Query 015787
Match_columns 400
No_of_seqs 158 out of 599
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 18:40:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015787.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015787hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1x6v_B Bifunctional 3'-phospho 100.0 3E-117 1E-121 942.3 37.0 342 54-399 225-568 (630)
2 1r6x_A ATP:sulfate adenylyltra 100.0 5E-116 2E-120 888.1 30.5 330 55-399 2-335 (395)
3 1g8f_A Sulfate adenylyltransfe 100.0 4E-112 1E-116 884.9 30.3 332 53-399 1-336 (511)
4 1m8p_A Sulfate adenylyltransfe 100.0 2E-107 6E-112 859.8 29.7 333 53-399 2-338 (573)
5 1jhd_A Sulfate adenylyltransfe 100.0 8E-105 3E-109 807.7 25.0 328 53-399 1-338 (396)
6 3cr8_A Sulfate adenylyltranfer 100.0 3E-105 9E-110 840.5 22.2 309 51-399 3-311 (552)
7 2gks_A Bifunctional SAT/APS ki 100.0 3E-103 1E-107 822.6 29.4 311 76-399 2-312 (546)
8 1v47_A ATP sulfurylase; produc 100.0 2.2E-98 8E-103 749.8 30.3 294 79-399 3-296 (349)
9 1od6_A PPAT, phosphopantethein 97.3 0.00091 3.1E-08 58.0 9.0 87 247-355 4-92 (160)
10 1qjc_A Phosphopantetheine aden 97.3 0.0022 7.5E-08 55.3 11.0 84 250-355 8-91 (158)
11 1ej2_A Nicotinamide mononucleo 96.8 0.0093 3.2E-07 53.2 11.0 98 246-355 6-107 (181)
12 1o6b_A Phosphopantetheine aden 96.5 0.017 5.9E-07 50.5 10.7 89 246-356 5-93 (169)
13 1k4m_A NAMN adenylyltransferas 96.4 0.013 4.4E-07 53.5 9.2 97 247-355 7-110 (213)
14 1kam_A Deamido-NAD(+), nicotin 95.8 0.049 1.7E-06 48.8 9.9 99 246-356 10-115 (194)
15 3f3m_A Phosphopantetheine aden 95.6 0.053 1.8E-06 48.5 9.4 88 245-354 4-92 (168)
16 2qtr_A Nicotinate (nicotinamid 95.4 0.018 6.1E-07 51.1 5.3 93 250-356 9-110 (189)
17 3k9w_A Phosphopantetheine aden 95.0 0.13 4.4E-06 46.9 10.0 89 244-354 23-111 (187)
18 2b7l_A Glycerol-3-phosphate cy 94.9 0.13 4.3E-06 43.1 9.1 90 245-357 3-97 (132)
19 1vlh_A Phosphopantetheine aden 94.9 0.14 5E-06 45.4 9.7 80 251-352 20-99 (173)
20 4f3r_A Phosphopantetheine aden 94.8 0.091 3.1E-06 46.7 8.2 86 246-354 7-93 (162)
21 2x0k_A Riboflavin biosynthesis 94.8 0.042 1.4E-06 54.4 6.7 129 245-395 17-156 (338)
22 3nd5_A Phosphopantetheine aden 94.8 0.13 4.4E-06 46.1 9.3 82 251-354 10-92 (171)
23 1f9a_A Hypothetical protein MJ 94.5 0.13 4.3E-06 45.2 8.3 89 251-354 8-100 (168)
24 2qjt_B Nicotinamide-nucleotide 94.2 0.16 5.6E-06 48.7 9.2 99 246-355 9-117 (352)
25 3nbk_A Phosphopantetheine aden 93.8 0.38 1.3E-05 43.5 10.2 81 250-352 28-108 (177)
26 3nv7_A Phosphopantetheine aden 93.8 0.2 6.9E-06 44.3 8.1 81 251-353 10-90 (157)
27 1yum_A 'probable nicotinate-nu 93.3 0.37 1.3E-05 45.1 9.6 99 245-354 24-129 (242)
28 1coz_A Protein (glycerol-3-pho 93.1 0.44 1.5E-05 39.4 8.8 88 246-356 4-96 (129)
29 3gmi_A UPF0348 protein MJ0951; 93.0 0.25 8.6E-06 49.4 8.3 95 243-353 52-151 (357)
30 3glv_A Lipopolysaccharide core 92.5 0.52 1.8E-05 40.3 8.7 88 244-355 3-95 (143)
31 1lw7_A Transcriptional regulat 92.1 0.62 2.1E-05 45.3 9.8 92 246-348 4-113 (365)
32 1mrz_A Riboflavin kinase/FMN a 90.7 0.57 1.9E-05 45.4 7.7 96 246-356 2-103 (293)
33 3h05_A Uncharacterized protein 88.8 0.45 1.5E-05 42.6 4.9 116 245-380 3-126 (177)
34 2qjo_A Bifunctional NMN adenyl 87.0 0.53 1.8E-05 44.8 4.5 96 248-356 12-116 (341)
35 3do8_A Phosphopantetheine aden 85.2 0.96 3.3E-05 39.4 4.9 70 251-332 8-82 (148)
36 3op1_A Macrolide-efflux protei 84.5 1.3 4.3E-05 43.4 5.9 101 244-356 21-133 (308)
37 1nup_A FKSG76; NAD biosynthesi 82.3 3.8 0.00013 38.2 8.0 59 251-309 14-74 (252)
38 3n8h_A Pantothenate synthetase 82.2 1 3.4E-05 43.4 4.0 40 227-266 6-46 (264)
39 2h29_A Probable nicotinate-nuc 80.9 4 0.00014 36.0 7.2 54 250-308 9-65 (189)
40 1kqn_A Nmnat, nicotinamide mon 75.6 6.4 0.00022 37.5 7.4 76 251-332 16-93 (279)
41 3elb_A Ethanolamine-phosphate 72.9 14 0.00048 36.5 9.3 91 244-357 8-103 (341)
42 3uk2_A Pantothenate synthetase 69.2 1.5 5.1E-05 42.6 1.3 60 228-295 8-69 (283)
43 2ejc_A Pantoate--beta-alanine 58.5 20 0.00068 34.5 7.0 38 228-266 4-44 (280)
44 3v67_A Sensor protein CPXA; PA 53.6 5.2 0.00018 34.7 1.8 57 151-216 54-112 (138)
45 3inn_A Pantothenate synthetase 50.2 21 0.00072 35.1 5.6 39 228-266 25-65 (314)
46 3ag6_A Pantothenate synthetase 49.5 35 0.0012 32.9 7.0 37 228-266 5-45 (283)
47 3elb_A Ethanolamine-phosphate 45.5 31 0.0011 34.0 6.2 85 251-358 206-299 (341)
48 3q12_A Pantoate--beta-alanine 44.2 27 0.00093 33.8 5.3 56 228-290 7-64 (287)
49 3hl4_A Choline-phosphate cytid 41.6 16 0.00055 34.5 3.2 107 228-355 61-172 (236)
50 1v8f_A Pantoate-beta-alanine l 38.5 29 0.001 33.3 4.5 36 228-267 4-40 (276)
51 3mxt_A Pantothenate synthetase 37.5 34 0.0012 33.2 4.8 63 228-295 7-71 (285)
52 1xvq_A Thiol peroxidase; thior 32.8 82 0.0028 26.4 6.1 57 134-190 100-168 (175)
53 3gl3_A Putative thiol:disulfid 27.2 1.1E+02 0.0039 24.1 5.8 62 134-195 86-150 (152)
54 1n8j_A AHPC, alkyl hydroperoxi 24.3 1.5E+02 0.0051 25.2 6.4 38 134-171 92-137 (186)
55 3jtf_A Magnesium and cobalt ef 22.8 43 0.0015 26.5 2.3 23 152-174 99-121 (129)
56 2ki8_A Tungsten formylmethanof 22.1 1.1E+02 0.0036 26.1 4.8 31 139-169 55-87 (146)
57 3ctu_A CBS domain protein; str 21.5 75 0.0026 25.7 3.6 30 146-175 109-138 (156)
58 4g2e_A Peroxiredoxin; redox pr 20.9 1.7E+02 0.0058 24.1 5.8 41 134-174 88-141 (157)
59 4gqo_A LMO0859 protein; virule 20.6 1.3E+02 0.0045 28.5 5.7 67 77-149 82-161 (433)
No 1
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=100.00 E-value=3.1e-117 Score=942.29 Aligned_cols=342 Identities=59% Similarity=1.018 Sum_probs=328.3
Q ss_pred cCCCCcc--eeecccCchhHHHHHHHhccCCeEeeChhhHHHHHHHhcCCcCCCCCCCChhhhhcccccCCeecCCCCee
Q 015787 54 IEPDGGK--LTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVV 131 (400)
Q Consensus 54 i~PhGg~--lv~l~v~~~~~~~l~~ea~~lp~i~l~~~~l~dLelL~~G~fSPL~GFM~e~dy~sVl~~~~mrL~dG~~~ 131 (400)
+-||||+ |++|+|+++++++++++|++||+|.||++++||||||++||||||+||||++||+||+ ++|||+||..+
T Consensus 225 ~ip~G~~~~l~~l~v~~~~~~~~~~~a~~l~~i~l~~~~~~dlell~~G~fsPL~GfM~~~dy~~v~--~~~~l~~g~~~ 302 (630)
T 1x6v_B 225 IVPVDASYEVKELYVPENKLHLAKTDAETLPALKINKVDMQWVQVLAEGWATPLNGFMREREYLQCL--HFDCLLDGGVI 302 (630)
T ss_dssp SSCCCCCCSCCCCBCCGGGHHHHHHHHHTSCEEECCHHHHHHHHHHHHTTTTTCCSSCCHHHHHHHH--HHSEECTTSCE
T ss_pred cccccCcccceecccChHHHHHHHHhhccCCEEEECHHHHHHHHHHhcCCccCchhhCCHHHHHHHH--HhCEeCCCCee
Confidence 4699966 9999999999999999999999999999999999999999999999999999999999 69999997523
Q ss_pred ecceeEEEecCHHHHHhcCCCCeEEEEcCCCcEEEEEEeCccccCCHHHHHHHhhCCCCCCChhHHHHHHhcCCEEEeee
Q 015787 132 NMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGD 211 (400)
Q Consensus 132 pwpiPI~L~v~~e~a~~l~~G~~vaL~d~eG~~vAiL~V~eif~~dk~~ea~~vfGT~d~~HPgV~~~~~~~g~~~vgG~ 211 (400)
+|||||||+|+++++++|++|++|+| +.+|+++|+|+|+|+|++||++||++||||+|++||||++++ ++|+|+|||+
T Consensus 303 ~~~iPi~L~v~~~~~~~l~~g~~v~L-~~~g~~~a~l~v~e~~~~dk~~~a~~v~gt~d~~HPgv~~~~-~~g~~~vgG~ 380 (630)
T 1x6v_B 303 NLSVPIVLTATHEDKERLDGCTAFAL-MYEGRRVAILRNPEFFEHRKEERCARQWGTTCKNHPYIKMVM-EQGDWLIGGD 380 (630)
T ss_dssp ECCSCCCEEECHHHHHHHTTCSEEEE-EETTEEEEEEEEEEEEECCHHHHHHHHHSCCCTTSHHHHHHH-HSCSEEEEEE
T ss_pred eeeeEEEEeCCHHHHhhCCCCCEEEE-ccCCeEEEEEEeeEEEecCHHHHHHHHhCCCCCCCcchHHHH-hCCCEEEEeE
Confidence 47999999999999999999999999 569999999999999999999999999999999999999876 5699999999
Q ss_pred EEEeccCCCCCCCCcccCCHHHHHHHHHhcCCCceEEeeeCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCC
Q 015787 212 LEVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKA 291 (400)
Q Consensus 212 v~~l~~~~~~~~f~~~r~tP~e~R~~f~~~gw~~VvAfQtRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG~tK~ 291 (400)
|++++++.|+|+|++||+||+|+|+.|+++||++|||||||||+|||||+|||.|++.+.+.||++++||||||+|+||+
T Consensus 381 i~~l~~~~~~~~~~~~~~tP~e~r~~f~~~gw~~VvafqtrNP~HraHe~l~~~a~~~~~d~g~~~~~lll~pl~G~tk~ 460 (630)
T 1x6v_B 381 LQVLDRVYWNDGLDQYRLTPTELKQKFKDMNADAVSAFQLRNPVHNGHALLMQDTHKQLLERGYRRPVLLLHPLGGWTKD 460 (630)
T ss_dssp EEECSCCCCCSSCGGGCCCHHHHHHHHHHTTCSEEEEEEESSCCCHHHHHHHHHHHHHHHHHTCSSEEEEEEEBCSCCCT
T ss_pred EEEEecCcccccchhhcCCHHHHHHHHHHcCCCeEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCcEEEEeCcCCCCC
Confidence 99999999988999999999999999999999999999999999999999999988777788899999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCCcEEEEeCCCCCCCCChhHHHHHHHHHHhcCCcEEEecCCCCCCCCCCCCCCCCCCc
Q 015787 292 DDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPVEKRDLYDAD 371 (400)
Q Consensus 292 dDi~~~~R~r~ye~ll~~~y~p~~~~~l~~lp~~mryAGPREallHAiiRkNyGcThfIVGRDHAGvG~~~~~~~~Yd~~ 371 (400)
||||+++||+||++++++||||+++++|++||++||||||||||||||+|||||||||||||||||||+++++.+|||+|
T Consensus 461 ~di~~~~r~~~~~~~~~~~y~p~~~~~l~~~p~~mryaGPrEa~~hai~rkN~Gcth~IVGrdhAG~g~~~~~~~~Y~~~ 540 (630)
T 1x6v_B 461 DDVPLMWRMKQHAAVLEEGVLNPETTVVAIFPSPMMYAGPTEVQWHCRARMVAGANFYIVGRDPAGMPHPETGKDLYEPS 540 (630)
T ss_dssp TSCCHHHHHHHHHHHHHTTSSCGGGEEECCBCCCCCCCHHHHHHHHHHHHHHTTCSEEEECSSTTCCBCTTTCSBSSCTT
T ss_pred CCCCHHHHHHHHHHHHHcCCCCCcceEEeeccchhhhcCcHHHHHHHHHHHhCCCCeEEECCCCCCCCCCCCccccCCcc
Confidence 99999999999999999789999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHhhhCCCCCcceEEEeeeeeccCC
Q 015787 372 HGKKVLSMAPGLERLNILPFKVCKASDH 399 (400)
Q Consensus 372 ~aq~i~~~~~~l~~i~I~p~~~~vYc~~ 399 (400)
+||+||++++++.+|+|++|++++||.+
T Consensus 541 ~aq~i~~~~~~~l~i~~~~~~~~~Y~~~ 568 (630)
T 1x6v_B 541 HGAKVLTMAPGLITLEIVPFRVAAYNKK 568 (630)
T ss_dssp HHHHHHHHCTTCTTCEEEECCCEEEETT
T ss_pred hHHHHHhcCcccCCceEEEcceeEEEcc
Confidence 9999999888777999999999999986
No 2
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=100.00 E-value=5.1e-116 Score=888.14 Aligned_cols=330 Identities=31% Similarity=0.515 Sum_probs=312.6
Q ss_pred CCCCcceeecccCchh-HHHHHHHhcc--CCeEeeChhhHHHHHHHhcCCcCCCCCCCChhhhhcccccCCeecCCCCee
Q 015787 55 EPDGGKLTELIVDKSL-RDVRKREAAT--LPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVV 131 (400)
Q Consensus 55 ~PhGg~lv~l~v~~~~-~~~l~~ea~~--lp~i~l~~~~l~dLelL~~G~fSPL~GFM~e~dy~sVl~~~~mrL~dG~~~ 131 (400)
.||||+|+||+|++++ +++++++|++ ||+|.||++++||||||++||||||+||||++||+||+ ++|||+||++
T Consensus 2 ~phgg~l~~l~v~~~~~~~~~~~~a~~~~lp~i~l~~~~l~dlell~~G~fsPL~GFM~~~dy~~V~--~~~rL~dG~~- 78 (395)
T 1r6x_A 2 APHGGILQDLIARDALKKNELLSEAQSSDILVWNLTPRQLCDIELILNGGFSPLTGFLNENDYSSVV--TDSRLADGTL- 78 (395)
T ss_dssp CCTTSSCCBHHHHTGGGHHHHHHHHTCTTSEEEECCHHHHHHHHHHHBTTTTTCCEECCHHHHHHHH--HHSBCTTSCB-
T ss_pred cCCCccccccccCchHHhHHHHHHhhcCCCCeEEcCHHHHHHHHHHhcCCccCCcccCCHHHHHHHH--HhCcCCCCCC-
Confidence 5999999999998654 5669999999 99999999999999999999999999999999999999 6999999987
Q ss_pred ecceeEEEecCHHHHHhcCCCCeEEEEcCCCcEEEEEEeCccccCCHHHHHHHhhCCCCCCChhHHHHHHhcCCEEEeee
Q 015787 132 NMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGD 211 (400)
Q Consensus 132 pwpiPI~L~v~~e~a~~l~~G~~vaL~d~eG~~vAiL~V~eif~~dk~~ea~~vfGT~d~~HPgV~~~~~~~g~~~vgG~ 211 (400)
|||||||+|+++++++|++|++|+|+|.+|+++|+|+|+|+|++||++||++||| +|++||||++++.+.|+|+|||+
T Consensus 79 -wpiPI~L~v~~e~~~~l~~g~~vaL~~~~g~~~ail~v~e~y~~dk~~~a~~vfg-~d~~HPgV~~~~~~~g~~~vgG~ 156 (395)
T 1r6x_A 79 -WTIPITLDVDEAFANQIKPDTRIALFQDDEIPIAILTVQDVYKPNKTIEAEKVFR-GDPEHPAISYLFNVAGDYYVGGS 156 (395)
T ss_dssp -CCSCCCEEECHHHHHTCCTTCEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHC-SCTTSHHHHHHHHTSCSEEEEEE
T ss_pred -cceEEEEeCCHHHHhhcCCCCEEEEEcCCCceEEEEEeeeeeccChHHHHHHHhC-CCcCCccHHHHHhhcCCEEEEEE
Confidence 6999999999999999999999999988999999999999999999999999999 99999999997755699999999
Q ss_pred EEEeccCCCCCCCCcccCCHHHHHHHHHhcCCCceEEeeeCCCCchhH-HHHHHHHHHHHHHhcCCCCcEEEecccCCCC
Q 015787 212 LEVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFAFQLRNPVHNGH-ALLMTDTRRRLLEMGYQNPILLLHPLGGYTK 290 (400)
Q Consensus 212 v~~l~~~~~~~~f~~~r~tP~e~R~~f~~~gw~~VvAfQtRNPlHRaH-e~l~r~~~~~ale~~~~~~~Lll~PlvG~tK 290 (400)
|++++++.|+ +|++||+||+|+|+.|+++||++|||||||||+|||| |+++| +|+|. +++||||||+|+||
T Consensus 157 v~~l~~~~~~-df~~~r~tP~e~R~~f~~~gw~~VvafqtrNP~HraH~e~~~r----~a~e~---~~~lllhPlvG~tK 228 (395)
T 1r6x_A 157 LEAIQLPQHY-DYPGLRKTPAQLRLEFQSRQWDRVVAFQTRNPMHRAHRELTVR----AAREA---NAKVLIHPVVGLTK 228 (395)
T ss_dssp EEESCCCCCC-SSTTCSCCHHHHHHHHHHTTCCCEEEECCSSCCCHHHHHHHHH----HHHHT---TCEEEECCBCSBCC
T ss_pred EEEEecCCcC-CchhhcCCHHHHHHHHHhcCCCcEEEeccCCCcchhhHHHHHH----HHHHc---CCcEEEEECCCCCC
Confidence 9999998887 6999999999999999999999999999999999999 66665 56776 48999999999999
Q ss_pred CCCCChHHHHHHHHHHHHcCCCCCCcEEEEeCCCCCCCCChhHHHHHHHHHHhcCCcEEEecCCCCCCCCCCCCCCCCCC
