus 202 ~~~~~A~~~~~~L~~~~i~~iE----qP~~~~d~~-~~~~l~~~~~i---PIa~dE~~~~~~~~~~~i~~~~d~v~~k~~ 273 (393)
T 4dwd_A 202 YSVGGAIRVGRALEDLGYSWFE----EPVQHYHVG-AMGEVAQRLDI---TVSAGEQTYTLQALKDLILSGVRMVQPDIV 273 (393)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEE----CCSCTTCHH-HHHHHHHHCSS---EEEBCTTCCSHHHHHHHHHHTCCEECCCTT
T ss_pred CCHHHHHHHHHHHHhhCCCEEE----CCCCcccHH-HHHHHHhhCCC---CEEecCCcCCHHHHHHHHHcCCCEEEeCcc
Confidence 5788888888888888876665 787544443 34445543343 4666665553 4566666655666655443
Q ss_pred CCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEE
Q 015786 196 TLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVN 232 (400)
Q Consensus 196 g~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~ 232 (400)
- .+++...++....+.+.|+ ++.+.
T Consensus 274 ~-----------~GGit~~~~ia~~A~~~gi-~~~~h 298 (393)
T 4dwd_A 274 K-----------MGGITGMMQCAALAHAHGV-EFVPH 298 (393)
T ss_dssp T-----------TTHHHHHHHHHHHHHHHTC-EECCC
T ss_pred c-----------cCCHHHHHHHHHHHHHcCC-EEeec
Confidence 2 2558888888999999998 55443
No 304
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A*
Probab=24.07 E-value=3.8e+02 Score=23.82 Aligned_cols=141 Identities=12% Similarity=0.157 Sum_probs=72.4
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEE---ECCCccchhhHHHHHHHhhhcC--CCceEEEEecCcc-------hhhhH-HHHH
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRL---TGGEPTVRKDIEEACFHLSKLK--GLKTLAMTTNGLT-------LARKL-PKLK 183 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~---~GGEPll~~~l~~~i~~~~~~~--g~~~~~i~TNG~l-------l~~~~-~~l~ 183 (400)
++.++..++++.+.+.|+..|.- +|.|.. +-+.++...+.. .-..+.|+|-... +.+.+ ..|.
T Consensus 26 ~~~~~~~~~v~~Al~~G~~~iDTA~~Yg~E~~----vG~al~~~~~~g~~~R~~~~i~TK~~~~~~~~~~v~~~~~~SL~ 101 (322)
T 1mi3_A 26 LANATAGEQVYQAIKAGYRLFDGAEDYGNEKE----VGDGVKRAIDEGLVKREEIFLTSKLWNNYHDPKNVETALNKTLA 101 (322)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECCGGGSCHHH----HHHHHHHHHHTTSCCGGGCEEEEEECGGGCSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEccccccCHHH----HHHHHHHHhhcCCCChhhEEEEEeeCCCCCCHHHHHHHHHHHHH
Confidence 46788999999999999877763 454433 334444321110 0114677775421 11223 4455
Q ss_pred HcCCCeEEEec-CCCCHH-------HH--HHh---hc-----CCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHH
Q 015786 184 ESGLTSVNISL-DTLVPA-------KF--EFL---TR-----RKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEIC 245 (400)
Q Consensus 184 ~~g~~~i~iSl-dg~~~~-------~~--~~i---r~-----~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~ 245 (400)
..|.++|-+=+ +.+... .+ +.. .+ ...++.++++++.|++.|. |+.+=..+++.+++.
T Consensus 102 rL~~dyiDl~llH~p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gk----ir~iGvSn~~~~~l~ 177 (322)
T 1mi3_A 102 DLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLVAAGK----IKSIGVSNFPGALLL 177 (322)
T ss_dssp HHTCSCEEEEEECCSCCBCCCCTTTCSSCTTCCSSTTCCCBCCCCHHHHHHHHHHHHHTTS----EEEEEEESCCHHHHH
T ss_pred HhCCCCeeeEEEecCcccccCcccccccccccccccccccccCCCHHHHHHHHHHHHHcCC----cCEEEEcCCCHHHHH
Confidence 66777665443 222100 00 000 00 1147889999999999987 222222235666666
Q ss_pred HHHHHHHhCCCeEEEEeeecC
Q 015786 246 DFVELTRDRPINIRFIEFMPF 266 (400)
Q Consensus 246 ~l~~~~~~~gv~~~~~~~~p~ 266 (400)
++++.+. ....+..+++.|+
T Consensus 178 ~~~~~~~-~~~~~~Q~~~~~~ 197 (322)
T 1mi3_A 178 DLLRGAT-IKPAVLQVEHHPY 197 (322)
T ss_dssp HHHHHCS-SCCCEEEEECBTT
T ss_pred HHHHhCC-CCceEeecccCcC
Confidence 6665432 1223444444443
No 305
>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367}
Probab=24.05 E-value=1.5e+02 Score=26.47 Aligned_cols=62 Identities=18% Similarity=0.208 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHhCCCCEEEEE-CCCccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCC
Q 015786 120 NEILRLAYLFVTSGVDKIRLT-GGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGL 187 (400)
Q Consensus 120 e~i~~ii~~~~~~g~~~i~~~-GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~ 187 (400)
+.+..+++.+ ..|-..+.++ +|.|+++--..++++.+.+. |+ .+.+.-.-+ -....+...|+
T Consensus 76 ~~~~~li~~l-~~G~~Va~lsdaGdP~i~~~g~~lv~~~~~~-gi-~v~viPGiS---A~~aA~a~~Gl 138 (296)
T 3kwp_A 76 ERIPQLIAKL-KQGMQIAQVSDAGMPSISDPGHELVNACIDA-HI-PVVPLPGAN---AGLTALIASGL 138 (296)
T ss_dssp HHHHHHHHHH-HTTCEEEEECSSBCTTSSHHHHHHHHHHHHT-TC-CEEECCCCC---HHHHHHHHHSS
T ss_pred hHhHHHHHHH-hcCceEEEeccCCCCCCCCCchHHHHHHHHc-CC-CeeeCCCcc---cchHHHHhccC
Confidence 3344445444 4554556666 89999987677889988875 88 566644332 22344445554
No 306
>1wyz_A Putative S-adenosylmethionine-dependent methyltra; northeast structural genomics consortium, BTR28, methyltrans PSI; 2.50A {Bacteroides thetaiotaomicron} SCOP: c.90.1.1
Probab=24.04 E-value=1.2e+02 Score=26.14 Aligned_cols=49 Identities=12% Similarity=0.083 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHhCCCCEEEEE-CCCccchhhHHHHHHHhhhcCCCceEEEEe
Q 015786 119 LNEILRLAYLFVTSGVDKIRLT-GGEPTVRKDIEEACFHLSKLKGLKTLAMTT 170 (400)
Q Consensus 119 ~e~i~~ii~~~~~~g~~~i~~~-GGEPll~~~l~~~i~~~~~~~g~~~~~i~T 170 (400)
.+.+..+++.+. .|-..+.++ +|.|++.--..++++.+++. |+ .+.+.-
T Consensus 70 ~~~~~~i~~~~~-~G~~Va~ls~~GdP~i~~~g~~l~~~l~~~-gi-~vevIP 119 (242)
T 1wyz_A 70 PEDISGYLKPLA-GGASMGVISEAGCPAVADPGADVVAIAQRQ-KL-KVIPLV 119 (242)
T ss_dssp HHHHHHHHHHHH-TTCCEEEECC-------CHHHHHHHHHHHT-TC-CEEECC
T ss_pred HHHHHHHHHHHH-cCCEEEEEecCCCCcccCcHHHHHHHHHHC-CC-CEEEeC
Confidence 445555566554 465566665 89999975566788888774 77 677654
No 307
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=23.76 E-value=3.7e+02 Score=23.55 Aligned_cols=112 Identities=12% Similarity=0.076 Sum_probs=58.3
Q ss_pred HHHHHHHHHHhCCCCEEEEECCCcc----ch--h------hHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCC
Q 015786 121 EILRLAYLFVTSGVDKIRLTGGEPT----VR--K------DIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLT 188 (400)
Q Consensus 121 ~i~~ii~~~~~~g~~~i~~~GGEPl----l~--~------~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~ 188 (400)
.+...++.+++.|...|.|.+..|- .. + +..++.+.+++. |+ .+....-+..
T Consensus 37 ~l~~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~-GL-~i~~~~~~~~-------------- 100 (305)
T 3obe_A 37 DMPNGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDA-GL-RISSSHLTPS-------------- 100 (305)
T ss_dssp THHHHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHT-TC-EEEEEBCCCS--------------
T ss_pred CHHHHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHC-CC-eEEEeecccc--------------
Confidence 4566777777889999988864220 00 1 345555666553 76 3322111110
Q ss_pred eEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEec-CCCh-------hHHHHHHHHHHhCCCeEEE
Q 015786 189 SVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMR-GFND-------DEICDFVELTRDRPINIRF 260 (400)
Q Consensus 189 ~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~-~~n~-------~el~~l~~~~~~~gv~~~~ 260 (400)
+..++++..+.. .+.+.+.|+.+.+.|. +..+ +.-.+ .... +.+.++.+.+++.|+.+-+
T Consensus 101 -----~~~~~~~~~~~~-----~~~~~~~i~~A~~lG~-~~v~-~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 168 (305)
T 3obe_A 101 -----LREYTKENMPKF-----DEFWKKATDIHAELGV-SCMV-QPSLPRIENEDDAKVVSEIFNRAGEITKKAGILWGY 168 (305)
T ss_dssp -----CCCCCGGGHHHH-----HHHHHHHHHHHHHHTC-SEEE-ECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred -----ccccchhhHHHH-----HHHHHHHHHHHHHcCC-CEEE-eCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 011122222221 4667778888888898 4322 11111 1122 2356677777888887544
No 308
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=23.56 E-value=4e+02 Score=23.92 Aligned_cols=128 Identities=19% Similarity=0.186 Sum_probs=71.4
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEE---ECCCccchhh-HHHHHHHhhhcCCCceEEEEecCc-------c--------hhh
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRL---TGGEPTVRKD-IEEACFHLSKLKGLKTLAMTTNGL-------T--------LAR 177 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~---~GGEPll~~~-l~~~i~~~~~~~g~~~~~i~TNG~-------l--------l~~ 177 (400)
.+.++..++++.+.+.|+..|.- +|.++-.... +-+.++.... ..-..+.|+|-.. . +.+
T Consensus 40 ~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~-~~R~~~~I~TK~g~~~~~~~~~~~~s~~~i~~ 118 (346)
T 3n6q_A 40 NALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFA-AYRDELIISTKAGYDMWPGPYGSGGSRKYLLA 118 (346)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHCT-TTGGGCEEEEEECSCCSSSTTSSSSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEECccccCCCCCcHHHHHHHHHHhhcc-cccccEEEEEEecccCCCCCCCCCCCHHHHHH
Confidence 57889999999999999877663 4531111111 3344443110 0011456666521 0 112
Q ss_pred hH-HHHHHcCCCeEEEec-CCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCC
Q 015786 178 KL-PKLKESGLTSVNISL-DTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRP 255 (400)
Q Consensus 178 ~~-~~l~~~g~~~i~iSl-dg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~g 255 (400)
.+ ..|...|.++|-+=+ +.+++. ..++.++++++.|++.|. |+.+=..+++.+++.++.+.+...+
T Consensus 119 ~~e~SL~rL~~dyiDl~~lH~p~~~--------~~~~e~~~al~~l~~~Gk----ir~iGvSn~~~~~l~~~~~~~~~~~ 186 (346)
T 3n6q_A 119 SLDQSLKRMGLEYVDIFYSHRVDEN--------TPMEETASALAHAVQSGK----ALYVGISSYSPERTQKMVELLREWK 186 (346)
T ss_dssp HHHHHHHHHTCSCEEEEEECSCCTT--------SCHHHHHHHHHHHHHTTS----EEEEEEESCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHhCCCcEeEEEEeCCCCC--------CCHHHHHHHHHHHHHcCC----eeEEEeCCCCHHHHHHHHHHHHHcC
Confidence 23 345566777666543 222221 237888899999999886 3333222467777888777776655
Q ss_pred Ce
Q 015786 256 IN 257 (400)
Q Consensus 256 v~ 257 (400)
+.
