Query 015796
Match_columns 400
No_of_seqs 159 out of 1413
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 18:49:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015796.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015796hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vr4_D V-type sodium ATPase su 100.0 2E-108 8E-113 839.2 35.5 377 12-400 3-379 (465)
2 3gqb_B V-type ATP synthase bet 100.0 9E-108 3E-112 834.8 36.1 378 17-400 4-382 (464)
3 2c61_A A-type ATP synthase non 100.0 4E-107 1E-111 834.5 33.6 372 16-400 9-380 (469)
4 3oaa_A ATP synthase subunit al 100.0 2E-103 7E-108 808.0 34.7 356 17-400 24-393 (513)
5 2qe7_A ATP synthase subunit al 100.0 1E-101 5E-106 796.5 37.8 355 18-400 25-382 (502)
6 2r9v_A ATP synthase subunit al 100.0 8E-102 3E-106 798.5 34.5 356 18-400 37-395 (515)
7 2ck3_A ATP synthase subunit al 100.0 6E-101 2E-105 792.9 34.8 363 18-400 25-390 (510)
8 1fx0_A ATP synthase alpha chai 100.0 2E-101 7E-106 796.0 25.5 355 18-400 26-383 (507)
9 1fx0_B ATP synthase beta chain 100.0 1.3E-99 5E-104 781.0 31.5 358 21-400 20-391 (498)
10 2ck3_D ATP synthase subunit be 100.0 2.4E-98 8E-103 769.1 36.2 358 20-400 13-378 (482)
11 3vr4_A V-type sodium ATPase ca 100.0 5.4E-98 2E-102 776.2 25.3 356 21-400 10-467 (600)
12 3gqb_A V-type ATP synthase alp 100.0 5.5E-98 2E-102 773.4 24.2 356 21-400 3-454 (578)
13 3mfy_A V-type ATP synthase alp 100.0 9.4E-99 3E-103 779.3 9.0 357 20-400 3-462 (588)
14 1sky_E F1-ATPase, F1-ATP synth 100.0 1.4E-92 4.7E-97 727.9 34.3 359 20-400 2-370 (473)
15 3l0o_A Transcription terminati 100.0 2.2E-73 7.6E-78 569.5 14.9 289 77-400 96-387 (427)
16 3ice_A Transcription terminati 100.0 1.6E-69 5.4E-74 542.6 14.5 241 131-400 141-386 (422)
17 2dpy_A FLII, flagellum-specifi 100.0 3.9E-64 1.3E-68 516.3 31.7 360 15-400 4-373 (438)
18 2obl_A ESCN; ATPase, hydrolase 100.0 9.9E-59 3.4E-63 463.2 21.2 282 92-400 2-284 (347)
19 4a74_A DNA repair and recombin 97.4 0.00055 1.9E-08 61.8 9.3 42 142-183 5-48 (231)
20 2cvh_A DNA repair and recombin 97.2 0.00082 2.8E-08 60.3 7.6 39 144-182 2-42 (220)
21 1n0w_A DNA repair protein RAD5 97.1 0.0014 4.6E-08 59.7 8.5 43 142-184 4-48 (243)
22 3io5_A Recombination and repai 97.1 0.00082 2.8E-08 66.0 7.3 111 142-282 5-124 (333)
23 3hr8_A Protein RECA; alpha and 97.0 0.00071 2.4E-08 67.2 5.9 44 141-184 39-85 (356)
24 2zr9_A Protein RECA, recombina 97.0 0.001 3.5E-08 65.7 6.7 110 141-282 39-152 (349)
25 2ehv_A Hypothetical protein PH 96.8 0.00097 3.3E-08 60.9 4.8 41 142-182 10-52 (251)
26 2w0m_A SSO2452; RECA, SSPF, un 96.8 0.001 3.5E-08 59.8 4.5 43 142-184 3-47 (235)
27 2z43_A DNA repair and recombin 96.7 0.0065 2.2E-07 58.9 10.4 44 141-184 86-131 (324)
28 1v5w_A DMC1, meiotic recombina 96.7 0.0075 2.5E-07 59.1 10.4 44 141-184 101-146 (343)
29 1u94_A RECA protein, recombina 96.6 0.0021 7.2E-08 63.7 6.1 44 141-184 41-87 (356)
30 1xp8_A RECA protein, recombina 96.6 0.0023 7.7E-08 63.7 6.4 110 141-282 52-165 (366)
31 2i1q_A DNA repair and recombin 96.6 0.0062 2.1E-07 58.7 9.0 44 141-184 77-122 (322)
32 1pzn_A RAD51, DNA repair and r 96.5 0.0049 1.7E-07 60.7 7.6 44 141-184 110-155 (349)
33 3lda_A DNA repair protein RAD5 96.3 0.013 4.3E-07 59.0 9.2 44 141-184 157-202 (400)
34 2zts_A Putative uncharacterize 96.2 0.003 1E-07 57.5 3.9 42 143-184 11-54 (251)
35 3bh0_A DNAB-like replicative h 96.1 0.015 5.2E-07 56.1 8.7 45 141-185 48-93 (315)
36 2dr3_A UPF0273 protein PH0284; 96.1 0.0039 1.3E-07 56.7 4.1 43 142-184 3-47 (247)
37 3cmw_A Protein RECA, recombina 95.8 0.0088 3E-07 70.0 6.1 115 139-284 10-127 (1706)
38 1tf7_A KAIC; homohexamer, hexa 95.7 0.045 1.5E-06 56.6 10.7 43 142-184 261-305 (525)
39 2v1u_A Cell division control p 95.6 0.034 1.2E-06 53.6 8.8 101 158-284 42-145 (387)
40 1nlf_A Regulatory protein REPA 95.5 0.0071 2.4E-07 57.0 3.6 46 138-183 7-53 (279)
41 1w5s_A Origin recognition comp 95.3 0.034 1.2E-06 54.4 7.8 98 159-282 49-151 (412)
42 1cr0_A DNA primase/helicase; R 95.3 0.0057 1.9E-07 58.0 2.0 43 142-184 15-59 (296)
43 1zp6_A Hypothetical protein AT 95.2 0.0097 3.3E-07 52.1 2.9 30 154-183 3-32 (191)
44 3cmu_A Protein RECA, recombina 95.1 0.019 6.3E-07 68.2 5.9 112 138-282 1402-1518(2050)
45 2qby_A CDC6 homolog 1, cell di 95.1 0.065 2.2E-06 51.5 8.9 99 158-282 43-141 (386)
46 2r6a_A DNAB helicase, replicat 95.1 0.058 2E-06 54.6 8.9 44 142-185 184-228 (454)
47 1z6g_A Guanylate kinase; struc 95.1 0.011 3.7E-07 54.0 3.0 29 155-183 18-46 (218)
48 1fnn_A CDC6P, cell division co 95.0 0.12 4.2E-06 49.8 10.6 89 162-281 46-137 (389)
49 1znw_A Guanylate kinase, GMP k 95.0 0.013 4.4E-07 52.7 3.3 29 156-184 16-44 (207)
50 3tif_A Uncharacterized ABC tra 95.0 0.015 5E-07 54.0 3.6 34 149-182 19-53 (235)
51 3tr0_A Guanylate kinase, GMP k 94.9 0.014 4.8E-07 51.6 3.3 27 157-183 4-30 (205)
52 3cmu_A Protein RECA, recombina 94.9 0.022 7.4E-07 67.7 5.7 117 137-284 8-127 (2050)
53 2pcj_A ABC transporter, lipopr 94.8 0.015 5.3E-07 53.4 3.5 34 149-182 18-52 (224)
54 2cbz_A Multidrug resistance-as 94.8 0.017 5.9E-07 53.6 3.6 32 152-183 23-54 (237)
55 2ff7_A Alpha-hemolysin translo 94.7 0.018 6.2E-07 53.8 3.6 33 150-182 24-57 (247)
56 2q6t_A DNAB replication FORK h 94.7 0.08 2.7E-06 53.5 8.6 44 142-185 181-225 (444)
57 2d2e_A SUFC protein; ABC-ATPas 94.6 0.023 7.8E-07 53.1 4.1 34 149-182 17-51 (250)
58 2zu0_C Probable ATP-dependent 94.6 0.023 7.8E-07 53.8 4.1 35 148-182 33-68 (267)
59 1b0u_A Histidine permease; ABC 94.6 0.019 6.6E-07 54.1 3.6 34 149-182 20-54 (262)
60 4g1u_C Hemin import ATP-bindin 94.6 0.019 6.6E-07 54.3 3.5 35 148-182 24-59 (266)
61 3fvq_A Fe(3+) IONS import ATP- 94.6 0.022 7.4E-07 56.5 4.0 36 147-182 16-52 (359)
62 1htw_A HI0065; nucleotide-bind 94.6 0.018 6E-07 50.3 2.9 30 155-184 28-57 (158)
63 3gfo_A Cobalt import ATP-bindi 94.5 0.02 6.9E-07 54.5 3.6 34 149-182 22-56 (275)
64 2olj_A Amino acid ABC transpor 94.5 0.021 7.1E-07 54.0 3.6 34 149-182 38-72 (263)
65 2pze_A Cystic fibrosis transme 94.5 0.021 7.3E-07 52.6 3.6 31 152-182 26-56 (229)
66 1vpl_A ABC transporter, ATP-bi 94.5 0.021 7.3E-07 53.7 3.6 34 149-182 29-63 (256)
67 1sgw_A Putative ABC transporte 94.5 0.02 6.8E-07 52.5 3.3 34 149-182 23-57 (214)
68 1ji0_A ABC transporter; ATP bi 94.5 0.022 7.5E-07 52.9 3.6 33 150-182 21-54 (240)
69 2ihy_A ABC transporter, ATP-bi 94.5 0.021 7.3E-07 54.4 3.6 34 149-182 35-69 (279)
70 1g6h_A High-affinity branched- 94.4 0.02 6.9E-07 53.7 3.2 34 149-182 21-55 (257)
71 1mv5_A LMRA, multidrug resista 94.4 0.022 7.5E-07 53.0 3.5 31 152-182 20-50 (243)
72 2ixe_A Antigen peptide transpo 94.4 0.023 7.8E-07 53.9 3.6 31 152-182 37-67 (271)
73 4a1f_A DNAB helicase, replicat 94.4 0.12 4.2E-06 50.7 8.9 44 142-185 27-71 (338)
74 3cmw_A Protein RECA, recombina 94.4 0.033 1.1E-06 65.3 5.5 45 141-185 361-408 (1706)
75 2qi9_C Vitamin B12 import ATP- 94.4 0.024 8.1E-07 53.2 3.6 31 152-182 18-48 (249)
76 2ghi_A Transport protein; mult 94.4 0.024 8.2E-07 53.4 3.6 31 152-182 38-68 (260)
77 4eun_A Thermoresistant glucoki 94.4 0.023 8E-07 50.6 3.4 40 146-185 15-54 (200)
78 3rlf_A Maltose/maltodextrin im 94.4 0.027 9.2E-07 56.3 4.1 36 147-182 15-51 (381)
79 1z47_A CYSA, putative ABC-tran 94.4 0.027 9.3E-07 55.7 4.1 33 150-182 30-63 (355)
80 3c8u_A Fructokinase; YP_612366 94.4 0.023 7.7E-07 51.1 3.3 28 157-184 19-46 (208)
81 2yyz_A Sugar ABC transporter, 94.3 0.028 9.7E-07 55.7 4.1 34 149-182 17-51 (359)
82 2yz2_A Putative ABC transporte 94.3 0.025 8.7E-07 53.3 3.6 33 150-182 22-55 (266)
83 1v43_A Sugar-binding transport 94.3 0.029 9.8E-07 55.9 4.1 34 149-182 25-59 (372)
84 2nq2_C Hypothetical ABC transp 94.3 0.025 8.6E-07 53.1 3.5 33 150-182 20-53 (253)
85 3ec2_A DNA replication protein 94.3 0.025 8.6E-07 49.2 3.3 29 156-184 34-62 (180)
86 2it1_A 362AA long hypothetical 94.3 0.029 1E-06 55.6 4.1 34 149-182 17-51 (362)
87 1g29_1 MALK, maltose transport 94.2 0.03 1E-06 55.7 4.1 34 149-182 17-51 (372)
88 4gp7_A Metallophosphoesterase; 94.2 0.028 9.5E-07 49.0 3.4 26 154-179 3-28 (171)
89 2vhj_A Ntpase P4, P4; non- hyd 94.1 0.044 1.5E-06 53.7 4.9 44 140-183 102-146 (331)
90 2jeo_A Uridine-cytidine kinase 94.0 0.027 9.4E-07 51.9 3.2 33 153-185 18-50 (245)
91 3lnc_A Guanylate kinase, GMP k 94.0 0.023 7.9E-07 51.7 2.7 29 155-183 22-51 (231)
92 1q57_A DNA primase/helicase; d 94.0 0.098 3.3E-06 53.6 7.7 44 142-185 222-267 (503)
93 3gd7_A Fusion complex of cysti 94.0 0.034 1.2E-06 55.7 4.0 35 148-182 34-69 (390)
94 2j41_A Guanylate kinase; GMP, 94.0 0.031 1E-06 49.4 3.3 29 156-184 2-30 (207)
95 1tf7_A KAIC; homohexamer, hexa 94.0 0.019 6.3E-07 59.5 2.1 39 142-180 19-59 (525)
96 1lvg_A Guanylate kinase, GMP k 94.0 0.027 9.3E-07 50.4 2.9 25 159-183 3-27 (198)