Q 015787 291 ADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPVEKRDLYDA 370 (400)
Q Consensus 291 ~dDi~~~~R~r~ye~ll~~~y~p~~~~~l~~lp~~mryAGPREallHAiiRkNyGcThfIVGRDHAGvG~~~~~~~~Yd~ 370 (400)
+||+|+++||+||+++++ +| |+++++|++||++||||||||||||||+|||||||||||||||||||+++++.+||++
T Consensus 229 ~~Dip~~vR~~~~~~~l~-~y-p~~~v~l~~~p~~mryAGPrEai~HAiiRkN~GcthfIVGRDhAG~g~~~~~~d~Y~~ 306 (395)
T 1r6x_A 229 PGDIDHHTRVRVYQEIIK-RY-PNGIAFLSLLPLAMRMSGDREAVWHAIIRKNYGASHFIVGRDHAGPGKNSKGVDFYGP 306 (395)
T ss_dssp TTCCCHHHHHHHHHHHGG-GS-STTCEEECCBCCBCCCCHHHHHHHHHHHHHHTTCSEEEECTTTTCCCBCTTSCBSSCT
T ss_pred CCCCCHHHHHHHHHHHHH-hC-CCccEEEEecchhhhhcCcHHHHHHHHHHHHcCCceEEECCCCCCCCCCCcccccCCc
Confidence 999999999999999998 45 9999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhHhhhCCCCCcceEEEeeeeeccCC
Q 015787 371 DHGKKVLSMAPGLERLNILPFKVCKASDH 399 (400)
Q Consensus 371 ~~aq~i~~~~~~l~~i~I~p~~~~vYc~~ 399 (400)
|+||+||++++++.+|+|++|++++||.+
T Consensus 307 ~~aq~i~~~~~~el~I~~v~f~~~~Y~~~ 335 (395)
T 1r6x_A 307 YDAQELVESYKHELDIEVVPFRMVTYLPD 335 (395)
T ss_dssp THHHHHHHHHHHHHTCEEEECCCEEEEGG
T ss_pred chHHHHHHhchhccCceEEEecceEEecc
Confidence 99999999995556899999999999974
No 3
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=100.00 E-value=4.3e-112 Score=884.91 Aligned_cols=332 Identities=31% Similarity=0.514 Sum_probs=313.3
Q ss_pred ccCCCCcceeecccCchh-HHHHHHHhcc--CCeEeeChhhHHHHHHHhcCCcCCCCCCCChhhhhcccccCCeecCCCC
Q 015787 53 LIEPDGGKLTELIVDKSL-RDVRKREAAT--LPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGS 129 (400)
Q Consensus 53 li~PhGg~lv~l~v~~~~-~~~l~~ea~~--lp~i~l~~~~l~dLelL~~G~fSPL~GFM~e~dy~sVl~~~~mrL~dG~ 129 (400)
|+.||||+|+||++++++ +++++++|++ ||+|.||++++||||||++||||||+||||++||+||+ ++|||+||+
T Consensus 1 ~~~phgg~l~~~~~~~~~~~~~~~~~a~~~~lp~i~l~~~~~~dlell~~G~fsPL~GfM~~~d~~~v~--~~~rl~~G~ 78 (511)
T 1g8f_A 1 MPAPHGGILQDLIARDALKKNELLSEAQSSDILVWNLTPRQLCDIELILNGGFSPLTGFLNENDYSSVV--TDSRLADGT 78 (511)
T ss_dssp -CCCTTSSCCCHHHHTGGGHHHHHHHHTCTTSEEEECCHHHHHHHHHHHTTTTTTCCEECCHHHHHHHH--HHSBCTTCC
T ss_pred CCCCCCCeeeccccCchhhhHHHHHHhhcCCCCeEEcCHHHHHHHHHHhcCCccCccccCCHHHHHHHH--HhCcCCCCC
Confidence 568999999999987654 5669999999 99999999999999999999999999999999999999 699999998
Q ss_pred eeecceeEEEecCHHHHHhcCCCCeEEEEcCCCcEEEEEEeCccccCCHHHHHHHhhCCCCCCChhHHHHHHhcCCEEEe
Q 015787 130 VVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIG 209 (400)
Q Consensus 130 ~~pwpiPI~L~v~~e~a~~l~~G~~vaL~d~eG~~vAiL~V~eif~~dk~~ea~~vfGT~d~~HPgV~~~~~~~g~~~vg 209 (400)
+ |||||||+|++|++++|++|++|+|+|.+|+++|+|+|+|+|++||++||++||| +|++||||++++.+.|+|+||
T Consensus 79 ~--w~iPi~L~v~~~~~~~l~~g~~v~L~~~~g~~~a~l~v~e~~~~dk~~~~~~v~g-~d~~HPgv~~~~~~~g~~~v~ 155 (511)
T 1g8f_A 79 L--WTIPITLDVDEAFANQIKPDTRIALFQDDEIPIAILTVQDVYKPNKTIEAERVFR-GDPEHPAISYLFNVAGDYYVG 155 (511)
T ss_dssp B--CCSCCCEEECHHHHTTCCTTCEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHC-SCTTSHHHHHHHHTSCSEEEE
T ss_pred C--cceeEEEeCCHHHHhhccCCCEEEEECCCCceEEEEEeeeeeccChHHHHHHHhC-CCcCCccHHHHHhhCCCEEEE
Confidence 7 6999999999999999999999999988999999999999999999999999999 999999999977555999999
Q ss_pred eeEEEeccCCCCCCCCcccCCHHHHHHHHHhcCCCceEEeeeCCCCchhH-HHHHHHHHHHHHHhcCCCCcEEEecccCC
Q 015787 210 GDLEVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFAFQLRNPVHNGH-ALLMTDTRRRLLEMGYQNPILLLHPLGGY 288 (400)
Q Consensus 210 G~v~~l~~~~~~~~f~~~r~tP~e~R~~f~~~gw~~VvAfQtRNPlHRaH-e~l~r~~~~~ale~~~~~~~Lll~PlvG~ 288 (400)
|+|+++++|.|+ +|++||+||+|+|+.|+++||++|+|||||||+|||| |+++| +|+|. +++||||||+|+
T Consensus 156 G~v~~l~~~~~~-~~~~~~~tP~e~r~~f~~~gw~~v~afqtrnP~HraH~e~~~~----~a~e~---~~~lll~pl~g~ 227 (511)
T 1g8f_A 156 GSLEAIQLPQHY-DYPGLRKTPAQLRLEFQSRQWDRVVAFQTRNPMHRAHRELTVR----AAREA---NAKVLIHPVVGL 227 (511)
T ss_dssp EEEEESCCCCCC-SCTTTCCCHHHHHHHHHHTTCCCEEEEEESSCCCHHHHHHHHH----HHHHH---TCEEEEEEBCSB
T ss_pred EEEEEEecCCcC-CchhhcCCHHHHHHHHHHcCCCcEEEEecCCCCchHHHHHHHH----HHHHc---CCcEEEEECCCC
Confidence 999999998887 6999999999999999999999999999999999999 67765 56676 489999999999
Q ss_pred CCCCCCChHHHHHHHHHHHHcCCCCCCcEEEEeCCCCCCCCChhHHHHHHHHHHhcCCcEEEecCCCCCCCCCCCCCCCC
Q 015787 289 TKADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPVEKRDLY 368 (400)
Q Consensus 289 tK~dDi~~~~R~r~ye~ll~~~y~p~~~~~l~~lp~~mryAGPREallHAiiRkNyGcThfIVGRDHAGvG~~~~~~~~Y 368 (400)
||+||+|+++||+||+++++ +| |+++++|+++|++|||||||||+||||+|||||||||||||||||||+++++.+||
T Consensus 228 ~k~~di~~~~r~~~~~~~~~-~y-p~~~~~l~~~p~~m~yaGprea~~hai~r~n~G~th~IvGrdhAg~g~~~~~~~~Y 305 (511)
T 1g8f_A 228 TKPGDIDHHTRVRVYQEIIK-RY-PNGIAFLSLLPLAMRMSGDREAVWHAIIRKNYGASHFIVGRDHAGPGKNSKGVDFY 305 (511)
T ss_dssp CSTTCCCHHHHHHHHHHHGG-GS-CTTSEEECCBCCBCCCCHHHHHHHHHHHHHHTTCSEEECCTTTTCCCBCTTSCBSS
T ss_pred CCCCCCCHHHHHHHHHHHHH-hC-CcccEEEEecchhhhccCcHHHHHHHHHHHhCCCceEEeCCCCCCCCCCCcccccC
Confidence 99999999999999999998 45 99999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhHhhhCCCCCcceEEEeeeeeccCC
Q 015787 369 DADHGKKVLSMAPGLERLNILPFKVCKASDH 399 (400)
Q Consensus 369 d~~~aq~i~~~~~~l~~i~I~p~~~~vYc~~ 399 (400)
++|+||+||++++++.+|++++|..++||.+
T Consensus 306 ~~~~aq~i~~~~~~~l~i~pv~fd~~~y~~~ 336 (511)
T 1g8f_A 306 GPYDAQELVESYKHELDIEVVPFRMVTYLPD 336 (511)
T ss_dssp CTTHHHHHHHHTHHHHCSEEECCCCEEEEGG
T ss_pred CcchHHHHHHhCccccCceEEeecceeEecc
Confidence 9999999999996555899999999999964
No 4
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=100.00 E-value=1.7e-107 Score=859.77 Aligned_cols=333 Identities=29% Similarity=0.451 Sum_probs=316.7
Q ss_pred ccCCCCcceeecccCc-hhHHHHHHHhccCCeEeeChhhHHHHHHHhcCCcCCCCCCCChhhhhcccccCCeecCCCCee
Q 015787 53 LIEPDGGKLTELIVDK-SLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVV 131 (400)
Q Consensus 53 li~PhGg~lv~l~v~~-~~~~~l~~ea~~lp~i~l~~~~l~dLelL~~G~fSPL~GFM~e~dy~sVl~~~~mrL~dG~~~ 131 (400)
|+.||||+|++|+|++ +++++++++|++||+|.||++++||||||++||||||+||||++||+||+ ++|||+||++
T Consensus 2 ~~~phgg~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dl~~l~~G~~sPl~gfm~~~d~~~v~--~~~~l~~g~~- 78 (573)
T 1m8p_A 2 ANAPHGGVLKDLLARDAPRQAELAAEAESLPAVTLTERQLCDLELIMNGGFSPLEGFMNQADYDRVC--EDNRLADGNV- 78 (573)
T ss_dssp CSCCSTTSCCCHHHHTSTTHHHHHHHHTTSCEEEECHHHHHHHHHHHTSTTTTCCEECCHHHHHHHH--HHSBCTTSCB-
T ss_pred CCCCCCCcccccccCchHHHHHHHHHhccCCeEEeCHHHHHHHHHHhcCCcCCCcccCCHHHHHHHH--HhCcCCCCCC-
Confidence 6789999999999988 89999999999999999999999999999999999999999999999999 6999999987
Q ss_pred ecceeEEEecCHHHHHhc--CCCCeEEEEc-CCCcEEEEEEeCccccCCHHHHHHHhhCCCCCCChhHHHHHHhcCCEEE
Q 015787 132 NMSVPIVLAIDDEQKRRI--GESTRVALVD-SDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLI 208 (400)
Q Consensus 132 pwpiPI~L~v~~e~a~~l--~~G~~vaL~d-~eG~~vAiL~V~eif~~dk~~ea~~vfGT~d~~HPgV~~~~~~~g~~~v 208 (400)
|||||||+|+++++++| ++|++|+|+| ++|+++|+|+|+|+|++||++||++||| +|++||||++++.+.|+|+|
T Consensus 79 -~~~Pi~l~v~~~~~~~l~~~~g~~v~L~~~~~g~~~a~l~v~e~~~~dk~~~~~~v~g-~~~~hP~v~~~~~~~g~~~v 156 (573)
T 1m8p_A 79 -FSMPITLDASQEVIDEKKLQAASRITLRDFRDDRNLAILTIDDIYRPDKTKEAKLVFG-GDPEHPAIVYLNNTVKEFYI 156 (573)
T ss_dssp -CCSCCCCEECHHHHHHTTCCTTCEEEEEETTTTEEEEEEEESCCCCCCHHHHHHHTSC-CCSSTHHHHHHHHTSCSEEC
T ss_pred -cceeEEEeCCHHHHHhhccCCCCEEEEEecCCCeEEEEEEeeeeecCCHHHHHHHHhC-CCCCCccHHHHHhccCCEEE
Confidence 69999999999999999 9999999998 8999999999999999999999999999 99999999998755599999
Q ss_pred eeeEEEeccCCCCCCCCcccCCHHHHHHHHHhcCCCceEEeeeCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccCC
Q 015787 209 GGDLEVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGY 288 (400)
Q Consensus 209 gG~v~~l~~~~~~~~f~~~r~tP~e~R~~f~~~gw~~VvAfQtRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG~ 288 (400)
||+|+++++|.|+ +|++||+||+|+|+.|+++||++|+|||||||+|||||+|++. +|.+. +++||||||+|+
T Consensus 157 ~G~~~~l~~~~~~-~~~~~~~tp~e~r~~~~~~gw~~v~afqtrnP~Hr~H~~l~~~---a~~~~---~~~llv~pl~g~ 229 (573)
T 1m8p_A 157 GGKIEAVNKLNHY-DYVALRYTPAELRVHFDKLGWSRVVAFQTRNPMHRAHRELTVR---AARSR---QANVLIHPVVGL 229 (573)
T ss_dssp CEEEEECCCCCCC-SCGGGBCCHHHHHHHHHHTTCCSEEEECCSSCCCHHHHHHHHH---HHHHT---TCEEEECCBCCC
T ss_pred EEEEEEEecCCcc-CcHhhcCCHHHHHHHHHHcCCCeEEEEeeCCCcchhhHHHHHH---HHHhc---CCcEEEEeCCCC
Confidence 9999999998887 6999999999999999999999999999999999999999874 34454 489999999999
Q ss_pred CCCCCCChHHHHHHHHHHHHcCCCCCCcEEEEeCCCCCCCCChhHHHHHHHHHHhcCCcEEEecCCCCCCCCCCCCCCCC
Q 015787 289 TKADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPVEKRDLY 368 (400)
Q Consensus 289 tK~dDi~~~~R~r~ye~ll~~~y~p~~~~~l~~lp~~mryAGPREallHAiiRkNyGcThfIVGRDHAGvG~~~~~~~~Y 368 (400)
||+||+|+++|++||+++++ +| |+++++++++|++|||||||||+||||||||||||||||||||||||++.++.+||
T Consensus 230 ~k~~di~~~~R~~~~~~~~~-~~-p~~~v~l~~~p~~m~~agprea~~ha~ir~n~G~th~ivgrdhag~g~~~~~~~~Y 307 (573)
T 1m8p_A 230 TKPGDIDHFTRVRAYQALLP-RY-PNGMAVLGLLGLAMRMGGPREAIWHAIIRKNHGATHFIVGRDHAGPGSNSKGEDFY 307 (573)
T ss_dssp CCTTCHHHHHHHHHHHHHGG-GS-STTSEEECBBCCCCCCCHHHHHHHHHHHHHHHTCSEEEECTTTTCCCCCTTCCCSS
T ss_pred CCCCCCCHHHHHHHHHHHHH-hC-CCCcEEEEecCchhhccCchHHHHHHHHHHHCCCCeEEECCCCCCCCCCCCCcccC
Confidence 99999999999999999998 45 99999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhHhhhCCCCCcceEEEeeeeeccCC
Q 015787 369 DADHGKKVLSMAPGLERLNILPFKVCKASDH 399 (400)
Q Consensus 369 d~~~aq~i~~~~~~l~~i~I~p~~~~vYc~~ 399 (400)
++|+||+||+++++..+|++++|..++||.+
T Consensus 308 ~~~~a~~i~~~~~~~l~i~~v~fd~~~y~~~ 338 (573)
T 1m8p_A 308 GPYDAQHAVEKYKDELGIEVVEFQMVTYLPD 338 (573)
T ss_dssp CTTHHHHHHHHHHHHHCCEEEECCCCCBBTT
T ss_pred CcchHHHHHHhhhhhcCceeEeccceEEEcC
Confidence 9999999999986555899999999999975
No 5
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=100.00 E-value=7.6e-105 Score=807.69 Aligned_cols=328 Identities=26% Similarity=0.381 Sum_probs=310.1
Q ss_pred ccCCCCcceeeccc--CchhHHHHHHHhccCCeEeeChhhHHHHHHHhcCCcCCCCCCCChhhhhcccccCCeecCCCCe
Q 015787 53 LIEPDGGKLTELIV--DKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSV 130 (400)
Q Consensus 53 li~PhGg~lv~l~v--~~~~~~~l~~ea~~lp~i~l~~~~l~dLelL~~G~fSPL~GFM~e~dy~sVl~~~~mrL~dG~~ 130 (400)
++.||||+|+||+| +++++++++++|++||+|.||++++||||||++||||||+||||++||+||+ ++|||+||++
T Consensus 1 ~~~phgg~l~~~~~~~~~~~~~~~~~~a~~lp~i~l~~~~~~dlell~~G~fsPL~GFM~~~d~~~v~--~~~rl~~G~~ 78 (396)
T 1jhd_A 1 MIKPVGSDELKPLFVYDPEEHHKLSHEAESLPSVVISSQAAGNAVMMGAGYFSPLQGFMNVADAMGAA--EKMTLSDGSF 78 (396)
T ss_dssp CCCCTTSSSCCCCBCCSHHHHHHHHHHHTTSCEEECCHHHHHHHHHHHTTTTTTCCEECCHHHHHHHH--HHSBCTTSCB
T ss_pred CCCCCCCeeeccccCCChHHHHHHHHHhccCCeEecCHHHHHHHHHHhcCCccCCcccCCHHHHHHHH--HhCcCCCCCC
Confidence 46899999999999 9999999999999999999999999999999999999999999999999999 6999999998
Q ss_pred eecceeEEEecCHHHHHhcCCCCeEEEEcCCCcEEEEEEeCccccCCHHHHHH------HhhCCCCCCChhHHHHHHhcC
Q 015787 131 VNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIA------RTWGTTAPGLPYVDQAITYAG 204 (400)
Q Consensus 131 ~pwpiPI~L~v~~e~a~~l~~G~~vaL~d~eG~~vAiL~V~eif~~dk~~ea~------~vfGT~d~~HPgV~~~~~~~g 204 (400)
|||||||+|++ +++|++|++|+|+|.+|+++|+|+|+|+|++||++||+ +||||+|++||||++++ +.|
T Consensus 79 --wpiPi~L~v~~--~~~l~~g~~v~L~d~~g~~~a~l~v~e~~~~dk~~~a~~~~~~~~v~gt~d~~HPgv~~~~-~~g 153 (396)
T 1jhd_A 79 --FPVPVLCLLEN--TDAIGDAKRIALRDPNVEGNPVLAVMDIEAIEEVSDEQMAVMTDKVYRTTDMDHIGVKTFN-SQG 153 (396)
T ss_dssp --CCSCCCCEESC--STTTTTCSEEEEECTTSTTCCEEEEEECCEEEECCHHHHHHHHHHHHSCCCTTSHHHHHHT-TSC
T ss_pred --ccEEEEEecch--hhhCCCCCEEEEECCCCceEEEEEeeeeeccChHHHhhhhcccccEECCCCCCCcchHHHh-hcC
Confidence 59999999987 88999999999998899999999999999999999999 99999999999999865 789
Q ss_pred CEEEeeeEEEeccCCCCCCCCcccCCHHHHHHHHHhcCCCceEEeeeCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEec
Q 015787 205 NWLIGGDLEVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHP 284 (400)
Q Consensus 205 ~~~vgG~v~~l~~~~~~~~f~~~r~tP~e~R~~f~~~gw~~VvAfQtRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~P 284 (400)
+|+|||+|++++++.|+++|++||+||+|+|+.|+++||++|+|||||||+||||++|++.| ++.. ..++|+|||
T Consensus 154 ~~~vgG~v~~l~~~~~~~~~~~~~~tP~e~R~~f~~~gw~~VvafqTrNPiHrgH~~l~~~A----le~~-~~D~vll~P 228 (396)
T 1jhd_A 154 RVAVSGPIQVLNFSYFQADFPDTFRTAVEIRNEIKEHGWSKVVAFQTRNPMHRAHEELCRMA----MESL-DADGVVVHM 228 (396)
T ss_dssp SEEEEEEEEECCCHHHHHHCTTTBCCHHHHHHHHHHHTCSSEEEEEESSCCCHHHHHHHHHH----HHHH-TCSEEEEEE
T ss_pred CEEEEEEEEEEecccccccchhhcCCHHHHHHHHHhcCCceEEEeccCCCCchHHHHHHHHH----HHHc-CCCeEEEEE
Confidence 99999999999998877789999999999999999999999999999999999999999854 4431 136799999
Q ss_pred ccCCCCCCCCChHHHHHHHHHHHHcCCCCCCcEEEEeCCCCCCCCChhHHHHHHHHHHhcCCcEEEecCCCCCCCCCCCC