T Consensus 187 ~~ 188 (346)
T 3n6q_A 187 IP 188 (346)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 309
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=23.38 E-value=1.8e+02 Score=26.95 Aligned_cols=19 Identities=21% Similarity=0.041 Sum_probs=11.4
Q ss_pred hHHHHHHHhhhcCCCceEEE
Q 015786 149 DIEEACFHLSKLKGLKTLAM 168 (400)
Q Consensus 149 ~l~~~i~~~~~~~g~~~~~i 168 (400)
+..++++.+.+. |+..+.+
T Consensus 256 ~~~~la~~le~~-Gvd~i~v 274 (377)
T 2r14_A 256 MAFYLAGELDRR-GLAYLHF 274 (377)
T ss_dssp HHHHHHHHHHHT-TCSEEEE
T ss_pred HHHHHHHHHHHc-CCCEEEE
Confidence 456677777664 6644554
No 310
>2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens}
Probab=23.35 E-value=2.2e+02 Score=29.20 Aligned_cols=83 Identities=11% Similarity=0.083 Sum_probs=54.9
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC-CC-------ccch-----hhHHHHHHHhhhcCCCceEE--EEe----cCc-
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG-GE-------PTVR-----KDIEEACFHLSKLKGLKTLA--MTT----NGL- 173 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G-GE-------Pll~-----~~l~~~i~~~~~~~g~~~~~--i~T----NG~- 173 (400)
+..++.+.++++|+.+...+...+.++= -+ +-.+ .++.++++++++. |+ .|. |.. .+.
T Consensus 160 r~~~~~~~~~~~id~ma~~K~N~~h~hl~Dd~~~~~~wr~~y~~~~~~~~~elv~ya~~r-gI-~vv~~i~P~~~~~~~~ 237 (737)
T 2v5d_A 160 GTPWTHQDRLDQIKFYGENKLNTYIYAPKDDPYHREKWREPYPESEMQRMQELINASAEN-KV-DFVFGISPGIDIRFDG 237 (737)
T ss_dssp SSCCCHHHHHHHHHHHHHTTCCEEECCCSCCSTTTTTC-----CTTHHHHHHHHHHHHHT-TC-EEEECCCCGGGCCCSS
T ss_pred CCCCCHHHHHHHHHHHHHhCCeEEEEecccccchhhccCcCCCHHHHHHHHHHHHHHHHC-CC-EEEEecCCCccccCCC
Confidence 4568999999999999988877777652 11 1111 2689999999985 88 443 112 111
Q ss_pred --------chhhhHHHHHHcCCCeEEEecCCCC
Q 015786 174 --------TLARKLPKLKESGLTSVNISLDTLV 198 (400)
Q Consensus 174 --------ll~~~~~~l~~~g~~~i~iSldg~~ 198 (400)
.+..++..+.+.|...+.|..|-..
T Consensus 238 ~~~~~~~~~l~~~~~~~~~~g~~~f~ig~DEi~ 270 (737)
T 2v5d_A 238 DAGEEDFNHLITKAESLYDMGVRSFAIYWDDIQ 270 (737)
T ss_dssp BTTHHHHHHHHHHHHHHHHHTCCEEEEECSSCC
T ss_pred cccHHHHHHHHHHHHHHHhcCCcEEEEcCccCC
Confidence 1234556666788889999888764
No 311
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=23.33 E-value=4.4e+02 Score=24.25 Aligned_cols=138 Identities=15% Similarity=0.111 Sum_probs=75.7
Q ss_pred CCHHHHHHHHHHHHhC-CCCEEEEECCCccchhhHHHHHHHhhhc--CCCceEEEEecCcchhhh----HHHHHHcCCCe
Q 015786 117 LSLNEILRLAYLFVTS-GVDKIRLTGGEPTVRKDIEEACFHLSKL--KGLKTLAMTTNGLTLARK----LPKLKESGLTS 189 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~-g~~~i~~~GGEPll~~~l~~~i~~~~~~--~g~~~~~i~TNG~ll~~~----~~~l~~~g~~~ 189 (400)
.+.+++.+.+..+.+. |.+.+.+--|.+-+..+ .+.++.+++. .++ .+.+.-|+..-.+. ++.|.+.++.+
T Consensus 166 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~d-~~~v~avR~a~G~~~-~l~vDaN~~~~~~~A~~~~~~l~~~~i~~ 243 (383)
T 3toy_A 166 LDARDDERTLRTACDEHGFRAIKSKGGHGDLATD-EAMIKGLRALLGPDI-ALMLDFNQSLDPAEATRRIARLADYDLTW 243 (383)
T ss_dssp CCHHHHHHHHHHHHHTSCCCEEEEECCSSCHHHH-HHHHHHHHHHHCTTS-EEEEECTTCSCHHHHHHHHHHHGGGCCSE
T ss_pred CCHHHHHHHHHHHHHccCCcEEEEecCCCCHHHH-HHHHHHHHHHhCCCC-eEEEeCCCCCCHHHHHHHHHHHHhhCCCE
Confidence 5788888888888777 99988887665433333 3445555543 345 78899998665332 35555677877
Q ss_pred EEEecCCCCHHHHHHhhcCC--------CHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCCCeE
Q 015786 190 VNISLDTLVPAKFEFLTRRK--------GHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINI 258 (400)
Q Consensus 190 i~iSldg~~~~~~~~ir~~~--------~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~~ 258 (400)
|-=.+...+.+.+..++..- +.. -...++.+.+.|.-.+ ++.-+.+---..+..++.++++..|+.+
T Consensus 244 iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~-~~~~~~~~i~~~a~d~-v~ik~~~~GGit~~~~ia~~A~~~gi~~ 318 (383)
T 3toy_A 244 IEEPVPQENLSGHAAVRERSEIPIQAGENWW-FPRGFAEAIAAGASDF-IMPDLMKVGGITGWLNVAGQADAASIPM 318 (383)
T ss_dssp EECCSCTTCHHHHHHHHHHCSSCEEECTTCC-HHHHHHHHHHHTCCSE-ECCCTTTTTHHHHHHHHHHHHHHHTCCB
T ss_pred EECCCCcchHHHHHHHHhhcCCCEEeCCCcC-CHHHHHHHHHcCCCCE-EEeCccccCCHHHHHHHHHHHHHcCCEE
Confidence 76444433344555554311 111 1223333444442011 2221221002356677777777777653
No 312
>2npn_A Putative cobalamin synthesis related protein; COBF, PSI-2, MAD, struc genomics, SAM, S-adenosylmethionine, MCSG; HET: MSE SAM; 1.60A {Corynebacterium diphtheriae}
Probab=23.30 E-value=77 Score=27.43 Aligned_cols=40 Identities=13% Similarity=0.143 Sum_probs=28.2
Q ss_pred hCCCCEEEEECCCccchhhHHHHHHHhhhcC--CCceEEEEec
Q 015786 131 TSGVDKIRLTGGEPTVRKDIEEACFHLSKLK--GLKTLAMTTN 171 (400)
Q Consensus 131 ~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~--g~~~~~i~TN 171 (400)
+.|-..+.+++|+|+++--..++++.+.+.. ++ .+.+.-.
T Consensus 100 ~~g~~Vv~l~~GDP~iy~~~~~l~~~l~~~g~~~i-~veviPG 141 (251)
T 2npn_A 100 PDDGAVAFLVWGDPSLYDSTLRIIEHMRNLEDLHA-DVKVIPG 141 (251)
T ss_dssp CTTCEEEEEESBCTTSSCCHHHHHHHHHHHHTCCE-EEEEECC
T ss_pred HCCCeEEEEeCCCcccccCHHHHHHHHHhcCCCCC-cEEEeCC
Confidence 3455667788999999877777888887741 25 5666543
No 313
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=23.23 E-value=4.4e+02 Score=24.23 Aligned_cols=65 Identities=18% Similarity=0.219 Sum_probs=41.0
Q ss_pred HHHHHHhCCCCEEEEE--CCCccchhhHHHHHHHhhhcC-CCceEEEEecCcchhhhHHHHHHcCCCeEEEecC
Q 015786 125 LAYLFVTSGVDKIRLT--GGEPTVRKDIEEACFHLSKLK-GLKTLAMTTNGLTLARKLPKLKESGLTSVNISLD 195 (400)
Q Consensus 125 ii~~~~~~g~~~i~~~--GGEPll~~~l~~~i~~~~~~~-g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~iSld 195 (400)
.++.+.+.|+..|.+. .|.| +.+.+.++.+++.. ++ .+.. -|.. ..+.+..+.+.|.+.|.+++.
T Consensus 112 ~~~~lieaGvd~I~idta~G~~---~~~~~~I~~ik~~~p~v-~Vi~-G~v~-t~e~A~~a~~aGAD~I~vG~g 179 (366)
T 4fo4_A 112 RVKALVEAGVDVLLIDSSHGHS---EGVLQRIRETRAAYPHL-EIIG-GNVA-TAEGARALIEAGVSAVKVGIG 179 (366)
T ss_dssp HHHHHHHTTCSEEEEECSCTTS---HHHHHHHHHHHHHCTTC-EEEE-EEEC-SHHHHHHHHHHTCSEEEECSS
T ss_pred HHHHHHhCCCCEEEEeCCCCCC---HHHHHHHHHHHHhcCCC-ceEe-eeeC-CHHHHHHHHHcCCCEEEEecC
Confidence 3455556788888873 3644 34667777777653 44 3332 2222 236678888999999999644
No 314
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=23.09 E-value=4.3e+02 Score=24.04 Aligned_cols=78 Identities=12% Similarity=0.114 Sum_probs=55.8
Q ss_pred CCHHHHHHHHHHH-----HhCCCCEEEEE----C------CCccch----hh-HHHHHHHhhhcCCCceEEEEecCcc--
Q 015786 117 LSLNEILRLAYLF-----VTSGVDKIRLT----G------GEPTVR----KD-IEEACFHLSKLKGLKTLAMTTNGLT-- 174 (400)
Q Consensus 117 ~s~e~i~~ii~~~-----~~~g~~~i~~~----G------GEPll~----~~-l~~~i~~~~~~~g~~~~~i~TNG~l-- 174 (400)
++.+.+++.++.+ ++.|...|.+= + |+-..+ |+ +..+++++++. |+ .+.|-++...
T Consensus 23 ~~e~~i~~~ad~~~~~gl~~~G~~~v~iDdgW~~~~rd~~G~~~~~~~~FP~Gl~~l~~~ih~~-Gl-k~Giw~~~~~~~ 100 (362)
T 1uas_A 23 INEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTFPSGIKALADYVHAK-GL-KLGIYSDAGSQT 100 (362)
T ss_dssp CCHHHHHHHHHHHHHTSHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHHHHHHT-TC-EEEEEEESSSBC
T ss_pred CCHHHHHHHHHHHHHcCchhcCCcEEEECCCcCCCCCCCCCCeeEChhccCccHHHHHHHHHHC-CC-EeEEEeeCCCcc
Confidence 6899999999998 66777777762 2 443333 44 99999999984 88 6777654321
Q ss_pred -----------hhhhHHHHHHcCCCeEEEecCC
Q 015786 175 -----------LARKLPKLKESGLTSVNISLDT 196 (400)
Q Consensus 175 -----------l~~~~~~l~~~g~~~i~iSldg 196 (400)
++..++.+.+.|++.|.+..-.