97 2v9p_A Replication protein E1; 93.9 0.019 6.5E-07 55.7 2.0 32 152-183 118-149 (305)
98 1kgd_A CASK, peripheral plasma 93.9 0.033 1.1E-06 48.8 3.4 25 159-183 4-28 (180)
99 3bos_A Putative DNA replicatio 93.9 0.04 1.4E-06 49.3 4.0 28 158-185 50-77 (242)
100 3d31_A Sulfate/molybdate ABC t 93.9 0.025 8.6E-07 55.8 2.9 31 152-182 18-48 (348)
101 3tui_C Methionine import ATP-b 93.8 0.041 1.4E-06 54.7 4.1 35 148-182 41-76 (366)
102 2bbs_A Cystic fibrosis transme 93.7 0.036 1.2E-06 53.2 3.5 32 152-183 56-87 (290)
103 3asz_A Uridine kinase; cytidin 93.6 0.035 1.2E-06 49.4 3.1 27 157-183 3-29 (211)
104 3vaa_A Shikimate kinase, SK; s 93.6 0.04 1.4E-06 49.0 3.4 31 155-185 20-50 (199)
105 2pjz_A Hypothetical protein ST 93.6 0.042 1.4E-06 52.0 3.5 29 153-182 24-52 (263)
106 1oxx_K GLCV, glucose, ABC tran 93.5 0.026 8.9E-07 55.7 2.2 33 150-182 20-53 (353)
107 3nh6_A ATP-binding cassette SU 93.5 0.026 8.9E-07 54.7 2.0 36 148-183 67-103 (306)
108 2i3b_A HCR-ntpase, human cance 93.4 0.04 1.4E-06 49.4 3.0 25 160-184 1-25 (189)
109 3b85_A Phosphate starvation-in 93.3 0.04 1.4E-06 50.2 2.8 27 157-183 19-45 (208)
110 2a5y_B CED-4; apoptosis; HET: 93.1 0.18 6.3E-06 52.1 7.9 22 161-182 153-174 (549)
111 2onk_A Molybdate/tungstate ABC 92.7 0.077 2.6E-06 49.3 4.0 30 152-182 17-46 (240)
112 1y63_A LMAJ004144AAA protein; 92.7 0.072 2.5E-06 46.7 3.5 28 156-183 6-33 (184)
113 3te6_A Regulatory protein SIR3 92.6 0.39 1.3E-05 46.7 8.9 97 158-282 43-145 (318)
114 1ye8_A Protein THEP1, hypothet 92.5 0.069 2.3E-06 47.2 3.2 24 161-184 1-24 (178)
115 1kag_A SKI, shikimate kinase I 92.5 0.068 2.3E-06 45.8 3.1 26 159-184 3-28 (173)
116 2qt1_A Nicotinamide riboside k 92.5 0.056 1.9E-06 48.1 2.6 29 155-183 16-44 (207)
117 1knq_A Gluconate kinase; ALFA/ 92.5 0.075 2.6E-06 45.8 3.3 28 158-185 6-33 (175)
118 3ney_A 55 kDa erythrocyte memb 92.4 0.077 2.6E-06 48.1 3.5 29 155-183 14-42 (197)
119 3a00_A Guanylate kinase, GMP k 92.4 0.067 2.3E-06 47.0 3.0 25 160-184 1-25 (186)
120 1s96_A Guanylate kinase, GMP k 92.4 0.07 2.4E-06 48.9 3.3 27 157-183 13-39 (219)
121 3sr0_A Adenylate kinase; phosp 92.4 1.1 3.8E-05 40.4 11.2 22 162-183 2-23 (206)
122 2kjq_A DNAA-related protein; s 92.3 0.079 2.7E-06 45.4 3.3 26 159-184 35-60 (149)
123 3aez_A Pantothenate kinase; tr 92.1 0.075 2.6E-06 51.4 3.1 28 156-183 86-113 (312)
124 1l8q_A Chromosomal replication 91.9 0.13 4.4E-06 49.1 4.5 26 159-184 36-61 (324)
125 3uie_A Adenylyl-sulfate kinase 91.9 0.094 3.2E-06 46.6 3.3 27 158-184 23-49 (200)
126 1pui_A ENGB, probable GTP-bind 91.8 0.045 1.6E-06 48.2 1.1 32 149-181 16-47 (210)
127 3pvs_A Replication-associated 91.8 0.54 1.8E-05 47.6 9.2 25 161-185 51-75 (447)
128 2eyu_A Twitching motility prot 91.7 0.1 3.4E-06 49.1 3.4 27 157-183 22-48 (261)
129 1cke_A CK, MSSA, protein (cyti 91.7 0.11 3.6E-06 46.7 3.4 25 160-184 5-29 (227)
130 3tau_A Guanylate kinase, GMP k 91.7 0.1 3.4E-06 46.9 3.3 27 158-184 6-32 (208)
131 1yqt_A RNAse L inhibitor; ATP- 91.6 0.1 3.5E-06 54.3 3.7 33 150-182 37-69 (538)
132 2bdt_A BH3686; alpha-beta prot 91.5 0.09 3.1E-06 45.9 2.7 24 160-183 2-25 (189)
133 1lw7_A Transcriptional regulat 91.5 0.069 2.4E-06 52.4 2.1 30 155-184 163-194 (365)
134 1t9h_A YLOQ, probable GTPase E 91.4 0.03 1E-06 54.4 -0.6 31 151-181 164-194 (307)
135 1sq5_A Pantothenate kinase; P- 91.4 0.099 3.4E-06 50.1 3.1 28 156-183 76-103 (308)
136 2bbw_A Adenylate kinase 4, AK4 91.4 0.11 3.9E-06 47.5 3.4 27 159-185 26-52 (246)
137 2x8a_A Nuclear valosin-contain 91.3 0.096 3.3E-06 49.4 2.9 28 156-185 42-69 (274)
138 2yv5_A YJEQ protein; hydrolase 91.3 0.056 1.9E-06 51.9 1.3 32 150-181 155-186 (302)
139 3j16_B RLI1P; ribosome recycli 91.3 0.11 3.9E-06 54.8 3.7 33 150-182 93-125 (608)
140 2qor_A Guanylate kinase; phosp 91.3 0.11 3.9E-06 46.1 3.2 28 157-184 9-36 (204)
141 3cm0_A Adenylate kinase; ATP-b 91.2 0.11 3.7E-06 45.1 2.9 26 159-184 3-28 (186)
142 1zu4_A FTSY; GTPase, signal re 91.2 1.4 4.8E-05 42.5 11.1 30 155-184 100-129 (320)
143 3b9q_A Chloroplast SRP recepto 91.2 0.11 3.8E-06 49.9 3.3 30 155-184 95-124 (302)
144 2npi_A Protein CLP1; CLP1-PCF1 91.2 0.083 2.8E-06 54.0 2.4 31 153-183 131-161 (460)
145 1ixz_A ATP-dependent metallopr 91.1 0.11 3.6E-06 47.8 2.9 27 156-184 47-73 (254)
146 3bgw_A DNAB-like replicative h 91.0 0.071 2.4E-06 54.2 1.7 45 141-185 177-222 (444)
147 2qby_B CDC6 homolog 3, cell di 91.0 0.49 1.7E-05 45.6 7.7 26 159-184 44-69 (384)
148 4e22_A Cytidylate kinase; P-lo 90.9 0.13 4.6E-06 47.6 3.4 26 158-183 25-50 (252)
149 2qm8_A GTPase/ATPase; G protei 90.6 0.099 3.4E-06 51.0 2.3 31 153-183 48-78 (337)
150 3b5x_A Lipid A export ATP-bind 90.6 0.13 4.5E-06 53.7 3.4 32 152-183 361-392 (582)
151 3b60_A Lipid A export ATP-bind 90.6 0.12 4.3E-06 53.9 3.2 32 152-183 361-392 (582)
152 2yl4_A ATP-binding cassette SU 90.5 0.13 4.3E-06 54.1 3.2 34 150-183 359-393 (595)
153 1c9k_A COBU, adenosylcobinamid 90.5 0.046 1.6E-06 49.0 -0.2 42 163-224 2-45 (180)
154 1rj9_A FTSY, signal recognitio 90.5 0.15 5.3E-06 49.0 3.5 27 158-184 100-126 (304)
155 1yqt_A RNAse L inhibitor; ATP- 90.5 0.15 5E-06 53.1 3.6 28 156-183 308-335 (538)
156 1z6t_A APAF-1, apoptotic prote 90.5 0.31 1.1E-05 50.3 6.0 25 159-183 146-170 (591)
157 1rz3_A Hypothetical protein rb 90.4 0.15 5.1E-06 45.4 3.1 28 156-183 18-45 (201)
158 2wwf_A Thymidilate kinase, put 90.2 0.18 6.2E-06 44.5 3.5 29 157-185 7-35 (212)
159 3bs4_A Uncharacterized protein 90.1 0.67 2.3E-05 43.7 7.5 60 144-219 3-64 (260)
160 1kht_A Adenylate kinase; phosp 90.0 0.18 6.3E-06 43.5 3.3 26 159-184 2-27 (192)
161 2gj8_A MNME, tRNA modification 90.0 0.16 5.3E-06 43.7 2.8 25 159-183 3-27 (172)
162 2yhs_A FTSY, cell division pro 90.0 0.16 5.4E-06 52.5 3.3 30 155-184 288-317 (503)
163 1d2n_A N-ethylmaleimide-sensit 90.0 0.29 9.8E-06 45.4 4.8 26 160-185 64-89 (272)
164 3bk7_A ABC transporter ATP-bin 90.0 0.15 5.1E-06 53.9 3.2 33 150-182 107-139 (607)
165 2iw3_A Elongation factor 3A; a 89.9 0.2 6.7E-06 55.9 4.1 34 149-182 449-483 (986)
166 1iy2_A ATP-dependent metallopr 89.9 0.16 5.3E-06 47.5 2.9 27 156-184 71-97 (278)
167 2pez_A Bifunctional 3'-phospho 89.9 0.19 6.5E-06 43.5 3.3 25 159-183 4-28 (179)
168 3qf4_B Uncharacterized ABC tra 89.8 0.14 5E-06 53.7 2.9 32 152-183 373-404 (598)
169 1u0l_A Probable GTPase ENGC; p 89.8 0.083 2.9E-06 50.5 1.0 33 150-182 159-191 (301)
170 2og2_A Putative signal recogni 89.7 0.18 6E-06 49.9 3.3 30 155-184 152-181 (359)
171 3ozx_A RNAse L inhibitor; ATP 89.7 0.16 5.4E-06 52.9 3.1 28 155-182 289-316 (538)
172 3h4m_A Proteasome-activating n 89.7 1.3 4.5E-05 40.8 9.2 27 159-185 50-76 (285)
173 3bk7_A ABC transporter ATP-bin 89.6 0.19 6.5E-06 53.1 3.6 27 156-182 378-404 (607)
174 2qp9_X Vacuolar protein sortin 89.4 1.4 4.7E-05 42.9 9.4 25 161-185 85-109 (355)
175 4a82_A Cystic fibrosis transme 89.3 0.12 4.1E-06 54.1 1.7 31 152-182 359-389 (578)
176 3kb2_A SPBC2 prophage-derived 89.2 0.22 7.5E-06 42.2 3.1 24 162-185 3-26 (173)
177 1jbk_A CLPB protein; beta barr 89.2 0.25 8.5E-06 41.9 3.4 27 158-184 41-67 (195)
178 3eie_A Vacuolar protein sortin 89.1 0.88 3E-05 43.4 7.7 25 161-185 52-76 (322)
179 3iij_A Coilin-interacting nucl 89.0 0.23 7.8E-06 42.9 3.2 28 158-185 9-36 (180)
180 2rcn_A Probable GTPase ENGC; Y 89.0 0.11 3.7E-06 51.5 1.1 32 151-182 206-237 (358)
181 2if2_A Dephospho-COA kinase; a 88.8 0.22 7.4E-06 43.9 2.9 21 162-182 3-23 (204)
182 3sfz_A APAF-1, apoptotic pepti 88.8 0.33 1.1E-05 54.0 5.0 22 162-183 149-170 (1249)
183 3fb4_A Adenylate kinase; psych 88.7 0.24 8.2E-06 44.0 3.2 24 162-185 2-25 (216)
184 1nn5_A Similar to deoxythymidy 88.7 0.26 9.1E-06 43.4 3.4 28 157-184 6-33 (215)
185 3nwj_A ATSK2; P loop, shikimat 88.7 0.24 8.3E-06 46.3 3.2 37 149-185 33-73 (250)
186 3dl0_A Adenylate kinase; phosp 88.6 0.25 8.5E-06 44.0 3.2 23 162-184 2-24 (216)
187 2gza_A Type IV secretion syste 88.6 0.13 4.6E-06 50.5 1.4 29 155-183 170-198 (361)
188 3qf4_A ABC transporter, ATP-bi 88.6 0.16 5.6E-06 53.2 2.2 32 152-183 361-392 (587)
189 2plr_A DTMP kinase, probable t 88.5 0.27 9.2E-06 43.1 3.3 27 159-185 3-29 (213)
190 1zuh_A Shikimate kinase; alpha 88.4 0.28 9.6E-06 41.8 3.2 25 161-185 8-32 (168)
191 2v54_A DTMP kinase, thymidylat 88.3 0.27 9.3E-06 43.0 3.2 25 159-183 3-27 (204)
192 3trf_A Shikimate kinase, SK; a 88.3 0.29 1E-05 42.2 3.4 26 160-185 5-30 (185)
193 1oix_A RAS-related protein RAB 88.3 0.23 7.9E-06 43.4 2.7 22 162-183 31-52 (191)
194 1vma_A Cell division protein F 88.2 2 6.8E-05 41.3 9.5 28 157-184 101-128 (306)
195 3kl4_A SRP54, signal recogniti 88.2 4.2 0.00014 41.0 12.3 26 159-184 96-121 (433)
196 1qhx_A CPT, protein (chloramph 88.1 0.31 1.1E-05 41.7 3.4 25 160-184 3-27 (178)
197 2f9l_A RAB11B, member RAS onco 88.1 0.27 9.3E-06 43.0 3.0 22 162-183 7-28 (199)