Q 015787 285 LGGYTKADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPVEK 364 (400)
Q Consensus 285 lvG~tK~dDi~~~~R~r~ye~ll~~~y~p~~~~~l~~lp~~mryAGPREallHAiiRkNyGcThfIVGRDHAGvG~~~~~ 364 (400)
++|++|+||+|+++|++||+++++ +|||+++++++++|++|+||||||++||||+|||||||||||||||||+|
T Consensus 229 ~~g~~K~~di~~~~R~~~~~~~~~-~~~p~~~v~l~~~p~~m~~aGPreailhaiirkn~G~t~fIVGrDhag~~----- 302 (396)
T 1jhd_A 229 LLGKLKKGDIPAPVRDAAIRTMAE-VYFPPNTVMVTGYGFDMLYAGPREAVLHAYFRQNMGATHFIIGRDHAGVG----- 302 (396)
T ss_dssp EECCCCTTCCCHHHHHHHHHHHHH-HHSCTTCEEEEEEECCCCCCTHHHHHHHHHHHHHTTCSEEEECTTTTCCT-----
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHH-hcCCCcceEEEechHHhhcCCchHHHHHHHHHHcCCCcEEEECCCCCCcc-----
Confidence 999999999999999999999999 79999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchhhhHhhhC-CCC-CcceEEEeeeeeccCC
Q 015787 365 RDLYDADHGKKVLSMA-PGL-ERLNILPFKVCKASDH 399 (400)
Q Consensus 365 ~~~Yd~~~aq~i~~~~-~~l-~~i~I~p~~~~vYc~~ 399 (400)
+||++|+||+||+++ +++ .+|+|++++.++||.+
T Consensus 303 -~~y~~~~aq~il~~~~~~~~l~i~iv~~~~~~Y~~~ 338 (396)
T 1jhd_A 303 -DYYGAFDAQTIFDDEVPEGAMEIEIFRADHTAYSKK 338 (396)
T ss_dssp -TCSCTTHHHHHHHHTSCTTSCSCEEEECCCEEEETT
T ss_pred -ccCCcchHHHHHHhcccccccceeEEecccceecCC
Confidence 999999999999987 433 4799999999999975
No 6
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=100.00 E-value=2.5e-105 Score=840.48 Aligned_cols=309 Identities=24% Similarity=0.342 Sum_probs=273.5
Q ss_pred CCccCCCCcceeecccCchhHHHHHHHhccCCeEeeChhhHHHHHHHhcCCcCCCCCCCChhhhhcccccCCeecCCCCe
Q 015787 51 AGLIEPDGGKLTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSV 130 (400)
Q Consensus 51 ~~li~PhGg~lv~l~v~~~~~~~l~~ea~~lp~i~l~~~~l~dLelL~~G~fSPL~GFM~e~dy~sVl~~~~mrL~dG~~ 130 (400)
++|+.||||+|++| |+++++++++++|++||+|.||++++||||||++|+||||+||||++||+||+ ++|||+||++
T Consensus 3 ~~~~~phgg~l~~~-~~~~~~~~~~~~a~~~~~~~l~~~~~~dlell~~G~~sPl~gfm~~~d~~~v~--~~~~l~~g~~ 79 (552)
T 3cr8_A 3 NQLIEPYGGTLVNL-IDPEKREALKHEALSLPSLDLDWQQQCELEMLMTGAYSPLTGFMTRAQCARVE--SAQQLDDGSF 79 (552)
T ss_dssp CCCCCCGGGSCCCC-BCGGGHHHHHHHHHTSCEEECCHHHHHHHHHHHHTTTTTCCEECCHHHHHHHH--HHCBCTTCCB
T ss_pred CCCCCCCCCccccC-CChHHHHHHHHHhccCCeEecCHHHHHHHHHHhcCCccCCcccCCHHHHHHHH--HhCcCCCCCC
Confidence 45889999999999 99999999999999999999999999999999999999999999999999999 6999999987
Q ss_pred eecceeEEEecCHHHHHhcCCCCeEEEEcCCCcEEEEEEeCccccCCHHHHHHHhhCCCCCCChhHHHHHHhcCCEEEee
Q 015787 131 VNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGG 210 (400)
Q Consensus 131 ~pwpiPI~L~v~~e~a~~l~~G~~vaL~d~eG~~vAiL~V~eif~~dk~~ea~~vfGT~d~~HPgV~~~~~~~g~~~vgG 210 (400)
|||||||+|++|++++|++|++|+|+|.+|+++|+|+|+|+|++| |+|+|||
T Consensus 80 --~~~Pi~l~v~~~~~~~l~~g~~v~L~~~~g~~~a~l~v~e~~~~d--------------------------g~~~v~G 131 (552)
T 3cr8_A 80 --WPSPITLTSRDRALADRRPGERLALRDGEGYMLAILTLSDVWKDG--------------------------ERWHLAG 131 (552)
T ss_dssp --CCSCCCEEECCGGGTTCCTTCEEEEECTTSCEEEEEEEEEEEEET--------------------------TEEEEEE
T ss_pred --cceEEEEeCCHhHhhccCCCCEEEEECCCCcEEEEEEEEEEEeeC--------------------------CCEEEEE
Confidence 699999999999999999999999998899999999999999997 9999999
Q ss_pred eEEEeccCCCCCCCCcccCCHHHHHHHHHhcCCCceEEeeeCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCC
Q 015787 211 DLEVLEPIKYHDGLDRFRLSPAQLRDEFSKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTK 290 (400)
Q Consensus 211 ~v~~l~~~~~~~~f~~~r~tP~e~R~~f~~~gw~~VvAfQtRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG~tK 290 (400)
+|+++++|.|+ +|++||+||+|+|+.|+++||++|||||||||+|||||++++. +++|.+ ++||||||+|+||
T Consensus 132 ~v~~~~~~~~~-~~~~~~~tp~e~r~~~~~~gw~~v~afqtrnp~Hrah~~~~~~---~~~~~~---~~lll~pl~g~~k 204 (552)
T 3cr8_A 132 EVEGAALPPHP-DFVSLRATPAELRALFVRRGWRRIIAWQARQPMHRAQYEFCLK---SAIENE---ANLLLHPQVGGDI 204 (552)
T ss_dssp EEEESCCCCCC-TTTTTBCCHHHHHHHHHHTTCCSEEEECCSSCCCHHHHHHHHH---HHHHTT---CEEEECCBCCCCT
T ss_pred EEEEEecCCcC-CchhhcCCHHHHHHHHHhcCCCceEEEecCCCCchHHHHHHHH---HHHhcC---CeEEEEeccCCCC
Confidence 99999988887 6999999999999999999999999999999999999999874 455764 8899999999999
Q ss_pred CCCCChHHHHHHHHHHHHcCCCCCCcEEEEeCCCCCCCCChhHHHHHHHHHHhcCCcEEEecCCCCCCCCCCCCCCCCCC
Q 015787 291 ADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPVEKRDLYDA 370 (400)
Q Consensus 291 ~dDi~~~~R~r~ye~ll~~~y~p~~~~~l~~lp~~mryAGPREallHAiiRkNyGcThfIVGRDHAGvG~~~~~~~~Yd~ 370 (400)
+||+|+++|||||+++++ +| |+++++|++||++|||||||||+||||||||||||||||||||||||+++++.+||++
T Consensus 205 ~~d~~~~~r~~~~~~~~~-~~-p~~~~~l~~~p~~m~~agprea~~ha~~r~n~G~th~ivGrdhag~g~~~~~~~~Y~~ 282 (552)
T 3cr8_A 205 TEAPAYFGLVRSFLAIRD-RF-PAATTQLSLLPAPPPEASGRALLLRAIVARNFGCSLLIAGGEHQPDGGDCRRGEDLTQ 282 (552)
T ss_dssp TTCTTHHHHHHHHHHHGG-GS-CGGGEEECBBCSCCCCSCSHHHHHHHHHHHHHTCSEEEC-------------------
T ss_pred CCCCCHHHHHHHHHHHHH-hC-CCccEEEeecchhhcccCcHHHHHHHHHHHhCCCCeeeeCCCCCCCCCCCCccccCCc
Confidence 999999999999999999 45 9999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhHhhhCCCCCcceEEEeeeeeccCC
Q 015787 371 DHGKKVLSMAPGLERLNILPFKVCKASDH 399 (400)
Q Consensus 371 ~~aq~i~~~~~~l~~i~I~p~~~~vYc~~ 399 (400)
|+||+||++++++.+|++++|..++||..
T Consensus 283 ~~a~~i~~~~~~~l~i~pv~f~~~~y~~~ 311 (552)
T 3cr8_A 283 NRVDPSVAERAEKIGVRLIAYPRMVYVED 311 (552)
T ss_dssp ---CCSSHHHHHHHTCEEECCCCEEEEGG
T ss_pred chHHHHHHhhhhhcCCeeeeccceEEecC
Confidence 99999999996566899999999999964
No 7
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=100.00 E-value=3.4e-103 Score=822.63 Aligned_cols=311 Identities=30% Similarity=0.496 Sum_probs=295.4
Q ss_pred HHhccCCeEeeChhhHHHHHHHhcCCcCCCCCCCChhhhhcccccCCeecCCCCeeecceeEEEecCHHHHHhcCCCCeE
Q 015787 76 REAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRV 155 (400)
Q Consensus 76 ~ea~~lp~i~l~~~~l~dLelL~~G~fSPL~GFM~e~dy~sVl~~~~mrL~dG~~~pwpiPI~L~v~~e~a~~l~~G~~v 155 (400)
++|++||+|.||++++||||||++||||||+||||++||+||+ ++|||+||++ |||||||+|+++++++|++|++|
T Consensus 2 ~~~~~~~~~~~~~~~~~dl~~l~~G~~sPl~gfm~~~d~~~v~--~~~~l~~g~~--~~~Pi~l~v~~~~~~~l~~g~~v 77 (546)
T 2gks_A 2 EKIKYLKSIQISQRSVLDLELLAVGAFTPLDRFMGEEDYRNVV--ESMRLKSGTL--FPIPITLPMEKEIAKDLKEGEWI 77 (546)
T ss_dssp --CCSSEEEECCHHHHHHHHHHHTTTTTTCCSSCCHHHHHHHH--HHSBCTTSCB--CCSCCCEEECHHHHTTCCTTCEE
T ss_pred cccccCCeEecCHHHHHHHHHHhcCCcCCccccCCHHHHHHHH--HhCcCCCCCC--cceeEEEeCCHHHHhhcCCCCEE
Confidence 5789999999999999999999999999999999999999999 6999999987 69999999999999999999999
Q ss_pred EEEcCCCcEEEEEEeCccccCCHHHHHHHhhCCCCCCChhHHHHHHhcCCEEEeeeEEEeccCCCCCCCCcccCCHHHHH
Q 015787 156 ALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGDLEVLEPIKYHDGLDRFRLSPAQLR 235 (400)
Q Consensus 156 aL~d~eG~~vAiL~V~eif~~dk~~ea~~vfGT~d~~HPgV~~~~~~~g~~~vgG~v~~l~~~~~~~~f~~~r~tP~e~R 235 (400)
+|+|.+|+++|+|+|+|+|++||++||++||||+|++||||++++ +.|+|+|||+|+++++|.|+ +|++||+||+|+|
T Consensus 78 ~L~~~~g~~~a~l~v~e~~~~dk~~~~~~v~gt~~~~hp~v~~~~-~~g~~~~~G~~~~l~~~~~~-~~~~~~~tp~e~r 155 (546)
T 2gks_A 78 VLRDPKNVPLAIMRVEEVYKWNLEYEAKNVLGTTDPRHPLVAEMH-TWGEYYISGELKVIQLPKYY-DFPEYRKTPKQVR 155 (546)
T ss_dssp EEECTTCCEEEEEECCEEEECCHHHHHHHHHSCCCTTSHHHHHHT-TSCSEEEECCEEESCCCCCC-SCGGGBCCHHHHH
T ss_pred EEECCCCeeEEEEEeceeecCCHHHHHHHHhCCCCCCCcchHHHh-hcCCEEEEEEEEEeecCCcC-CcHhhcCCHHHHH
Confidence 999889999999999999999999999999999999999999876 56999999999999998887 6999999999999
Q ss_pred HHHHhcCCCceEEeeeCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCCCCCChHHHHHHHHHHHHcCCCCCC
Q 015787 236 DEFSKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLEDGVLDPE 315 (400)
Q Consensus 236 ~~f~~~gw~~VvAfQtRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG~tK~dDi~~~~R~r~ye~ll~~~y~p~~ 315 (400)
+.|+++||++|||||||||+|||||+||+.| +.+. +++|||||++|+||+||+|+++|++||+++++ +|||++
T Consensus 156 ~~~~~~gw~~v~afqtrnP~Hr~H~~l~~~a---~~~~---~~~llv~p~~g~~k~~di~~~~R~~~~~~~~~-~~~p~~ 228 (546)
T 2gks_A 156 EEIKSLGLDKIVAFQTRNPMHRVHEELTKRA---MEKV---GGGLLLHPVVGLTKPGDVDVYTRMRIYKVLYE-KYYDKK 228 (546)
T ss_dssp HHHHHHTCSCEEEECCSSCCCHHHHHHHHHH---HHHH---TSEEEECCBCSBCCTTSCCHHHHHHHHHHHHH-HHSCTT
T ss_pred HHHHHcCCCcEEEEecCCCCcHHHHHHHHHH---HHhc---CCcEEEEeCcCCCCCCCCCHHHHHHHHHHHHH-hcCCCC
Confidence 9999999999999999999999999998743 4455 48999999999999999999999999999999 799999
Q ss_pred cEEEEeCCCCCCCCChhHHHHHHHHHHhcCCcEEEecCCCCCCCCCCCCCCCCCCchhhhHhhhCCCCCcceEEEeeeee
Q 015787 316 TTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPVEKRDLYDADHGKKVLSMAPGLERLNILPFKVCK 395 (400)
Q Consensus 316 ~~~l~~lp~~mryAGPREallHAiiRkNyGcThfIVGRDHAGvG~~~~~~~~Yd~~~aq~i~~~~~~l~~i~I~p~~~~v 395 (400)
+++++++|++|||||||||+||||||||||||||||||||||||++.++.+||++|+||+||++++++.+|++++|..++
T Consensus 229 ~v~~~~~p~~m~~agprea~~ha~ir~n~G~th~ivgrdhag~g~~~~~~~~Y~~~~a~~~~~~~~~~lgi~~v~fd~~~ 308 (546)
T 2gks_A 229 KTILAFLPLAMRMAGPREALWHGIIRRNYGATHFIVGRDHASPGKDSKGKPFYDPYEAQELFKKYEDEIGIKMVPFEELV 308 (546)
T ss_dssp TEEECBBCCBCCCCTHHHHHHHHHHHHHTTCSEEEECTTTTCCCBCTTSCBSSCTTHHHHHHHHHHHHHTCEEEECCCCE
T ss_pred cEEEeecCchhhccCchHHHHHHHHHHhCCCCeEEECCCCCCCCCCCCCcccCCcchHHHHHHhcccccCceEEeccceE
Confidence 99999999999999999999999999999999999999999999999999999999999999998655589999999999
Q ss_pred ccCC
Q 015787 396 ASDH 399 (400)
Q Consensus 396 Yc~~ 399 (400)
||.+
T Consensus 309 y~~~ 312 (546)
T 2gks_A 309 YVPE 312 (546)
T ss_dssp EETT
T ss_pred EEcC
Confidence 9975
No 8
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=100.00 E-value=2.2e-98 Score=749.83 Aligned_cols=294 Identities=30% Similarity=0.461 Sum_probs=280.0
Q ss_pred ccCCeEeeChhhHHHHHHHhcCCcCCCCCCCChhhhhcccccCCeecCCCCeeecceeEEEecCHHHHHhcCCCCeEEEE
Q 015787 79 ATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALV 158 (400)
Q Consensus 79 ~~lp~i~l~~~~l~dLelL~~G~fSPL~GFM~e~dy~sVl~~~~mrL~dG~~~pwpiPI~L~v~~e~a~~l~~G~~vaL~ 158 (400)
++||+|.||++++||||||++||||||+||||++||+||+ ++|||+||++ |||||||+|+++ ++|++|++|+|
T Consensus 3 ~~lp~i~l~~~~~~dlell~~G~fsPL~GfM~~~d~~~v~--~~~rl~~G~~--wpiPi~L~v~~~--~~l~~g~~v~L- 75 (349)
T 1v47_A 3 ETLPALEIGEDERLDLENLATGAFFPVKGFMTREEALSVA--HEMRLPTGEV--WTIPILLQFREK--PRVGPGNTVAL- 75 (349)
T ss_dssp -CCCEEECCHHHHHHHHHHHTTTTTTCCSBCCHHHHHHHH--HHSBCTTSCB--CCSCCCEEESSC--CSCCTTCEEEE-
T ss_pred ccCceeecCHHHHHHHHHHhcCCccCccccCCHHHHHHHH--HhCcCCCCCC--cCeEEEecCChh--hcCCCCCEEEE-
Confidence 5799999999999999999999999999999999999999 6999999988 599999999988 78999999999
Q ss_pred cCCCcEEEEEEeCccccCCHHHHHHHhhCCCCCCChhHHHHHHhcCCEEEeeeEEEeccCCCCCCCCcccCCHHHHHHHH
Q 015787 159 DSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGDLEVLEPIKYHDGLDRFRLSPAQLRDEF 238 (400)
Q Consensus 159 d~eG~~vAiL~V~eif~~dk~~ea~~vfGT~d~~HPgV~~~~~~~g~~~vgG~v~~l~~~~~~~~f~~~r~tP~e~R~~f 238 (400)
|.+|+++|+|+|+|+|++||++||++||||+|++||||++++ +.|+|+|||+|++++ + ++|++||+||+|+|+.|
T Consensus 76 ~~~g~~~a~l~v~e~~~~dk~~~~~~v~gt~d~~HPgv~~~~-~~g~~~vgG~v~~l~---~-~~f~~~~~tP~e~r~~f 150 (349)
T 1v47_A 76 LHGGERVALLHVAEAYELDLEALARAVFGTDSETHPGVARLY-GKGPYALAGRVEVLK---P-RPRTPLEKTPEEVRAFF 150 (349)
T ss_dssp EETTEEEEEEECCEEEECCHHHHHHHHHSCCCTTSHHHHHHH-HTCSEEEEBCEEESS---C-CCCCTTCCCHHHHHHHH
T ss_pred ccCCeeEEEEEeeeeeccCHHHHHHHHhCCCCcCCcchHHHh-hcCCEEEEEEEEEEE---c-CCchhhcCCHHHHHHHH
Confidence 679999999999999999999999999999999999999865 689999999999999 3 48999999999999999
Q ss_pred HhcCCCceEEeeeCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCCCCCChHHHHHHHHHHHHcCCCCCCcEE
Q 015787 239 SKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLEDGVLDPETTV 318 (400)
Q Consensus 239 ~~~gw~~VvAfQtRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG~tK~dDi~~~~R~r~ye~ll~~~y~p~~~~~ 318 (400)
+++||++|+|||||||+||||++|++ +|+|. .++|||||++|++|+||+|+++|++||+++++ +|||+++++
T Consensus 151 ~~~gw~~VvafqTrNPiHrgH~~l~~----~ale~---~d~vll~P~~g~~K~~d~~~~~R~~~~~~~i~-~~~p~~~~~ 222 (349)
T 1v47_A 151 RQRGWRKVVAFQTRNAPHRAHEYLIR----LGLEL---ADGVLVHPILGAKKPDDFPTEVIVEAYQALIR-DFLPQERVA 222 (349)
T ss_dssp HHTTCCSEEEEEESSCCCHHHHHHHH----HHHHH---SSEEEEEEBCSCCCTTSCCHHHHHHHHHHHHH-HHSCGGGEE
T ss_pred HhcCCCeEEEeecCCCCchHHHHHHH----HHHHh---CCcEEEEECCCCCCCCCCCHHHHHHHHHHHHh-hcCCCcceE
Confidence 99999999999999999999999987 45665 38999999999999999999999999999999 799999999
Q ss_pred EEeCCCCCCCCChhHHHHHHHHHHhcCCcEEEecCCCCCCCCCCCCCCCCCCchhhhHhhhCCCCCcceEEEeeeeeccC
Q 015787 319 VSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPVEKRDLYDADHGKKVLSMAPGLERLNILPFKVCKASD 398 (400)
Q Consensus 319 l~~lp~~mryAGPREallHAiiRkNyGcThfIVGRDHAGvG~~~~~~~~Yd~~~aq~i~~~~~~l~~i~I~p~~~~vYc~ 398 (400)
++++|++||||||||++||||+|||||||||||||||||+| +||++++||+||+++++ .+|+|++++.++||.