T Consensus 101 ~~~~~pg~~~~~~~~~~~~~~wGvdyvK~D~~~ 133 (362)
T 1uas_A 101 CSNKMPGSLDHEEQDVKTFASWGVDYLKYDNCN 133 (362)
T ss_dssp TTSSSBCCTTCHHHHHHHHHHHTCCEEEEECCC
T ss_pred ccCCCCCchhHHHHHHHHHHHcCCCEEEECccC
Confidence 1344577888999999988754
No 315
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=22.85 E-value=1.3e+02 Score=28.55 Aligned_cols=61 Identities=20% Similarity=0.257 Sum_probs=39.3
Q ss_pred hhhHHHHHHcCCCeEEEec-------CCCCHHHHHHhhc-CCCHHHHHHHHHHHHHcCCCcEEEEEEEec
Q 015786 176 ARKLPKLKESGLTSVNISL-------DTLVPAKFEFLTR-RKGHEKVMESINAAIEVGYNPVKVNCVVMR 237 (400)
Q Consensus 176 ~~~~~~l~~~g~~~i~iSl-------dg~~~~~~~~ir~-~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~ 237 (400)
.+++..|++.|++.|.++- .|.++..|..+.. -++.+...+-++.+.+.|+ .|.+-+|+..
T Consensus 53 ~~~LdyL~~LGv~~I~l~Pi~~~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi-~VilD~V~NH 121 (475)
T 2z1k_A 53 AEKLPYLLDLGVEAIYLNPVFASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGV-RVILDGVFNH 121 (475)
T ss_dssp HHTHHHHHHHTCCEEEECCCEEESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTC-EEEEEECCSB
T ss_pred HHHhHHHHHcCCCEEEECCCcCCCCCCCcCCCCcCccCcccCCHHHHHHHHHHHHHCCC-EEEEEEeccc
Confidence 5778888888888888872 1222222222221 2346777777888888888 7777777643
No 316
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=22.81 E-value=4.3e+02 Score=23.94 Aligned_cols=116 Identities=11% Similarity=0.150 Sum_probs=67.8
Q ss_pred CCHHHHHHHHHHHHh--CCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchh-hhHHHHHHcC-CCeEEE
Q 015786 117 LSLNEILRLAYLFVT--SGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLA-RKLPKLKESG-LTSVNI 192 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~--~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~-~~~~~l~~~g-~~~i~i 192 (400)
++.++..++++.+.+ .++..|- ||+-..++. ..+.+++..++ -|.++..+.+ +.+..+++.+ ++.|++
T Consensus 196 ~~~~~a~~~~~~l~~~~~~i~~iE----qP~~~~d~~-~~~~l~~~~~i---pIa~dE~~~~~~~~~~~i~~~~~d~v~i 267 (366)
T 1tkk_A 196 WRPKEAVTAIRKMEDAGLGIELVE----QPVHKDDLA-GLKKVTDATDT---PIMADESVFTPRQAFEVLQTRSADLINI 267 (366)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEE----CCSCTTCHH-HHHHHHHHCSS---CEEECTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCHHHHHHHHHHHhhcCCCceEEE----CCCCcccHH-HHHHHHhhCCC---CEEEcCCCCCHHHHHHHHHhCCCCEEEe
Confidence 567888888888877 6644442 776433443 33444443333 4556665543 4455555443 666666
Q ss_pred ecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCC
Q 015786 193 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRP 255 (400)
Q Consensus 193 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~g 255 (400)
.+ ...+++...++.++.+.+.|+ ++.+.+.+ .+.--+...+.++...+
T Consensus 268 k~-----------~~~GGit~~~~i~~~A~~~g~-~~~~~~~~---es~i~~~a~~~laaa~~ 315 (366)
T 1tkk_A 268 KL-----------MKAGGISGAEKINAMAEACGV-ECMVGSMI---ETKLGITAAAHFAASKR 315 (366)
T ss_dssp CH-----------HHHTSHHHHHHHHHHHHHHTC-CEEECCSS---CCHHHHHHHHHHHHHCT
T ss_pred eh-----------hhhcCHHHHHHHHHHHHHcCC-cEEecCcc---ccHHHHHHHHHHHHcCC
Confidence 42 223568899999999999999 76555432 23333455555555544
No 317
>2zqe_A MUTS2 protein; alpha/beta, ATP-binding, DNA-binding, nucleotide-binding, DN protein; 1.70A {Thermus thermophilus}
Probab=22.73 E-value=1.5e+02 Score=20.85 Aligned_cols=40 Identities=30% Similarity=0.366 Sum_probs=25.9
Q ss_pred CCHHHHHHHHH----HHHhCCCCEEEE-EC-CCccchhhHHHHHHH
Q 015786 117 LSLNEILRLAY----LFVTSGVDKIRL-TG-GEPTVRKDIEEACFH 156 (400)
Q Consensus 117 ~s~e~i~~ii~----~~~~~g~~~i~~-~G-GEPll~~~l~~~i~~ 156 (400)
|+.++....++ .....|...|.+ +| |...|...+.+.++.
T Consensus 12 ~~~~eA~~~l~~fl~~a~~~g~~~v~IIHGkG~GvLr~~V~~~L~~ 57 (83)
T 2zqe_A 12 LTVAEALLEVDQALEEARALGLSTLRLLHGKGTGALRQAIREALRR 57 (83)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCSEEEEECCSTTSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhc
Confidence 56666665554 444478777665 68 888777766666654
No 318
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=22.45 E-value=4.6e+02 Score=24.19 Aligned_cols=140 Identities=11% Similarity=0.046 Sum_probs=78.3
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEEC------CCccc---------------hhh-HHHHHHHhhhcC--CCceEEEEe
Q 015786 115 QLLSLNEILRLAYLFVTSGVDKIRLTG------GEPTV---------------RKD-IEEACFHLSKLK--GLKTLAMTT 170 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g~~~i~~~G------GEPll---------------~~~-l~~~i~~~~~~~--g~~~~~i~T 170 (400)
..++.+++.+.+..+.+.|...|.+.+ |.+++ ..+ ..+.++.+++.- .+ .+.+..
T Consensus 147 ~~~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~d~-~l~vDa 225 (410)
T 2gl5_A 147 ILVTPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGDDA-DIIVEI 225 (410)
T ss_dssp CCCSHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHCSSS-EEEEEC
T ss_pred ccCCHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcCCCC-EEEEEC
Confidence 346889988888888888988888864 54321 122 356677766532 45 688899
Q ss_pred cCcch-hh---hHHHHHHcCCCeEEEecCCCCHHHHHHhhcC--------CCHHHHHHHHHHHHHcCCCcEEEEEEEec-
Q 015786 171 NGLTL-AR---KLPKLKESGLTSVNISLDTLVPAKFEFLTRR--------KGHEKVMESINAAIEVGYNPVKVNCVVMR- 237 (400)
Q Consensus 171 NG~ll-~~---~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~--------~~~~~v~~~i~~l~~~g~~~v~i~~~v~~- 237 (400)
|+..- ++ .++.|.+.++.+|.-.+...+-+.+..++.. ..+.. .+.++.+.+.+.-. .++.-+.+
T Consensus 226 n~~~~~~~ai~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~-~~~~~~~i~~~~~d-~v~ik~~~~ 303 (410)
T 2gl5_A 226 HSLLGTNSAIQFAKAIEKYRIFLYEEPIHPLNSDNMQKVSRSTTIPIATGERSYT-RWGYRELLEKQSIA-VAQPDLCLC 303 (410)
T ss_dssp TTCSCHHHHHHHHHHHGGGCEEEEECSSCSSCHHHHHHHHHHCSSCEEECTTCCT-THHHHHHHHTTCCS-EECCCTTTT
T ss_pred CCCCCHHHHHHHHHHHHhcCCCeEECCCChhhHHHHHHHHhhCCCCEEecCCcCC-HHHHHHHHHcCCCC-EEecCcccc
Confidence 97654 32 2244555666666544443344555555431 11111 23445555554301 11211111
Q ss_pred CCChhHHHHHHHHHHhCCCeE
Q 015786 238 GFNDDEICDFVELTRDRPINI 258 (400)
Q Consensus 238 ~~n~~el~~l~~~~~~~gv~~ 258 (400)
| ...+..+++++++..|+.+
T Consensus 304 G-Git~~~~ia~~A~~~gi~~ 323 (410)
T 2gl5_A 304 G-GITEGKKICDYANIYDTTV 323 (410)
T ss_dssp T-HHHHHHHHHHHHHTTTCEE
T ss_pred C-CHHHHHHHHHHHHHcCCeE
Confidence 1 2456788888888888764
No 319
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=22.27 E-value=3e+02 Score=23.15 Aligned_cols=75 Identities=13% Similarity=0.127 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHhCCCCEEEEECCC-ccch----h--------hHHHHHHHhhhcCCCceEEEEecCcchhhhHHHH-HH
Q 015786 119 LNEILRLAYLFVTSGVDKIRLTGGE-PTVR----K--------DIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKL-KE 184 (400)
Q Consensus 119 ~e~i~~ii~~~~~~g~~~i~~~GGE-Pll~----~--------~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l-~~ 184 (400)
.+.+.+.++.+..+|...|.+..|- +... . .+.++.+++++. |+ .+.+.+-+....+.+..+ .+
T Consensus 75 ~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~-gv-~l~lEn~~~~~~~~~~~l~~~ 152 (254)
T 3ayv_A 75 LRRLLFGLDRAAELGADRAVFHSGIPHGRTPEEALERALPLAEALGLVVRRARTL-GV-RLLLENSHEPHPEALRPVLEA 152 (254)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCCTTCCHHHHHHTHHHHHHHTHHHHHHHHHH-TC-EEEEECSSCSSGGGTHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEECCCCCcccccccHHHHHHHHHHHHHHHHHHHhhc-CC-EEEEcCCCCCCHHHHHHHHHh
Confidence 5677788888889999999887443 2211 1 123445555553 88 788876432222334333 34
Q ss_pred cCCCeEEEecCC
Q 015786 185 SGLTSVNISLDT 196 (400)
Q Consensus 185 ~g~~~i~iSldg 196 (400)
.+ ..+.+-+|.
T Consensus 153 v~-~~vg~~~D~ 163 (254)
T 3ayv_A 153 HA-GELGFCFDA 163 (254)
T ss_dssp HT-TSSEEEEEH
T ss_pred cC-cCEEEEEEc
Confidence 45 678888887
No 320
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=22.26 E-value=3.5e+02 Score=22.67 Aligned_cols=47 Identities=15% Similarity=0.055 Sum_probs=26.0
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEe
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTT 170 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~T 170 (400)
.++++. ++.+++.|...|.+.+ |. ..++.++.+.+++. |+....+.+
T Consensus 15 ~~~~~~---l~~~~~~G~~~vEl~~--~~-~~~~~~~~~~l~~~-gl~~~~~~~ 61 (260)
T 1k77_A 15 VPFIER---FAAARKAGFDAVEFLF--PY-NYSTLQIQKQLEQN-HLTLALFNT 61 (260)
T ss_dssp SCGGGH---HHHHHHHTCSEEECSC--CT-TSCHHHHHHHHHHT-TCEEEEEEC
T ss_pred CCHHHH---HHHHHHhCCCEEEecC--CC-CCCHHHHHHHHHHc-CCceEEEec
Confidence 445444 4445567888888876 21 12355666666664 773223443
No 321
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=22.22 E-value=4.6e+02 Score=24.11 Aligned_cols=93 Identities=12% Similarity=0.115 Sum_probs=0.0
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHh-hhcCCCceEEEEecCcchh-hhHHHHHHcC-CCeEEEe
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHL-SKLKGLKTLAMTTNGLTLA-RKLPKLKESG-LTSVNIS 193 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~-~~~~g~~~~~i~TNG~ll~-~~~~~l~~~g-~~~i~iS 193 (400)
++.++..++++.+.+.++.-|- ||+-..++..+-+.. +.. .+-|.++..+.+ +.+..+++.+ ++.|++.