198 2c95_A Adenylate kinase 1; tra 88.0 0.31 1.1E-05 42.3 3.3 28 158-185 7-34 (196)
199 2qag_B Septin-6, protein NEDD5 87.8 0.23 8E-06 50.2 2.7 29 155-183 35-65 (427)
200 1vt4_I APAF-1 related killer D 87.8 1.1 3.8E-05 50.5 8.3 22 161-182 151-172 (1221)
201 3e70_C DPA, signal recognition 87.7 0.3 1E-05 47.6 3.3 28 157-184 126-153 (328)
202 3dm5_A SRP54, signal recogniti 87.7 2.6 8.9E-05 42.7 10.4 26 159-184 99-124 (443)
203 2jaq_A Deoxyguanosine kinase; 87.6 0.32 1.1E-05 42.3 3.2 24 162-185 2-25 (205)
204 1tev_A UMP-CMP kinase; ploop, 87.6 0.33 1.1E-05 41.9 3.2 26 160-185 3-28 (196)
205 2yvu_A Probable adenylyl-sulfa 87.5 0.35 1.2E-05 42.0 3.3 29 157-185 10-38 (186)
206 4f4c_A Multidrug resistance pr 87.5 0.25 8.6E-06 56.7 3.0 34 150-183 1094-1128(1321)
207 2bwj_A Adenylate kinase 5; pho 87.4 0.32 1.1E-05 42.3 3.1 27 158-184 10-36 (199)
208 2ewv_A Twitching motility prot 87.4 0.3 1E-05 48.2 3.2 28 157-184 133-160 (372)
209 2qz4_A Paraplegin; AAA+, SPG7, 87.4 2.3 7.8E-05 38.4 9.0 25 161-185 40-64 (262)
210 2p65_A Hypothetical protein PF 87.4 0.27 9.3E-06 41.7 2.5 27 158-184 41-67 (187)
211 2vp4_A Deoxynucleoside kinase; 87.4 0.15 5.1E-06 46.4 0.9 28 156-183 16-43 (230)
212 4b4t_J 26S protease regulatory 87.2 0.93 3.2E-05 45.5 6.6 23 163-185 185-207 (405)
213 1zd8_A GTP:AMP phosphotransfer 87.2 0.35 1.2E-05 43.6 3.2 27 158-184 5-31 (227)
214 2rhm_A Putative kinase; P-loop 87.2 0.36 1.2E-05 41.7 3.3 26 159-184 4-29 (193)
215 3sop_A Neuronal-specific septi 87.2 0.31 1.1E-05 45.9 3.0 22 162-183 4-25 (270)
216 1jjv_A Dephospho-COA kinase; P 87.1 0.31 1.1E-05 43.0 2.8 21 162-182 4-24 (206)
217 1odf_A YGR205W, hypothetical 3 87.1 0.35 1.2E-05 46.1 3.3 27 157-183 28-54 (290)
218 2vli_A Antibiotic resistance p 87.0 0.32 1.1E-05 41.8 2.8 26 159-184 4-29 (183)
219 1aky_A Adenylate kinase; ATP:A 86.9 0.39 1.3E-05 43.0 3.4 26 159-184 3-28 (220)
220 1svm_A Large T antigen; AAA+ f 86.8 0.33 1.1E-05 48.3 3.1 29 155-183 164-192 (377)
221 3d8b_A Fidgetin-like protein 1 86.8 2.7 9.2E-05 40.7 9.6 26 160-185 117-142 (357)
222 1xwi_A SKD1 protein; VPS4B, AA 86.7 1.9 6.4E-05 41.3 8.3 24 161-184 46-69 (322)
223 3cf0_A Transitional endoplasmi 86.7 0.41 1.4E-05 45.4 3.5 28 158-185 47-74 (301)
224 2wji_A Ferrous iron transport 86.7 0.36 1.2E-05 40.9 2.8 22 161-182 4-25 (165)
225 2iyv_A Shikimate kinase, SK; t 86.6 0.38 1.3E-05 41.6 3.1 25 161-185 3-27 (184)
226 3ozx_A RNAse L inhibitor; ATP 86.6 0.28 9.4E-06 51.1 2.5 29 154-182 19-47 (538)
227 3t61_A Gluconokinase; PSI-biol 86.6 0.39 1.3E-05 42.3 3.1 25 161-185 19-43 (202)
228 2cdn_A Adenylate kinase; phosp 86.5 0.43 1.5E-05 42.0 3.4 27 159-185 19-45 (201)
229 1q3t_A Cytidylate kinase; nucl 86.5 0.4 1.4E-05 43.6 3.3 26 158-183 14-39 (236)
230 3be4_A Adenylate kinase; malar 86.5 0.43 1.5E-05 42.8 3.4 27 159-185 4-30 (217)
231 2iw3_A Elongation factor 3A; a 86.4 0.25 8.7E-06 55.0 2.2 31 152-182 691-721 (986)
232 2pt7_A CAG-ALFA; ATPase, prote 86.3 0.16 5.5E-06 49.4 0.5 29 155-183 166-194 (330)
233 3ux8_A Excinuclease ABC, A sub 86.3 0.26 8.9E-06 52.4 2.1 28 153-180 341-368 (670)
234 3kta_A Chromosome segregation 86.2 0.52 1.8E-05 40.6 3.7 30 152-182 19-48 (182)
235 4b4t_I 26S protease regulatory 86.2 1.6 5.4E-05 44.3 7.7 23 163-185 219-241 (437)
236 3ux8_A Excinuclease ABC, A sub 86.0 0.37 1.3E-05 51.1 3.2 26 152-177 36-61 (670)
237 2zej_A Dardarin, leucine-rich 85.9 0.33 1.1E-05 41.9 2.3 21 162-182 4-24 (184)
238 3pfi_A Holliday junction ATP-d 85.9 1.4 4.6E-05 41.9 6.8 24 162-185 57-80 (338)
239 1via_A Shikimate kinase; struc 85.9 0.41 1.4E-05 41.2 2.8 24 162-185 6-29 (175)
240 1m7g_A Adenylylsulfate kinase; 85.8 0.46 1.6E-05 42.3 3.2 27 157-183 22-48 (211)
241 3euj_A Chromosome partition pr 85.8 0.5 1.7E-05 48.5 3.9 31 152-183 22-52 (483)
242 4eaq_A DTMP kinase, thymidylat 85.8 0.46 1.6E-05 43.4 3.3 35 150-184 15-50 (229)
243 3jvv_A Twitching mobility prot 85.7 0.44 1.5E-05 46.9 3.3 27 157-183 120-146 (356)
244 1nks_A Adenylate kinase; therm 85.7 0.45 1.5E-05 40.9 3.0 23 162-184 3-25 (194)
245 1ly1_A Polynucleotide kinase; 85.6 0.42 1.4E-05 40.7 2.8 21 162-182 4-24 (181)
246 1ukz_A Uridylate kinase; trans 85.6 0.46 1.6E-05 41.7 3.1 26 159-184 14-39 (203)
247 2w58_A DNAI, primosome compone 85.6 0.52 1.8E-05 41.3 3.4 24 161-184 55-78 (202)
248 3tlx_A Adenylate kinase 2; str 85.5 0.48 1.6E-05 43.6 3.3 26 159-184 28-53 (243)
249 2dyk_A GTP-binding protein; GT 85.5 0.43 1.5E-05 39.4 2.7 22 162-183 3-24 (161)
250 2chg_A Replication factor C sm 85.5 0.48 1.7E-05 41.1 3.2 24 161-184 39-62 (226)
251 1z2a_A RAS-related protein RAB 85.5 0.44 1.5E-05 39.6 2.8 22 162-183 7-28 (168)
252 3u61_B DNA polymerase accessor 85.5 1.7 5.7E-05 41.1 7.2 24 162-185 49-73 (324)
253 3t15_A Ribulose bisphosphate c 85.5 0.42 1.4E-05 45.3 2.9 23 163-185 39-61 (293)
254 3b9p_A CG5977-PA, isoform A; A 85.4 0.5 1.7E-05 44.1 3.4 26 160-185 54-79 (297)
255 1ni3_A YCHF GTPase, YCHF GTP-b 85.4 0.44 1.5E-05 47.6 3.1 27 156-182 16-42 (392)
256 3lw7_A Adenylate kinase relate 85.3 0.39 1.3E-05 40.3 2.4 19 162-180 3-21 (179)
257 4b4t_K 26S protease regulatory 85.3 1 3.4E-05 45.6 5.8 23 163-185 209-231 (428)
258 2ce2_X GTPase HRAS; signaling 85.2 0.45 1.5E-05 39.2 2.7 22 162-183 5-26 (166)
259 1in4_A RUVB, holliday junction 85.2 0.44 1.5E-05 46.0 3.0 24 161-184 52-75 (334)
260 4b4t_L 26S protease subunit RP 85.2 1.3 4.5E-05 44.9 6.6 24 162-185 217-240 (437)
261 2wjg_A FEOB, ferrous iron tran 85.2 0.46 1.6E-05 40.6 2.8 22 161-182 8-29 (188)
262 2z0h_A DTMP kinase, thymidylat 85.1 0.48 1.6E-05 41.1 2.9 23 162-184 2-24 (197)
263 1kao_A RAP2A; GTP-binding prot 85.1 0.47 1.6E-05 39.2 2.8 22 162-183 5-26 (167)
264 2pt5_A Shikimate kinase, SK; a 84.9 0.54 1.8E-05 39.8 3.1 23 162-184 2-24 (168)
265 2p5t_B PEZT; postsegregational 84.9 0.4 1.4E-05 44.3 2.4 29 156-184 28-56 (253)
266 1r8s_A ADP-ribosylation factor 84.9 0.56 1.9E-05 38.9 3.2 22 162-183 2-23 (164)
267 1j8m_F SRP54, signal recogniti 84.8 3 0.0001 39.7 8.6 27 158-184 96-122 (297)
268 2nzj_A GTP-binding protein REM 84.6 0.51 1.7E-05 39.6 2.8 21 162-182 6-26 (175)
269 3r20_A Cytidylate kinase; stru 84.6 0.53 1.8E-05 43.6 3.1 25 161-185 10-34 (233)
270 3vfd_A Spastin; ATPase, microt 84.6 2.3 7.7E-05 41.7 7.9 26 160-185 148-173 (389)
271 1lv7_A FTSH; alpha/beta domain 84.6 0.51 1.8E-05 43.2 3.0 23 163-185 48-70 (257)
272 1zak_A Adenylate kinase; ATP:A 84.6 0.54 1.8E-05 42.1 3.1 27 159-185 4-30 (222)
273 1u8z_A RAS-related protein RAL 84.6 0.51 1.8E-05 39.0 2.8 22 162-183 6-27 (168)
274 1z08_A RAS-related protein RAB 84.5 0.51 1.7E-05 39.4 2.7 22 162-183 8-29 (170)
275 2pbr_A DTMP kinase, thymidylat 84.4 0.57 2E-05 40.3 3.1 23 162-184 2-24 (195)
276 1njg_A DNA polymerase III subu 84.4 0.53 1.8E-05 41.2 2.9 24 162-185 47-70 (250)
277 4b4t_M 26S protease regulatory 84.4 0.7 2.4E-05 46.8 4.2 24 162-185 217-240 (434)
278 1tq4_A IIGP1, interferon-induc 84.3 0.35 1.2E-05 48.7 1.8 21 162-182 71-91 (413)
279 1ek0_A Protein (GTP-binding pr 84.3 0.54 1.8E-05 39.0 2.8 22 162-183 5-26 (170)
280 1e6c_A Shikimate kinase; phosp 84.2 0.55 1.9E-05 39.9 2.9 25 161-185 3-27 (173)
281 1e4v_A Adenylate kinase; trans 84.1 0.57 2E-05 41.7 3.1 23 162-184 2-24 (214)
282 1c1y_A RAS-related protein RAP 84.1 0.55 1.9E-05 38.9 2.8 22 162-183 5-26 (167)
283 1uf9_A TT1252 protein; P-loop, 84.1 0.58 2E-05 40.7 3.0 24 160-183 8-31 (203)
284 1ak2_A Adenylate kinase isoenz 84.0 0.65 2.2E-05 42.1 3.4 26 159-184 15-40 (233)
285 2f1r_A Molybdopterin-guanine d 83.9 0.3 1E-05 42.9 1.0 24 161-184 3-26 (171)
286 1hqc_A RUVB; extended AAA-ATPa 83.8 2.2 7.5E-05 40.0 7.2 25 161-185 39-63 (324)
287 1g16_A RAS-related protein SEC 83.7 0.56 1.9E-05 39.0 2.7 21 162-182 5-25 (170)
288 3g5u_A MCG1178, multidrug resi 83.7 0.45 1.5E-05 54.5 2.6 32 152-183 1051-1082(1284)
289 1wms_A RAB-9, RAB9, RAS-relate 83.7 0.58 2E-05 39.4 2.8 22 162-183 9-30 (177)
290 1r2q_A RAS-related protein RAB 83.6 0.59 2E-05 38.8 2.8 22 162-183 8-29 (170)
291 2grj_A Dephospho-COA kinase; T 83.5 0.66 2.2E-05 41.4 3.2 22 162-183 14-35 (192)
292 3uk6_A RUVB-like 2; hexameric 83.5 0.66 2.2E-05 44.6 3.4 26 160-185 70-95 (368)
293 3q85_A GTP-binding protein REM 83.5 0.62 2.1E-05 38.9 2.8 20 162-181 4-23 (169)
294 3g5u_A MCG1178, multidrug resi 83.5 0.47 1.6E-05 54.4 2.7 34 150-183 405-439 (1284)
295 2ged_A SR-beta, signal recogni 83.4 0.59 2E-05 40.2 2.8 23 161-183 49-71 (193)
296 2fn4_A P23, RAS-related protei 83.4 0.58 2E-05 39.3 2.7 23 161-183 10-32 (181)
297 1z0j_A RAB-22, RAS-related pro 83.4 0.61 2.1E-05 38.8 2.8 22 162-183 8-29 (170)
298 1ky3_A GTP-binding protein YPT 83.3 0.61 2.1E-05 39.3 2.8 22 162-183 10-31 (182)
299 3bc1_A RAS-related protein RAB 83.3 0.61 2.1E-05 39.6 2.8 22 162-183 13-34 (195)