T Consensus 223 l~~~p~~m~~aGPreailhaiirkn~G~t~fIVGrDhag~~------~~y~~~~aq~i~~~~~~-l~i~~v~~~~~~Y~~ 295 (349)
T 1v47_A 223 FFGLATPMRYAGPKEAVFHALVRKNFGATHFLVGRDHAGVG------DFYDPYAAHRIFDRLPP-LGIEIVKVGAVFHCP 295 (349)
T ss_dssp ECCBCSCCCCCTHHHHHHHHHHHHHTTCSEEEECTTTTCST------TCSCTTHHHHGGGGSCC-CSSEEEECCCEEEET
T ss_pred EEechHHhhcCCcHHHHHHHHHHHcCCCcEEEECcCCCCcc------cccCcccHHHHHHhhhh-cCceEEeccccEEcc
Confidence 99999999999999999999999999999999999999999 99999999999999985 489999999999997
Q ss_pred C
Q 015787 399 H 399 (400)
Q Consensus 399 ~ 399 (400)
+
T Consensus 296 ~ 296 (349)
T 1v47_A 296 L 296 (349)
T ss_dssp T
T ss_pred c
Confidence 5
No 9
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=97.29 E-value=0.00091 Score=57.98 Aligned_cols=87 Identities=14% Similarity=0.074 Sum_probs=57.8
Q ss_pred EEeeeCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCC--CCCChHHHHHHHHHHHHcCCCCCCcEEEEeCCC
Q 015787 247 FAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKA--DDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPS 324 (400)
Q Consensus 247 vAfQtRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG~tK~--dDi~~~~R~r~ye~ll~~~y~p~~~~~l~~lp~ 324 (400)
+..=|.||+|+||..|++. |++.. +.+++.|...+.|+ ..++.+.|++-.+..+. ++ +.+.+..+.
T Consensus 4 v~~GsFdp~H~GH~~l~~~----a~~~~---d~v~v~~~~~p~k~~~~~~~~~~R~~ml~~a~~-~~---~~v~v~~~e- 71 (160)
T 1od6_A 4 VYPGSFDPLTNGHLDVIQR----ASRLF---EKVTVAVLENPSKRGQYLFSAEERLAIIREATA-HL---ANVEAATFS- 71 (160)
T ss_dssp EEEECCTTCCHHHHHHHHH----HHHHS---SEEEEEEECC-----CCSSCHHHHHHHHHHHTT-TC---TTEEEEEEC-
T ss_pred EEEeeeCCCCHHHHHHHHH----HHHHC---CEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHhc-CC---CCEEEEecC-
Confidence 3334899999999999874 45542 45677776555565 57899999998887665 22 356666555
Q ss_pred CCCCCChhHHHHHHHHHHhcCCcEEEecCCC
Q 015787 325 PMHYAGPTEVQWHAKARINAGANFYIVGRDP 355 (400)
Q Consensus 325 ~mryAGPREallHAiiRkNyGcThfIVGRDH 355 (400)
| .+...+ +.+++.+||+|-|.
T Consensus 72 -----~----~~~~~l-~~l~~~~~v~G~d~ 92 (160)
T 1od6_A 72 -----G----LLVDFV-RRVGAQAIVKGLRA 92 (160)
T ss_dssp -----S----CHHHHH-HHTTCSEEEEEECT
T ss_pred -----c----hHHHHH-HHcCCCEEEEeCCc
Confidence 3 122233 77999999999883
No 10
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=97.26 E-value=0.0022 Score=55.30 Aligned_cols=84 Identities=23% Similarity=0.185 Sum_probs=59.9
Q ss_pred eeCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCCCCCChHHHHHHHHHHHHcCCCCCCcEEEEeCCCCCCCC
Q 015787 250 QLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYA 329 (400)
Q Consensus 250 QtRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG~tK~dDi~~~~R~r~ye~ll~~~y~p~~~~~l~~lp~~mryA 329 (400)
=|.||+|+||..|++ .|.+.. +-+++.|...+.|...++.+.|++-.+..+. + + +.+.+..+.. |
T Consensus 8 GsFDpvH~GH~~l~~----~a~~~~---d~v~v~~~~~p~k~~~~~~~~R~~ml~~a~~-~-~--~~v~v~~~~~---~- 72 (158)
T 1qjc_A 8 GTFDPITNGHIDIVT----RATQMF---DHVILAIAASPSKKPMFTLEERVALAQQATA-H-L--GNVEVVGFSD---L- 72 (158)
T ss_dssp ECCTTCCHHHHHHHH----HHHTTS---SEEEEEEESCCSSCCSSCHHHHHHHHHHHTT-T-C--TTEEEEEECS---C-
T ss_pred ecCCCCCHHHHHHHH----HHHHhC---CEEEEEECCCCCCCCCCCHHHHHHHHHHHHh-c-C--CCeEEcccch---H-
Confidence 389999999999986 455653 5577777777777677899999998887665 2 2 3555655541 2
Q ss_pred ChhHHHHHHHHHHhcCCcEEEecCCC
Q 015787 330 GPTEVQWHAKARINAGANFYIVGRDP 355 (400)
Q Consensus 330 GPREallHAiiRkNyGcThfIVGRDH 355 (400)
+-..+ +.+++++||+|-|.
T Consensus 73 ------~~~~l-~~l~~~~~v~G~d~ 91 (158)
T 1qjc_A 73 ------MANFA-RNQHATVLIRGLRA 91 (158)
T ss_dssp ------HHHHH-HHTTCCEEEEECCT
T ss_pred ------HHHHH-HHcCCCEEEEeccc
Confidence 22233 66799999999764
No 11
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=96.79 E-value=0.0093 Score=53.19 Aligned_cols=98 Identities=13% Similarity=0.122 Sum_probs=62.6
Q ss_pred eEEeeeCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccCC---CCCCCCChHHHHHHHHHHHHcCCCCCCcEEEEeC
Q 015787 246 VFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGY---TKADDVPLSWRMKQHEKVLEDGVLDPETTVVSIF 322 (400)
Q Consensus 246 VvAfQtRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG~---tK~dDi~~~~R~r~ye~ll~~~y~p~~~~~l~~l 322 (400)
++..=|.||+|+||..|++. |.+.. +-+.+.+..+. +|...++.+.|++-.+..+.+.-++.+.+.+..+
T Consensus 6 ~i~~G~Fdp~H~GH~~l~~~----a~~~~---d~v~v~v~~~~~p~~~~~~~~~~~R~~~~~~a~~~~~~~~~~v~v~~~ 78 (181)
T 1ej2_A 6 GLLVGRMQPFHRGHLQVIKS----ILEEV---DELIICIGSAQLSHSIRDPFTAGERVMMLTKALSENGIPASRYYIIPV 78 (181)
T ss_dssp EEEEECCTTCCHHHHHHHHH----HTTTC---SEEEEEECSTTCCSSSSSCSCHHHHHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred EEEEEEcCCcCHHHHHHHHH----HHHhC---CeeEEEECCCCCCcCCCCCCCHHHHHHHHHHHHhhCCCCCCcEEEEec
Confidence 34444999999999999863 44542 44444332332 2445789999999999877632122345555444
Q ss_pred CCCCCCCChhHHHHHHHHHH-hcCCcEEEecCCC
Q 015787 323 PSPMHYAGPTEVQWHAKARI-NAGANFYIVGRDP 355 (400)
Q Consensus 323 p~~mryAGPREallHAiiRk-NyGcThfIVGRDH 355 (400)
. ..+ ....|+..+++ .++|+.+++|||.
T Consensus 79 d--~~~---~~~~w~~~~~~l~~~~~~~v~gr~~ 107 (181)
T 1ej2_A 79 Q--DIE---CNALWVGHIKMLTPPFDRVYSGNPL 107 (181)
T ss_dssp C--CCS---CHHHHHHHHHHHSCCCSEEECCCHH
T ss_pred C--ccC---CHHHHHHHHHHHCCCCCEEEECCHH
Confidence 3 333 24578886664 5689999999985
No 12
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=96.54 E-value=0.017 Score=50.54 Aligned_cols=89 Identities=13% Similarity=0.063 Sum_probs=59.7
Q ss_pred eEEeeeCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCCCCCChHHHHHHHHHHHHcCCCCCCcEEEEeCCCC
Q 015787 246 VFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSP 325 (400)
Q Consensus 246 VvAfQtRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG~tK~dDi~~~~R~r~ye~ll~~~y~p~~~~~l~~lp~~ 325 (400)
++..=+-||+|+||..|++. |++.. +-+++.|..-+.|..-++.+.|++-.+..+. + + +.+.+..+.
T Consensus 5 ~i~~GsFDpvH~GH~~li~~----a~~~~---d~v~v~~~~~p~k~~l~~~~~R~~ml~~a~~-~-~--~~v~v~~~e-- 71 (169)
T 1o6b_A 5 AVCPGSFDPVTYGHLDIIKR----GAHIF---EQVYVCVLNNSSKKPLFSVEERCELLREVTK-D-I--PNITVETSQ-- 71 (169)
T ss_dssp EEEEECCTTCCHHHHHHHHH----HHHHS---SEEEEEECCCCSSCCSSCHHHHHHHHHHHHT-T-C--TTEEEEECS--
T ss_pred EEEEEeeCCCCHHHHHHHHH----HHHhC---CEEEEEECCCCccCCCCCHHHHHHHHHHHHh-c-C--CCEEEcccc--
Confidence 34445999999999999874 45542 4466666544456567899999998887765 2 2 345555554
Q ss_pred CCCCChhHHHHHHHHHHhcCCcEEEecCCCC
Q 015787 326 MHYAGPTEVQWHAKARINAGANFYIVGRDPA 356 (400)
Q Consensus 326 mryAGPREallHAiiRkNyGcThfIVGRDHA 356 (400)
+- ... . -+.+++..||+|-|..
T Consensus 72 ----~~---~~~-~-l~~l~~~~~i~G~d~~ 93 (169)
T 1o6b_A 72 ----GL---LID-Y-ARRKNAKAILRGLRAV 93 (169)
T ss_dssp ----SC---HHH-H-HHHTTCSEEEEEECSG
T ss_pred ----hH---HHH-H-HHHcCCCEEEEcCccc
Confidence 11 222 1 2678999999998854
No 13
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=96.39 E-value=0.013 Score=53.54 Aligned_cols=97 Identities=16% Similarity=0.178 Sum_probs=63.0
Q ss_pred EEeeeCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccC-CCCC-CCCChHHHHHHHHHHHHcCCCCCCcEEEEeCCC
Q 015787 247 FAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGG-YTKA-DDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPS 324 (400)
Q Consensus 247 vAfQtRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG-~tK~-dDi~~~~R~r~ye~ll~~~y~p~~~~~l~~lp~ 324 (400)
+..=|-||+|+||..|++.|.+.+ + .+.+++.|... ..|+ .-++.+.|++-.+..++ + .| .+.+ .+.
T Consensus 7 i~~GsFdPiH~GH~~l~~~a~~~~---~--~d~v~~~~~~~~~~k~~~~~~~~~R~~ml~~a~~-~-~~--~v~v--~~~ 75 (213)
T 1k4m_A 7 LFGGTFDPVHYGHLKPVETLANLI---G--LTRVTIIPNNVPPHRPQPEANSVQRKHMLELAIA-D-KP--LFTL--DER 75 (213)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHH---T--CSCEEEEECSSCTTSCCCSSCHHHHHHHHHHHHT-T-CT--TEEE--CCH
T ss_pred EEEeCcCCCCHHHHHHHHHHHHHc---C--CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHhc-c-CC--CEEE--eHH
Confidence 344499999999999987554332 2 13466666544 3453 46899999999997776 2 22 3444 444
Q ss_pred CCCCCCh--hHHHHHHHHHHhcCCc---EEEecCCC
Q 015787 325 PMHYAGP--TEVQWHAKARINAGAN---FYIVGRDP 355 (400)
Q Consensus 325 ~mryAGP--REallHAiiRkNyGcT---hfIVGRDH 355 (400)
....+|| ..-.+.. +++.||++ .||+|-|.
T Consensus 76 e~~~~~~s~t~~~l~~-l~~~~~~~~~~~~i~G~D~ 110 (213)
T 1k4m_A 76 ELKRNAPSYTAQTLKE-WRQEQGPDVPLAFIIGQDS 110 (213)
T ss_dssp HHHCSSCCCHHHHHHH-HHHHHCTTSCEEEEEEHHH
T ss_pred HhcCCCCCcHHHHHHH-HHHHhCCCCcEEEEEehhh
Confidence 4455564 3333443 77788998 89999864
No 14
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=95.78 E-value=0.049 Score=48.81 Aligned_cols=99 Identities=18% Similarity=0.146 Sum_probs=57.5
Q ss_pred eEEeeeCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecc-cCCCC--CCCCChHHHHHHHHHHHHcCCCCCCcEEEEeC
Q 015787 246 VFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPL-GGYTK--ADDVPLSWRMKQHEKVLEDGVLDPETTVVSIF 322 (400)
Q Consensus 246 VvAfQtRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~Pl-vG~tK--~dDi~~~~R~r~ye~ll~~~y~p~~~~~l~~l 322 (400)
++..=+-||+|+||..|++.| .+.. ..+.+++.|. .-+.| ..-.+.+.|++-.+..++ + +| .+.+ .
T Consensus 10 ~v~~GsFdp~H~GH~~l~~~a----~~~~-~~d~v~~~~~~~~~~k~~~~~~~~~~R~~ml~~a~~-~-~~--~v~v--~ 78 (194)
T 1kam_A 10 GIFGGTFDPPHNGHLLMANEV----LYQA-GLDEIWFMPNQIPPHKQNEDYTDSFHRVEMLKLAIQ-S-NP--SFKL--E 78 (194)
T ss_dssp EEEEECCSSCCHHHHHHHHHH----HHHT-TCSEEEEEECCCC---------CHHHHHHHHHHHHT-T-CT--TEEE--C
T ss_pred EEEEeccccccHHHHHHHHHH----HHHh-CCCEEEEEECCCCCCcCCcCCCCHHHHHHHHHHHHc-C-CC--CeEE--e
Confidence 344459999999999998754 3331 1244666554 22334 345789999999998776 2 23 3333 5
Q ss_pred CCCCCCCChh--HHHHHHHHHHhcCCc--EEEecCCCC
Q 015787 323 PSPMHYAGPT--EVQWHAKARINAGAN--FYIVGRDPA 356 (400)
Q Consensus 323 p~~mryAGPR--EallHAiiRkNyGcT--hfIVGRDHA 356 (400)
+.....+||. .-.+ .-+++.|.-+ .||+|-|..
T Consensus 79 ~~e~~~~~~~~t~~~l-~~l~~~~p~~~~~~v~G~D~~ 115 (194)
T 1kam_A 79 LVEMEREGPSYTFDTV-SLLKQRYPNDQLFFIIGADMI 115 (194)
T ss_dssp CGGGSTTCCCSHHHHH-HHHHHHSTTSEEEEEEETTTT
T ss_pred HHHhcCCCCCChHHHH-HHHHHHCCCCcEEEEEecchh
Confidence 5566666752 2222 2344555544 899999974
No 15
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0
Probab=95.64 E-value=0.053 Score=48.54 Aligned_cols=88 Identities=20% Similarity=0.194 Sum_probs=57.6
Q ss_pred ceEEee-eCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCCCCCChHHHHHHHHHHHHcCCCCCCcEEEEeCC
Q 015787 245 AVFAFQ-LRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFP 323 (400)
Q Consensus 245 ~VvAfQ-tRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG~tK~dDi~~~~R~r~ye~ll~~~y~p~~~~~l~~lp 323 (400)
+|.-|- |-||+|.||..+++ .|.+.. +-+++-|..-+.|..-++.+.|++-.+..++. +| .+.+..+.
T Consensus 4 ki~i~~GsFDPiH~GHl~i~~----~a~~~~---d~viv~v~~~p~K~~~~~~~~R~~ml~~a~~~--~~--~v~v~~~e 72 (168)
T 3f3m_A 4 TIAVIPGSFDPITYGHLDIIE----RSTDRF---DEIHVCVLKNSKKEGTFSLEERMDLIEQSVKH--LP--NVKVHQFS 72 (168)
T ss_dssp CEEEEEECCTTCCHHHHHHHH----HHGGGS---SEEEEEECC-----CCSCHHHHHHHHHHHTTT--CT--TEEEEECC
T ss_pred eEEEEEEEcCcCCHHHHHHHH----HHHHhC---CEEEEEEcCCCCCCCCCCHHHHHHhHHHHhcC--CC--CEEEEEcC
Confidence 444444 99999999999986 455653 56777777666677789999999999887762 33 45555554
Q ss_pred CCCCCCChhHHHHHHHHHHhcCCcEEEecCC
Q 015787 324 SPMHYAGPTEVQWHAKARINAGANFYIVGRD 354 (400)
Q Consensus 324 ~~mryAGPREallHAiiRkNyGcThfIVGRD 354 (400)
|-. .. .-+.++++.||.|-|
T Consensus 73 ------~~t---vd--~~~~l~~~~~I~G~d 92 (168)
T 3f3m_A 73 ------GLL---VD--YCEQVGAKTIIRGLR 92 (168)
T ss_dssp ------SCH---HH--HHHHHTCCEEEEEEC
T ss_pred ------CCH---HH--HHHHcCCCEEEEcCC
Confidence 411 11 124569999999966
No 16
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=95.36 E-value=0.018 Score=51.08 Aligned_cols=93 Identities=17% Similarity=0.216 Sum_probs=57.4
Q ss_pred eeCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecc-cCCCC--CCCCChHHHHHHHHHHHHcCCCCCCcEEEEeCCCCC
Q 015787 250 QLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPL-GGYTK--ADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPM 326 (400)
Q Consensus 250 QtRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~Pl-vG~tK--~dDi~~~~R~r~ye~ll~~~y~p~~~~~l~~lp~~m 326 (400)
=+-||+|+||..|++.| ++.. ..+.+++.|. .-..| ..-.+.+.|++-.+.+++ + .| .+. +.+...
T Consensus 9 GsFDPvH~GH~~li~~a----~~~~-~~d~v~~~~~~~~~~k~~~~~~~~~~R~~ml~~~~~-~-~~--~v~--v~~~e~ 77 (189)
T 2qtr_A 9 GTFDPPHYGHLLIANEV----YHAL-NLEEVWFLPNQIPPHKQGRNITSVESRLQMLELATE-A-EE--HFS--ICLEEL 77 (189)
T ss_dssp ECCSSCCHHHHC-CHHH----HHHT-TCSEEEEEECSSCTTCTTSCCCCHHHHHHHHHHHHT-T-CT--TEE--ECCTGG
T ss_pred cCcccccHHHHHHHHHH----HHHc-CCCEEEEEECCCCCCccCCCCCCHHHHHHHHHHHhC-C-CC--CEE--EehHHh
Confidence 48999999999998754 3331 1245656555 33345 356899999999988776 2 22 333 456666
Q ss_pred CCCChhHHHHHHHHHHhcCCcE------EEecCCCC
Q 015787 327 HYAGPTEVQWHAKARINAGANF------YIVGRDPA 356 (400)
Q Consensus 327 ryAGPREallHAiiRkNyGcTh------fIVGRDHA 356 (400)
..+||.=.+ . .+ +.+++.+ ||+|-|..