T Consensus 206 ~~~~~A~~~~~~l~~~~i~~iE----qP~~~~d~~~~~~l~~~~~----~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ik 277 (389)
T 3ozy_A 206 LGRHDALAMLRILDEAGCYWFE----EPLSIDDIEGHRILRAQGT----PVRIATGENLYTRNAFNDYIRNDAIDVLQAD 277 (389)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEE----SCSCTTCHHHHHHHHTTCC----SSEEEECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred cCHHHHHHHHHHHHhcCCCEEE----CCCCcccHHHHHHHHhcCC----CCCEEeCCCCCCHHHHHHHHHcCCCCEEEeC
Q ss_pred cCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcE
Q 015786 194 LDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPV 229 (400)
Q Consensus 194 ldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v 229 (400)
+.-. +++...++....+.+.|+ ++
T Consensus 278 ~~~~-----------GGit~~~~ia~~A~~~gi-~~ 301 (389)
T 3ozy_A 278 ASRA-----------GGITEALAISASAASAHL-AW 301 (389)
T ss_dssp TTTS-----------SCHHHHHHHHHHHHHTTC-EE
T ss_pred cccc-----------CCHHHHHHHHHHHHHcCC-EE
No 322
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=22.18 E-value=3.1e+02 Score=24.32 Aligned_cols=133 Identities=14% Similarity=0.161 Sum_probs=82.0
Q ss_pred CHHHHHHHHHHHHhCCCCEEEE--ECCCccchhhHHHHHHHhhhcCCCceEEEEecCc-------------chhhhHHHH
Q 015786 118 SLNEILRLAYLFVTSGVDKIRL--TGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGL-------------TLARKLPKL 182 (400)
Q Consensus 118 s~e~i~~ii~~~~~~g~~~i~~--~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~-------------ll~~~~~~l 182 (400)
+.+++...+......| +.|.| +-|- +|..=..+++.+++.....-+++..|.. .+++++..|
T Consensus 7 ~~~~l~~~~~~~r~~g-~~I~fVpTmG~--lH~GH~~LI~~a~~~a~~vVvsffvnP~qf~~~ed~~~yprtle~d~~ll 83 (283)
T 3ag6_A 7 TVKEMQHIVKAAKRSG-TTIGFIPTMGA--LHDGHLTMVRESVSTNDITIVSVFVNPLQFGPNEDFDAYPRQIDKDLELV 83 (283)
T ss_dssp CHHHHHHHHHHHHHTT-CCEEEEEECSS--CCHHHHHHHHHHHTTSSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcC-CcEEEEECCcc--ccHHHHHHHHHHHHhCCEEEEEEeCChhhcCCccccccCCCCHHHHHHHH
Confidence 5778888887777666 34555 5453 9988888999988764432445555632 134667788
Q ss_pred HHcCCCeEEEecCCCCHHHHH----------Hh-------hcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHH
Q 015786 183 KESGLTSVNISLDTLVPAKFE----------FL-------TRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEIC 245 (400)
Q Consensus 183 ~~~g~~~i~iSldg~~~~~~~----------~i-------r~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~ 245 (400)
.+.|++.+-+ .+- ++.|- .+ .+.+.|+-+...+.+|...=. + -...+.. ....++.
T Consensus 84 ~~~GvD~vf~-p~~--~~myp~~f~~~v~~~~l~~~L~G~~rp~hF~GV~TVV~KLf~iV~-p--~~~~FG~-Kd~qql~ 156 (283)
T 3ag6_A 84 SEVGADIVFH-PAV--EDMYPGELGIDVKVGPLADVLEGAKRPGHFDGVVTVVNKLFNIVM-P--DYAYFGK-KDAQQLA 156 (283)
T ss_dssp HHHTCSEEEC-CCH--HHHSCSSCSEEEEECGGGSSTHHHHSTTHHHHHHHHHHHHHHHHC-C--SEEEEEG-GGHHHHH
T ss_pred HhCCCCEEEe-CCH--HHCCCCCceEEEeccccchhhccCCCCCeecchhhHhhhhcEEec-C--ceEEECC-CCccCHH
Confidence 8889986543 221 12111 00 122338888888888776522 1 1344544 3556788
Q ss_pred HHHHHHHhCCCeEEE
Q 015786 246 DFVELTRDRPINIRF 260 (400)
Q Consensus 246 ~l~~~~~~~gv~~~~ 260 (400)
-+-++.+++++++..
T Consensus 157 ~l~~m~~dl~~~V~i 171 (283)
T 3ag6_A 157 IVEQMVKDFNHAVEI 171 (283)
T ss_dssp HHHHHHHHTTCCCEE
T ss_pred HHHHHHHHcCCeEEE
Confidence 888888898887755
No 323
>3qas_B Undecaprenyl pyrophosphate synthase; alpha-helix, isoprenoid biosynthesis, transferase; 1.70A {Escherichia coli} PDB: 1jp3_A* 1v7u_A* 1x06_A* 1x07_A* 2e98_A* 2e99_A* 2e9a_A* 2e9c_A* 2e9d_A* 1ueh_A 1x09_A* 1x08_A*
Probab=22.11 E-value=3.3e+02 Score=23.65 Aligned_cols=30 Identities=17% Similarity=0.249 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhCCCCEEEEEC--CCccchh
Q 015786 119 LNEILRLAYLFVTSGVDKIRLTG--GEPTVRK 148 (400)
Q Consensus 119 ~e~i~~ii~~~~~~g~~~i~~~G--GEPll~~ 148 (400)
.+.+.++++...+.|++.++++. .|-+-+|
T Consensus 47 ~~~l~~iv~~c~~~GI~~lTlYaFStENwkRp 78 (253)
T 3qas_B 47 AKSVRRAVSFAANNGIEALTLYAFSSENWNRP 78 (253)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCC------
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEecCcccCCC
Confidence 57888899999999999999986 6655443
No 324
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=22.11 E-value=4.7e+02 Score=24.13 Aligned_cols=136 Identities=12% Similarity=0.081 Sum_probs=80.7
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEEC------CCccc----------hhh-HHHHHHHhhhc--CCCceEEEEecCcch-
Q 015786 116 LLSLNEILRLAYLFVTSGVDKIRLTG------GEPTV----------RKD-IEEACFHLSKL--KGLKTLAMTTNGLTL- 175 (400)
Q Consensus 116 ~~s~e~i~~ii~~~~~~g~~~i~~~G------GEPll----------~~~-l~~~i~~~~~~--~g~~~~~i~TNG~ll- 175 (400)
..+.+++.+.+..+.+.|...|.+.. |.+++ ..+ ..+.++.+++. ..+ .+.+.-|+..-
T Consensus 150 ~~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~G~d~-~l~vDan~~~~~ 228 (407)
T 2o56_A 150 LTEPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVGPDV-DIIAEMHAFTDT 228 (407)
T ss_dssp CCSHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHHCTTS-EEEEECTTCSCH
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhcCCCC-EEEEECCCCCCH
Confidence 45788888888888888988888864 53222 112 35666666653 245 68899997654
Q ss_pred hh---hHHHHHHcCCCeEEEecCCCCHHHHHHhhcC--------CCHHHHHHHHHHHHHcCCCcEEEEEEEecCC----C
Q 015786 176 AR---KLPKLKESGLTSVNISLDTLVPAKFEFLTRR--------KGHEKVMESINAAIEVGYNPVKVNCVVMRGF----N 240 (400)
Q Consensus 176 ~~---~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~--------~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~----n 240 (400)
++ .++.|.+.++.+|.-.+...+-+.+..++.. ..+.. .+.++.+.+.+. +.++..+ . .
T Consensus 229 ~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~-~~~~~~~i~~~~----~d~v~ik-~~~~GG 302 (407)
T 2o56_A 229 TSAIQFGRMIEELGIFYYEEPVMPLNPAQMKQVADKVNIPLAAGERIYW-RWGYRPFLENGS----LSVIQPD-ICTCGG 302 (407)
T ss_dssp HHHHHHHHHHGGGCCSCEECSSCSSSHHHHHHHHHHCCSCEEECTTCCH-HHHHHHHHHTTC----CSEECCC-TTTTTH
T ss_pred HHHHHHHHHHHhcCCCEEeCCCChhhHHHHHHHHHhCCCCEEeCCCcCC-HHHHHHHHHcCC----CCEEecC-ccccCC
Confidence 32 2345556778877755554444555555532 11222 344555555553 1222222 2 2
Q ss_pred hhHHHHHHHHHHhCCCeE
Q 015786 241 DDEICDFVELTRDRPINI 258 (400)
Q Consensus 241 ~~el~~l~~~~~~~gv~~ 258 (400)
..+..+++++++..|+.+
T Consensus 303 ite~~~i~~~A~~~g~~~ 320 (407)
T 2o56_A 303 ITEVKKICDMAHVYDKTV 320 (407)
T ss_dssp HHHHHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHHHHHcCCeE
Confidence 457788888888888764
No 325
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=22.07 E-value=3.2e+02 Score=23.15 Aligned_cols=95 Identities=15% Similarity=0.157 Sum_probs=58.4
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCc---cchhhHHHHHHHhh-hcCCCceEEEEec-C--cch---hhhHHHHHHcC
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEP---TVRKDIEEACFHLS-KLKGLKTLAMTTN-G--LTL---ARKLPKLKESG 186 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEP---ll~~~l~~~i~~~~-~~~g~~~~~i~TN-G--~ll---~~~~~~l~~~g 186 (400)
-+.+.+.+.++.+..+|...|.++.|-. .+...+.++++.+. + .|+ .+.+.+- + +.+ .+.+..+.+.
T Consensus 85 ~~~~~~~~~i~~a~~lGa~~vv~h~g~~~~~~~~~~l~~l~~~a~~~-~gv-~l~lEn~~~~~~~~~~~~~~~~~l~~~- 161 (270)
T 3aam_A 85 KSVASLADDLEKAALLGVEYVVVHPGSGRPERVKEGALKALRLAGVR-SRP-VLLVENTAGGGEKVGARFEELAWLVAD- 161 (270)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEECCCBSCHHHHHHHHHHHHHHHTCC-SSS-EEEEECCCCCTTBSCCSHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHhhccc-CCC-EEEEecCCCCCCccCCCHHHHHHHHHh-
Confidence 3577788888888889999999876653 11122455555555 4 477 7888775 2 222 3566677765
Q ss_pred CCeEEEecCCCCHHHHHHhhcCC---CHHHHHHHHH
Q 015786 187 LTSVNISLDTLVPAKFEFLTRRK---GHEKVMESIN 219 (400)
Q Consensus 187 ~~~i~iSldg~~~~~~~~ir~~~---~~~~v~~~i~ 219 (400)
+ .+.+.+|.. |-...+.. .++.+++.+.
T Consensus 162 v-~vg~~lD~~----H~~~~g~d~~~~~~~~l~~~~ 192 (270)
T 3aam_A 162 T-PLQVCLDTC----HAYAAGYDVAEDPLGVLDALD 192 (270)
T ss_dssp S-SCEEEEEHH----HHHHHTCCTTTCHHHHHHHHH
T ss_pred C-CEEEEEehh----hHHhccCCchhhHHHHHHHHH
Confidence 4 788888873 22333422 2556655443
No 326
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=22.05 E-value=3.3e+02 Score=22.28 Aligned_cols=115 Identities=14% Similarity=0.174 Sum_probs=65.0
Q ss_pred HHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEE-ecCcchhhhHHHHHHcCCCeEEEecCCCCHHHHH
Q 015786 125 LAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMT-TNGLTLARKLPKLKESGLTSVNISLDTLVPAKFE 203 (400)
Q Consensus 125 ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~-TNG~ll~~~~~~l~~~g~~~i~iSldg~~~~~~~ 203 (400)
.++.+.+.|...|.+.+ +|. ..++.++++.+++. |. .+.+. .+.....+.+..+.+.|.+.|.+. -|.+...+
T Consensus 69 ~~~~~~~~Gad~v~v~~-~~~-~~~~~~~~~~~~~~-g~-~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~-~g~~g~~~- 142 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLG-VTD-VLTIQSCIRAAKEA-GK-QVVVDMICVDDLPARVRLLEEAGADMLAVH-TGTDQQAA- 142 (211)
T ss_dssp HHHHHHHTTCSEEEEET-TSC-HHHHHHHHHHHHHH-TC-EEEEECTTCSSHHHHHHHHHHHTCCEEEEE-CCHHHHHT-
T ss_pred HHHHHHhcCCCEEEEeC-CCC-hhHHHHHHHHHHHc-CC-eEEEEecCCCCHHHHHHHHHHcCCCEEEEc-CCCccccc-
Confidence 46777789999888864 442 24467888888875 76 55553 333333466788888899987665 22111111
Q ss_pred HhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHHHHhCCCeEE
Q 015786 204 FLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINIR 259 (400)
Q Consensus 204 ~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~~~ 259 (400)
+.. .++.++.+++.-. . +.+.+.-|.+.+++.+++ +.|++..