300 3n70_A Transport activator; si 83.2 0.6 2.1E-05 39.1 2.6 26 159-184 23-48 (145)
301 3q72_A GTP-binding protein RAD 83.1 0.59 2E-05 38.9 2.6 20 162-181 4-23 (166)
302 3tqc_A Pantothenate kinase; bi 83.1 0.57 2E-05 45.5 2.8 22 162-183 94-115 (321)
303 1qf9_A UMP/CMP kinase, protein 83.1 0.73 2.5E-05 39.5 3.2 24 161-184 7-30 (194)
304 2px0_A Flagellar biosynthesis 83.1 0.7 2.4E-05 44.1 3.4 27 158-184 103-129 (296)
305 2erx_A GTP-binding protein DI- 83.0 0.66 2.3E-05 38.6 2.8 22 161-182 4-25 (172)
306 1upt_A ARL1, ADP-ribosylation 82.9 0.66 2.3E-05 38.7 2.8 24 159-182 6-29 (171)
307 1z0f_A RAB14, member RAS oncog 82.8 0.67 2.3E-05 38.9 2.8 22 162-183 17-38 (179)
308 4dsu_A GTPase KRAS, isoform 2B 82.8 0.66 2.2E-05 39.4 2.8 22 162-183 6-27 (189)
309 3ihw_A Centg3; RAS, centaurin, 82.8 0.64 2.2E-05 40.2 2.7 23 161-183 21-43 (184)
310 4b4t_H 26S protease regulatory 82.7 1.9 6.3E-05 44.1 6.5 24 162-185 245-268 (467)
311 3j16_B RLI1P; ribosome recycli 82.6 0.68 2.3E-05 48.9 3.3 30 153-182 366-400 (608)
312 2hxs_A RAB-26, RAS-related pro 82.5 0.66 2.2E-05 39.1 2.7 22 162-183 8-29 (178)
313 3syl_A Protein CBBX; photosynt 82.4 0.75 2.6E-05 43.0 3.2 25 160-184 67-91 (309)
314 1ex7_A Guanylate kinase; subst 82.4 0.72 2.5E-05 41.2 2.9 21 163-183 4-24 (186)
315 2y8e_A RAB-protein 6, GH09086P 82.3 0.69 2.4E-05 38.8 2.7 23 161-183 15-37 (179)
316 3clv_A RAB5 protein, putative; 82.2 0.7 2.4E-05 39.4 2.8 23 161-183 8-30 (208)
317 3dz8_A RAS-related protein RAB 82.2 0.78 2.7E-05 39.5 3.1 23 162-184 25-47 (191)
318 2qgz_A Helicase loader, putati 82.1 0.83 2.9E-05 43.7 3.5 25 160-184 152-176 (308)
319 1p9r_A General secretion pathw 82.1 0.75 2.6E-05 46.3 3.3 27 158-184 165-191 (418)
320 2oil_A CATX-8, RAS-related pro 82.1 0.72 2.4E-05 39.7 2.8 22 162-183 27-48 (193)
321 2a9k_A RAS-related protein RAL 82.1 0.73 2.5E-05 39.0 2.8 22 162-183 20-41 (187)
322 2oap_1 GSPE-2, type II secreti 82.1 0.49 1.7E-05 48.9 2.0 29 155-183 255-283 (511)
323 1m7b_A RND3/RHOE small GTP-bin 82.1 0.7 2.4E-05 39.6 2.7 22 162-183 9-30 (184)
324 3con_A GTPase NRAS; structural 82.0 0.73 2.5E-05 39.5 2.8 22 162-183 23-44 (190)
325 1m2o_B GTP-binding protein SAR 82.0 0.72 2.5E-05 40.0 2.8 25 159-183 22-46 (190)
326 1vht_A Dephospho-COA kinase; s 82.0 0.81 2.8E-05 40.7 3.2 23 160-182 4-26 (218)
327 2efe_B Small GTP-binding prote 82.0 0.72 2.5E-05 38.9 2.7 22 162-183 14-35 (181)
328 1mh1_A RAC1; GTP-binding, GTPa 81.8 0.75 2.6E-05 38.9 2.8 22 162-183 7-28 (186)
329 3kkq_A RAS-related protein M-R 81.8 0.75 2.6E-05 39.0 2.8 23 161-183 19-41 (183)
330 1uj2_A Uridine-cytidine kinase 81.8 0.77 2.6E-05 42.2 3.0 24 162-185 24-47 (252)
331 3ake_A Cytidylate kinase; CMP 81.8 0.84 2.9E-05 39.8 3.2 23 162-184 4-26 (208)
332 2r62_A Cell division protease 81.8 0.59 2E-05 42.9 2.2 23 163-185 47-69 (268)
333 2bme_A RAB4A, RAS-related prot 81.7 0.74 2.5E-05 39.1 2.7 22 162-183 12-33 (186)
334 3bwd_D RAC-like GTP-binding pr 81.6 0.78 2.7E-05 38.7 2.8 23 161-183 9-31 (182)
335 1gvn_B Zeta; postsegregational 81.6 0.86 2.9E-05 43.1 3.3 28 156-183 29-56 (287)
336 2g6b_A RAS-related protein RAB 81.6 0.78 2.7E-05 38.6 2.8 22 162-183 12-33 (180)
337 2cxx_A Probable GTP-binding pr 81.6 0.74 2.5E-05 39.2 2.7 21 162-182 3-23 (190)
338 3m6a_A ATP-dependent protease 81.4 0.83 2.9E-05 47.3 3.4 27 159-185 107-133 (543)
339 3c5c_A RAS-like protein 12; GD 81.3 0.79 2.7E-05 39.6 2.8 22 162-183 23-44 (187)
340 2gf9_A RAS-related protein RAB 81.3 0.8 2.7E-05 39.3 2.8 22 162-183 24-45 (189)
341 2ze6_A Isopentenyl transferase 81.1 0.81 2.8E-05 42.3 2.9 23 163-185 4-26 (253)
342 3tkl_A RAS-related protein RAB 81.1 0.82 2.8E-05 39.2 2.8 22 162-183 18-39 (196)
343 1ofh_A ATP-dependent HSL prote 81.1 0.87 3E-05 42.3 3.1 26 160-185 50-75 (310)
344 3tw8_B RAS-related protein RAB 81.1 0.79 2.7E-05 38.5 2.6 20 162-181 11-30 (181)
345 2iwr_A Centaurin gamma 1; ANK 81.0 0.6 2E-05 39.5 1.8 23 161-183 8-30 (178)
346 3pqc_A Probable GTP-binding pr 80.9 0.8 2.7E-05 39.0 2.7 22 162-183 25-46 (195)
347 2bov_A RAla, RAS-related prote 80.9 0.84 2.9E-05 39.5 2.8 22 162-183 16-37 (206)
348 2dhr_A FTSH; AAA+ protein, hex 80.9 0.76 2.6E-05 47.3 2.9 27 157-185 63-89 (499)
349 3gmt_A Adenylate kinase; ssgci 80.8 0.91 3.1E-05 42.0 3.1 25 161-185 9-33 (230)
350 2www_A Methylmalonic aciduria 80.8 0.87 3E-05 44.4 3.1 24 160-183 74-97 (349)
351 1nrj_B SR-beta, signal recogni 80.8 0.84 2.9E-05 40.2 2.8 23 161-183 13-35 (218)
352 2cjw_A GTP-binding protein GEM 80.7 0.97 3.3E-05 39.4 3.2 22 162-183 8-29 (192)
353 4f4c_A Multidrug resistance pr 80.7 0.76 2.6E-05 52.8 3.1 33 152-184 436-468 (1321)
354 2xb4_A Adenylate kinase; ATP-b 80.6 0.94 3.2E-05 40.8 3.1 23 162-184 2-24 (223)
355 2ffh_A Protein (FFH); SRP54, s 80.6 6.1 0.00021 39.7 9.4 26 159-184 97-122 (425)
356 1z06_A RAS-related protein RAB 80.5 0.88 3E-05 39.1 2.8 22 162-183 22-43 (189)
357 2lkc_A Translation initiation 80.5 1 3.5E-05 37.8 3.1 24 159-182 7-30 (178)
358 1svi_A GTP-binding protein YSX 80.4 0.86 2.9E-05 39.1 2.7 23 160-182 23-45 (195)
359 2fg5_A RAB-22B, RAS-related pr 80.4 0.85 2.9E-05 39.4 2.6 22 162-183 25-46 (192)
360 1vg8_A RAS-related protein RAB 80.4 0.88 3E-05 39.4 2.8 22 162-183 10-31 (207)
361 3t5g_A GTP-binding protein RHE 80.3 0.88 3E-05 38.5 2.7 22 162-183 8-29 (181)
362 1zd9_A ADP-ribosylation factor 80.3 0.9 3.1E-05 39.1 2.8 22 162-183 24-45 (188)
363 3reg_A RHO-like small GTPase; 80.3 0.9 3.1E-05 39.2 2.8 22 162-183 25-46 (194)
364 3t1o_A Gliding protein MGLA; G 80.2 0.97 3.3E-05 38.5 2.9 21 162-182 16-36 (198)
365 2p67_A LAO/AO transport system 80.1 0.74 2.5E-05 44.6 2.4 29 155-183 51-79 (341)
366 2atv_A RERG, RAS-like estrogen 80.1 0.91 3.1E-05 39.3 2.8 24 160-183 28-51 (196)
367 3a4m_A L-seryl-tRNA(SEC) kinas 80.1 1 3.5E-05 41.6 3.3 25 159-183 3-27 (260)
368 3cr8_A Sulfate adenylyltranfer 80.0 0.64 2.2E-05 48.5 2.0 29 156-184 365-393 (552)
369 2a5j_A RAS-related protein RAB 80.0 0.93 3.2E-05 39.0 2.8 22 162-183 23-44 (191)
370 2qnr_A Septin-2, protein NEDD5 79.8 0.77 2.6E-05 43.8 2.4 20 162-181 20-39 (301)
371 1x3s_A RAS-related protein RAB 79.5 1 3.4E-05 38.5 2.8 22 162-183 17-38 (195)
372 2p5s_A RAS and EF-hand domain 79.5 0.98 3.4E-05 39.3 2.8 23 161-183 29-51 (199)
373 1ega_A Protein (GTP-binding pr 79.5 0.83 2.8E-05 43.5 2.4 26 158-183 6-31 (301)
374 1fzq_A ADP-ribosylation factor 79.5 0.93 3.2E-05 38.9 2.6 22 160-181 16-37 (181)
375 3lxx_A GTPase IMAP family memb 79.4 0.98 3.3E-05 40.8 2.8 22 162-183 31-52 (239)
376 3oes_A GTPase rhebl1; small GT 79.4 0.96 3.3E-05 39.4 2.7 24 160-183 24-47 (201)
377 2fh5_B SR-beta, signal recogni 79.4 0.99 3.4E-05 39.6 2.8 23 161-183 8-30 (214)
378 1sxj_E Activator 1 40 kDa subu 79.3 0.86 2.9E-05 43.5 2.5 26 158-183 34-59 (354)
379 2ew1_A RAS-related protein RAB 79.3 0.97 3.3E-05 39.9 2.7 22 162-183 28-49 (201)
380 2qen_A Walker-type ATPase; unk 79.1 1.2 3.9E-05 42.0 3.3 24 160-183 31-54 (350)
381 2h17_A ADP-ribosylation factor 79.1 0.78 2.7E-05 39.2 1.9 22 161-182 22-43 (181)
382 2qmh_A HPR kinase/phosphorylas 79.0 1.3 4.4E-05 40.4 3.4 29 157-185 31-59 (205)
383 1a5t_A Delta prime, HOLB; zinc 78.9 5.2 0.00018 38.2 8.0 23 162-184 26-48 (334)
384 3thx_A DNA mismatch repair pro 78.9 1.2 4.1E-05 49.4 3.8 30 152-181 654-683 (934)
385 1gwn_A RHO-related GTP-binding 78.8 1 3.5E-05 39.8 2.7 23 161-183 29-51 (205)
386 1zbd_A Rabphilin-3A; G protein 78.8 1.1 3.8E-05 38.8 2.8 22 162-183 10-31 (203)
387 1a7j_A Phosphoribulokinase; tr 78.7 1 3.4E-05 42.8 2.7 24 160-183 5-28 (290)
388 2hf9_A Probable hydrogenase ni 78.7 1.2 4E-05 39.5 3.1 24 161-184 39-62 (226)
389 2atx_A Small GTP binding prote 78.6 1.1 3.6E-05 38.6 2.7 22 162-183 20-41 (194)
390 4fcw_A Chaperone protein CLPB; 78.4 1.1 3.7E-05 41.9 2.9 24 161-184 48-71 (311)
391 2gf0_A GTP-binding protein DI- 78.4 1.2 4E-05 38.3 2.9 23 161-183 9-31 (199)
392 1f6b_A SAR1; gtpases, N-termin 78.3 0.91 3.1E-05 39.7 2.2 22 160-181 25-46 (198)
393 1wb9_A DNA mismatch repair pro 78.3 1.3 4.5E-05 48.2 3.8 30 152-182 600-629 (800)
394 2bcg_Y Protein YP2, GTP-bindin 78.3 1.1 3.7E-05 39.1 2.7 22 162-183 10-31 (206)
395 4aby_A DNA repair protein RECN 78.3 0.57 1.9E-05 46.1 0.9 35 147-182 47-82 (415)
396 4bas_A ADP-ribosylation factor 78.2 1.1 3.7E-05 38.5 2.6 22 161-182 18-39 (199)
397 3umf_A Adenylate kinase; rossm 78.2 1.2 4E-05 40.7 3.0 23 163-185 32-54 (217)
398 1moz_A ARL1, ADP-ribosylation 78.1 0.79 2.7E-05 38.8 1.7 23 159-181 17-39 (183)
399 1qvr_A CLPB protein; coiled co 78.1 4.1 0.00014 44.3 7.8 25 160-184 191-215 (854)
400 1zj6_A ADP-ribosylation factor 78.0 1.2 4E-05 38.2 2.8 23 160-182 16-38 (187)
401 1np6_A Molybdopterin-guanine d 78.0 1.4 4.6E-05 38.8 3.2 23 161-183 7-29 (174)