T Consensus 78 ~~~~~~~~~-~-~l-~~l~~~~p~~~~~~v~G~D~~ 110 (189)
T 2qtr_A 78 SRKGPSYTY-D-TM-LQLTKKYPDVQFHFIIGGDMV 110 (189)
T ss_dssp GSCSCCCHH-H-HH-HHHHHHCTTCEEEEEEEHHHH
T ss_pred cCCCCCCHH-H-HH-HHHHHHCCCCCEEEEEehhhh
Confidence 777765211 2 11 3445555 89998854
No 17
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A*
Probab=95.03 E-value=0.13 Score=46.86 Aligned_cols=89 Identities=18% Similarity=0.081 Sum_probs=59.6
Q ss_pred CceEEeeeCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCCCCCChHHHHHHHHHHHHcCCCCCCcEEEEeCC
Q 015787 244 DAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFP 323 (400)
Q Consensus 244 ~~VvAfQtRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG~tK~dDi~~~~R~r~ye~ll~~~y~p~~~~~l~~lp 323 (400)
+.++..=+-||+|+||..|+++ |.+.. +-+.+-+..-+.|..-++.+-|++..+.+++ + + +.+.+..|.
T Consensus 23 ki~v~~GsFDpiH~GHl~li~~----A~~~~---d~viv~v~~~p~K~~l~s~eeR~~ml~~~~~-~-v--~~v~v~~f~ 91 (187)
T 3k9w_A 23 VVAVYPGTFDPLTRGHEDLVRR----ASSIF---DTLVVGVADSRAKKPFFSLEERLKIANEVLG-H-Y--PNVKVMGFT 91 (187)
T ss_dssp CEEEEEECCTTCCHHHHHHHHH----HHHHS---SEEEEEEECCGGGCCSSCHHHHHHHHHHHHT-T-C--TTEEEEEES
T ss_pred EEEEEEEeCCcCcHHHHHHHHH----HHHHC---CcEEEEEecCCccCCCCCHHHHHHHHHHHhc-c-C--CcEEEEech
Confidence 3445455999999999999874 45553 4455555555567677899999999998876 2 2 345554443
Q ss_pred CCCCCCChhHHHHHHHHHHhcCCcEEEecCC
Q 015787 324 SPMHYAGPTEVQWHAKARINAGANFYIVGRD 354 (400)
Q Consensus 324 ~~mryAGPREallHAiiRkNyGcThfIVGRD 354 (400)
|-. . -. .+.+|+..+|+|-|
T Consensus 92 ------~~~---~-d~-l~~l~~~~iv~G~r 111 (187)
T 3k9w_A 92 ------GLL---K-DF-VRANDARVIVRGLR 111 (187)
T ss_dssp ------SCH---H-HH-HHHTTCSEEEEECC
T ss_pred ------hhH---H-HH-HHHcCCCEEEECCC
Confidence 321 1 12 34689999999854
No 18
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=94.94 E-value=0.13 Score=43.10 Aligned_cols=90 Identities=18% Similarity=0.218 Sum_probs=53.2
Q ss_pred ceEEeeeCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccC-----CCCCCCCChHHHHHHHHHHHHcCCCCCCcEEE
Q 015787 245 AVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGG-----YTKADDVPLSWRMKQHEKVLEDGVLDPETTVV 319 (400)
Q Consensus 245 ~VvAfQtRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG-----~tK~dDi~~~~R~r~ye~ll~~~y~p~~~~~l 319 (400)
.++..=+-||+|+||..|++. |.+.+ +-+.+-+... ..|..-++.+-|++-.+++ +.. +.+++
T Consensus 3 ~~~~~G~FDp~H~GH~~li~~----a~~~~---~~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~---~~~--d~v~~ 70 (132)
T 2b7l_A 3 RVITYGTYDLLHYGHIELLRR----AREMG---DYLIVALSTDEFNQIKHKKSYYDYEQRKMMLESI---RYV--DLVIP 70 (132)
T ss_dssp EEEEEECCCSCCHHHHHHHHH----HHHTS---SEEEEEEECHHHHHHTTCCCSSCHHHHHHHHHTB---TTC--CEEEE
T ss_pred EEEEeeecCcCCHHHHHHHHH----HHHhC---CcEEEEEECCHHHhccCCCCCCCHHHHHHHHHhc---CCC--CEEEE
Confidence 345555899999999999874 55553 3333333221 1233357889999876632 222 34444
Q ss_pred EeCCCCCCCCChhHHHHHHHHHHhcCCcEEEecCCCCC
Q 015787 320 SIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAG 357 (400)
Q Consensus 320 ~~lp~~mryAGPREallHAiiRkNyGcThfIVGRDHAG 357 (400)
.. .|.+-+-. + +.++++++|+|.|..|
T Consensus 71 ~~--------~~~~~~~~--~-~~~~~~~iv~G~D~~~ 97 (132)
T 2b7l_A 71 EK--------GWGQKEDD--V-EKFDVDVFVMGHDWEG 97 (132)
T ss_dssp EC--------CGGGHHHH--H-HHTTCCEEEECGGGTT
T ss_pred CC--------ChHHHHHH--H-HHcCCCEEEECCCCcC
Confidence 11 22222222 3 5689999999999843
No 19
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=94.85 E-value=0.14 Score=45.36 Aligned_cols=80 Identities=24% Similarity=0.217 Sum_probs=55.9
Q ss_pred eCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCCCCCChHHHHHHHHHHHHcCCCCCCcEEEEeCCCCCCCCC
Q 015787 251 LRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAG 330 (400)
Q Consensus 251 tRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG~tK~dDi~~~~R~r~ye~ll~~~y~p~~~~~l~~lp~~mryAG 330 (400)
|-||+|.||..+++ .|++.. +-|++-|...+.|..-++.+.|++-.+..++ .+| .+.+..+. |
T Consensus 20 sFdP~H~GHl~l~~----~A~~~~---D~viv~v~~~~~kk~~~~~~~R~~ml~~a~~--~~~--~v~v~~~e------~ 82 (173)
T 1vlh_A 20 SFDPITLGHVDIIK----RALSIF---DELVVLVTENPRKKCMFTLEERKKLIEEVLS--DLD--GVKVDVHH------G 82 (173)
T ss_dssp CCTTCCHHHHHHHH----HHHTTC---SEEEEEEECCTTCCCSSCHHHHHHHHHHHTT--TCT--TEEEEEEC------S
T ss_pred EECcCcHHHHHHHH----HHHHHC---CEEEEEEeCCCCCCCCCCHHHHHHHHHHHhc--CCC--CEEEecCc------c
Confidence 89999999999986 456663 6688888777677778999999999987666 233 45555554 3
Q ss_pred hhHHHHHHHHHHhcCCcEEEec
Q 015787 331 PTEVQWHAKARINAGANFYIVG 352 (400)
Q Consensus 331 PREallHAiiRkNyGcThfIVG 352 (400)
- + .-.-+.++++.||-|
T Consensus 83 ~----t-vd~l~~l~~~~~i~g 99 (173)
T 1vlh_A 83 L----L-VDYLKKHGIKVLVRG 99 (173)
T ss_dssp C----H-HHHHHHHTCCEEEEE
T ss_pred h----H-HHHHHHhCCCeEEeC
Confidence 1 1 112245678887743
No 20
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=94.81 E-value=0.091 Score=46.66 Aligned_cols=86 Identities=22% Similarity=0.223 Sum_probs=54.8
Q ss_pred eEEee-eCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCCCCCChHHHHHHHHHHHHcCCCCCCcEEEEeCCC
Q 015787 246 VFAFQ-LRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPS 324 (400)
Q Consensus 246 VvAfQ-tRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG~tK~dDi~~~~R~r~ye~ll~~~y~p~~~~~l~~lp~ 324 (400)
++-|- |-||+|.||..+++ .|.+.+ +-|++-+..-+.|..-++.+.|++..+.++. . +.+.+..+.
T Consensus 7 i~i~~GsFDPiH~GHl~li~----~A~~~~---d~viv~v~~~~~K~~~~~~~~R~~m~~~~~~--~---~~v~V~~~~- 73 (162)
T 4f3r_A 7 IAIYPGTFDPLTNGHVDIIE----RALPLF---NKIIVACAPTSRKDPHLKLEERVNLIADVLT--D---ERVEVLPLT- 73 (162)
T ss_dssp EEEEEECCTTCCHHHHHHHH----HHGGGC---SEEEEEECCC------CCHHHHHHHHHHHCC--C---TTEEEEECC-
T ss_pred EEEEEEEcCCCCHHHHHHHH----HHHHHC---CcEEEEEecCCccCCCCCHHHHHHHHHHhhC--C---CCEEEEecc-
Confidence 43344 99999999999986 456664 5677766655667677899999999887765 2 345555443
Q ss_pred CCCCCChhHHHHHHHHHHhcCCcEEEecCC
Q 015787 325 PMHYAGPTEVQWHAKARINAGANFYIVGRD 354 (400)
Q Consensus 325 ~mryAGPREallHAiiRkNyGcThfIVGRD 354 (400)
|- .--.+ +.+|++.||.|=|
T Consensus 74 -----~l----~~~~~-~~~~~~~~v~G~r 93 (162)
T 4f3r_A 74 -----GL----LVDFA-KTHQANFILRGLR 93 (162)
T ss_dssp -----SC----HHHHH-HHTTCCEEEEEEC
T ss_pred -----ch----HHHHH-HHcCCCEEEECCC
Confidence 31 11223 4579999999954
No 21
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=94.80 E-value=0.042 Score=54.40 Aligned_cols=129 Identities=19% Similarity=0.178 Sum_probs=78.1
Q ss_pred ceEEeeeCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEe----c--ccCCCC--CCCCChHHHHHHHHHHHHcCCCCCCc
Q 015787 245 AVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLH----P--LGGYTK--ADDVPLSWRMKQHEKVLEDGVLDPET 316 (400)
Q Consensus 245 ~VvAfQtRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~----P--lvG~tK--~dDi~~~~R~r~ye~ll~~~y~p~~~ 316 (400)
.|++.=+-+++|+||.+|++.|.+.|.+.+. ..+++. | ++.+.+ .--.+.+.|++-.+.+ --+.
T Consensus 17 ~vvtiG~FDGvH~GHq~Li~~a~~~a~~~~~--~~vvvtFdphP~~v~~~~~~~~~L~~~~eR~~ll~~~------gVD~ 88 (338)
T 2x0k_A 17 SAVTIGVFDGVHRGHQKLINATVEKAREVGA--KAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESF------GIDG 88 (338)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHHHHHHHTC--EEEEEEESSCHHHHHSTTCSCCBSSCHHHHHHHHHHT------TCSE
T ss_pred eEEEEEeCCcccHHHHHHHHHHHHHHHHcCC--cEEEEEecCCHHHHcCCccCCCCCCCHHHHHHHHHhc------CCCE
Confidence 5777779999999999999988777766542 223342 2 333322 2245778888865542 2344
Q ss_pred EEEEeCCCCCCCCC--hhHHHHHHHHHHhcCCcEEEecCCCC-CCCCCCCCCCCCCCchhhhHhhhCCCCCcceEEEeee
Q 015787 317 TVVSIFPSPMHYAG--PTEVQWHAKARINAGANFYIVGRDPA-GMGHPVEKRDLYDADHGKKVLSMAPGLERLNILPFKV 393 (400)
Q Consensus 317 ~~l~~lp~~mryAG--PREallHAiiRkNyGcThfIVGRDHA-GvG~~~~~~~~Yd~~~aq~i~~~~~~l~~i~I~p~~~ 393 (400)
+++ +|....+|. | |.....++.+.+++.+++||-|+. |-+ ..++. +.+..+... +++++.++.
T Consensus 89 v~v--~~F~~~~a~ls~-e~Fi~~il~~~l~~~~ivvG~Df~FG~~------r~g~~----~~L~~~~~~-g~~V~~v~~ 154 (338)
T 2x0k_A 89 VLV--IDFTRELSGTSP-EKYVEFLLEDTLHASHVVVGANFTFGEN------AAGTA----DSLRQICQS-RLTVDVIDL 154 (338)
T ss_dssp EEE--ECTTTSSSSCCH-HHHHHHCCCCCTCEEEEEEETTCEESGG------GCEEH----HHHHHHTTT-TSEEEEECC
T ss_pred EEE--ccccHHHHhCCH-HHHHHHHHHhhcCCCEEEEeecCCCCCC------CCCCH----HHHHHHhcC-CeEEEEECc
Confidence 444 455555553 4 344555667789999999999875 544 23332 223333223 677777665
Q ss_pred ee
Q 015787 394 CK 395 (400)
Q Consensus 394 ~v 395 (400)
..
T Consensus 155 ~~ 156 (338)
T 2x0k_A 155 LD 156 (338)
T ss_dssp CE
T ss_pred Ee
Confidence 43
No 22
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A*
Probab=94.80 E-value=0.13 Score=46.14 Aligned_cols=82 Identities=20% Similarity=0.127 Sum_probs=52.7
Q ss_pred eCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCCCCCChHHHHHHHHHHHHcCCCCCCcEEE-EeCCCCCCCC
Q 015787 251 LRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLEDGVLDPETTVV-SIFPSPMHYA 329 (400)
Q Consensus 251 tRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG~tK~dDi~~~~R~r~ye~ll~~~y~p~~~~~l-~~lp~~mryA 329 (400)
|-||+|.||..+++ .|.+.. +-|++-|..-+.|..-++.+-|++-.+..++ .+| .+.+ ..+.
T Consensus 10 sFDPiH~GHl~i~~----~a~~~~---D~viv~v~~~~~K~~~~~~~~R~~ml~~a~~--~~~--~v~v~~~~e------ 72 (171)
T 3nd5_A 10 SFDPMTNGHLNLIE----RSAKLF---DEVIIGVFINTSKQTLFTPEEKKYLIEEATK--EMP--NVRVIMQET------ 72 (171)
T ss_dssp CCTTCCHHHHHHHH----HHHTTC---SEEEEEEEC------CCCHHHHHHHHHHHHT--TCT--TEEEEEECS------
T ss_pred EccccCHHHHHHHH----HHHHHC---CCeEEEEecCCCCCCCCCHHHHHHHHHHHHc--cCC--CEEEeeCCC------
Confidence 89999999999986 455653 5677777666667778999999999998776 233 4444 5554
Q ss_pred ChhHHHHHHHHHHhcCCcEEEecCC
Q 015787 330 GPTEVQWHAKARINAGANFYIVGRD 354 (400)
Q Consensus 330 GPREallHAiiRkNyGcThfIVGRD 354 (400)
|-. .. . .+.++++.||.|=|
T Consensus 73 ~~t---vd-~-~~~l~~~~~i~G~~ 92 (171)
T 3nd5_A 73 QLT---VE-S-AKSLGANFLIRGIR 92 (171)
T ss_dssp SCH---HH-H-HHHHTCCEEEEEEC
T ss_pred CcH---HH-H-HHHCCCCEEEECCC
Confidence 211 11 1 24458889999944
No 23
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=94.49 E-value=0.13 Score=45.20 Aligned_cols=89 Identities=16% Similarity=0.144 Sum_probs=55.8
Q ss_pred eCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEe-cccCC--CCCCCCChHHHHHHHHHHHHcCCCCCCcEEEEeCCCCCC
Q 015787 251 LRNPVHNGHALLMTDTRRRLLEMGYQNPILLLH-PLGGY--TKADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPMH 327 (400)
Q Consensus 251 tRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~-PlvG~--tK~dDi~~~~R~r~ye~ll~~~y~p~~~~~l~~lp~~mr 327 (400)
|.||+|+||..|++. |.+.. +-+.+. |.--. +|...++.+.|++-.+..+++ + |. .+.+. +.+..
T Consensus 8 sFdp~H~GH~~l~~~----a~~~~---d~v~v~v~~~~~p~~~~~~~~~~~R~~m~~~~~~~-~-~~-~v~v~--~~d~l 75 (168)
T 1f9a_A 8 RFQPFHKGHLEVIKK----IAEEV---DEIIIGIGSAQKSHTLENPFTAGERILMITQSLKD-Y-DL-TYYPI--PIKDI 75 (168)
T ss_dssp CCTTCCHHHHHHHHH----HTTTC---SEEEEEECSTTCCSSSSCCSCHHHHHHHHHHHHTT-S-SC-EEEEE--ECCCC
T ss_pred ecCCcCHHHHHHHHH----HHHhC---CeEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHhc-C-CC-ceEEE--eeCCc
Confidence 899999999999863 45542 445443 33321 244568999999999988873 2 42 33222 22333
Q ss_pred CCChhHHHHHHHHH-HhcCCcEEEecCC
Q 015787 328 YAGPTEVQWHAKAR-INAGANFYIVGRD 354 (400)
Q Consensus 328 yAGPREallHAiiR-kNyGcThfIVGRD 354 (400)
+. +..|+..++ ..+.|+.+++||+
T Consensus 76 ~~---~~~w~~~~~~~~~~~~~~~~~~~ 100 (168)
T 1f9a_A 76 EF---NSIWVSYVESLTPPFDIVYSGNP 100 (168)
T ss_dssp SC---GGGHHHHHHHHSCCCSEEECCCH
T ss_pred cc---HHHHHHHHHHhccCCCEEEECcH
Confidence 22 246887554 4567888888875
No 24
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=94.23 E-value=0.16 Score=48.74 Aligned_cols=99 Identities=20% Similarity=0.285 Sum_probs=63.0
Q ss_pred eEEee-eCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccCC---CCCCCCChHHHHHHHHHHHHcCCCCCCcEEEEe
Q 015787 246 VFAFQ-LRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGY---TKADDVPLSWRMKQHEKVLEDGVLDPETTVVSI 321 (400)
Q Consensus 246 VvAfQ-tRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG~---tK~dDi~~~~R~r~ye~ll~~~y~p~~~~~l~~ 321 (400)
+.-|= |-||+|.||..|++. |++.. +-+++-+.... +|..-++.+.|++-.+..+++.-+|..++.+..
T Consensus 9 ~~i~~GtFdP~h~GHl~~~~~----a~~~~---d~~~~~v~~~~~~~~~~~~~~~~~R~~m~~~~~~~~~~~~~~~~~~~ 81 (352)
T 2qjt_B 9 ISVFIGRFQPFHKGHLHNIII----ALQNS---KKVIINIGSCFNTPNIKNPFSFEQRKQMIESDLQVAGIDLDTVVIEP 81 (352)
T ss_dssp EEEEEECCTTCCHHHHHHHHH----HHHSE---EEEEEEEEEESCCCCSSSCSCHHHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred EEEEEEecCCCChHHHHHHHH----HHHhC---CcEEEEECCCCCCcccCCCCCHHHHHHHHHHHhccccCccceEEEEE
Confidence 43444 899999999999863 45552 44555444332 455668999999999998875445656766665
Q ss_pred CCCCCCCCChhHHHHHHHHHHh------cCCcEEEecCCC
Q 015787 322 FPSPMHYAGPTEVQWHAKARIN------AGANFYIVGRDP 355 (400)
Q Consensus 322 lp~~mryAGPREallHAiiRkN------yGcThfIVGRDH 355 (400)
++... + + ..+|...+++. +.++..++|+..
T Consensus 82 ~~d~~-~-~--~~~~~~~~~~~~~~~~~~~~~~~~ig~~~ 117 (352)
T 2qjt_B 82 LADYF-Y-Q--EQKWQDELRKNVYKHAKNNNSIAIVGHIK 117 (352)
T ss_dssp EECCT-T-C--HHHHHHHHHHHHTTTSCSSCCEEECCBSS
T ss_pred cCCCc-C-C--hHHHHHHHHHHHHHhcccCCeEEEEcCCC
Confidence 54322 2 2 24676665543 235777888653
No 25
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=93.78 E-value=0.38 Score=43.54 Aligned_cols=81 Identities=16% Similarity=0.063 Sum_probs=57.3
Q ss_pred eeCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCCCCCChHHHHHHHHHHHHcCCCCCCcEEEEeCCCCCCCC
Q 015787 250 QLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYA 329 (400)
Q Consensus 250 QtRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG~tK~dDi~~~~R~r~ye~ll~~~y~p~~~~~l~~lp~~mryA 329 (400)
=|-||+|.||..++++ |.+.. +-|++-|..-+.|..-++.+-|++-.+..++ .+| .+.+..+.