T Consensus 143 ---~~~----~~~~i~~l~~~~~-~--~~i~~~gGI~~~~~~~~~----~~Gad~v 184 (211)
T 3f4w_A 143 ---GRK----PIDDLITMLKVRR-K--ARIAVAGGISSQTVKDYA----LLGPDVV 184 (211)
T ss_dssp ---TCC----SHHHHHHHHHHCS-S--CEEEEESSCCTTTHHHHH----TTCCSEE
T ss_pred ---CCC----CHHHHHHHHHHcC-C--CcEEEECCCCHHHHHHHH----HcCCCEE
Confidence 111 2344455555411 1 233455577766665554 3566543
No 327
>2z6r_A Diphthine synthase; methyltransferase, S-adenosyl-L-methionine, transferase; HET: SAH MES; 1.50A {Pyrococcus horikoshii} PDB: 2dek_A* 1wng_A* 1vce_A* 2ed3_A* 2e4r_A* 2owg_A* 2ek3_A* 2pcm_A* 2p5c_A* 2hut_A* 2emr_A* 2el3_A* 2el0_A* 2ejk_A* 2eld_A* 2el2_A* 2eka_A* 2eh5_A* 2pcg_A* 2el1_A* ...
Probab=22.04 E-value=1.2e+02 Score=26.30 Aligned_cols=39 Identities=21% Similarity=0.174 Sum_probs=28.9
Q ss_pred CCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCc
Q 015786 133 GVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGL 173 (400)
Q Consensus 133 g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ 173 (400)
|-..+.+.+|+|+++--..++++.+.+. |+ .+.+.-.-+
T Consensus 77 g~~V~~l~~GDP~i~~~~~~l~~~l~~~-gi-~veviPGiS 115 (265)
T 2z6r_A 77 ENDVAFLTPGDPLVATTHAELRIRAKRA-GV-ESYVIHAPS 115 (265)
T ss_dssp TSCEEEEESBCTTSSSSTHHHHHHHHHT-TC-CEEEECCCC
T ss_pred CCcEEEEECCCCcCCCCHHHHHHHHHHC-CC-cEEEECChh
Confidence 5567778899999986667888888874 77 677765433
No 328
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=21.97 E-value=2.1e+02 Score=27.97 Aligned_cols=60 Identities=13% Similarity=0.228 Sum_probs=42.6
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEE--------------------C---------CCccchhhHHHHHHHhhhcCCC
Q 015786 113 KPQLLSLNEILRLAYLFVTSGVDKIRLT--------------------G---------GEPTVRKDIEEACFHLSKLKGL 163 (400)
Q Consensus 113 ~~~~~s~e~i~~ii~~~~~~g~~~i~~~--------------------G---------GEPll~~~l~~~i~~~~~~~g~ 163 (400)
.+..++.+.++++|+.+...+...+.++ | |+.....++.++++++++. ||
T Consensus 192 sR~f~~~~~ik~~id~mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~Ga~~~~~~~~~g~YT~~di~eIv~YA~~r-gI 270 (525)
T 3gh5_A 192 ARHFFTVDEVKRQIDLASQYKINKFHMHLSDDQGWRIEIKSWPDLIEIGSKGQVGGGPGGYYTQEQFKDIVSYAAER-YI 270 (525)
T ss_dssp SSSCCCHHHHHHHHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTSCCTTSSCCCCBCHHHHHHHHHHHHTT-TC
T ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEEEEeccCCccccccccchhhhhccCccccCCCCCCCcCHHHHHHHHHHHHHc-CC
Confidence 3567899999999999998887776664 1 2334456789999999884 87
Q ss_pred ceEE--EEecCcc
Q 015786 164 KTLA--MTTNGLT 174 (400)
Q Consensus 164 ~~~~--i~TNG~l 174 (400)
.|. |.+=|..
T Consensus 271 -~VIPEID~PGH~ 282 (525)
T 3gh5_A 271 -EVIPEIDMPGHT 282 (525)
T ss_dssp -EEEEECCCSSSC
T ss_pred -EEEEEecccchH
Confidence 443 4454543
No 329
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=21.95 E-value=1.4e+02 Score=26.21 Aligned_cols=51 Identities=22% Similarity=0.165 Sum_probs=35.7
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEEC---CC--c---------------cchhhHHHHHHHhhhcCCCceEEE
Q 015786 116 LLSLNEILRLAYLFVTSGVDKIRLTG---GE--P---------------TVRKDIEEACFHLSKLKGLKTLAM 168 (400)
Q Consensus 116 ~~s~e~i~~ii~~~~~~g~~~i~~~G---GE--P---------------ll~~~l~~~i~~~~~~~g~~~~~i 168 (400)
..+.+.+++.++.+++.|+..|.+-+ |+ | ...+.+.++++.+.+. |+ .|.+
T Consensus 38 ~~~~~~~~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~-Gi-~vil 108 (351)
T 3vup_A 38 QRNKNRIEPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKY-NI-LVFP 108 (351)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHT-TC-EEEE
T ss_pred cCCHHHHHHHHHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHC-CC-eEEE
Confidence 35678899999999999999998743 11 1 2234567788888774 87 4544
No 330
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=21.81 E-value=2.1e+02 Score=27.74 Aligned_cols=60 Identities=13% Similarity=0.105 Sum_probs=44.0
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEEC------------------------CCccchhhHHHHHHHhhhcCCCceE--
Q 015786 113 KPQLLSLNEILRLAYLFVTSGVDKIRLTG------------------------GEPTVRKDIEEACFHLSKLKGLKTL-- 166 (400)
Q Consensus 113 ~~~~~s~e~i~~ii~~~~~~g~~~i~~~G------------------------GEPll~~~l~~~i~~~~~~~g~~~~-- 166 (400)
.+..++.+.++++|+.+...+...+.++= |+.....++.++++++++. || .|
T Consensus 161 aR~f~~~~~ik~~id~ma~~KlN~lh~HltDdq~wr~e~~~~P~Lt~~Ga~~~~~~YT~~di~eiv~yA~~r-gI-~VIP 238 (507)
T 1now_A 161 SRHYLPVKIILKTLDAMAFNKFNVLHWHIVDDQSFPYQSITFPELSNKGSYSLSHVYTPNDVRMVIEYARLR-GI-RVLP 238 (507)
T ss_dssp SSSCCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCBCCSSCHHHHHHHSSSTTSCBCHHHHHHHHHHHHHT-TC-EEEE
T ss_pred CCCCCCHHHHHHHHHHHHHhCCcEEEEeeccCccceeeccchhhhhcccCcCCCCCCCHHHHHHHHHHHHHc-CC-EEEE
Confidence 35678999999999999988877777641 2233445689999999985 88 34
Q ss_pred EEEecCcc
Q 015786 167 AMTTNGLT 174 (400)
Q Consensus 167 ~i~TNG~l 174 (400)
.|.+=|..
T Consensus 239 EID~PGH~ 246 (507)
T 1now_A 239 EFDTPGHT 246 (507)
T ss_dssp EEEESSSC
T ss_pred ccCCchhH
Confidence 46666654
No 331
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=21.66 E-value=1.7e+02 Score=28.87 Aligned_cols=60 Identities=18% Similarity=0.194 Sum_probs=36.7
Q ss_pred hhhHHHHHHcCCCeEEEec--C-----CCCHHHHHHhhc-CCCHHHHHHHHHHHHHcCCCcEEEEEEEe
Q 015786 176 ARKLPKLKESGLTSVNISL--D-----TLVPAKFEFLTR-RKGHEKVMESINAAIEVGYNPVKVNCVVM 236 (400)
Q Consensus 176 ~~~~~~l~~~g~~~i~iSl--d-----g~~~~~~~~ir~-~~~~~~v~~~i~~l~~~g~~~v~i~~~v~ 236 (400)
.+++..|++.|++.|.++- + |.++..|..+.. -++-+...+-++.+.+.|+ .|.+-.|+.
T Consensus 179 ~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi-~VilD~V~N 246 (588)
T 1j0h_A 179 IDHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGI-RVMLDAVFN 246 (588)
T ss_dssp HHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTC-EEEEEECCS
T ss_pred HHHHHHHHHcCCCEEEECCcccCCCCCCcCccccCccCccCCCHHHHHHHHHHHHHCCC-EEEEEECcC
Confidence 4667888888888888872 1 222222222222 1336777777777788888 777776664
No 332
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=21.62 E-value=2.2e+02 Score=27.64 Aligned_cols=50 Identities=14% Similarity=0.116 Sum_probs=38.1
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEEC-------------------------CCccchhhHHHHHHHhhhcCCC
Q 015786 113 KPQLLSLNEILRLAYLFVTSGVDKIRLTG-------------------------GEPTVRKDIEEACFHLSKLKGL 163 (400)
Q Consensus 113 ~~~~~s~e~i~~ii~~~~~~g~~~i~~~G-------------------------GEPll~~~l~~~i~~~~~~~g~ 163 (400)
.+..++.+.++++|+.+...+...+.++= |+.....++.++++++++. ||
T Consensus 155 aR~f~~~~~ik~~id~mA~~KlN~lh~HltDdq~wr~ei~~~P~Lt~~Ga~~~~~~~YT~~di~eiv~yA~~r-gI 229 (507)
T 2gjx_A 155 SRHYLPLSSILDTLDVMAYNKLNVFHWHLVDDPSFPYESFTFPELMRKGSYNPVTHIYTAQDVKEVIEYARLR-GI 229 (507)
T ss_dssp TTSCCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCBCCSSCTHHHHHHSSCTTTSCBCHHHHHHHHHHHHHT-TC
T ss_pred CCCCCCHHHHHHHHHHHHHhCCceEEEEEecccCeeeeccccchhhhccccCCCCCCcCHHHHHHHHHHHHHc-CC
Confidence 35678999999999999988877777641 2223345689999999984 77
No 333
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=21.62 E-value=3.3e+02 Score=27.22 Aligned_cols=82 Identities=24% Similarity=0.314 Sum_probs=53.0
Q ss_pred CCCCCCHHHHHHHHHHHH-------hCCCCEEEEECCC---------ccch-------------hh-HHHHHHHhhhcCC
Q 015786 113 KPQLLSLNEILRLAYLFV-------TSGVDKIRLTGGE---------PTVR-------------KD-IEEACFHLSKLKG 162 (400)
Q Consensus 113 ~~~~~s~e~i~~ii~~~~-------~~g~~~i~~~GGE---------Pll~-------------~~-l~~~i~~~~~~~g 162 (400)
..+.|+.++|.++++.+. +.|.+.|.++||. |..+ .. +.++++.+++.-|
T Consensus 127 ~p~~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG 206 (671)
T 1ps9_A 127 VPHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVG 206 (671)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHC
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcC
Confidence 356799999988887653 4789999998875 4432 22 4678888776432
Q ss_pred --Cc-eEEEEec-----Ccchh---hhHHHHHHcCCCeEEEec
Q 015786 163 --LK-TLAMTTN-----GLTLA---RKLPKLKESGLTSVNISL 194 (400)
Q Consensus 163 --~~-~~~i~TN-----G~ll~---~~~~~l~~~g~~~i~iSl 194 (400)
+. .+.|..+ |...+ +.+..|.+.|++.|.+|.