402 2o52_A RAS-related protein RAB 77.9 1.2 4E-05 38.9 2.8 21 162-182 27-47 (200)
403 1gtv_A TMK, thymidylate kinase 77.8 0.56 1.9E-05 41.3 0.6 23 162-184 2-24 (214)
404 1ksh_A ARF-like protein 2; sma 77.7 1.2 4E-05 38.0 2.7 24 159-182 17-40 (186)
405 1udx_A The GTP-binding protein 77.7 1 3.6E-05 45.2 2.6 32 152-183 149-180 (416)
406 2ocp_A DGK, deoxyguanosine kin 77.6 1.3 4.6E-05 40.1 3.2 26 159-184 1-26 (241)
407 2fu5_C RAS-related protein RAB 77.6 0.82 2.8E-05 38.8 1.6 21 162-182 10-30 (183)
408 2orw_A Thymidine kinase; TMTK, 77.5 1.5 5.2E-05 38.5 3.4 26 159-184 2-27 (184)
409 2ce7_A Cell division protein F 77.5 1.1 3.9E-05 45.7 2.9 23 163-185 52-74 (476)
410 2fv8_A H6, RHO-related GTP-bin 77.5 1.3 4.4E-05 38.8 2.9 22 162-183 27-48 (207)
411 1sxj_C Activator 1 40 kDa subu 77.4 1.1 3.9E-05 42.8 2.7 22 163-184 49-70 (340)
412 3cbq_A GTP-binding protein REM 77.4 1 3.4E-05 39.4 2.2 20 162-181 25-44 (195)
413 3k53_A Ferrous iron transport 77.3 1.1 3.9E-05 41.4 2.7 21 162-182 5-25 (271)
414 2ohf_A Protein OLA1, GTP-bindi 77.3 1.1 3.9E-05 44.7 2.8 28 156-183 18-45 (396)
415 2zan_A Vacuolar protein sortin 77.3 2.8 9.6E-05 42.1 5.7 24 161-184 168-191 (444)
416 4gzl_A RAS-related C3 botulinu 77.2 1.2 4.2E-05 39.0 2.7 25 159-183 29-53 (204)
417 3hws_A ATP-dependent CLP prote 77.1 1.3 4.6E-05 42.8 3.2 26 160-185 51-76 (363)
418 3q3j_B RHO-related GTP-binding 77.1 1.3 4.3E-05 39.4 2.8 23 161-183 28-50 (214)
419 3cph_A RAS-related protein SEC 77.1 1.4 4.8E-05 38.3 3.0 22 161-182 21-42 (213)
420 2f7s_A C25KG, RAS-related prot 77.1 1.3 4.4E-05 38.9 2.8 21 162-182 27-47 (217)
421 2ga8_A Hypothetical 39.9 kDa p 76.8 1.3 4.5E-05 43.7 3.0 29 157-185 19-49 (359)
422 2il1_A RAB12; G-protein, GDP, 76.8 1.3 4.4E-05 38.3 2.7 20 162-181 28-47 (192)
423 2fna_A Conserved hypothetical 76.7 1.3 4.4E-05 41.7 2.9 24 161-184 31-54 (357)
424 3k1j_A LON protease, ATP-depen 76.7 1.1 3.8E-05 46.9 2.6 30 155-184 55-84 (604)
425 2z4s_A Chromosomal replication 76.7 1.3 4.4E-05 44.5 3.0 25 160-184 130-154 (440)
426 2r44_A Uncharacterized protein 76.6 0.94 3.2E-05 43.0 1.9 27 159-185 45-71 (331)
427 2q3h_A RAS homolog gene family 76.6 1.4 4.7E-05 38.1 2.8 22 161-182 21-42 (201)
428 2gco_A H9, RHO-related GTP-bin 76.6 1.4 4.8E-05 38.3 2.9 22 162-183 27-48 (201)
429 2hup_A RAS-related protein RAB 76.4 1.3 4.5E-05 38.7 2.7 21 162-182 31-51 (201)
430 2b6h_A ADP-ribosylation factor 76.3 1.3 4.4E-05 38.4 2.6 22 160-181 29-50 (192)
431 1xjc_A MOBB protein homolog; s 76.2 1.6 5.5E-05 38.3 3.1 22 162-183 6-27 (169)
432 3thx_B DNA mismatch repair pro 76.1 1.1 3.8E-05 49.6 2.5 31 152-182 665-695 (918)
433 2j0v_A RAC-like GTP-binding pr 76.1 1.4 4.7E-05 38.6 2.7 23 161-183 10-32 (212)
434 2h57_A ADP-ribosylation factor 76.0 1.1 3.8E-05 38.4 2.0 23 161-183 22-44 (190)
435 1ypw_A Transitional endoplasmi 75.9 1.4 4.6E-05 48.1 3.1 30 156-185 234-263 (806)
436 1sxj_D Activator 1 41 kDa subu 75.7 1.5 5E-05 41.6 2.9 23 162-184 60-82 (353)
437 2bjv_A PSP operon transcriptio 75.6 1.4 4.7E-05 40.4 2.7 25 160-184 29-53 (265)
438 4dkx_A RAS-related protein RAB 75.4 1.5 5.1E-05 39.7 2.8 22 161-182 14-35 (216)
439 2gno_A DNA polymerase III, gam 75.3 5.6 0.00019 37.9 7.0 74 160-245 18-94 (305)
440 2wsm_A Hydrogenase expression/ 75.3 1.6 5.6E-05 38.4 3.0 25 160-184 30-54 (221)
441 2g3y_A GTP-binding protein GEM 75.3 1.5 5.2E-05 39.3 2.8 21 161-181 38-58 (211)
442 2h92_A Cytidylate kinase; ross 75.2 1.7 5.7E-05 38.5 3.0 25 160-184 3-27 (219)
443 2j1l_A RHO-related GTP-binding 75.1 1.5 5.2E-05 38.7 2.7 22 161-182 35-56 (214)
444 2f6r_A COA synthase, bifunctio 75.0 1.4 4.9E-05 41.3 2.7 21 162-182 77-97 (281)
445 2c9o_A RUVB-like 1; hexameric 74.8 1.8 6.1E-05 43.6 3.5 26 160-185 63-88 (456)
446 1um8_A ATP-dependent CLP prote 74.7 1.7 5.7E-05 42.3 3.1 26 160-185 72-97 (376)
447 2qu8_A Putative nucleolar GTP- 74.3 1.6 5.4E-05 39.0 2.7 22 161-182 30-51 (228)
448 3llu_A RAS-related GTP-binding 74.3 1.6 5.4E-05 37.9 2.6 22 161-182 21-42 (196)
449 3cpj_B GTP-binding protein YPT 74.1 1.7 5.7E-05 38.6 2.7 22 162-183 15-36 (223)
450 2yc2_C IFT27, small RAB-relate 73.9 0.88 3E-05 39.3 0.8 23 161-183 21-43 (208)
451 1g8p_A Magnesium-chelatase 38 73.8 1.3 4.3E-05 42.1 2.0 25 161-185 46-70 (350)
452 2qag_C Septin-7; cell cycle, c 73.8 1.4 4.7E-05 44.4 2.3 20 163-182 34-53 (418)
453 1iqp_A RFCS; clamp loader, ext 73.6 2.1 7.2E-05 39.9 3.4 24 161-184 47-70 (327)
454 2xtp_A GTPase IMAP family memb 73.6 1.7 5.7E-05 39.7 2.7 23 161-183 23-45 (260)
455 1tue_A Replication protein E1; 73.5 1.6 5.6E-05 39.9 2.5 27 158-184 56-82 (212)
456 3co5_A Putative two-component 73.2 0.6 2.1E-05 39.1 -0.4 22 160-181 27-48 (143)
457 1ewq_A DNA mismatch repair pro 73.2 2 7E-05 46.5 3.6 23 160-182 576-598 (765)
458 3b1v_A Ferrous iron uptake tra 73.2 1.8 6.1E-05 40.6 2.8 22 161-182 4-25 (272)
459 3t5d_A Septin-7; GTP-binding p 72.4 1.8 6.1E-05 40.2 2.6 25 156-180 2-28 (274)
460 1ls1_A Signal recognition part 72.4 2.2 7.6E-05 40.5 3.3 26 159-184 97-122 (295)
461 3cf2_A TER ATPase, transitiona 72.3 4.6 0.00016 44.0 6.1 23 163-185 241-263 (806)
462 2x77_A ADP-ribosylation factor 72.1 1.4 4.7E-05 37.7 1.7 22 160-181 22-43 (189)
463 3lxw_A GTPase IMAP family memb 71.3 2.1 7.3E-05 39.2 2.8 22 161-182 22-43 (247)
464 1mky_A Probable GTP-binding pr 71.1 2 7E-05 42.9 2.8 23 161-183 181-203 (439)
465 3tqf_A HPR(Ser) kinase; transf 70.9 3.7 0.00013 36.6 4.1 27 158-184 14-40 (181)
466 1jal_A YCHF protein; nucleotid 70.9 2.3 7.9E-05 41.9 3.1 24 160-183 2-25 (363)
467 2chq_A Replication factor C sm 70.4 2.5 8.5E-05 39.2 3.1 23 162-184 40-62 (319)
468 3a1s_A Iron(II) transport prot 70.4 2.3 7.7E-05 39.4 2.8 21 162-182 7-27 (258)
469 2j37_W Signal recognition part 70.2 20 0.00068 36.8 10.1 27 158-184 99-125 (504)
470 1ltq_A Polynucleotide kinase; 70.1 2.3 7.7E-05 39.7 2.8 22 162-183 4-25 (301)
471 1ypw_A Transitional endoplasmi 70.0 1.9 6.4E-05 47.0 2.4 29 157-185 508-536 (806)
472 3upu_A ATP-dependent DNA helic 69.9 2.3 7.7E-05 42.8 2.9 23 162-184 47-69 (459)
473 1qhl_A Protein (cell division 69.9 0.8 2.7E-05 42.2 -0.4 23 161-183 28-50 (227)
474 3hu3_A Transitional endoplasmi 69.9 2.7 9.4E-05 42.9 3.5 26 160-185 238-263 (489)
475 1sxj_B Activator 1 37 kDa subu 69.9 2.6 9E-05 39.1 3.2 23 162-184 44-66 (323)
476 1sxj_A Activator 1 95 kDa subu 69.8 2.8 9.4E-05 42.9 3.5 25 161-185 78-102 (516)
477 3gj0_A GTP-binding nuclear pro 69.7 1.4 4.8E-05 38.9 1.2 20 162-181 17-36 (221)
478 3d3q_A TRNA delta(2)-isopenten 69.5 2.5 8.5E-05 41.4 2.9 24 162-185 9-32 (340)
479 3i8s_A Ferrous iron transport 69.4 2.1 7.1E-05 40.0 2.3 22 162-183 5-26 (274)
480 2dby_A GTP-binding protein; GD 69.3 2.3 7.7E-05 42.0 2.7 22 162-183 3-24 (368)
481 1jr3_A DNA polymerase III subu 69.3 2.8 9.7E-05 39.9 3.3 24 162-185 40-63 (373)
482 3zvl_A Bifunctional polynucleo 69.3 4.2 0.00014 40.4 4.7 25 160-184 258-282 (416)
483 1r6b_X CLPA protein; AAA+, N-t 68.7 8.2 0.00028 41.2 7.1 92 163-277 491-605 (758)
484 3pxg_A Negative regulator of g 68.7 3 0.0001 42.2 3.5 26 159-184 200-225 (468)
485 3th5_A RAS-related C3 botulinu 71.6 1 3.5E-05 39.2 0.0 23 159-181 29-51 (204)
486 3iby_A Ferrous iron transport 68.4 2.6 8.9E-05 39.0 2.8 22 162-183 3-24 (256)
487 4dhe_A Probable GTP-binding pr 68.2 1.3 4.5E-05 39.0 0.6 24 160-183 29-52 (223)
488 1nij_A Hypothetical protein YJ 67.8 2.3 7.9E-05 40.6 2.3 22 162-183 6-27 (318)
489 3nbx_X ATPase RAVA; AAA+ ATPas 67.8 1.9 6.6E-05 44.3 1.9 28 157-184 38-65 (500)
490 3v9p_A DTMP kinase, thymidylat 67.8 3 0.0001 38.2 3.0 27 158-184 23-49 (227)
491 2o8b_B DNA mismatch repair pro 67.8 3.1 0.00011 46.6 3.6 30 152-181 774-810 (1022)
492 1p5z_B DCK, deoxycytidine kina 67.7 1.5 5E-05 40.5 0.9 26 158-183 22-47 (263)
493 1g41_A Heat shock protein HSLU 67.5 3 0.0001 42.3 3.2 25 161-185 51-75 (444)
494 1wf3_A GTP-binding protein; GT 67.4 2.5 8.6E-05 40.2 2.5 24 160-183 7-30 (301)
495 4djt_A GTP-binding nuclear pro 67.3 2.4 8.1E-05 37.2 2.1 20 162-181 13-32 (218)
496 4edh_A DTMP kinase, thymidylat 66.9 3.6 0.00012 37.1 3.3 26 159-184 5-30 (213)
497 2ygr_A Uvrabc system protein A 66.8 2.2 7.5E-05 47.6 2.1 27 154-180 662-688 (993)
498 2olr_A Phosphoenolpyruvate car 66.7 4 0.00014 42.3 4.0 32 147-178 227-259 (540)
499 1w1w_A Structural maintenance 66.4 3.6 0.00012 40.9 3.5 26 157-182 23-48 (430)
500 2xxa_A Signal recognition part 65.8 19 0.00064 36.1 8.7 25 160-184 100-124 (433)
No 1
>3vr4_D V-type sodium ATPase subunit D; V-ATPase, rotary motor, P-loop, hydrolas ATPase, ATP binding; HET: MSE B3P; 2.17A {Enterococcus hirae} PDB: 3vr3_D* 3vr2_D* 3vr5_D 3vr6_D*
Probab=100.00 E-value=2.2e-108 Score=839.24 Aligned_cols=377 Identities=61% Similarity=1.031 Sum_probs=352.5