T Consensus 28 GsFDPiH~GHl~ii~~----A~~~~---D~Viv~v~~np~K~~~~s~eeR~~mv~~a~~--~~~--~v~V~~~e------ 90 (177)
T 3nbk_A 28 GSFDPVTLGHVDIFER----AAAQF---DEVVVAILVNPAKTGMFDLDERIAMVKESTT--HLP--NLRVQVGH------ 90 (177)
T ss_dssp ECCTTCCHHHHHHHHH----HHHHS---SEEEEEECCCTTSCCSSCHHHHHHHHHHHCT--TCT--TEEEEECC------
T ss_pred EeeCCCCHHHHHHHHH----HHHHC---CEEEEEEcCCCCCCCCCCHHHHHHHHHHHhC--CCC--CEEEEecC------
Confidence 3999999999999864 45553 5688878776778888999999999988776 233 35455443
Q ss_pred ChhHHHHHHHHHHhcCCcEEEec
Q 015787 330 GPTEVQWHAKARINAGANFYIVG 352 (400)
Q Consensus 330 GPREallHAiiRkNyGcThfIVG 352 (400)
|- +.+ ..+.+|++.+|-|
T Consensus 91 ~l---~vd--~~~~~~a~~ivrG 108 (177)
T 3nbk_A 91 GL---VVD--FVRSCGMTAIVKG 108 (177)
T ss_dssp SC---HHH--HHHHTTCCEEEEE
T ss_pred ch---HHH--HHHHcCCCEEEEC
Confidence 41 222 3355899988865
No 26
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A*
Probab=93.75 E-value=0.2 Score=44.26 Aligned_cols=81 Identities=19% Similarity=0.172 Sum_probs=56.8
Q ss_pred eCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCCCCCChHHHHHHHHHHHHcCCCCCCcEEEEeCCCCCCCCC
Q 015787 251 LRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAG 330 (400)
Q Consensus 251 tRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG~tK~dDi~~~~R~r~ye~ll~~~y~p~~~~~l~~lp~~mryAG 330 (400)
|-||+|.||..+++ .|.+.+ +-|++-+..-+.|..-++.+-|++..+..++ .. +.+.+..+ .|
T Consensus 10 sFDPiH~GHl~ii~----~A~~~~---D~viv~v~~~~~K~~~~~~~eR~~ml~~a~~--~~--~~v~v~~~------~~ 72 (157)
T 3nv7_A 10 TFDPVTNGHIDIIH----RSSELF---EKLIVAVAHSSAKNPMFSLDERLKMIQLATK--SF--KNVECVAF------EG 72 (157)
T ss_dssp CCTTCCHHHHHHHH----HHHTTS---SEEEEEEECCGGGCCSSCHHHHHHHHHHHHT--TS--TTEEEEEE------CS
T ss_pred EcCCCCHHHHHHHH----HHHHhC---CceEEEEccCCCCCCCCCHHHHHHHHHHHhc--CC--CcEEEEec------Cc
Confidence 89999999999986 456664 5566665555567778999999999998886 23 34444433 23
Q ss_pred hhHHHHHHHHHHhcCCcEEEecC
Q 015787 331 PTEVQWHAKARINAGANFYIVGR 353 (400)
Q Consensus 331 PREallHAiiRkNyGcThfIVGR 353 (400)
++-. ..+.+|++.+|-|=
T Consensus 73 ----l~~~-~~~~~~~~~ivrG~ 90 (157)
T 3nv7_A 73 ----LLAY-LAKEYHCKVLVRGL 90 (157)
T ss_dssp ----CHHH-HHHHTTCCCBCCCC
T ss_pred ----hHHH-HHHHcCCCEEEECC
Confidence 2322 34567999888883
No 27
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=93.32 E-value=0.37 Score=45.12 Aligned_cols=99 Identities=21% Similarity=0.310 Sum_probs=59.8
Q ss_pred ceEEee-eCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccCC-CC-CCCCChHHHHHHHHHHHHcCCCCCCcEEEEe
Q 015787 245 AVFAFQ-LRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGY-TK-ADDVPLSWRMKQHEKVLEDGVLDPETTVVSI 321 (400)
Q Consensus 245 ~VvAfQ-tRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG~-tK-~dDi~~~~R~r~ye~ll~~~y~p~~~~~l~~ 321 (400)
+|+-|- |-||+|.||..|++.|.+.+ + -+.+++.|.... .| ..-++.+.|++-.+..++ + .| .+.+.
T Consensus 24 ~i~i~~GsFdPiH~GHl~li~~a~~~~---~--ld~v~v~~~~~~p~K~~~~~~~~~R~~ml~~a~~-~-~~--~v~v~- 93 (242)
T 1yum_A 24 RIGLFGGTFDPVHIGHMRSAVEMAEQF---A--LDELRLLPNARPPHRETPQVSAAQRLAMVERAVA-G-VE--RLTVD- 93 (242)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHHH---T--CSEEEEEECCCCGGGSCTTCCHHHHHHHHHHHHT-T-CT--TEEEC-
T ss_pred eEEEEEeeCcHhhHHHHHHHHHHHHHc---C--CCEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHhc-C-CC--eEEEe-
Confidence 454444 99999999999987543322 1 245777666553 45 356899999999987776 2 23 44443
Q ss_pred CCCCCCCCChhHHHH-HHHHHHhcCCc---EEEecCC
Q 015787 322 FPSPMHYAGPTEVQW-HAKARINAGAN---FYIVGRD 354 (400)
Q Consensus 322 lp~~mryAGPREall-HAiiRkNyGcT---hfIVGRD 354 (400)
+....-.||.-.+= =..+++.||.+ .||+|-|
T Consensus 94 -~~e~~~~~~sytvdtl~~l~~~~~p~~~~~fI~G~D 129 (242)
T 1yum_A 94 -PRELQRDKPSYTIDTLESVRAELAADDQLFMLIGWD 129 (242)
T ss_dssp -CGGGGSSSSCCHHHHHHHHHHHSCTTCEEEEEEEHH
T ss_pred -eeeecCCCCCCHHHHHHHHHHHhCCCCcEEEEEehh
Confidence 43443445432221 12356677666 5777764
No 28
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=93.06 E-value=0.44 Score=39.45 Aligned_cols=88 Identities=15% Similarity=0.206 Sum_probs=51.7
Q ss_pred eEEeeeCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccC-----CCCCCCCChHHHHHHHHHHHHcCCCCCCcEEEE
Q 015787 246 VFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGG-----YTKADDVPLSWRMKQHEKVLEDGVLDPETTVVS 320 (400)
Q Consensus 246 VvAfQtRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG-----~tK~dDi~~~~R~r~ye~ll~~~y~p~~~~~l~ 320 (400)
++..=+-||+|+||..|++. |.+.+ +-+.+-+... ..+..-++.+-|++-.++ + +.. +.++..
T Consensus 4 ~~~~G~FDp~H~GH~~li~~----a~~~~---d~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~-~--~~~--d~v~~~ 71 (129)
T 1coz_A 4 VITYGTFDLLHWGHIKLLER----AKQLG---DYLVVAISTDEFNLQKQKKAYHSYEHRKLILET-I--RYV--DEVIPE 71 (129)
T ss_dssp EEEEECCCSCCHHHHHHHHH----HHTTS---SEEEEEEECHHHHHHHTCCCSSCHHHHHHHHTT-B--TTC--CEEEEE
T ss_pred EEEEEeCCCCCHHHHHHHHH----HHHhC---CCeEEEEECCHHHhcCCCCCCCCHHHHHHHHHh-c--CCC--CEEEeC
Confidence 44445899999999999873 45553 3344443321 123456788999886653 2 122 344322
Q ss_pred eCCCCCCCCChhHHHHHHHHHHhcCCcEEEecCCCC
Q 015787 321 IFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPA 356 (400)
Q Consensus 321 ~lp~~mryAGPREallHAiiRkNyGcThfIVGRDHA 356 (400)
+ .+.+-+ .. + +.++++++|+|-|..
T Consensus 72 -----~---~~~~~~-~~-l-~~~~~~~iv~G~D~~ 96 (129)
T 1coz_A 72 -----K---NWEQKK-QD-I-IDHNIDVFVMGDDWE 96 (129)
T ss_dssp -----C---CSTTHH-HH-H-HHTTCSEEEEEGGGT
T ss_pred -----C---CHHHHH-HH-H-HHhCCcEEEECCCCC
Confidence 1 122222 22 4 457999999999874
No 29
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=93.00 E-value=0.25 Score=49.40 Aligned_cols=95 Identities=22% Similarity=0.219 Sum_probs=56.3
Q ss_pred CCceEEeeeCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEec--c--cCCCCCCCCChHHHHHHHHHHHHcCCCCCCcEE
Q 015787 243 ADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHP--L--GGYTKADDVPLSWRMKQHEKVLEDGVLDPETTV 318 (400)
Q Consensus 243 w~~VvAfQtRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~P--l--vG~tK~dDi~~~~R~r~ye~ll~~~y~p~~~~~ 318 (400)
-++|+++=.-||+|+||.+|++.+ .+.+ ..+.|-+ . +....+--++.+.|.+-.+.. | -|.++
T Consensus 52 ~~~v~~lG~FDg~H~GHq~lI~~a----~~~~---~~~~Vms~~~~~vqrg~~~l~~~~~R~~~~~~~---G---vD~vi 118 (357)
T 3gmi_A 52 DKIVCDFTEYNPLHKGHKYALEKG----KEHG---IFISVLPGPLERSGRGIPYFLNRYIRAEMAIRA---G---ADIVV 118 (357)
T ss_dssp CCEEEEECCCTTCCHHHHHHHHHH----HTSS---EEEEEECCTTSBCTTSSBCSSCHHHHHHHHHHH---T---CSEEE
T ss_pred CCEEEEEEecCccCHHHHHHHHHH----HHcC---CeEEEEcCchHHhcCCCCcCCCHHHHHHHHHHC---C---CCEEE
Confidence 357889999999999999999744 3321 1122211 1 222223445667787755543 2 23333
Q ss_pred EEeCCCCCCCCChhHHHHHH-HHHHhcCCcEEEecC
Q 015787 319 VSIFPSPMHYAGPTEVQWHA-KARINAGANFYIVGR 353 (400)
Q Consensus 319 l~~lp~~mryAGPREallHA-iiRkNyGcThfIVGR 353 (400)
.+|..+. -.|-|-+-.| .+-+.+||.+++||-
T Consensus 119 --elpF~~~-~s~~~Fv~~~v~ll~~l~~~~iv~G~ 151 (357)
T 3gmi_A 119 --EGPPMGI-MGSGQYMRCLIKMFYSLGAEIIPRGY 151 (357)
T ss_dssp --ECCCGGG-SCHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred --EcCchhh-CCHHHHHHHHHHHHHHcCCCEEEECC
Confidence 3555433 5666643332 233589999999998
No 30
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=92.51 E-value=0.52 Score=40.29 Aligned_cols=88 Identities=14% Similarity=0.154 Sum_probs=52.6
Q ss_pred CceEEeeeCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccC-----CCCCCCCChHHHHHHHHHHHHcCCCCCCcEE
Q 015787 244 DAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGG-----YTKADDVPLSWRMKQHEKVLEDGVLDPETTV 318 (400)
Q Consensus 244 ~~VvAfQtRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG-----~tK~dDi~~~~R~r~ye~ll~~~y~p~~~~~ 318 (400)
++|++.=+-||+|+||..|++. |.+.+ +-+.+-.... ..+.--.+.+-|++..+.+ + .-+.++
T Consensus 3 ~~v~~~G~FD~vH~GH~~li~~----a~~~~---~~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~---~--~vd~v~ 70 (143)
T 3glv_A 3 IRVMATGVFDILHLGHIHYLKE----SKKLG---DELVVVVARDSTARNNGKIPIFDENSRLALISEL---K--VVDRAI 70 (143)
T ss_dssp CEEEEEECCSSCCHHHHHHHHH----HHTTS---SEEEEEECCHHHHHHTTCCCSSCHHHHHHHHTTB---T--TCSEEE
T ss_pred eEEEEEeecCCCCHHHHHHHHH----HHHhC---CCcEEEEECCcchhhcCCCCCCCHHHHHHHHHhc---C--CCCEEE
Confidence 4566777999999999999874 45553 2233211111 1233457888898855542 2 124444
Q ss_pred EEeCCCCCCCCChhHHHHHHHHHHhcCCcEEEecCCC
Q 015787 319 VSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDP 355 (400)
Q Consensus 319 l~~lp~~mryAGPREallHAiiRkNyGcThfIVGRDH 355 (400)
+. .|.+- .. ++ +.+++.++++|-|+
T Consensus 71 ~~---------~~~~f-~~-~~-~~l~~~~iv~G~d~ 95 (143)
T 3glv_A 71 LG---------HEGDM-MK-TV-IEVKPDIITLGYDQ 95 (143)
T ss_dssp EC---------CTTCH-HH-HH-HHHCCSEEEECTTC
T ss_pred Ec---------CchhH-HH-HH-HhcCCCEEEECCCC
Confidence 31 23332 22 33 57999999999885
No 31
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=92.14 E-value=0.62 Score=45.32 Aligned_cols=92 Identities=12% Similarity=0.064 Sum_probs=55.5
Q ss_pred eEEee-eCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccCCC------C----CCCCChHHHHHHHHHHHHcCCCCC
Q 015787 246 VFAFQ-LRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYT------K----ADDVPLSWRMKQHEKVLEDGVLDP 314 (400)
Q Consensus 246 VvAfQ-tRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG~t------K----~dDi~~~~R~r~ye~ll~~~y~p~ 314 (400)
+..|- |-||+|.||..++++ |.+. ++-|+|-|..-+. | ..-++.+.|++-.+..++ .+|.
T Consensus 4 ~~i~~GtFdP~h~GHl~~~~~----a~~~---~d~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~R~~m~~~~~~--~~~~ 74 (365)
T 1lw7_A 4 VGVIFGKFYPVHTGHINMIYE----AFSK---VDELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQQIFK--YQKN 74 (365)
T ss_dssp EEEEEECCSSCCHHHHHHHHH----HHTT---CSEEEEEEEECHHHHHHHHHHTTCSSCCCHHHHHHHHHHHTS--TTTT
T ss_pred EEEEEEeeCCCCHHHHHHHHH----HHHH---CCEEEEEECCCCccccccccccccCCCCCHHHHHHHHHHHhh--cCCC
Confidence 43344 899999999999863 5555 3668777765543 1 224999999999988776 3443
Q ss_pred CcEEEEeC---CCCCCCC-Ch--hHHHHHHHHHH-hcCCcE
Q 015787 315 ETTVVSIF---PSPMHYA-GP--TEVQWHAKARI-NAGANF 348 (400)
Q Consensus 315 ~~~~l~~l---p~~mryA-GP--REallHAiiRk-NyGcTh 348 (400)
++.+..+ +.+. |+ +- .+..+..+++. ...++.
T Consensus 75 -~~~v~~~~~~~~~~-y~~~~~~~~~~~~~~i~~~~~~~~~ 113 (365)
T 1lw7_A 75 -QIFIHHLVEDGIPS-YPNGWQSWSEAVKTLFHEKHFEPSI 113 (365)
T ss_dssp -TEEEEEEECSSSCC-TTSCHHHHHHHHHHHHHHTTCCCSE
T ss_pred -cEEEEEeccCCCCC-CchHHHHHHHHHHHHhhccCCCCcE
Confidence 2333332 1111 21 10 34556667775 455554
No 32
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=90.70 E-value=0.57 Score=45.43 Aligned_cols=96 Identities=20% Similarity=0.153 Sum_probs=57.9
Q ss_pred eEEeeeCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEe----c-ccCCC-CCCCCChHHHHHHHHHHHHcCCCCCCcEEE
Q 015787 246 VFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLH----P-LGGYT-KADDVPLSWRMKQHEKVLEDGVLDPETTVV 319 (400)
Q Consensus 246 VvAfQtRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~----P-lvG~t-K~dDi~~~~R~r~ye~ll~~~y~p~~~~~l 319 (400)
|++.=+-+.+|+||..|++.|.+.|.+.+.. .+++. | ++.+. ..--.+.+.|++..++ +- .+++
T Consensus 2 vvtiG~FDgvH~GH~~ll~~a~~~a~~~~~~--~vVvtFdphP~~l~~~~~~~l~~~~eR~~ll~~------lg--~~~v 71 (293)
T 1mrz_A 2 VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDD--SLIYTISYPPEYFLPDFPGLLMTVESRVEMLSR------YA--RTVV 71 (293)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHHHHHTCC--CEEEEESSCGGGGSTTCCCBSSCHHHHHHHHTT------TS--CEEE
T ss_pred EEEEeeCccccHHHHHHHHHHHHHHHHcCCe--EEEEEecCCHHHhCCCCCCCCCCHHHHHHHHHh------CC--CEEE
Confidence 5566678999999999999887777666422 23442 3 33322 1225677888874443 22 3333
Q ss_pred EeCCCCCCCCChhHHHHHHHHHHhcCCcEEEecCCCC
Q 015787 320 SIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPA 356 (400)
Q Consensus 320 ~~lp~~mryAGPREallHAiiRkNyGcThfIVGRDHA 356 (400)
..| ..+.--.| |.....++ +++.+++||-|+.
T Consensus 72 ~~F-~~~a~ls~-~~Fi~~il---l~~~~iVvG~Df~ 103 (293)
T 1mrz_A 72 LDF-FRIKDLTP-EGFVERYL---SGVSAVVVGRDFR 103 (293)
T ss_dssp ECH-HHHTTCCH-HHHHHHHC---TTCCEEEEETTCC
T ss_pred EEh-HHhhcCCH-HHHHHHHh---cCCCEEEECCCCC
Confidence 333 22222244 34444444 9999999999975
No 33
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=88.77 E-value=0.45 Score=42.64 Aligned_cols=116 Identities=15% Similarity=0.170 Sum_probs=63.9
Q ss_pred ceEEee-eCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccC-CCCCCCCChHHHHHHHHHHHHcCCCCCCcEEEEeC
Q 015787 245 AVFAFQ-LRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGG-YTKADDVPLSWRMKQHEKVLEDGVLDPETTVVSIF 322 (400)
Q Consensus 245 ~VvAfQ-tRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG-~tK~dDi~~~~R~r~ye~ll~~~y~p~~~~~l~~l 322 (400)
+|.-|- |-||+|.||..+.+ |++. .+-+++.|... +.|.+-++.+.|++-.+..+++ .|...+.+.-+
T Consensus 3 ~igi~gGsFdPih~GHl~i~~-----a~~~---~d~v~~~p~~~~~~k~~~~~~~~R~~m~~~a~~~--~~~~~~~v~~~ 72 (177)
T 3h05_A 3 KIAIFGSAFNPPSLGHKSVIE-----SLSH---FDLVLLEPSIAHAWGKNMLDYPIRCKLVDAFIKD--MGLSNVQRSDL 72 (177)
T ss_dssp EEEEEEECCSSCCHHHHHHHT-----TCTT---SSEEEEEECC-------CCCHHHHHHHHHHHHHH--HCCTTEEECCH
T ss_pred EEEEEEeccchhhHHHHHHHH-----HHHH---CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHhc--CCCCcEEEEeh
Confidence 343444 89999999999963 2332 25677777652 4466779999999999988873 34335545433
Q ss_pred CCCCCCCC-hh--HHHHHHHHHHhcCCc--EEEecCCCC-CCCCCCCCCCCCCCchhhhHhhhC
Q 015787 323 PSPMHYAG-PT--EVQWHAKARINAGAN--FYIVGRDPA-GMGHPVEKRDLYDADHGKKVLSMA 380 (400)
Q Consensus 323 p~~mryAG-PR--EallHAiiRkNyGcT--hfIVGRDHA-GvG~~~~~~~~Yd~~~aq~i~~~~ 380 (400)
.....-.| |. =-.+.. +++.|.-. .||+|-|.. +.. ..| +.++|++.+
T Consensus 73 E~~l~~~~~~syT~dTl~~-l~~~~p~~~~~~iiG~D~l~~l~------~W~---~~~~l~~~~ 126 (177)
T 3h05_A 73 EQALYQPGQSVTTYALLEK-IQEIYPTADITFVIGPDNFFKFA------KFY---KAEEITERW 126 (177)
T ss_dssp HHHHC----CCCHHHHHHH-HHHHSTTSEEEEEECHHHHHTGG------GST---THHHHHHHS
T ss_pred hhhcccCCCCcchHHHHHH-HHHHhcCCCeEEEEecchhhhcc------cch---hHHHHHHhC
Confidence 32210112 31 112333 34556443 489999843 443 344 356777654
No 34
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=86.99 E-value=0.53 Score=44.76 Aligned_cols=96 Identities=15% Similarity=0.111 Sum_probs=51.9
Q ss_pred EeeeCCCCchhHHHHHHHHHHHHHHhcCCCCcEEE-ecccC-C-CCCCCCChHHHHHHHHHHHHcCCCCCCcEEEEeCCC
Q 015787 248 AFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLL-HPLGG-Y-TKADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPS 324 (400)
Q Consensus 248 AfQtRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll-~PlvG-~-tK~dDi~~~~R~r~ye~ll~~~y~p~~~~~l~~lp~ 324 (400)
..=+-||+|+||..|++. |++.. +-+.+ .|--. + +|..-++.+.|++-.+..+.+ ++.+++.+.++.-
T Consensus 12 ~~G~FdP~H~GH~~li~~----a~~~~---d~v~v~v~~~~~p~~~~~~~~~~~R~~m~~~~~~~--~~~~~~~~i~~~d 82 (341)
T 2qjo_A 12 YIGRFQPFHLGHLRTLNL----ALEKA---EQVIIILGSHRVAADTRNPWRSPERMAMIEACLSP--QILKRVHFLTVRD 82 (341)
T ss_dssp EEECCTTCCHHHHHHHHH----HHHHE---EEEEEEEEEETCCCCSSSCSCHHHHHHHHHTTSCH--HHHTTEEEEEEEC
T ss_pred EEEEeCCCCHHHHHHHHH----HHHhC---CeEEEEECCcccCCCCCCCCCHHHHHHHHHHHhhh--ccCCeEEEEECCC
Confidence 333899999999999874 44442 22332 33221 1 344568999998866654431 1223454444432
Q ss_pred CCCCCChhHHHHHHHHH---Hhc---CCcEEEecCCCC
Q 015787 325 PMHYAGPTEVQWHAKAR---INA---GANFYIVGRDPA 356 (400)
Q Consensus 325 ~mryAGPREallHAiiR---kNy---GcThfIVGRDHA 356 (400)
. .++- ..|+.-++ +.+ +|+..++|.|..