T Consensus 207 ~~~~v~vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v~~ 249 (671)
T 1ps9_A 207 NDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGI 249 (671)
T ss_dssp SSSEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CCceEEEEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEcCC
Confidence 21 2344432 43333 234677788999999985
No 334
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=21.56 E-value=1.5e+02 Score=29.71 Aligned_cols=49 Identities=12% Similarity=0.209 Sum_probs=39.6
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEE-------------C--CCccchhhHHHHHHHhhhcCCCceE
Q 015786 116 LLSLNEILRLAYLFVTSGVDKIRLT-------------G--GEPTVRKDIEEACFHLSKLKGLKTL 166 (400)
Q Consensus 116 ~~s~e~i~~ii~~~~~~g~~~i~~~-------------G--GEPll~~~l~~~i~~~~~~~g~~~~ 166 (400)
.++.+.++++|+.+...+...+.++ | |.+....++.++++++++. |+ .|
T Consensus 98 f~~~~~ik~~id~ma~~KlN~lh~Hl~D~~ei~~~P~l~~~~~~YT~~di~eiv~yA~~r-gI-~V 161 (627)
T 2epl_X 98 VLNLSSAKKMIEVLALMGYSTFELYMEDTYEIENQPYFGYFRGRYTVAELQEIEDYAADF-DM-SF 161 (627)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEEEEECSSCBCCTTCTTTTTTTTCBCHHHHHHHHHHHHHT-TC-EE
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEEeecccccCCCcccCccCCCcCHHHHHHHHHHHHHc-CC-EE
Confidence 7899999999999998887777764 1 4555667799999999985 88 44
No 335
>2kl5_A Uncharacterized protein YUTD; structural genomics, protein northeast structural genom consortium (NESG), target SR232, PSI-2; NMR {Bacillus subtilis}
Probab=21.32 E-value=17 Score=27.19 Aligned_cols=21 Identities=29% Similarity=0.516 Sum_probs=14.3
Q ss_pred ccEEEEEcCcccCCCCCCCCC
Q 015786 84 HTYLRISLTERCNLRCHYCMP 104 (400)
Q Consensus 84 ~~~l~i~iT~~CNl~C~yC~~ 104 (400)
++.|.=.+...||+.|.|=-.
T Consensus 77 Is~L~DYL~EYCNFGCaYFVL 97 (110)
T 2kl5_A 77 ISTLDEYIYEYCNFGCAYFVL 97 (110)
T ss_dssp CTTHHHHHHHSSCSSCCEEEE
T ss_pred cchHHHHHHHHccCCCceEEE
Confidence 334444467899999998543
No 336
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=21.29 E-value=3.9e+02 Score=22.86 Aligned_cols=127 Identities=13% Similarity=0.172 Sum_probs=79.9
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEe---cCcchh----hhHHHHHHcCC
Q 015786 115 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTT---NGLTLA----RKLPKLKESGL 187 (400)
Q Consensus 115 ~~~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~T---NG~ll~----~~~~~l~~~g~ 187 (400)
...+.+++.+++++..++++..|++ +|.+......++. .++ .+.... .|...+ .+.+..++.|.
T Consensus 24 p~~t~~~i~~lc~eA~~~~~~aVcV-------~p~~v~~a~~l~~-~~v-~v~tVigFP~G~~~~~~K~~E~~~Ai~~GA 94 (231)
T 3ndo_A 24 PEATPSDVTALVDEAADLGVFAVCV-------SPPLVSVAAGVAP-SGL-AIAAVAGFPSGKHVPGIKATEAELAVAAGA 94 (231)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEE-------CGGGHHHHHHHCC-TTC-EEEEEESTTTCCSCHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHhCCcEEEE-------CHHHHHHHHHhcC-CCC-eEEEEecCCCCCCcHHHHHHHHHHHHHcCC
Confidence 4578999999999999999888886 4555454443433 355 344333 122111 23456677899
Q ss_pred CeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecC-C----ChhHHHHHHHHHHhCCCeE
Q 015786 188 TSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRG-F----NDDEICDFVELTRDRPINI 258 (400)
Q Consensus 188 ~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~-~----n~~el~~l~~~~~~~gv~~ 258 (400)
+.|.+-++-. .+. .+.++.+.+-|..+.+.-- ...+.+.+-.+ . +.+++....+.+.+.|.++
T Consensus 95 dEIDmVinig------~lk-~g~~~~v~~ei~~v~~a~~-~~~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGADf 162 (231)
T 3ndo_A 95 TEIDMVIDVG------AAL-AGDLDAVSADITAVRKAVR-AATLKVIVESAALLEFSGEPLLADVCRVARDAGADF 162 (231)
T ss_dssp SEEEEECCHH------HHH-TTCHHHHHHHHHHHHHHTT-TSEEEEECCHHHHHHHTCHHHHHHHHHHHHHTTCSE
T ss_pred CEEEEEeehH------hhh-cccHHHHHHHHHHHHHHcc-CCceEEEEECcccCCCCCHHHHHHHHHHHHHHCcCE
Confidence 8888877541 111 2458888888888887621 22233333222 3 6778899999999998875
No 337
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=21.18 E-value=1.4e+02 Score=28.03 Aligned_cols=27 Identities=11% Similarity=0.247 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEEEecCCC
Q 015786 212 EKVMESINAAIEVGYNPVKVNCVVMRGFN 240 (400)
Q Consensus 212 ~~v~~~i~~l~~~g~~~v~i~~~v~~~~n 240 (400)
+.+++.++...+.|+. ++++-......
T Consensus 122 ~~~~~~~~~Wl~~gvD--GfRlD~v~~~~ 148 (424)
T 2dh2_A 122 TKVKDALEFWLQAGVD--GFQVRDIENLK 148 (424)
T ss_dssp HHHHHHHHHHHHHTCC--EEEECCGGGST
T ss_pred HHHHHHHHHHHHcCCC--EEEEeccccCC
Confidence 5678888888888883 56775544333
No 338
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=21.10 E-value=4.3e+02 Score=24.08 Aligned_cols=96 Identities=14% Similarity=0.065 Sum_probs=56.5
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchh-hhHHHHHHcC-CCeEEEec
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLA-RKLPKLKESG-LTSVNISL 194 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~-~~~~~l~~~g-~~~i~iSl 194 (400)
++.++..++++.+.+.++.-|- ||+-..++.. ++.+++..++ -|.++..+.+ ..+..+++.+ ++.|++.+
T Consensus 199 ~~~~~a~~~~~~l~~~~i~~iE----qP~~~~~~~~-~~~l~~~~~i---Pia~dE~~~~~~~~~~~~~~~~~d~v~~k~ 270 (370)
T 1chr_A 199 WDEQVASVYIPELEALGVELIE----QPVGRENTQA-LRRLSDNNRV---AIMADESLSTLASAFDLARDRSVDVFSLKL 270 (370)
T ss_dssp CCTTHHHHHTHHHHTTTEEEEE----CCSCTTCHHH-HHHHHHHSCS---EEEESSSCCSHHHHHHHHTTTSCSEEEECT
T ss_pred CCHHHHHHHHHHHHhcCCCEEE----CCCCcccHHH-HHHHHhhCCC---CEEeCCCcCCHHHHHHHHHcCCCCEEEECc
Confidence 4556666677777666644333 6765444433 3344443333 4555665543 4455666543 66666654
Q ss_pred CCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEE
Q 015786 195 DTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVN 232 (400)
Q Consensus 195 dg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~ 232 (400)
.- .+++...++....+.+.|+ ++.+.
T Consensus 271 ~~-----------~GGit~~~~i~~~A~~~g~-~~~~~ 296 (370)
T 1chr_A 271 CN-----------MGGVSATQKIAAVAEASGI-ASYGG 296 (370)
T ss_dssp TT-----------SCSHHHHHHHHHHHHHHTC-EEEEC
T ss_pred cc-----------cCCHHHHHHHHHHHHHcCC-eEEec
Confidence 32 3568888999999999998 55443
No 339
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=21.09 E-value=2.7e+02 Score=23.58 Aligned_cols=77 Identities=19% Similarity=0.241 Sum_probs=47.5
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEC-CCcc---ch--------hhHHHHHHHhhhcCCCceEEEEe-cC------cch--h
Q 015786 118 SLNEILRLAYLFVTSGVDKIRLTG-GEPT---VR--------KDIEEACFHLSKLKGLKTLAMTT-NG------LTL--A 176 (400)
Q Consensus 118 s~e~i~~ii~~~~~~g~~~i~~~G-GEPl---l~--------~~l~~~i~~~~~~~g~~~~~i~T-NG------~ll--~ 176 (400)
..+.+.+.++.+..+|...|.+.. +-|- -. ..+.++.+.+++. |+ .+.+.+ ++ ..+ .
T Consensus 81 ~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~-gv-~l~lE~~~~~~~~~~~~~~~~ 158 (275)
T 3qc0_A 81 AIDDNRRAVDEAAELGADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAA-GV-PLAIEPLHPMYAADRACVNTL 158 (275)
T ss_dssp HHHHHHHHHHHHHHTTCSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHH-TC-CEEECCCCGGGTTTTBSCCCH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHc-CC-EEEEeECCCcccCCccccCCH
Confidence 356788888888899998888764 3441 11 1244555566554 88 788886 33 223 2
Q ss_pred hhHHHHHH-cCCCeEEEecCCC
Q 015786 177 RKLPKLKE-SGLTSVNISLDTL 197 (400)
Q Consensus 177 ~~~~~l~~-~g~~~i~iSldg~ 197 (400)
+.+..+++ .+- .+.+.+|..
T Consensus 159 ~~~~~l~~~~~~-~vg~~~D~~ 179 (275)
T 3qc0_A 159 GQALDICETLGP-GVGVAIDVY 179 (275)
T ss_dssp HHHHHHHHHHCT-TEEEEEEHH
T ss_pred HHHHHHHHHhCc-ccEEEEEhh
Confidence 44544444 444 788888873
No 340
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=21.07 E-value=1.4e+02 Score=27.51 Aligned_cols=34 Identities=9% Similarity=-0.002 Sum_probs=18.7
Q ss_pred CCEEEEECCCcc-------chhhHHHHHHHhhhcCCCceEEE
Q 015786 134 VDKIRLTGGEPT-------VRKDIEEACFHLSKLKGLKTLAM 168 (400)
Q Consensus 134 ~~~i~~~GGEPl-------l~~~l~~~i~~~~~~~g~~~~~i 168 (400)
.-.|.|++.|.. ...+..++++.+.+. |+..+.+
T Consensus 229 ~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~-Gvd~i~v 269 (361)
T 3gka_A 229 RVGVHLAPRGDAHTMGDSDPAATFGHVARELGRR-RIAFLFA 269 (361)
T ss_dssp GEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHT-TCSEEEE
T ss_pred eEEEecccccccCCCCCCCcHHHHHHHHHHHHHc-CCCEEEE
Confidence 345667653321 123456777777764 7754554
No 341
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=20.95 E-value=4.2e+02 Score=23.12 Aligned_cols=150 Identities=17% Similarity=0.141 Sum_probs=84.5
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEC--CCccchh------------------hHHHHHHHhhhc-CCCceEEEEe--cCc
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTG--GEPTVRK------------------DIEEACFHLSKL-KGLKTLAMTT--NGL 173 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~G--GEPll~~------------------~l~~~i~~~~~~-~g~~~~~i~T--NG~ 173 (400)
-+.+...++++.+.+.|++-|.+.= -+|+..- ++.++++.+++. ..+ .+.+-| |..
T Consensus 29 P~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~-Pivlm~Y~npv 107 (267)
T 3vnd_A 29 PSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDM-PIGLLLYANLV 107 (267)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTC-CEEEEECHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCC-CEEEEecCcHH
Confidence 4688899999999999987777652 6666531 335677777764 345 344433 432
Q ss_pred c---hhhhHHHHHHcCCCeEEEecCCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHHH
Q 015786 174 T---LARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVEL 250 (400)
Q Consensus 174 l---l~~~~~~l~~~g~~~i~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~~ 250 (400)
. +++.++.+.++|++.+.+. |-+. +...+.++.+.+.|+ .. -..+.+....+.+..+.+.