Q ss_pred cccccccceeeEEEEEECCEEEEecCCCCCCCcEEEEEeCCCceeeEEEEEEeCCeEEEEEccCCCCCccCCCEEEEcCC
Q 015796 12 EGTLEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGE 91 (400)
Q Consensus 12 ~~~~~~~~~~G~V~~I~G~lv~v~gl~~~~iGEl~~v~~~~g~~~~geVi~~~~~~~~l~~~~~~~Gl~~~g~~V~~tg~ 91 (400)
+......++||+|++|.|++++++|++.+++||+|+|..++|..+.|||++|+++.+.+++|++++|+++.|++|.+||+
T Consensus 3 ~~~~~~~~~~g~v~~v~g~~v~v~gl~~~~~ge~v~i~~~~g~~~~geVv~~~~~~~~~~~~~~~~gl~~~g~~V~~tg~ 82 (465)
T 3vr4_D 3 SGSSGMIKEYRTIKEVVGPLMAVEKVSGVKYEELIEVRMQNGEIRRGQVLEVQEDKAMVQIFEGTSGINLKNSSVRFLGH 82 (465)
T ss_dssp --------CBCCEEEEETTEEEEESCCSCCTTCEEEEECTTSCEEEEEEEEEESSEEEEEETTCCTTCCTTTCEEEECSS
T ss_pred CCCCcccceEEEEEEEECCEEEEecCCCCCcCCEEEEEcCCCCEEEEEEEEEeCCeEEEEEecCccccccCCCEEEECCC
Confidence 33444557899999999999999999999999999998666767899999999999999999999999856999999999
Q ss_pred eeeEeCCcCCcceEEcCCCCccCCCCCCCCCceecccCCCCCCCccCCcccccccceeeeeeeeeeccCceeeeecCCCC
Q 015796 92 VLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 171 (400)
Q Consensus 92 ~~~Vpvg~~lLGrV~D~lG~Pld~~~~~~~~~~~~i~~~~~~~~~R~~~~~~l~TGiraID~l~pigkGqr~~I~g~~G~ 171 (400)
+++||||++|||||+|++|+|||+.+++....++++++.||+|++|.++++||+||||+||+|+|||||||++|||++|+
T Consensus 83 ~~~vpvg~~lLGRV~d~lG~PiD~~~~i~~~~~~~i~~~~p~p~~R~~~~e~l~TGiraID~l~pigrGQr~~Ifgg~G~ 162 (465)
T 3vr4_D 83 PLQLGVSEDMIGRVFDGLGRPKDNGPEILPEKYLDINGEVINPIARDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGL 162 (465)
T ss_dssp CCEEEECGGGTTEEEETTSCBCSCCCCCCCSEEEESSCCCBCTTTEECCCCBCBCSCHHHHTTSCCBTTCBCCEEECTTS
T ss_pred cceeecchhhccceeccCCcccCCCCCCcccceeeccCcccCchhccCcccccccCceEEecccccccCCEEEEeCCCCc
Confidence 99999999999999999999999999998888999999999999999999999999999999999999999999999999
Q ss_pred ChhhhHHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccchHHHHHHHHHhhhcCCCccEEEEEeCCCCCHHHHHh
Q 015796 172 PHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERII 251 (400)
Q Consensus 172 GKt~L~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer~e~~~~~~~~l~~~g~l~~t~vv~~t~~~~~~~r~~ 251 (400)
|||+|++||++|+. +. +.+++++|||++||||.+|+.+|++++.++|+|+||++|++|+|+||.+|++
T Consensus 163 GKt~L~~~Ia~~~~-------~~-----~d~~~~~~V~~~iGeR~~Ev~e~~~~~~~~g~~~rtvvV~atsd~p~~~r~~ 230 (465)
T 3vr4_D 163 PHKELAAQIARQAT-------VL-----DSSDDFAVVFAAIGITFEEAEFFMEDFRQTGAIDRSVMFMNLANDPAIERIA 230 (465)
T ss_dssp CHHHHHHHHHHHCB-------CS-----SCSSCEEEEEEEEEECHHHHHHHHHHHHHHTGGGGEEEEEEETTSCHHHHHH
T ss_pred ChHHHHHHHHHHHH-------hc-----cCCCceEEEEEEecCCcHHHHHHHHHHhhcCCccceEEEEECCCCCHHHHHH
Confidence 99999999999975 21 0136789999999999999988999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhCCCeEEEEEcchhhHHHHHHHHHHhcCCCCCCCCCCCchhhhHHHHHHhccCCCCCCCceeEEee
Q 015796 252 TPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPI 331 (400)
Q Consensus 252 a~~~a~tiAEyfr~d~G~~Vlli~Dsltr~a~A~reisl~lg~~p~~~gyp~~~~~~l~~l~ERag~~~~~~GSiT~i~~ 331 (400)
+||+|+|+|||||+++|+|||+++||+||||+|+||||+++||||+++||||++|+.|++||||||++++++||||+|++
T Consensus 231 a~~~a~tiAEyfrd~~G~~VLl~~DslTr~A~A~REisl~lge~P~~~GYp~~vf~~l~~l~ERAg~~~~~~GSIT~i~t 310 (465)
T 3vr4_D 231 TPRMALTAAEYLAYEKGMHVLVIMTDMTNYAEALREISAARREVPGRRGYPGYLYTNLATLFERAGRIRGLKGSVTQIPI 310 (465)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHHHTTCCCCGGGSCTTHHHHHHHHHTSCEEETTCSCEEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHhhcCCCCccccCCchHHHHhHHHHHhhhccCCCCCcEEEEEE
Confidence 99999999999994479999999999999999999999999999999999999999999999999998767999999999
Q ss_pred EeecCCCCCCCcccccccccCeEEEecHhhhhcCCCCCcccCCCccccCccccCCCCCchhHHHhhhcC
Q 015796 332 LTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQV 400 (400)
Q Consensus 332 v~~~~~d~~dpi~~~~~~i~dg~i~L~r~la~~g~~PaID~l~S~SR~~~~~~~~~~~~~~h~~~~~~~ 400 (400)
|++|+||++||||+++++||||||+|||+||++||||||||+.|+||+|+.++|+.+|+++|.++|++|
T Consensus 311 v~~~~dD~~~pI~~~~~~i~dg~ivLsr~La~~g~yPAIdvl~S~SR~m~~~ig~~~~~~~h~~~a~~l 379 (465)
T 3vr4_D 311 LTMPEDDKTHPIPDLTGYITEGQIILTRELYKSGIQPPIDVLPSLSRLKDKGTGAGKTREDHAATMNQL 379 (465)
T ss_dssp EECGGGCTTSHHHHHHHHHSSEEEEBCHHHHHTTCSSCBCTTTCEETTGGGSCSTTTSCTTHHHHHHHH
T ss_pred EEecCCCcccchhHHHhhhcCeEEEEcHHHHhCCCCCCCCccccchhcchhhcCcccCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999874
No 2
>3gqb_B V-type ATP synthase beta chain; A3B3, V-ATPase, ATP synthesis, ATP-binding, hydrogen ION TRA hydrolase, ION transport; 2.80A {Thermus thermophilus HB8} PDB: 3a5c_D* 3a5d_D 3j0j_D*
Probab=100.00 E-value=8.5e-108 Score=834.78 Aligned_cols=378 Identities=59% Similarity=0.970 Sum_probs=354.9
Q ss_pred ccceeeEEEEEECCEEEEecCCCCCCCcEEEEEeCCCceeeEEEEEEeCCeEEEEEccCCCCCccCCCEEEEcCCeeeEe
Q 015796 17 VAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTP 96 (400)
Q Consensus 17 ~~~~~G~V~~I~G~lv~v~gl~~~~iGEl~~v~~~~g~~~~geVi~~~~~~~~l~~~~~~~Gl~~~g~~V~~tg~~~~Vp 96 (400)
..++||+|++|.|++++++|++.+++||+|+|..++|..+.|||++|+++.+.+++|++++|+++.|++|.+||++++||
T Consensus 4 ~~~~~g~V~~v~g~~v~v~gl~~~~~ge~v~i~~~~g~~~~geVv~~~~~~~~~~~~~~~~gl~~~g~~V~~tg~~~~vp 83 (464)
T 3gqb_B 4 LKKEYTGITYISGPLLFVENAKDLAYGAIVDIKDGTGRVRGGQVIEVSEEYAVIQVFEETTGLDLATTSVSLVEDVARLG 83 (464)
T ss_dssp -CCCBCCEEEEETTEEEEESCTTSCTTCEEEEECTTSCEEEEEEEEEESSEEEEEESSCCTTCCSSSCEEEEEESSCEEE
T ss_pred ccceeeEEEEEECCEEEEecCCCCCcCCEEEEEcCCCCEEEEEEEEEeCCeEEEEEecCccccccCCCEEEECCCCcEEE
Confidence 35689999999999999999999999999999876777789999999999999999999999985599999999999999
Q ss_pred CCcCCcceEEcCCCCccCCCCCCCCCceecccCCCCCCCccCCcccccccceeeeeeeeeeccCceeeeecCCCCChhhh
Q 015796 97 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEI 176 (400)
Q Consensus 97 vg~~lLGrV~D~lG~Pld~~~~~~~~~~~~i~~~~~~~~~R~~~~~~l~TGiraID~l~pigkGqr~~I~g~~G~GKt~L 176 (400)
||++|||||+|++|+|||+.+++....++++++.||+|++|.++++||+||||+||+|+|||||||++|||++|+|||+|
T Consensus 84 vg~~lLGRV~d~lG~PiD~~~~i~~~~~~~i~~~~p~p~~R~~~~e~l~TGiraID~l~pigrGQr~~Ifgg~G~GKt~L 163 (464)
T 3gqb_B 84 VSKEMLGRRFNGIGKPIDGLPPITPEKRLPITGLPLNPVARRKPEQFIQTGISTIDVMNTLVRGQKLPIFSGSGLPANEI 163 (464)
T ss_dssp ECSTTTTEEEETTCCBCSSSCCCCCSEEEETTCCCBCGGGBCCCCCBCBCSCHHHHTTSCCBTTCBCCEEEETTSCHHHH
T ss_pred eChHhcCCEeccCCcccCCCccccCcceeeccCCCCChhhccCccccccCcceeeecccccccCCEEEEecCCCCCchHH
Confidence 99999999999999999999999888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccchhhccccccccc-CCCCCeEEEEEEeccchHHHHHHHHHhhhcCCCccEEEEEeCCCCCHHHHHhHHHH
Q 015796 177 AAQICRQAGLVKRLEKTDNLLED-GEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRI 255 (400)
Q Consensus 177 ~~~i~~~~~~~~~~~~~d~~~~~-~~~~~~~~V~~~iGer~e~~~~~~~~l~~~g~l~~t~vv~~t~~~~~~~r~~a~~~ 255 (400)
++||++|+.+... +.++ ..+++++|||++||||.+++.+|++++.++|+|+||++|++|+|+||.+|+++||+
T Consensus 164 ~~~Ia~~~~a~~~------~~~~~~d~~~~~~V~~~iGeR~~Ev~e~~~~l~~~g~~~rtvvv~~t~d~p~~~r~~~~~~ 237 (464)
T 3gqb_B 164 AAQIARQATVRPD------LSGEGEKEEPFAVVFAAMGITQRELSYFIQEFERTGALSRSVLFLNKADDPTIERILTPRM 237 (464)
T ss_dssp HHHHHHHCBCCHH------HHCCCSTTCCEEEEEEEEEECHHHHHHHHHHHHHTSGGGGEEEEEEETTSCTHHHHHHHHH
T ss_pred HHHHHHHHHhccc------ccccccCCCceEEEEEEecCchHHHHHHHHHhhhcccccceEEEEECCCCCHHHHHHHHHH
Confidence 9999999763110 0000 01367899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhCCCeEEEEEcchhhHHHHHHHHHHhcCCCCCCCCCCCchhhhHHHHHHhccCCCCCCCceeEEeeEeec
Q 015796 256 ALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMP 335 (400)
Q Consensus 256 a~tiAEyfr~d~G~~Vlli~Dsltr~a~A~reisl~lg~~p~~~gyp~~~~~~l~~l~ERag~~~~~~GSiT~i~~v~~~ 335 (400)
|+|+|||||+++|+|||+++||+||||+|+||||+++||||+++||||++|+.|++||||||++++++||||+|++|++|
T Consensus 238 a~tiAEyfrd~~G~~VLl~~DdlTr~A~A~REisl~lge~P~~~GYp~~~f~~l~~l~ERag~~~~~~GSIT~l~~v~~~ 317 (464)
T 3gqb_B 238 ALTVAEYLAFEHDYHVLVILTDMTNYSEALREIGAAREEIPGRRGYPGYMYTDLATIYERAGVVEGKKGSVTQIPILSMP 317 (464)
T ss_dssp HHHHHHHHHHTTCCEEEEEEETHHHHHHHHHHHHHTTTCCBCGGGSBTTHHHHHHHHHTSCBCBTTCSCEEEEEEEEEET
T ss_pred HHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHhcCCCCccccCCchHHHHhHHHHHhhcccCCCCCcEEEEEEEEcc
Confidence 99999999954799999999999999999999999999999999999999999999999999987679999999999999
Q ss_pred CCCCCCCcccccccccCeEEEecHhhhhcCCCCCcccCCCccccCccccCCCCCchhHHHhhhcC
Q 015796 336 NDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQV 400 (400)
Q Consensus 336 ~~d~~dpi~~~~~~i~dg~i~L~r~la~~g~~PaID~l~S~SR~~~~~~~~~~~~~~h~~~~~~~ 400 (400)
+||++||||+++++|+||||+|||+||++||||||||+.|+||+|+.++|+.+|+++|.++|++|
T Consensus 318 ~dD~~~pi~~~~~~i~dg~ivLsr~La~~g~yPAIdvl~S~SR~m~~~ig~~~~~~~h~~~a~~l 382 (464)
T 3gqb_B 318 DDDRTHPIPDLTGYITEGQIQLSRELHRKGIYPPIDPLPSLSRLMNNGVGKGKTREDHKQVSDQL 382 (464)
T ss_dssp TSCTTSHHHHHHHHHSSEEEEBCHHHHHTTCSSCBCTTTCEETTGGGTSSTTTSCTTHHHHHHHH
T ss_pred CCCccCchhHHHhhhcCeEEEEcHHHHhCCCCCCcCcccchhhcchhhcCcccCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999874
No 3