T Consensus 83 ~-~~~~---~~w~~~~~~l~~~l~r~~~~~~~~g~~~~ 116 (341)
T 2qjo_A 83 W-LYSD---NLWLAAVQQQVLKITGGSNSVVVLGHRKD 116 (341)
T ss_dssp C-TTCH---HHHHHHHHHHHHHHHTTCSCEEEEECCCS
T ss_pred C-cCCh---HHHHHHHHHHhHHhcCCCceEEEEcCCCC
Confidence 2 1111 23333321 222 289999998873
No 35
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=85.20 E-value=0.96 Score=39.36 Aligned_cols=70 Identities=16% Similarity=0.293 Sum_probs=45.1
Q ss_pred eCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccCCC--C--CCCCChHHHHHHHHHHH-HcCCCCCCcEEEEeCCCC
Q 015787 251 LRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYT--K--ADDVPLSWRMKQHEKVL-EDGVLDPETTVVSIFPSP 325 (400)
Q Consensus 251 tRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG~t--K--~dDi~~~~R~r~ye~ll-~~~y~p~~~~~l~~lp~~ 325 (400)
|-||+|.||..+.+.| .+.+ .+-|++-|..... | ..-++.+.|++-.+.++ ++ + .+ ++.+..+.-
T Consensus 8 tFDPiH~GHl~l~~~a----~~~~--~d~viv~v~~~~~~~k~~~~~~~~~~R~~ml~~a~~~~-~-~~-~~~i~~i~D- 77 (148)
T 3do8_A 8 TFEPLHEGHKKLIDVA----IKLG--GRDITIGVTSDRMARARIRSVLPFAIRAENVKRYVMRK-Y-GF-EPEIVKITN- 77 (148)
T ss_dssp CCSSCCHHHHHHHHHH----HHHH--TTCEEEEEECHHHHHHHSCCCSCHHHHHHHHHHHHHHH-H-SS-CCEEEEECS-
T ss_pred eCCCCCHHHHHHHHHH----HHhC--CCEEEEEECCCccccccCCCCCCHHHHHHHHHHHHhcc-c-CC-cEEEEeecC-
Confidence 8999999999998744 3432 1446666554432 3 45689999999999988 63 2 22 444544443
Q ss_pred CCCCChh
Q 015787 326 MHYAGPT 332 (400)
Q Consensus 326 mryAGPR 332 (400)
.| ||.
T Consensus 78 -~~-g~~ 82 (148)
T 3do8_A 78 -PY-GKT 82 (148)
T ss_dssp -TT-TTT
T ss_pred -CC-CCC
Confidence 23 665
No 36
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=84.49 E-value=1.3 Score=43.44 Aligned_cols=101 Identities=17% Similarity=0.194 Sum_probs=62.5
Q ss_pred CceEEeeeCCCCchhHHHHHHHHHHHHHHhcCCCCcEEE----ecc--cCC---CC-CCCCChHHHHHHHHHHHHcCCCC
Q 015787 244 DAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLL----HPL--GGY---TK-ADDVPLSWRMKQHEKVLEDGVLD 313 (400)
Q Consensus 244 ~~VvAfQtRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll----~Pl--vG~---tK-~dDi~~~~R~r~ye~ll~~~y~p 313 (400)
..|++.=+-+-+|+||..|++.+.+.|.+.|. +.+++ ||. +.+ .+ .--.+.+-|++..+.+ |
T Consensus 21 ~~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~--~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~~l---G--- 92 (308)
T 3op1_A 21 DSVVVLGYFDGIHKGHQELFRVANKAARKDLL--PIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKRE---G--- 92 (308)
T ss_dssp CEEEEESCCSSCCHHHHHHHHHHHHHSSTTCC--CEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHHHH---T---
T ss_pred CeEEEEecCCcccHHHHHHHHHHHHHHHhcCC--ceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHHHc---C---
Confidence 46888889999999999999876665555432 22333 221 222 11 1235667787766653 2
Q ss_pred CCcEEEEeCCCCCCCC--ChhHHHHHHHHHHhcCCcEEEecCCCC
Q 015787 314 PETTVVSIFPSPMHYA--GPTEVQWHAKARINAGANFYIVGRDPA 356 (400)
Q Consensus 314 ~~~~~l~~lp~~mryA--GPREallHAiiRkNyGcThfIVGRDHA 356 (400)
-+.+++ +|..-.+| .|.| -..-++ +.+++.+++||-|+.
T Consensus 93 VD~v~~--~~F~~~~a~ls~e~-Fv~~ll-~~l~~~~ivvG~Dfr 133 (308)
T 3op1_A 93 VEELYL--LDFSSQFASLTAQE-FFATYI-KAMNAKIIVAGFDYT 133 (308)
T ss_dssp CCEEEE--ECCCHHHHTCCHHH-HHHHHH-HHHTEEEEEEETTCC
T ss_pred CCEEEE--ecCCHHHHcCCHHH-HHHHHH-HHcCCCEEEECcCCC
Confidence 344444 45544333 5654 344455 589999999999963
No 37
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=82.31 E-value=3.8 Score=38.23 Aligned_cols=59 Identities=22% Similarity=0.265 Sum_probs=38.8
Q ss_pred eCCCCchhHHHHHHHHHHHHHHhcCC-CCcEEEecccC-CCCCCCCChHHHHHHHHHHHHc
Q 015787 251 LRNPVHNGHALLMTDTRRRLLEMGYQ-NPILLLHPLGG-YTKADDVPLSWRMKQHEKVLED 309 (400)
Q Consensus 251 tRNPlHRaHe~l~r~~~~~ale~~~~-~~~Lll~PlvG-~tK~dDi~~~~R~r~ye~ll~~ 309 (400)
|-||+|+||..|++.|++.+-+.+.. .-++++.|... ..|..-++.+.|++-.+..+++
T Consensus 14 sFdPiH~GHl~l~~~a~~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~m~~~ai~~ 74 (252)
T 1nup_A 14 SFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGKKDLAASHHRVAMARLALQT 74 (252)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEECCTTCSSSCCCCHHHHHHHHHHHGGG
T ss_pred cCcHhhHHHHHHHHHHHHHhcccCCceEEEEEEeCCCCcccCCCCCCHHHHHHHHHHHhcC
Confidence 99999999999998765544332100 00134555432 3455678999999999888773
No 38
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=82.20 E-value=1 Score=43.43 Aligned_cols=40 Identities=18% Similarity=0.189 Sum_probs=32.0
Q ss_pred ccCCHHHHHHHHHhcCCCceEEee-eCCCCchhHHHHHHHH
Q 015787 227 FRLSPAQLRDEFSKRNADAVFAFQ-LRNPVHNGHALLMTDT 266 (400)
Q Consensus 227 ~r~tP~e~R~~f~~~gw~~VvAfQ-tRNPlHRaHe~l~r~~ 266 (400)
.-.|++|+|+..+.....+-+||. |=.-+|.||..|++.|
T Consensus 6 i~~ti~~lr~~~~~~~~g~~ig~VPTMGaLH~GHlsLv~~A 46 (264)
T 3n8h_A 6 IADNIKQFHSIRNSLIKQQKIGFVPTMGALHNGHISLIKKA 46 (264)
T ss_dssp EECSHHHHHHHHHTSCTTSCEEEEEECSSCCHHHHHHHHHH
T ss_pred EEcCHHHHHHHHHHHhCCCcEEEECCCcchhHHHHHHHHHH
Confidence 345899999998864334567888 9999999999999854
No 39
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=80.88 E-value=4 Score=36.02 Aligned_cols=54 Identities=15% Similarity=0.246 Sum_probs=36.2
Q ss_pred eeCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccCC-CC--CCCCChHHHHHHHHHHHH
Q 015787 250 QLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGY-TK--ADDVPLSWRMKQHEKVLE 308 (400)
Q Consensus 250 QtRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG~-tK--~dDi~~~~R~r~ye~ll~ 308 (400)
=+-||+|+||..|++.|.+. .+ .+-+++.|.... .| ..-++.+.|++-.+..++
T Consensus 9 GsFdp~H~GH~~l~~~a~~~---~~--~d~v~~~~~~~~~~k~~~~~~~~~~R~~m~~~a~~ 65 (189)
T 2h29_A 9 GQFNPIHTAHMIVASEVFHE---LQ--PDEFYFLPSFMSPLKKHHDFIDVQHRLTMIQMIID 65 (189)
T ss_dssp ECCTTCCHHHHHHHHHHHHH---HC--CSEEEEEECSBCTTSCCCSSCCCHHHHHHHHHHHH
T ss_pred ecCCcccHHHHHHHHHHHHH---cC--CCEEEEEECCCCCCCcCCCCCCHHHHHHHHHHHHc
Confidence 38999999999998754332 12 134554554333 34 335799999999997776
No 40
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=75.57 E-value=6.4 Score=37.54 Aligned_cols=76 Identities=18% Similarity=0.109 Sum_probs=45.7
Q ss_pred eCCCCchhHHHHHHHHHHHHHHhcC-CCCcEEEecccC-CCCCCCCChHHHHHHHHHHHHcCCCCCCcEEEEeCCCCCCC
Q 015787 251 LRNPVHNGHALLMTDTRRRLLEMGY-QNPILLLHPLGG-YTKADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPMHY 328 (400)
Q Consensus 251 tRNPlHRaHe~l~r~~~~~ale~~~-~~~~Lll~PlvG-~tK~dDi~~~~R~r~ye~ll~~~y~p~~~~~l~~lp~~mry 328 (400)
|-||+|.||..|++.|++.+-..+. ..-++++.|.-. +.|..-.+.+.|++-.+.+++ + . +.+.+ .+....-
T Consensus 16 sFDPiH~GHl~l~~~a~~~~~~d~~~~vvv~~f~P~~~~~~K~~l~s~~~R~~ml~~ai~-~-~--~~~~v--~~~E~~~ 89 (279)
T 1kqn_A 16 SFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHRVIMAELATK-N-S--KWVEV--DTWESLQ 89 (279)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCGGGCCTTCCCHHHHHHHHHHHTT-T-C--SSEEE--CCTGGGC
T ss_pred eecHhhHHHHHHHHHHHHHhcccCCceEEEEEEcCCCCCccccCCCCHHHHHHHHHHHhc-C-C--CcEEE--ecccccc
Confidence 9999999999999866544332110 000113445322 345567899999998887766 2 2 23444 4555555
Q ss_pred CChh
Q 015787 329 AGPT 332 (400)
Q Consensus 329 AGPR 332 (400)
.|+.
T Consensus 90 ~~~s 93 (279)
T 1kqn_A 90 KEWK 93 (279)
T ss_dssp SSCC
T ss_pred CCCC
Confidence 6663
No 41
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=72.93 E-value=14 Score=36.51 Aligned_cols=91 Identities=20% Similarity=0.168 Sum_probs=56.3
Q ss_pred CceEEeeeCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEe----cccCCCC-CCCCChHHHHHHHHHHHHcCCCCCCcEE
Q 015787 244 DAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLH----PLGGYTK-ADDVPLSWRMKQHEKVLEDGVLDPETTV 318 (400)
Q Consensus 244 ~~VvAfQtRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~----PlvG~tK-~dDi~~~~R~r~ye~ll~~~y~p~~~~~ 318 (400)
++|++.=+-+|+|.||..++++ |.+.+ +-|.+- |.+-..| +--++.+-|++..+++ . +.+ .++
T Consensus 8 ~~v~~~G~FD~lH~GH~~lL~~----A~~l~---d~LiVgV~~d~~v~~~K~~pi~s~eER~~~l~~l-~--~VD--~Vv 75 (341)
T 3elb_A 8 VRVWCDGCYDMVHYGHSNQLRQ----ARAMG---DYLIVGVHTDEEIAKHKGPPVFTQEERYKMVQAI-K--WVD--EVV 75 (341)
T ss_dssp CEEEEEECCCSCCHHHHHHHHH----HHHTS---SEEEEEECCHHHHHHHSSCCSSCHHHHHHHHHHB-T--TCC--EEE
T ss_pred eEEEEEeeCCCCCHHHHHHHHH----HHHhC---CcCEEEeecCHHHhccCCCCCCCHHHHHHHHHHc-C--CCC--EEE
Confidence 4577777999999999999874 55664 333322 2111112 3457889999988764 2 222 333
Q ss_pred EEeCCCCCCCCChhHHHHHHHHHHhcCCcEEEecCCCCC
Q 015787 319 VSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAG 357 (400)
Q Consensus 319 l~~lp~~mryAGPREallHAiiRkNyGcThfIVGRDHAG 357 (400)
++.- +.-|.|-+ +.++|..+++|-|+..
T Consensus 76 --~f~~---~~~~~efi------~~~~~d~vV~G~D~~~ 103 (341)
T 3elb_A 76 --PAAP---YVTTLETL------DKYNCDFCVHGNDITL 103 (341)
T ss_dssp --ETCC---SSCCHHHH------HHTTCSEEEECSCCCB
T ss_pred --ecCC---CCCHHHHH------HHhCCCEEEECCCCCC
Confidence 2211 12344442 6899999999999874
No 42
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0
Probab=69.17 E-value=1.5 Score=42.64 Aligned_cols=60 Identities=23% Similarity=0.292 Sum_probs=39.3
Q ss_pred cCCHHHHHHHHHhcCCCceEEee-eCCCCchhHHHHHHHHHHHHHHhc-CCCCcEEEecccCCCCCCCCC
Q 015787 228 RLSPAQLRDEFSKRNADAVFAFQ-LRNPVHNGHALLMTDTRRRLLEMG-YQNPILLLHPLGGYTKADDVP 295 (400)
Q Consensus 228 r~tP~e~R~~f~~~gw~~VvAfQ-tRNPlHRaHe~l~r~~~~~ale~~-~~~~~Lll~PlvG~tK~dDi~ 295 (400)
-.|++|+|+..++ .+-+||. |=.=+|+||..|++.| .+.. ...-.+++||+- -...+|++
T Consensus 8 ~~ti~~lr~~~~~---g~~ig~VPTMG~LH~GH~sLi~~A----~~~~d~vVvSifvnP~q-f~~~ed~~ 69 (283)
T 3uk2_A 8 ISSIQELRDQLRG---QNRTAFVPTMGNLHEGHLSLMRLA----RQHGDPVVASIFVNRLQ-FGPNEDFD 69 (283)
T ss_dssp ECCHHHHHHHTTT---CSSCEEEEECSSCCHHHHHHHHHH----HTTCSSEEEEECCCGGG-SCTTSCTT
T ss_pred EcCHHHHHHHHHc---CCeEEEECCCCcccHHHHHHHHHH----HHhCCEEEEEEcCCHHH-cCCccccc
Confidence 3589999999886 3456777 9999999999999854 3431 001135567764 33345643
No 43
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=58.54 E-value=20 Score=34.52 Aligned_cols=38 Identities=11% Similarity=0.127 Sum_probs=28.2
Q ss_pred cCCHHHHHHHHH---hcCCCceEEeeeCCCCchhHHHHHHHH
Q 015787 228 RLSPAQLRDEFS---KRNADAVFAFQLRNPVHNGHALLMTDT 266 (400)
Q Consensus 228 r~tP~e~R~~f~---~~gw~~VvAfQtRNPlHRaHe~l~r~~ 266 (400)
-.++.|+|+..+ +.| ++|+..=|-+-+|+||..|++.|
T Consensus 4 ~~~~~el~~~~~~~r~~g-~~V~~vgtfdgLH~GH~sLI~~A 44 (280)
T 2ejc_A 4 IETIEEMKKFSEEMREKK-KTIGFVPTMGYLHEGHLSLVRRA 44 (280)
T ss_dssp ECCHHHHHHHHHHHHHTT-CCEEEEEECSCCCHHHHHHHHHH
T ss_pred EeCHHHHHHHHHHHHhcC-CEEEEEcCCccccHHHHHHHHHH
Confidence 347888887544 323 46766679999999999999854
No 44
>3v67_A Sensor protein CPXA; PAS fold, signal sensing, signaling protein, merohedral twin; 2.30A {Vibrio parahaemolyticus}
Probab=53.58 E-value=5.2 Score=34.66 Aligned_cols=57 Identities=18% Similarity=0.215 Sum_probs=42.1
Q ss_pred CCCeEEEEcCCCcEEEEEEeCccccCCHHHHHHH--hhCCCCCCChhHHHHHHhcCCEEEeeeEEEec
Q 015787 151 ESTRVALVDSDDNVVAILNDIEIYKHPKEERIAR--TWGTTAPGLPYVDQAITYAGNWLIGGDLEVLE 216 (400)
Q Consensus 151 ~G~~vaL~d~eG~~vAiL~V~eif~~dk~~ea~~--vfGT~d~~HPgV~~~~~~~g~~~vgG~v~~l~ 216 (400)
+|.++-|+|.+|++++....++ -+-.|-+ ++-+++++||-.+ ..|+|.|.|++.+--
T Consensus 54 ~~~r~~l~d~eG~Il~~~~~~~-----~~~ralrnFi~~sd~~~~P~qk----~ygr~~i~GPf~i~l 112 (138)
T 3v67_A 54 PRPRVFFSDYNGNVLTTDKRSN-----FQLRAMQNFVTSIEDYNKPKQR----LYGRYMIAGPVPIVL 112 (138)
T ss_dssp CSCEEEEECTTSCEECCCCSCH-----HHHHHHHHHHHHCSCTTSCEEE----EETTEEEEEEEEEEE
T ss_pred CCccEEEEcCCCCEecCCcccc-----hhHHHHHHHHHhccCccCchhh----hhCcEEEeCCEEEEE
Confidence 5778999999999999776443 1113333 4467788899865 579999999998653
No 45
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=50.15 E-value=21 Score=35.07 Aligned_cols=39 Identities=21% Similarity=0.307 Sum_probs=28.5
Q ss_pred cCCHHHHHHHHHh-cCCCceEEee-eCCCCchhHHHHHHHH
Q 015787 228 RLSPAQLRDEFSK-RNADAVFAFQ-LRNPVHNGHALLMTDT 266 (400)
Q Consensus 228 r~tP~e~R~~f~~-~gw~~VvAfQ-tRNPlHRaHe~l~r~~ 266 (400)
-.|+.|+|+.... +...+-+||. |=.=+|.||..|++.|
T Consensus 25 i~t~~elr~~~~~~r~~g~~IgfVPTMG~LH~GHlsLi~~A 65 (314)
T 3inn_A 25 IHTIEELRQALAPARQQGKKIGFVPTMGYLHKGHLELVRRA 65 (314)
T ss_dssp ECSHHHHHHHHHHHHHTTCCEEEEEECSSCCHHHHHHHHHH
T ss_pred EcCHHHHHHHHHHHHHcCCeEEEEcCCCccCHHHHHHHHHH
Confidence 3479999988753 1112456776 8889999999999854
No 46
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=49.47 E-value=35 Score=32.91 Aligned_cols=37 Identities=11% Similarity=0.324 Sum_probs=24.2
Q ss_pred cCCHHHHHHHHH---hcCCCceEEee-eCCCCchhHHHHHHHH
Q 015787 228 RLSPAQLRDEFS---KRNADAVFAFQ-LRNPVHNGHALLMTDT 266 (400)
Q Consensus 228 r~tP~e~R~~f~---~~gw~~VvAfQ-tRNPlHRaHe~l~r~~ 266 (400)
-.|+.|+|+..+ +.| +-+||. |=.=+|+||..|++.+
T Consensus 5 ~~~~~~l~~~~~~~r~~g--~~I~fVpTmG~lH~GH~~LI~~a 45 (283)
T 3ag6_A 5 ITTVKEMQHIVKAAKRSG--TTIGFIPTMGALHDGHLTMVRES 45 (283)
T ss_dssp ECCHHHHHHHHHHHHHTT--CCEEEEEECSSCCHHHHHHHHHH
T ss_pred EcCHHHHHHHHHHHHhcC--CcEEEEECCccccHHHHHHHHHH
Confidence 347889987543 322 345663 4333999999999743
No 47
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=45.54 E-value=31 Score=33.95 Aligned_cols=85 Identities=13% Similarity=0.056 Sum_probs=52.3
Q ss_pred eCCCCchhHHHHHHHHHHHHHHhcCCCCc-EEEecccC-----CCC---CCCCChHHHHHHHHHHHHcCCCCCCcEEEEe
Q 015787 251 LRNPVHNGHALLMTDTRRRLLEMGYQNPI-LLLHPLGG-----YTK---ADDVPLSWRMKQHEKVLEDGVLDPETTVVSI 321 (400)
Q Consensus 251 tRNPlHRaHe~l~r~~~~~ale~~~~~~~-Lll~PlvG-----~tK---~dDi~~~~R~r~ye~ll~~~y~p~~~~~l~~ 321 (400)
|-+|+|.||..+++ .|.+++ +. -||.-+.- ..| .--++.+-|+.+.+++ . |.+ .|++.