T Consensus 108 ~~~g~e~f~~~~~~aGvdgvii~-Dlp~-------------ee~~~~~~~~~~~gl-~~--i~liaP~t~~eri~~i~~~ 170 (267)
T 3vnd_A 108 FANGIDEFYTKAQAAGVDSVLIA-DVPV-------------EESAPFSKAAKAHGI-AP--IFIAPPNADADTLKMVSEQ 170 (267)
T ss_dssp HHHCHHHHHHHHHHHTCCEEEET-TSCG-------------GGCHHHHHHHHHTTC-EE--ECEECTTCCHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHcCCCEEEeC-CCCH-------------hhHHHHHHHHHHcCC-eE--EEEECCCCCHHHHHHHHHh
Confidence 1 2456688999999988884 4432 234455677788887 32 3344553344555555554
Q ss_pred HHhCCCeEEEEeeecCCCCCCcccCCCCHHHHHHHHHHh
Q 015786 251 TRDRPINIRFIEFMPFDGNVWNVKKLVPYAEMLDTVVKK 289 (400)
Q Consensus 251 ~~~~gv~~~~~~~~p~~~~~~~~~~~~~~~e~~~~i~~~ 289 (400)
.. |+ +..+...++.|.... ......++++.+++.
T Consensus 171 ~~--gf-vY~vS~~GvTG~~~~--~~~~~~~~v~~vr~~ 204 (267)
T 3vnd_A 171 GE--GY-TYLLSRAGVTGTESK--AGEPIENILTQLAEF 204 (267)
T ss_dssp CC--SC-EEESCCCCCC----------CHHHHHHHHHTT
T ss_pred CC--Cc-EEEEecCCCCCCccC--CcHHHHHHHHHHHHh
Confidence 22 22 333344444343211 123355667776654
No 342
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=20.91 E-value=1.8e+02 Score=28.64 Aligned_cols=58 Identities=17% Similarity=0.271 Sum_probs=27.6
Q ss_pred hhHHHHHHcCCCeEEEec-------CCCCHHHHHHhhcC-CCHHHHHHHHHHHHHcCCCcEEEEEEE
Q 015786 177 RKLPKLKESGLTSVNISL-------DTLVPAKFEFLTRR-KGHEKVMESINAAIEVGYNPVKVNCVV 235 (400)
Q Consensus 177 ~~~~~l~~~g~~~i~iSl-------dg~~~~~~~~ir~~-~~~~~v~~~i~~l~~~g~~~v~i~~~v 235 (400)
+++..|++.|++.|.++- .|.++..|..+... ++-+...+-++.+.+.|+ .|.+-.|+
T Consensus 177 ~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi-~VilD~V~ 242 (585)
T 1wzl_A 177 DRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGI-KIILDAVF 242 (585)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTC-EEEEEECC
T ss_pred HHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCC-EEEEEEcC
Confidence 455666666666666651 11122222122211 224555555556666666 55555554
No 343
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=20.73 E-value=3.7e+02 Score=24.49 Aligned_cols=134 Identities=10% Similarity=0.059 Sum_probs=73.7
Q ss_pred CHHHHHHHHHHHHhC-CCCEEEEE-CCCccchhhHHHHHHHhhhc--CCCceEEEEecCcchhhhH----HHHHHcCCCe
Q 015786 118 SLNEILRLAYLFVTS-GVDKIRLT-GGEPTVRKDIEEACFHLSKL--KGLKTLAMTTNGLTLARKL----PKLKESGLTS 189 (400)
Q Consensus 118 s~e~i~~ii~~~~~~-g~~~i~~~-GGEPll~~~l~~~i~~~~~~--~g~~~~~i~TNG~ll~~~~----~~l~~~g~~~ 189 (400)
+.+++.+.+..+.+. |...+.+- |++|. ..+ .+.++.+++. .++ .+.+.-|+..-.+.. +.|.+.++.+
T Consensus 139 ~~~~~~~~a~~~~~~~G~~~~K~K~g~~~~-~~d-~~~v~avR~a~g~~~-~l~vDan~~~~~~~a~~~~~~l~~~~i~~ 215 (367)
T 3dg3_A 139 DPVKMVAEAERIRETYGINTFKVKVGRRPV-QLD-TAVVRALRERFGDAI-ELYVDGNRGWSAAESLRAMREMADLDLLF 215 (367)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECCCSST-HHH-HHHHHHHHHHHGGGS-EEEEECTTCSCHHHHHHHHHHTTTSCCSC
T ss_pred CHHHHHHHHHHHHHhcCccEEEEeeCCChh-hhH-HHHHHHHHHHhCCCC-EEEEECCCCCCHHHHHHHHHHHHHhCCCE
Confidence 578887777777776 88888885 45553 122 3344444442 245 688999987653332 4444557777
Q ss_pred EEEecCCCCHHHHHHhhcC--------CCHHHHHHHHHHHHHcC-CCcEEEEEEEecCCChhHHHHHHHHHHhCCCeE
Q 015786 190 VNISLDTLVPAKFEFLTRR--------KGHEKVMESINAAIEVG-YNPVKVNCVVMRGFNDDEICDFVELTRDRPINI 258 (400)
Q Consensus 190 i~iSldg~~~~~~~~ir~~--------~~~~~v~~~i~~l~~~g-~~~v~i~~~v~~~~n~~el~~l~~~~~~~gv~~ 258 (400)
|.=.+...+.+.+..++.. .+... ...++.+.+.| .+- ++.-+.+- -..+..++.++++..|+.+
T Consensus 216 iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~-~~~~~~~i~~~~~d~--v~~k~~~~-Git~~~~ia~~A~~~gi~~ 289 (367)
T 3dg3_A 216 AEELCPADDVLSRRRLVGQLDMPFIADESVPT-PADVTREVLGGSATA--ISIKTART-GFTGSTRVHHLAEGLGLDM 289 (367)
T ss_dssp EESCSCTTSHHHHHHHHHHCSSCEEECTTCSS-HHHHHHHHHHTSCSE--EEECHHHH-TTHHHHHHHHHHHHHTCEE
T ss_pred EECCCCcccHHHHHHHHHhCCCCEEecCCcCC-HHHHHHHHHcCCCCE--EEeehhhh-hHHHHHHHHHHHHHcCCeE
Confidence 7644443334455555532 11111 22333444444 322 33333331 2466778888888888765
No 344
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=20.67 E-value=4.8e+02 Score=23.74 Aligned_cols=99 Identities=14% Similarity=0.111 Sum_probs=0.0
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchhhhHHHHHHcCCCeEEEecCC
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDT 196 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~~~~~~l~~~g~~~i~iSldg 196 (400)
++.++..++++.+.+.++.-|- ||+-..++..+-+..++. ++ .+...=+-+...+....+....++.|++.+.-
T Consensus 195 ~~~~~A~~~~~~l~~~~i~~iE----qP~~~~~~~~~~~l~~~~-~i-PIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~ 268 (368)
T 3q45_A 195 WSVETAIETLTLLEPYNIQHCE----EPVSRNLYTALPKIRQAC-RI-PIMADESCCNSFDAERLIQIQACDSFNLKLSK 268 (368)
T ss_dssp BCHHHHHHHHHHHGGGCCSCEE----CCBCGGGGGGHHHHHHTC-SS-CEEESTTCCSHHHHHHHHHTTCCSEEEECTTT
T ss_pred CChHHHHHHHHHHhhcCCCEEE----CCCChhHHHHHHHHHhhC-CC-CEEEcCCcCCHHHHHHHHHcCCCCeEEechhh
Q ss_pred CCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEE
Q 015786 197 LVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNC 233 (400)
Q Consensus 197 ~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~ 233 (400)
. +++...++....+.+.|+ ++.+.+
T Consensus 269 ~-----------GGit~~~~i~~~A~~~gi-~~~~~~ 293 (368)
T 3q45_A 269 S-----------AGITNALNIIRLAEQAHM-PVQVGG 293 (368)
T ss_dssp T-----------TSHHHHHHHHHHHHHTTC-CEEECC
T ss_pred c-----------CCHHHHHHHHHHHHHcCC-cEEecC
No 345
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=20.53 E-value=5e+02 Score=23.86 Aligned_cols=97 Identities=15% Similarity=0.189 Sum_probs=59.1
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEECCCccchhhHHHHHHHhhhcCCCceEEEEecCcchh-hhHHHHHHcC-CCeEEEec
Q 015786 117 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLA-RKLPKLKESG-LTSVNISL 194 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~~~GGEPll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll~-~~~~~l~~~g-~~~i~iSl 194 (400)
++.++..++++.+.+.++..|- ||+-..++ +..+.+++..++ -|.+...+.+ +.+..+++.+ ++.|++.+
T Consensus 200 ~~~~~a~~~~~~l~~~~i~~iE----qP~~~~~~-~~~~~l~~~~~i---PIa~dE~~~~~~~~~~~i~~~~~d~v~ik~ 271 (397)
T 2qde_A 200 WTYDQALTTIRALEKYNLSKIE----QPLPAWDL-DGMARLRGKVAT---PIYADESAQELHDLLAIINKGAADGLMIKT 271 (397)
T ss_dssp CCHHHHHHHHHHHGGGCCSCEE----CCSCTTCH-HHHHHHHTTCSS---CEEESTTCCSHHHHHHHHHHTCCSEEEECH
T ss_pred CCHHHHHHHHHHHHhCCCCEEE----CCCChhhH-HHHHHHHhhCCC---CEEEeCCcCCHHHHHHHHHcCCCCEEEEec
Confidence 4677777777777777765543 67543333 334444443233 4556665543 4455555543 56666542
Q ss_pred CCCCHHHHHHhhcCCCHHHHHHHHHHHHHcCCCcEEEEE
Q 015786 195 DTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNC 233 (400)
Q Consensus 195 dg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~ 233 (400)
...+++...++.++.+.+.|+ ++.+.+
T Consensus 272 -----------~~~GGit~~~~i~~~A~~~g~-~~~~~~ 298 (397)
T 2qde_A 272 -----------QKAGGLLKAQRWLTLARLANL-PVICGC 298 (397)
T ss_dssp -----------HHHTSHHHHHHHHHHHHHHTC-CEEECC
T ss_pred -----------cccCCHHHHHHHHHHHHHcCC-eEEEec
Confidence 223568999999999999999 766664
No 346
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=20.50 E-value=3.7e+02 Score=23.91 Aligned_cols=125 Identities=17% Similarity=0.151 Sum_probs=65.6
Q ss_pred CCHHHHHHHHHHHHhCCCCEEE---EECCCccchhhHHHHHHHhhhcCC--CceEEEEecCcc-------hhhhH-HHHH
Q 015786 117 LSLNEILRLAYLFVTSGVDKIR---LTGGEPTVRKDIEEACFHLSKLKG--LKTLAMTTNGLT-------LARKL-PKLK 183 (400)
Q Consensus 117 ~s~e~i~~ii~~~~~~g~~~i~---~~GGEPll~~~l~~~i~~~~~~~g--~~~~~i~TNG~l-------l~~~~-~~l~ 183 (400)
.+.++..++++.+.+.|+..|. .+|.|.. +-+.++...+..+ -..+.|+|-... +.+.+ ..|.