>2c61_A A-type ATP synthase non-catalytic subunit B; hydrolase, H+ ATPase, A1AO, ATP synthesis, hydrogen ION transport, ION transport; 1.5A {Methanosarcina mazei GO1} PDB: 3dsr_A* 3b2q_A* 2rkw_A* 3eiu_A*
Probab=100.00 E-value=3.6e-107 Score=834.53 Aligned_cols=372 Identities=64% Similarity=1.065 Sum_probs=330.2
Q ss_pred cccceeeEEEEEECCEEEEecCCCCCCCcEEEEEeCCCceeeEEEEEEeCCeEEEEEccCCCCCccCCCEEEEcCCeeeE
Q 015796 16 EVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKT 95 (400)
Q Consensus 16 ~~~~~~G~V~~I~G~lv~v~gl~~~~iGEl~~v~~~~g~~~~geVi~~~~~~~~l~~~~~~~Gl~~~g~~V~~tg~~~~V 95 (400)
+..+.||+|++|.|++++++|++.+++||+|+|..+++..+.|||++++++.+.+++|++++||+ .|++|.+||++++|
T Consensus 9 ~~~~~~g~V~~V~g~vv~v~g~~~~~~ge~v~i~~~~g~~~~geV~~~~~~~v~~~~~~~t~gl~-~G~~V~~tg~~l~v 87 (469)
T 2c61_A 9 PMVKEYKTITQIAGPLIFVEKTEPVGYNEIVNIKMGDGTVRRGQVLDSSADIVVVQVFEGTGGLD-KDCGVIFTGETLKL 87 (469)
T ss_dssp -------------CCEEEEECCSCCCTTCEEEEECTTSCEEEEEEEEECSSEEEEEEC--------------CEEEBCEE
T ss_pred cccccccEEEEEECcEEEEeeCCCCCcCCEEEEEeCCCCEEEEEEEEEeCCEEEEEEeCCCcCCC-CCCEEEEcCCCcEE
Confidence 45788999999999999999998899999999975455567899999999999999999999998 49999999999999
Q ss_pred eCCcCCcceEEcCCCCccCCCCCCCCCceecccCCCCCCCccCCcccccccceeeeeeeeeeccCceeeeecCCCCChhh
Q 015796 96 PVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNE 175 (400)
Q Consensus 96 pvg~~lLGrV~D~lG~Pld~~~~~~~~~~~~i~~~~~~~~~R~~~~~~l~TGiraID~l~pigkGqr~~I~g~~G~GKt~ 175 (400)
|||++|||||+|++|+|||+.+++....++++++.||+|++|.++++||+||||+||+|+|||||||++|||++|+|||+
T Consensus 88 pvg~~lLGRV~d~lG~PiDg~~~i~~~~~~~i~~~~p~p~~R~~~~e~l~TGir~ID~l~pigrGQr~~Ifgg~G~GKt~ 167 (469)
T 2c61_A 88 PASVDLLGRILSGSGEPRDGGPRIVPDQLLDINGAAMNPYARLPPKDFIQTGISTIDGTNTLVRGQKLPIFSASGLPHNE 167 (469)
T ss_dssp EECGGGTTCEEETTSCBSSSCCCCCCSEEEESSSCSSCCBCSCCCCSBCBCSCHHHHTTSCCBTTCBCCEEECTTSCHHH
T ss_pred EccccceeeEEcccCCCCCCCCCCCccccccccCccCCcccccccccccceeeEeeeeeeccccCCEEEEECCCCCCHHH
Confidence 99999999999999999999999888888999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccchHHHHHHHHHhhhcCCCccEEEEEeCCCCCHHHHHhHHHH
Q 015796 176 IAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRI 255 (400)
Q Consensus 176 L~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer~e~~~~~~~~l~~~g~l~~t~vv~~t~~~~~~~r~~a~~~ 255 (400)
|++||++++.. ++++++++|||++||||.+|+.+|++++.++++|+||++|++|+|+||.+|++++|+
T Consensus 168 Ll~~Ia~~~~~------------n~~~~~~~~V~~~iGER~~Ev~e~~~~~~~~g~m~rtvvV~~tsd~p~~~r~~~~~~ 235 (469)
T 2c61_A 168 IALQIARQASV------------PGSESAFAVVFAAMGITNEEAQYFMSDFEKTGALERAVVFLNLADDPAVERIVTPRM 235 (469)
T ss_dssp HHHHHHHHCBC------------TTCSSCEEEEEEEEEECHHHHHHHHHHHHHHSGGGGEEEEEEETTSCHHHHHHHHHH
T ss_pred HHHHHHHHHhh------------ccCCCCcEEEEEEccCCcHHHHHHHHHHHhccCccceEEEEECCCCCHHHHHHHHHH
Confidence 99999999762 123355799999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhCCCeEEEEEcchhhHHHHHHHHHHhcCCCCCCCCCCCchhhhHHHHHHhccCCCCCCCceeEEeeEeec
Q 015796 256 ALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMP 335 (400)
Q Consensus 256 a~tiAEyfr~d~G~~Vlli~Dsltr~a~A~reisl~lg~~p~~~gyp~~~~~~l~~l~ERag~~~~~~GSiT~i~~v~~~ 335 (400)
|+|+|||||+|+|+|||+++||+||||+|+||||+++||||+++||||++|+.|++||||||++++++||||+|++|++|
T Consensus 236 a~tiAEyfrdd~G~dVLl~~DsltR~A~A~rEis~~lge~P~~~Gyp~~l~~~l~~l~ERAg~~~~~~GSIT~i~~v~~~ 315 (469)
T 2c61_A 236 ALTAAEYLAYEHGMHVLVILTDITNYAEALRQMGAARNEVPGRRGYPGYMYTDLATLYERAGIVKGAKGSVTQIPILSMP 315 (469)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECHHHHHHHHTTSGGGTTCCTTSTTCCTHHHHHHHHHHTSCEEBTTSSCEEEEEEEEECC
T ss_pred HHHHHHHHHHhcCCeEEEEEeCHHHHHHHHHHHHHhcCCCCcccCcCchhhhhhhhHHhhccccCCCCCceeeeeeeecC
Confidence 99999999966999999999999999999999999999999999999999999999999999987678999999999999
Q ss_pred CCCCCCCcccccccccCeEEEecHhhhhcCCCCCcccCCCccccCccccCCCCCchhHHHhhhcC
Q 015796 336 NDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQV 400 (400)
Q Consensus 336 ~~d~~dpi~~~~~~i~dg~i~L~r~la~~g~~PaID~l~S~SR~~~~~~~~~~~~~~h~~~~~~~ 400 (400)
+||++||||+++++||||||+|||+||++||||||||+.|+||+|+.++|+.+++++|.++|++|
T Consensus 316 ~dD~~dPI~~~~~~i~dg~ivLsr~La~~g~yPAIdvl~S~SR~~~~~ig~~~~~~~~~~~a~~l 380 (469)
T 2c61_A 316 GDDITHPIPDLSGYITEGQIVVARELHRKGIYPPINVLPSLSRLMNSGIGAGKTREDHKAVSDQM 380 (469)
T ss_dssp SCTTTSCCCCCGGGGTTEEEEBCHHHHHTTCSSCBCTTTCEETTGGGSCSTTTSCTTHHHHHHHH
T ss_pred CCCcCcchHHHHhhccCcEEEEcHHHHhCCCCCccCccccccccchhhcccccCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999864
No 4
>3oaa_A ATP synthase subunit alpha; rossmann fold, hydrolase, hydrolase-transport PROT complex; HET: ANP ADP; 3.26A {Escherichia coli DH1} PDB: 2a7u_A
Probab=100.00 E-value=2e-103 Score=808.01 Aligned_cols=356 Identities=24% Similarity=0.399 Sum_probs=338.0
Q ss_pred ccceeeEEEEEECCEEEEecCCCCCCCcEEEEEeCCCceeeEEEEEEeCCeEEEEEccCCCCCccCCCEEEEcCCeeeEe
Q 015796 17 VAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTP 96 (400)
Q Consensus 17 ~~~~~G~V~~I~G~lv~v~gl~~~~iGEl~~v~~~~g~~~~geVi~~~~~~~~l~~~~~~~Gl~~~g~~V~~tg~~~~Vp 96 (400)
..+.+|+|++|.|++++++|++++.+||+|+|. ++ ..|+|++++++.+.+++|++++||+. |++|.+||++++||
T Consensus 24 ~~~~~G~V~~v~g~i~~v~Gl~~~~~gElv~~~--~~--~~g~v~~l~~d~v~~~~~~~~~gi~~-G~~V~~tg~~~~Vp 98 (513)
T 3oaa_A 24 EAHNEGTIVSVSDGVIRIHGLADCMQGEMISLP--GN--RYAIALNLERDSVGAVVMGPYADLAE-GMKVKCTGRILEVP 98 (513)
T ss_dssp CCTTEEEEEEEETTEEEEEECTTCBTTCEEEET--TT--EEEEEEEECSSCEEEEESSCCSSCCT-TCEEECCSCSSEEE
T ss_pred CceeEEEEEEEECcEEEEECCccCCcCCEEEEC--CC--CEEEEEEeeCCEEEEEEeCCccCCCC-CCEEEEcCCCCeEe
Confidence 467789999999999999999999999999993 44 68999999999999999999999985 99999999999999
Q ss_pred CCcCCcceEEcCCCCccCCCCCCCCCceecccCCCCCCCccCCcccccccceeeeeeeeeeccCceeeeecCCCCChhhh
Q 015796 97 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEI 176 (400)
Q Consensus 97 vg~~lLGrV~D~lG~Pld~~~~~~~~~~~~i~~~~~~~~~R~~~~~~l~TGiraID~l~pigkGqr~~I~g~~G~GKt~L 176 (400)
||++|||||+|++|+|||+++++....++|++..||+|++|.++++||+||||+||+|+|||||||++|||++|+|||+|
T Consensus 99 vG~~lLGRV~d~lG~PiDg~g~i~~~~~~pi~~~ap~~~~R~~v~epl~TGikaID~l~PigrGQR~~Ifg~~g~GKT~l 178 (513)
T 3oaa_A 99 VGRGLLGRVVNTLGAPIDGKGPLDHDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGKTAL 178 (513)
T ss_dssp CSGGGTTCEEETTSCBTTCSCSCCCSCEEESSCCCCCSSSCCCCCCBCCCSCHHHHHHSCCBTTCBCEEEESSSSSHHHH
T ss_pred eCHHHhccchhhcCcCccCCCCCCccceeecccCCCCccccCCcCcccccceeeeccccccccCCEEEeecCCCCCcchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -HHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccchHHHHHHHHHhhhcCCCccEEEEEeCCCCCHHHHHhHHHH
Q 015796 177 -AAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRI 255 (400)
Q Consensus 177 -~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer~e~~~~~~~~l~~~g~l~~t~vv~~t~~~~~~~r~~a~~~ 255 (400)
+.+|++|.. .+++|||++||||.+++.+|+++|.++|+|+||++|++|+|+||.+|+++||+
T Consensus 179 ~l~~I~n~~~-----------------~dv~~V~~~IGeR~~ev~e~~~~l~~~g~m~~tvvV~atad~p~~~r~~a~~~ 241 (513)
T 3oaa_A 179 AIDAIINQRD-----------------SGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQYLAPYA 241 (513)
T ss_dssp HHHHHHTTSS-----------------SSCEEEEEEESCCHHHHHHHHHHHHHHSCSTTEEEEEECTTSCHHHHHHHHHH
T ss_pred HHHHHHhhcc-----------------CCceEEEEEecCChHHHHHHHHHHhhcCcccceEEEEECCCCChHHHHHHHHH
Confidence 678877643 34589999999999999989999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhCCCeEEEEEcchhhHHHHHHHHHHhcCCCCCCCCCCCchhhhHHHHHHhccCCC-------------CC
Q 015796 256 ALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIE-------------GR 322 (400)
Q Consensus 256 a~tiAEyfr~d~G~~Vlli~Dsltr~a~A~reisl~lg~~p~~~gyp~~~~~~l~~l~ERag~~~-------------~~ 322 (400)
|||+||||| |+|+|||+++||+||||+|+||||+++||||+++||||++|+.|++|+||||+++ ++
T Consensus 242 a~tiAEyfr-d~G~dVLli~Dsltr~A~A~REisl~lgepP~r~gYP~~vf~~~srLlERAg~~~~~~~~~~~~~~~~g~ 320 (513)
T 3oaa_A 242 GCAMGEYFR-DRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGK 320 (513)
T ss_dssp HHHHHHHHH-HTTCEEEEEEETHHHHHHHHHHHHHHTTCCBCTTSCBTTHHHHHHHHHTTCSEECHHHHHHHHTTSCCSC
T ss_pred HHHHHHHHH-hcCCCEEEEecChHHHHHHHHHHHHhcCCCCcccCCCchhhhhcchHHHHHhhcccccchhccccccCCC
Confidence 999999999 8999999999999999999999999999999999999999999999999999873 35
Q ss_pred CCceeEEeeEeecCCCCCCCcccccccccCeEEEecHhhhhcCCCCCcccCCCccccCccccCCCCCchhHHHhhhcC
Q 015796 323 KGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQV 400 (400)
Q Consensus 323 ~GSiT~i~~v~~~~~d~~dpi~~~~~~i~dg~i~L~r~la~~g~~PaID~l~S~SR~~~~~~~~~~~~~~h~~~~~~~ 400 (400)
+||||+||+|++|+||++||||++++|||||||||||+||++||||||||+.|+||+|+.++ .++|+++|.+|
T Consensus 321 ~GSITal~~V~~~~dD~s~pIp~~~~si~DGqIvLsr~La~~giyPAIdvl~SvSRv~~~~~-----~~~~~~va~~l 393 (513)
T 3oaa_A 321 TGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETNLFNAGIRPAVNPGISVSRVGGAAQ-----TKIMKKLSGGI 393 (513)
T ss_dssp CEEEEECCEEECGGGCCSSHHHHHHHHHSSEEEEECHHHHTTSCCSCBCTTTCEESSGGGGS-----CHHHHHHHHHH