T Consensus 206 sFD~~h~GHl~~L~----rA~~l~---D~~~LiVgV~~d~~v~~~Kg~~~pi~~~~ER~~~v~~~-~--~vd--~V~v~- 272 (341)
T 3elb_A 206 AFDLFHIGHVDFLE----KVHRLA---ERPYIIAGLHFDQEVNHYKGKNYPIMNLHERTLSVLAC-R--YVS--EVVIG- 272 (341)
T ss_dssp CCTTCCHHHHHHHH----HHHTTS---SSEEEEEEEECHHHHHHHHCTTCCSSCHHHHHHHHHTB-T--TCC--EEEEE-
T ss_pred ccCCCCHHHHHHHH----HHHHhC---CCCEEEEEEccCHhhHhhcCCCCCCCCHHHHHHHHHHc-C--CCC--CEEEC-
Confidence 99999999999987 456664 41 22222222 123 2368999999988864 3 443 44442
Q ss_pred CCCCCCCCChhHHHHHHHHHHhcCCcEEEecCCCCCC
Q 015787 322 FPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGM 358 (400)
Q Consensus 322 lp~~mryAGPREallHAiiRkNyGcThfIVGRDHAGv 358 (400)
-|+ +... =+.+.+||+-++-|-|+...
T Consensus 273 ~~~-----~l~~-----~~~~~~~~~~iv~G~d~~~~ 299 (341)
T 3elb_A 273 APY-----AVTA-----ELLSHFKVDLVCHGKTEIIP 299 (341)
T ss_dssp ECS-----SCCH-----HHHHHTTCSEEEECSSCCCC
T ss_pred CCC-----cchH-----HHHHhcCCcEEEECCCCccc
Confidence 111 1211 12356799999999987654
No 48
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=44.18 E-value=27 Score=33.85 Aligned_cols=56 Identities=14% Similarity=0.206 Sum_probs=35.3
Q ss_pred cCCHHHHHHHHHh-cCCCceEEee-eCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCC
Q 015787 228 RLSPAQLRDEFSK-RNADAVFAFQ-LRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTK 290 (400)
Q Consensus 228 r~tP~e~R~~f~~-~gw~~VvAfQ-tRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG~tK 290 (400)
-.|++|+|+.... +...+-+||. |=.-+|.||..|++. |.+. ++.+++.--|.+++
T Consensus 7 ~~t~~elr~~~~~~r~~g~~IgfVPTMG~LH~GHlsLv~~----Ar~~---~d~vVVSIFVNP~Q 64 (287)
T 3q12_A 7 IETLPLLRQQIRRWRQEGKRIALVPTMGNLHEGHMTLVDE----AKTR---ADVVVVTIFVNPLQ 64 (287)
T ss_dssp ECSHHHHHHHHHHHHHTTCCEEEEEECSSCCHHHHHHHHH----HHTT---SSEEEEEECCCGGG
T ss_pred ECCHHHHHHHHHHHHHcCCeEEEEcCCCcccHHHHHHHHH----HHHh---CCEEEEEeccCccc
Confidence 3589999988753 1112456776 878899999999974 3444 35444443344443
No 49
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=41.59 E-value=16 Score=34.48 Aligned_cols=107 Identities=15% Similarity=0.091 Sum_probs=60.0
Q ss_pred cCCHHHHHHHHHhcCCCceEEeeeCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccCC----CC-CCCCChHHHHHH
Q 015787 228 RLSPAQLRDEFSKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGY----TK-ADDVPLSWRMKQ 302 (400)
Q Consensus 228 r~tP~e~R~~f~~~gw~~VvAfQtRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG~----tK-~dDi~~~~R~r~ 302 (400)
+.|-.+.+......+-.+|+..=+-+|+|.||..++++ |.+.. .++-|+|-...-. .| .--++.+-|++.
T Consensus 61 ~~~~~~~~~~~~~~~~~~V~~~GtFD~~H~GHl~iL~r----Ak~lf-~gD~LIVgV~~D~~v~~~Kg~pi~s~eER~e~ 135 (236)
T 3hl4_A 61 RVTMEEACRGTPCERPVRVYADGIFDLFHSGHARALMQ----AKNLF-PNTYLIVGVCSDELTHNFKGFTVMNENERYDA 135 (236)
T ss_dssp CCCHHHHHHCCCTTSCEEEEEEECCTTCCHHHHHHHHH----HHTSS-SSEEEEEEECCHHHHHHHTCCCSSCHHHHHHH
T ss_pred hccHHHHhcCCCCCCCeEEEEeccCCCCCHHHHHHHHH----HHHhc-CCCeEEEEEcccHHHhhcCCCCCCCHHHHHHH
Confidence 45666665544333334466666999999999999874 44541 1133444221111 23 336899999998
Q ss_pred HHHHHHcCCCCCCcEEEEeCCCCCCCCChhHHHHHHHHHHhcCCcEEEecCCC
Q 015787 303 HEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDP 355 (400)
Q Consensus 303 ye~ll~~~y~p~~~~~l~~lp~~mryAGPREallHAiiRkNyGcThfIVGRDH 355 (400)
.+++ . +. +.+++. -|+. ... =.-+.+||+.++.|-|.
T Consensus 136 v~~~-k--~V--D~Vvv~-~p~~-----l~~-----d~i~~~~~d~Vv~GDd~ 172 (236)
T 3hl4_A 136 VQHC-R--YV--DEVVRN-APWT-----LTP-----EFLAEHRIDFVAHDDIP 172 (236)
T ss_dssp HHTB-T--TC--SEEESS-CCSS-----CCH-----HHHHHTTCCEEEEESSC
T ss_pred HHHh-C--CC--CeEEEC-CcCc-----CcH-----HHHHHcCCCEEEECCcc
Confidence 8763 2 33 334331 1221 111 12247899988888663
No 50
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=38.53 E-value=29 Score=33.34 Aligned_cols=36 Identities=25% Similarity=0.401 Sum_probs=25.3
Q ss_pred cCCHHHHHHHHHhcCCCceEEee-eCCCCchhHHHHHHHHH
Q 015787 228 RLSPAQLRDEFSKRNADAVFAFQ-LRNPVHNGHALLMTDTR 267 (400)
Q Consensus 228 r~tP~e~R~~f~~~gw~~VvAfQ-tRNPlHRaHe~l~r~~~ 267 (400)
..+..|+|+..++.| ++|. |=.-+|+||..|++.|+
T Consensus 4 ~~~~~~l~~~~~~~g----i~~VpTmG~lH~GH~~Li~~A~ 40 (276)
T 1v8f_A 4 VSTVAELRAALPREG----VGFVPTMGYLHRGHLALVERAR 40 (276)
T ss_dssp ECSHHHHHHHCCSSC----EEEEEECSSCCHHHHHHHHHHH
T ss_pred EecHHHHHHHHhhcC----ceEEEeCCCccHHHHHHHHHHH
Confidence 347889988774444 5554 54449999999998543
No 51
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=37.50 E-value=34 Score=33.18 Aligned_cols=63 Identities=11% Similarity=0.212 Sum_probs=38.6
Q ss_pred cCCHHHHHHHHHh-cCCCceEEee-eCCCCchhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCCCCCCC
Q 015787 228 RLSPAQLRDEFSK-RNADAVFAFQ-LRNPVHNGHALLMTDTRRRLLEMGYQNPILLLHPLGGYTKADDVP 295 (400)
Q Consensus 228 r~tP~e~R~~f~~-~gw~~VvAfQ-tRNPlHRaHe~l~r~~~~~ale~~~~~~~Lll~PlvG~tK~dDi~ 295 (400)
-.|++|+|+..+. +.-.+-+||. |=.-+|.||..|++.| .+.....-.+|+||+ ---..+|+.
T Consensus 7 ~~ti~elr~~~~~~~~~g~~Ig~VPTMGaLH~GHlsLv~~A----r~~d~VVVSIFVNP~-QF~~~EDl~ 71 (285)
T 3mxt_A 7 ITSVKEAKQIVKDWKSHQLSIGYVPTMGFLHDGHLSLVKHA----KTQDKVIVSIFVNPM-QFGPNEDFS 71 (285)
T ss_dssp ECCHHHHHHHHHHHHHTTCCEEEEEECSSCCHHHHHHHHHH----TTSSEEEEEECCCGG-GCCTTSCTT
T ss_pred EcCHHHHHHHHHHHHHcCCeEEEEcCCCcccHHHHHHHHHH----HhCCEEEEEeccCcc-ccCCchhhh
Confidence 3589999988753 1123457887 8899999999999854 231000114566665 223445553
No 52
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=32.77 E-value=82 Score=26.43 Aligned_cols=57 Identities=21% Similarity=0.150 Sum_probs=38.2
Q ss_pred ceeEEEecCHHHHHhcCCC-----------CeEEEEcCCCcEEEEEEeCccccC-CHHHHHHHhhCCCC
Q 015787 134 SVPIVLAIDDEQKRRIGES-----------TRVALVDSDDNVVAILNDIEIYKH-PKEERIARTWGTTA 190 (400)
Q Consensus 134 piPI~L~v~~e~a~~l~~G-----------~~vaL~d~eG~~vAiL~V~eif~~-dk~~ea~~vfGT~d 190 (400)
++|+..+.+.+.++.+..- -...|+|++|++++.....+.... +-++..+.+..|.-
T Consensus 100 ~~~~l~D~~~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l~~~~~ 168 (175)
T 1xvq_A 100 NVMPASAFRDSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTELVPEIAQEPNYEAALAALGATSG 168 (175)
T ss_dssp CEEEEECTTSSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEEEECSBTTCCCCHHHHHHHHHHTC-
T ss_pred CceEeeCCHHHHHHHhCCcccccccCCcccceEEEECCCCeEEEEEECCCcCCCCCHHHHHHHHHhhcC
Confidence 3488888776666665432 258889999999999875555543 55666666665544
No 53
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=27.22 E-value=1.1e+02 Score=24.12 Aligned_cols=62 Identities=13% Similarity=0.123 Sum_probs=33.2
Q ss_pred ceeEEEecCHHHHHhcC--CCCeEEEEcCCCcEEEEEEeCcccc-CCHHHHHHHhhCCCCCCChh
Q 015787 134 SVPIVLAIDDEQKRRIG--ESTRVALVDSDDNVVAILNDIEIYK-HPKEERIARTWGTTAPGLPY 195 (400)
Q Consensus 134 piPI~L~v~~e~a~~l~--~G~~vaL~d~eG~~vAiL~V~eif~-~dk~~ea~~vfGT~d~~HPg 195 (400)
++|+..+.+.+.++.+. .--.+.|+|++|+++....-..-+. ..-++..++.-+..+..||+
T Consensus 86 ~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~~~~~~~~ 150 (152)
T 3gl3_A 86 EFTVAFDPKGQTPRLYGVKGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGGNEGHHHH 150 (152)
T ss_dssp CSEEEECTTCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC--------
T ss_pred CCceeECCcchhHHHcCCCCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHccccccccc
Confidence 34888888777766554 3346788999999998776332221 12333455555555555554
No 54
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=24.27 E-value=1.5e+02 Score=25.19 Aligned_cols=38 Identities=13% Similarity=0.101 Sum_probs=28.5
Q ss_pred ceeEEEecCHHHHHhcCC-----C---CeEEEEcCCCcEEEEEEeC
Q 015787 134 SVPIVLAIDDEQKRRIGE-----S---TRVALVDSDDNVVAILNDI 171 (400)
Q Consensus 134 piPI~L~v~~e~a~~l~~-----G---~~vaL~d~eG~~vAiL~V~ 171 (400)
++|++.|.+.+.++.+.. | -...|+|++|++++...-.
T Consensus 92 ~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~i~~~~~~~ 137 (186)
T 1n8j_A 92 KYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTA 137 (186)
T ss_dssp CSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEEC
T ss_pred ceeEEECCchHHHHHhCCccCCCCceeeEEEEECCCCeEEEEEecC
Confidence 558888887777776654 2 4677899999999987644
No 55
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=22.83 E-value=43 Score=26.52 Aligned_cols=23 Identities=4% Similarity=0.237 Sum_probs=16.9
Q ss_pred CCeEEEEcCCCcEEEEEEeCccc
Q 015787 152 STRVALVDSDDNVVAILNDIEIY 174 (400)
Q Consensus 152 G~~vaL~d~eG~~vAiL~V~eif 174 (400)
-..+..+|.+|+++|+++..++.
T Consensus 99 ~~~~pVvd~~g~~~Giit~~Dil 121 (129)
T 3jtf_A 99 NHLAIVIDEHGGISGLVTMEDVL 121 (129)
T ss_dssp CCEEEEECC-CCEEEEEEHHHHH
T ss_pred CeEEEEEeCCCCEEEEEEHHHHH
Confidence 34555677679999999988865
No 56
>2ki8_A Tungsten formylmethanofuran dehydrogenase, subunit D (FWDD-2); beta-barrel, structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus}
Probab=22.14 E-value=1.1e+02 Score=26.08 Aligned_cols=31 Identities=23% Similarity=0.279 Sum_probs=24.5
Q ss_pred EecCHHHHH--hcCCCCeEEEEcCCCcEEEEEE
Q 015787 139 LAIDDEQKR--RIGESTRVALVDSDDNVVAILN 169 (400)
Q Consensus 139 L~v~~e~a~--~l~~G~~vaL~d~eG~~vAiL~ 169 (400)
+.++.++|+ +|+.||.|.+....|.+.+...
T Consensus 55 v~inp~dA~~lGI~dGd~V~V~s~~G~v~~~a~ 87 (146)
T 2ki8_A 55 AEINEEDWNALGLQEGDRVKVKTEFGEVVVFAK 87 (146)
T ss_dssp EEECHHHHHHHTCCTTCEEEEECSSCEEEEEEE
T ss_pred EEECHHHHHHcCCCCCCEEEEEeCCcEEEEEEe
Confidence 457777766 5689999999998898776666
No 57
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=21.53 E-value=75 Score=25.75 Aligned_cols=30 Identities=17% Similarity=0.295 Sum_probs=23.2
Q ss_pred HHhcCCCCeEEEEcCCCcEEEEEEeCcccc
Q 015787 146 KRRIGESTRVALVDSDDNVVAILNDIEIYK 175 (400)
Q Consensus 146 a~~l~~G~~vaL~d~eG~~vAiL~V~eif~ 175 (400)
++.+.....+.++|.+|+++|+++..++.+
T Consensus 109 ~~~~~~~~~lpVvd~~g~~~Giit~~dil~ 138 (156)
T 3ctu_A 109 LHKLVDESFLPVVDAEGIFQGIITRKSILK 138 (156)
T ss_dssp HHHTTTSSEEEEECTTSBEEEEEETTHHHH
T ss_pred HHHHHHcCeEEEEcCCCeEEEEEEHHHHHH
Confidence 344554457888887899999999998874
No 58
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=20.91 E-value=1.7e+02 Score=24.10 Aligned_cols=41 Identities=12% Similarity=0.089 Sum_probs=27.4
Q ss_pred ceeEEEecCHHHHHhcCC--------CC-----eEEEEcCCCcEEEEEEeCccc
Q 015787 134 SVPIVLAIDDEQKRRIGE--------ST-----RVALVDSDDNVVAILNDIEIY 174 (400)
Q Consensus 134 piPI~L~v~~e~a~~l~~--------G~-----~vaL~d~eG~~vAiL~V~eif 174 (400)
++|+..|.+.+.++.... |. ..-|+|++|+++.+-...+..
T Consensus 88 ~~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~ 141 (157)
T 4g2e_A 88 NFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPT 141 (157)
T ss_dssp CSEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEESSTT
T ss_pred cEEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEECCCCC
Confidence 448888888887776532 11 245789999988766555443
No 59
>4gqo_A LMO0859 protein; virulence, pathogenesis, vaccine candidate, center for struc genomics of infectious diseases, csgid, niaid; HET: MSE PGE; 2.10A {Listeria monocytogenes}
Probab=20.59 E-value=1.3e+02 Score=28.46 Aligned_cols=67 Identities=13% Similarity=0.212 Sum_probs=45.2
Q ss_pred HhccCCeEee--ChhhHHHHHHHhcCCcCCCCCCCChhhh------hcccccCCeecCCCCeeecceeEEEec-----CH
Q 015787 77 EAATLPRIRL--TKIDLQWVHVLSEGWASPLSGFMRESEF------LQTLHFNSLRLDDGSVVNMSVPIVLAI-----DD 143 (400)
Q Consensus 77 ea~~lp~i~l--~~~~l~dLelL~~G~fSPL~GFM~e~dy------~sVl~~~~mrL~dG~~~pwpiPI~L~v-----~~ 143 (400)
.+.+.|.|.. +...+. ++...|++.||+.++...+. ..++ +.....||..+ .||+...+ ++
T Consensus 82 asg~~PDv~~~~~~~~~~--~~~~~g~l~~L~~~~~~~~~~~~~~~~~~~--~~~~~~dGk~y--~~P~~~~~~~l~Ynk 155 (433)
T 4gqo_A 82 ASKTAPTMSENINRSFAA--QLADSKAIVPLNDVKGLDDVVKERNMSETM--DSWKFSDGNQY--VLPVYSNPILFAWRL 155 (433)
T ss_dssp HHTCCCSEEEEECHHHHH--HHHHTTSBCCGGGSTTHHHHHHHTTCHHHH--HHTCCTTSCCC--CEEEEEEECEEEECH
T ss_pred HCCCCCeEEEEcCHHHHH--HHHHCCCEEEChhhhcccchhhhhhhHHHH--HHhcccCCEEE--EEeccCceEEEEEeh
Confidence 4678998753 443333 46789999999999875543 3444 45566799985 77876543 77
Q ss_pred HHHHhc
Q 015787 144 EQKRRI 149 (400)
Q Consensus 144 e~a~~l 149 (400)
+..+.+
T Consensus 156 dlf~~a 161 (433)
T 4gqo_A 156 DTLKEL 161 (433)
T ss_dssp HHHHHT
T ss_pred hhHHHc
Confidence 766654
Done!