T Consensus 30 ~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~----lG~al~~~~~~~~~~R~~~~I~TK~~~~~~~~~~v~~~~~~SL~ 105 (324)
T 3ln3_A 30 VPXSXSLEAACLALDVGYRHVDTAYAYQVEEE----IGQAIQSXIXAGVVXREDLFVTTKLWCTCFRPELVXPALEXSLX 105 (324)
T ss_dssp SCHHHHHHHHHHHHHHTCCEEECCGGGTCHHH----HHHHHHHHHHTTSCCGGGCEEEEEECGGGCSHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHcCCCEEECcccccCHHH----HHHHHHHhhccCCcccceeEEEeeeCCccCCHHHHHHHHHHHHH
Confidence 5788999999999999987766 3454333 3444443211111 114667775321 11223 3455
Q ss_pred HcCCCeEEEec-CCCCHHHH-HHh----------hcCCCHHHHHHHHHHHHHcCCCcEEEEEEEecCCChhHHHHHHH
Q 015786 184 ESGLTSVNISL-DTLVPAKF-EFL----------TRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVE 249 (400)
Q Consensus 184 ~~g~~~i~iSl-dg~~~~~~-~~i----------r~~~~~~~v~~~i~~l~~~g~~~v~i~~~v~~~~n~~el~~l~~ 249 (400)
..|.++|-+=+ +.+++... +.. ...-.++.++++++.|++.|. |+.+=..+++.+++.++++
T Consensus 106 rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gk----ir~iGvSn~~~~~l~~~~~ 179 (324)
T 3ln3_A 106 XLQLDYVDLYIMHYPVPMXSGDNDFPVNEQGXSLLDTVDFCDTWERLEECXDAGL----VXSIGVSNFNHRQLERILN 179 (324)
T ss_dssp HHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCHHHHHHHHHHHHHTTS----EEEEEEESCCHHHHHHHHT
T ss_pred HhCCCcceEEEEecCccccccccccccccccccccccCCHHHHHHHHHHHHhcCC----eeEEEecCCcHHHHHHHHH
Confidence 66776665432 22211000 000 001237889999999999986 2322222355555655544
No 347
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=20.36 E-value=2.3e+02 Score=27.51 Aligned_cols=59 Identities=15% Similarity=0.173 Sum_probs=42.8
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEC-----------------------------CCccchhhHHHHHHHhhhcCCCc
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTG-----------------------------GEPTVRKDIEEACFHLSKLKGLK 164 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~G-----------------------------GEPll~~~l~~~i~~~~~~~g~~ 164 (400)
+..++.+.++++|+.+...+...+.++= |+.....++.++++++++. ||
T Consensus 168 R~f~~~~~ik~~id~ma~~KlN~lh~HltDdq~wriei~~~P~Lt~~ga~~~~~~~~~g~YT~~di~eiv~yA~~r-gI- 245 (512)
T 1jak_A 168 RHFFGVDEVKRYIDRVARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGGSTEVGGGPGGYYTKAEYKEIVRYAASR-HL- 245 (512)
T ss_dssp SSCCCHHHHHHHHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTSCCTTSSCCCCBCHHHHHHHHHHHHHT-TC-
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEEEeccCCCceehhhhhHHHHhhcCccccCCCCCCCCCHHHHHHHHHHHHHc-CC-
Confidence 5678999999999999988877776641 2334456799999999985 88
Q ss_pred eEE--EEecCcc
Q 015786 165 TLA--MTTNGLT 174 (400)
Q Consensus 165 ~~~--i~TNG~l 174 (400)
.|. |.+=|..
T Consensus 246 ~VIPEID~PGH~ 257 (512)
T 1jak_A 246 EVVPEIDMPGHT 257 (512)
T ss_dssp EEEEECCCSSSC
T ss_pred EEEEccCCCchH
Confidence 443 4455543
No 348
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=20.24 E-value=4.9e+02 Score=23.60 Aligned_cols=136 Identities=12% Similarity=0.052 Sum_probs=78.3
Q ss_pred CHHHHHHHHHHHHh-CCCCEEEEECCCccchhhHHHHHHHhhhcC--CCceEEEEecCcch-hh---hHHHHHHcCCCeE
Q 015786 118 SLNEILRLAYLFVT-SGVDKIRLTGGEPTVRKDIEEACFHLSKLK--GLKTLAMTTNGLTL-AR---KLPKLKESGLTSV 190 (400)
Q Consensus 118 s~e~i~~ii~~~~~-~g~~~i~~~GGEPll~~~l~~~i~~~~~~~--g~~~~~i~TNG~ll-~~---~~~~l~~~g~~~i 190 (400)
+.+++.+.+..+.+ .|...|.+..|.+-+.. ..+.++.+++.- ++ .+.+.-|+..- ++ .++.|.+.++.+|
T Consensus 142 ~~e~~~~~a~~~~~~~Gf~~iKik~g~~~~~~-~~e~v~avr~a~g~~~-~l~vDan~~~~~~~a~~~~~~l~~~~i~~i 219 (370)
T 1nu5_A 142 DTARDIDSALEMIETRRHNRFKVKLGARTPAQ-DLEHIRSIVKAVGDRA-SVRVDVNQGWDEQTASIWIPRLEEAGVELV 219 (370)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEECSSSCHHH-HHHHHHHHHHHHGGGC-EEEEECTTCCCHHHHHHHHHHHHHHTCCEE
T ss_pred CHHHHHHHHHHHHHhCCccEEEEecCCCChHH-HHHHHHHHHHhcCCCC-EEEEECCCCCCHHHHHHHHHHHHhcCcceE
Confidence 46777777777777 89999999877643332 245666665532 35 68899998653 32 2355667788877
Q ss_pred EEecCCCCHHHHHHhhcC--------CCHHHHHHHHHHHHHcCCCcEEEEEEEec-CCChhHHHHHHHHHHhCCCeE
Q 015786 191 NISLDTLVPAKFEFLTRR--------KGHEKVMESINAAIEVGYNPVKVNCVVMR-GFNDDEICDFVELTRDRPINI 258 (400)
Q Consensus 191 ~iSldg~~~~~~~~ir~~--------~~~~~v~~~i~~l~~~g~~~v~i~~~v~~-~~n~~el~~l~~~~~~~gv~~ 258 (400)
.=-+...+-+.+..++.. .+.. -.+.++.+.+.+.-. .++.-+.+ | ...+..++.++++..|+.+
T Consensus 220 EqP~~~~~~~~~~~l~~~~~ipIa~dE~~~-~~~~~~~~i~~~~~d-~v~ik~~~~G-Git~~~~i~~~A~~~g~~~ 293 (370)
T 1nu5_A 220 EQPVPRANFGALRRLTEQNGVAILADESLS-SLSSAFELARDHAVD-AFSLKLCNMG-GIANTLKVAAVAEAAGISS 293 (370)
T ss_dssp ECCSCTTCHHHHHHHHHHCSSEEEESTTCC-SHHHHHHHHHTTCCS-EEEECHHHHT-SHHHHHHHHHHHHHHTCEE
T ss_pred eCCCCcccHHHHHHHHHhCCCCEEeCCCCC-CHHHHHHHHHhCCCC-EEEEchhhcC-CHHHHHHHHHHHHHcCCcE
Confidence 644433334455555431 1111 123344444554301 12322222 2 4567788888888888865
No 349
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=20.20 E-value=2.3e+02 Score=26.68 Aligned_cols=78 Identities=8% Similarity=0.141 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEECCC------------------ccchhhHHHHHHHhhhcCCCceEEEEecCcch
Q 015786 114 PQLLSLNEILRLAYLFVTSGVDKIRLTGGE------------------PTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL 175 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~~~~g~~~i~~~GGE------------------Pll~~~l~~~i~~~~~~~g~~~~~i~TNG~ll 175 (400)
...++.+++..+++.+.+.|+..|.+++.- |-+.+--.+++..+++.-+- .+-|.-+|-..
T Consensus 277 ~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~-~iPIIg~GGI~ 355 (415)
T 3i65_A 277 APDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNK-QIPIIASGGIF 355 (415)
T ss_dssp CSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTT-CSCEEECSSCC
T ss_pred cCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCC-CCCEEEECCCC
Q ss_pred h-hhHHHHHHcCCCeEEE
Q 015786 176 A-RKLPKLKESGLTSVNI 192 (400)
Q Consensus 176 ~-~~~~~l~~~g~~~i~i 192 (400)
+ +.+.+++..|.+.|+|
T Consensus 356 s~eDa~e~l~aGAd~VqI 373 (415)
T 3i65_A 356 SGLDALEKIEAGASVCQL 373 (415)
T ss_dssp SHHHHHHHHHHTEEEEEE
T ss_pred CHHHHHHHHHcCCCEEEE
No 350
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=20.13 E-value=3.4e+02 Score=25.03 Aligned_cols=82 Identities=16% Similarity=0.226 Sum_probs=50.7
Q ss_pred CCCCCHHHHHHHHHHH-------HhCCCCEEEEECCC---------ccch-------------hh-HHHHHHHhhhcCCC
Q 015786 114 PQLLSLNEILRLAYLF-------VTSGVDKIRLTGGE---------PTVR-------------KD-IEEACFHLSKLKGL 163 (400)
Q Consensus 114 ~~~~s~e~i~~ii~~~-------~~~g~~~i~~~GGE---------Pll~-------------~~-l~~~i~~~~~~~g~ 163 (400)
.+.|+.++|..+++.+ .+.|...|.|.+|. |..+ .. +.++++.+++.-|-
T Consensus 154 p~~mt~~eI~~~i~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~ 233 (376)
T 1icp_A 154 PRRLTTDEIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGS 233 (376)
T ss_dssp CEECCTTTHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCG
T ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcC
Confidence 4568888888777655 35789999998865 5532 22 46788887764331
Q ss_pred c--eEEEEecCc--------ch---hhhHHHHHHcCCCeEEEecC
Q 015786 164 K--TLAMTTNGL--------TL---ARKLPKLKESGLTSVNISLD 195 (400)
Q Consensus 164 ~--~~~i~TNG~--------ll---~~~~~~l~~~g~~~i~iSld 195 (400)
. .+.+..+.. .+ .+.++.|.+.|++.|.+|--
T Consensus 234 ~~V~vrls~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~ 278 (376)
T 1icp_A 234 DRVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEP 278 (376)
T ss_dssp GGEEEEECTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECC
T ss_pred CceEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 1 333432211 11 12346667889999999854
No 351
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=20.10 E-value=1.6e+02 Score=27.29 Aligned_cols=35 Identities=11% Similarity=0.079 Sum_probs=20.2
Q ss_pred CCEEEEECCCcc-------chhhHHHHHHHhhhcCCCceEEEE
Q 015786 134 VDKIRLTGGEPT-------VRKDIEEACFHLSKLKGLKTLAMT 169 (400)
Q Consensus 134 ~~~i~~~GGEPl-------l~~~l~~~i~~~~~~~g~~~~~i~ 169 (400)
.-.|.|++.+.. ...++.++++.+.+. |+..+.+.
T Consensus 221 ~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~-Gvd~i~v~ 262 (362)
T 4ab4_A 221 RVGVHLAPRADAHDMGDADRAETFTYVARELGKR-GIAFICSR 262 (362)
T ss_dssp GEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHT-TCSEEEEE
T ss_pred ceEEEeeccccccccCCCCcHHHHHHHHHHHHHh-CCCEEEEC
Confidence 446777765431 123466777777774 77555553
No 352
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=20.07 E-value=3.7e+02 Score=22.10 Aligned_cols=76 Identities=9% Similarity=0.151 Sum_probs=44.0
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEE--CC--CccchhhHHHHHHHhhhcCCCc-eEEEEecCcchhhhHHHHHHcCCCeEEE
Q 015786 118 SLNEILRLAYLFVTSGVDKIRLT--GG--EPTVRKDIEEACFHLSKLKGLK-TLAMTTNGLTLARKLPKLKESGLTSVNI 192 (400)
Q Consensus 118 s~e~i~~ii~~~~~~g~~~i~~~--GG--EPll~~~l~~~i~~~~~~~g~~-~~~i~TNG~ll~~~~~~l~~~g~~~i~i 192 (400)
++..+.+.++.+.+.|...+.|- -| .+.+... .++++.+++..+.. .+.+-.|- ..+.++.+.+.|.+.|++
T Consensus 14 D~~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g-~~~i~~i~~~~~~~~~v~l~v~d--~~~~i~~~~~~gad~v~v 90 (220)
T 2fli_A 14 DYANFASELARIEETDAEYVHIDIMDGQFVPNISFG-ADVVASMRKHSKLVFDCHLMVVD--PERYVEAFAQAGADIMTI 90 (220)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBC-HHHHHHHHTTCCSEEEEEEESSS--GGGGHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeecCCCCCccccC-HHHHHHHHHhCCCCEEEEEeecC--HHHHHHHHHHcCCCEEEE
Confidence 34556666777777887765443 34 3544311 34555565532321 33333332 234578888999999999
Q ss_pred ecCC
Q 015786 193 SLDT 196 (400)
Q Consensus 193 Sldg 196 (400)
....
T Consensus 91 h~~~ 94 (220)
T 2fli_A 91 HTES 94 (220)
T ss_dssp EGGG
T ss_pred ccCc
Confidence 8765
Done!