T ss_pred CcceEEEEEEEcCCCCccCcchHhhhccCCeEEEEehhHHhCCCCCccCccccccccCcccc-----cHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999998755 37999998763
No 5
>2qe7_A ATP synthase subunit alpha; blockage of ATP hydrolysis, F1-ATPase, single analysis, thermoalkaliphilic, hydrolase; 3.06A {Bacillus SP} PDB: 1sky_B
Probab=100.00 E-value=1.4e-101 Score=796.46 Aligned_cols=355 Identities=26% Similarity=0.398 Sum_probs=337.0
Q ss_pred cceeeEEEEEECCEEEEecCCCCCCCcEEEEEeCCCceeeEEEEEEeCCeEEEEEccCCCCCccCCCEEEEcCCeeeEeC
Q 015796 18 AMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPV 97 (400)
Q Consensus 18 ~~~~G~V~~I~G~lv~v~gl~~~~iGEl~~v~~~~g~~~~geVi~~~~~~~~l~~~~~~~Gl~~~g~~V~~tg~~~~Vpv 97 (400)
.+.+|+|++|.|++++++|++.+.+||+|+|. +| ..|+|++++++.+.+++|+++.||+ .|++|.+||++++|||
T Consensus 25 ~~~~G~V~~v~g~iv~v~gl~~~~~ge~~~i~--~g--~~g~v~~l~~~~v~~~~~~~~~gi~-~G~~V~~tg~~~~vpv 99 (502)
T 2qe7_A 25 VVEVGTVIQVGDGIARVHGLEKVMAGELLEFE--NG--VMGMAQNLEEDNVGVVILGPYTEIR-EGTQVKRTGRIMEVPV 99 (502)
T ss_dssp --CEEEEEEEETTEEEEECCTTCBTTEEEEET--TS--CEEEEEEEETTEEEEEECSCCSSCC-TTCEEEEEEEESEEEC
T ss_pred eeEEEEEEEecCcEEEEEECCCCCCCCEEEEC--CC--CEEEEEEecCCeEEEEEecCccCCc-CCCEEEEeCCcceEEc
Confidence 45789999999999999999889999999994 34 3699999999999999999999998 5999999999999999
Q ss_pred CcCCcceEEcCCCCccCCCCCCCCCceecccCCCCCCCccCCcccccccceeeeeeeeeeccCceeeeecCCCCChhhh-
Q 015796 98 SLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEI- 176 (400)
Q Consensus 98 g~~lLGrV~D~lG~Pld~~~~~~~~~~~~i~~~~~~~~~R~~~~~~l~TGiraID~l~pigkGqr~~I~g~~G~GKt~L- 176 (400)
|++|||||+|++|+|||+++++....++|++..||+|++|.++++||+||||+||+|+|||||||++|||++|+|||+|
T Consensus 100 G~~lLGRVvd~lG~PiDg~g~i~~~~~~pi~~~~p~~~~R~~v~epl~TGiraID~l~PigrGQR~~Ifg~~g~GKT~La 179 (502)
T 2qe7_A 100 GEALLGRVVNPLGQPLDGRGPIETAEYRPIESPAPGVMDRKSVHEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTTIA 179 (502)
T ss_dssp SGGGTTCEECTTCCBSSCSCCCCCCCEEESSCCCCCTTSBCCCCSBCCCSCHHHHHSSCCBTTCBCEEEECSSSCHHHHH
T ss_pred ccccceEEEccCCCCCCCCCCCCCCceeeccCCCCCcccccCCCCccccceeecccccccccCCEEEEECCCCCCchHHH
Confidence 9999999999999999999999888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccchHHHHHHHHHhhhcCCCccEEEEEeCCCCCHHHHHhHHHHH
Q 015796 177 AAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIA 256 (400)
Q Consensus 177 ~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer~e~~~~~~~~l~~~g~l~~t~vv~~t~~~~~~~r~~a~~~a 256 (400)
+.+|++|++ .+++|||++||||.+++.+|++++.+.++|+||++|++|+|+||.+|+++||+|
T Consensus 180 l~~I~~~~~-----------------~dv~~V~~~iGeR~~Ev~~~~~~~~~~g~m~~tvvV~atad~p~~~r~~a~~~a 242 (502)
T 2qe7_A 180 IDTIINQKG-----------------QDVICIYVAIGQKQSTVAGVVETLRQHDALDYTIVVTASASEPAPLLYLAPYAG 242 (502)
T ss_dssp HHHHHGGGS-----------------CSEEEEEEEESCCHHHHHHHHHHHHHTTCSTTEEEEEECTTSCHHHHHHHHHHH
T ss_pred HHHHHHhhc-----------------CCcEEEEEECCCcchHHHHHHHHHhhCCCcceeEEEEECCCCCHHHHHHHHHHH
Confidence 789988864 346899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhCCCeEEEEEcchhhHHHHHHHHHHhcCCCCCCCCCCCchhhhHHHHHHhccCCCC--CCCceeEEeeEee
Q 015796 257 LTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEG--RKGSITQIPILTM 334 (400)
Q Consensus 257 ~tiAEyfr~d~G~~Vlli~Dsltr~a~A~reisl~lg~~p~~~gyp~~~~~~l~~l~ERag~~~~--~~GSiT~i~~v~~ 334 (400)
||+||||| |+|+|||+++||+||||+|+||||+++||||+++||||++|+.|++|+||||+++. .+||||+|++|++
T Consensus 243 ~tiAEyfr-d~G~dVLl~~Dsltr~A~A~REisl~lgepP~~~gYpg~vf~~~~rL~ERAg~~~~~~~~GSITal~~v~~ 321 (502)
T 2qe7_A 243 CAMGEYFM-YKGKHALVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDEKGGGSLTALPFIET 321 (502)
T ss_dssp HHHHHHHH-TTTCEEEEEEECHHHHHHHHHHHHTTTTCCCCSTTSCTTHHHHHHHHHTSCCBBCTTTTCCEEEEEEEEEC
T ss_pred HHHHHHHH-HcCCcEEEEEecHHHHHHHHHHHHHhcCCCCccCCCCchHHHHHHHHHHhhhcccccCCCcceeEEEEEEc
Confidence 99999999 89999999999999999999999999999999999999999999999999999853 3799999999999
Q ss_pred cCCCCCCCcccccccccCeEEEecHhhhhcCCCCCcccCCCccccCccccCCCCCchhHHHhhhcC
Q 015796 335 PNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQV 400 (400)
Q Consensus 335 ~~~d~~dpi~~~~~~i~dg~i~L~r~la~~g~~PaID~l~S~SR~~~~~~~~~~~~~~h~~~~~~~ 400 (400)
|+||++||||++++|||||||||||+||++||||||||+.|+||+|+.++ .++|.++|++|
T Consensus 322 ~~dD~s~pI~~~~~si~DgqI~Lsr~La~~g~~PAIdvl~S~SRv~~~~~-----~~~~~~~a~~l 382 (502)
T 2qe7_A 322 QAGDVSAYIPTNVISITDGQIFLESDLFYSGVRPAVNVGISVSRVGGAAQ-----IKAMKKVAGTL 382 (502)
T ss_dssp STTCCSSHHHHHHHTTSSEEEEECHHHHTTTCSSCBCTTTCEESSGGGGS-----CHHHHHHHHHH
T ss_pred cCCCcccchhHHHhhhcCcEEEEehhHhhCCCCceeCcccccccCCCccC-----CHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999864 59999999764
No 6
>2r9v_A ATP synthase subunit alpha; TM1612, structural genomics, JOI for structural genomics, JCSG, protein structure initiative ATP synthesis; HET: ATP PG4; 2.10A {Thermotoga maritima MSB8}
Probab=100.00 E-value=7.7e-102 Score=798.52 Aligned_cols=356 Identities=27% Similarity=0.380 Sum_probs=338.0
Q ss_pred cceeeEEEEEECCEEEEecCCCCCCCcEEEEEeCCCceeeEEEEEEeCCeEEEEEccCCCCCccCCCEEEEcCCeeeEeC
Q 015796 18 AMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPV 97 (400)
Q Consensus 18 ~~~~G~V~~I~G~lv~v~gl~~~~iGEl~~v~~~~g~~~~geVi~~~~~~~~l~~~~~~~Gl~~~g~~V~~tg~~~~Vpv 97 (400)
.+.+|+|++|.|++++++|++.+.+||+|+|. .+| ..|+|++++++.+.+++|+++.||+ .|++|.+||++++|||
T Consensus 37 ~~~~G~V~~V~g~iv~v~gl~~~~~gEl~~i~-~~g--~~g~v~~l~~~~v~~~~~~~~~gi~-~G~~V~~tg~~~~vpv 112 (515)
T 2r9v_A 37 LEDTGKVIQVGDGIARAYGLNKVMVSELVEFV-ETG--VKGVAFNLEEDNVGIIILGEYKDIK-EGHTVRRLKRIIEVPV 112 (515)
T ss_dssp TTTEEEEEEEETTEEEEEECTTCCTTEEEEET-TTC--CEEEEEECCTTCEEEEEESCCTTCC-TTCEEEEEEEECEEEE
T ss_pred ceeeeEEEEEECcEEEEecCCCCCCCCEEEEe-cCC--eEEEEEEecCCeEEEEEecCccccc-CCCEEEEeCCcceeec
Confidence 45789999999999999999899999999995 334 3699999999999999999999998 5999999999999999
Q ss_pred CcCCcceEEcCCCCccCCCCCCCCCceecccCCCCCCCccCCcccccccceeeeeeeeeeccCceeeeecCCCCChhhh-
Q 015796 98 SLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEI- 176 (400)
Q Consensus 98 g~~lLGrV~D~lG~Pld~~~~~~~~~~~~i~~~~~~~~~R~~~~~~l~TGiraID~l~pigkGqr~~I~g~~G~GKt~L- 176 (400)
|++|||||+|++|+|||+++++....++|++..||+|++|.++++||+||||+||+|+|||||||++|||++|+|||+|
T Consensus 113 G~~lLGRVvd~lG~PiDg~g~i~~~~~~pi~~~~P~~~~R~~v~epl~TGiraID~l~PigrGQR~~I~g~~g~GKT~La 192 (515)
T 2r9v_A 113 GEELLGRVVNPLGEPLDGKGPINAKNFRPIEIKAPGVIYRKPVDTPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTAIA 192 (515)
T ss_dssp SGGGTTCEECTTSCBCSSSCCCCCSEEEESCCCCCCGGGBCCCCSEECCSCHHHHHHSCEETTCBEEEEEETTSSHHHHH
T ss_pred CccceeeEEcCCCCCcCCCCCCCccceeecccCCCCcccccCCCcchhcCccccccccccccCCEEEEEcCCCCCccHHH
Confidence 9999999999999999999998888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccchHHHHHHHHHhhhcCCCccEEEEEeCCCCCHHHHHhHHHHH
Q 015796 177 AAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIA 256 (400)
Q Consensus 177 ~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer~e~~~~~~~~l~~~g~l~~t~vv~~t~~~~~~~r~~a~~~a 256 (400)
+.+|++|++ .+++|||++||||.+++.+|++++.+.++|+||++|++|+|+||.+|+++||+|
T Consensus 193 l~~I~~~~~-----------------~dv~~V~~~IGeR~~Ev~e~~~~~~~~g~m~rtvvV~atad~p~~~r~~a~~~a 255 (515)
T 2r9v_A 193 IDTIINQKG-----------------QGVYCIYVAIGQKKSAIARIIDKLRQYGAMEYTTVVVASASDPASLQYIAPYAG 255 (515)
T ss_dssp HHHHHTTTT-----------------TTEEEEEEEESCCHHHHHHHHHHHHHTTGGGGEEEEEECTTSCHHHHHHHHHHH
T ss_pred HHHHHHhhc-----------------CCcEEEEEEcCCCcHHHHHHHHHHHhCCCcceeEEEEECCCCCHHHHHHHHHHH
Confidence 789988754 346899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhCCCeEEEEEcchhhHHHHHHHHHHhcCCCCCCCCCCCchhhhHHHHHHhccCCCC--CCCceeEEeeEee
Q 015796 257 LTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEG--RKGSITQIPILTM 334 (400)
Q Consensus 257 ~tiAEyfr~d~G~~Vlli~Dsltr~a~A~reisl~lg~~p~~~gyp~~~~~~l~~l~ERag~~~~--~~GSiT~i~~v~~ 334 (400)
||+||||| |+|+|||+++||+||||+|+||||+++||||+++||||++|+.|++|+||||+++. .+||||+||+|++
T Consensus 256 ~tiAEyfr-d~G~dVLli~DslTr~A~A~REisl~lgepP~r~gYp~~vf~~~~rLlERAg~~~~~~~~GSITal~~v~~ 334 (515)
T 2r9v_A 256 CAMGEYFA-YSGRDALVVYDDLSKHAVAYRQLSLLMRRPPGREAYPGDIFYLHSRLLERAVRLNDKLGGGSLTALPIVET 334 (515)
T ss_dssp HHHHHHHH-TTTCEEEEEEETHHHHHHHHHHHHHTSCCCTTCCCCCCCHHHHHHHHHTTCEEBCTTTTSCEEEEEEEEEE
T ss_pred HHHHHHHH-HcCCcEEEEeccHHHHHHHHHHHhhhcCCCCCcccCChhHHHHhHHHHHHHhhccccCCCcceEEeeeeec
Confidence 99999999 89999999999999999999999999999999999999999999999999999853 3799999999999
Q ss_pred cCCCCCCCcccccccccCeEEEecHhhhhcCCCCCcccCCCccccCccccCCCCCchhHHHhhhcC
Q 015796 335 PNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQV 400 (400)
Q Consensus 335 ~~~d~~dpi~~~~~~i~dg~i~L~r~la~~g~~PaID~l~S~SR~~~~~~~~~~~~~~h~~~~~~~ 400 (400)
|+||++||||++++|||||||||||+||++||||||||+.|+||+|+.+ ++++|.++|++|
T Consensus 335 ~~~D~s~pI~~~~~si~DGqI~Lsr~La~~g~yPAIdvl~SvSRv~~~~-----~~~~~~~~a~~l 395 (515)
T 2r9v_A 335 QANDISAYIPTNVISITDGQIYLEPGLFYAGQRPAINVGLSVSRVGGSA-----QIKAMKQVAGML 395 (515)
T ss_dssp STTCTTSHHHHHHHHTSSEEEEBCHHHHHHTCSSCBCTTTCEEGGGTTT-----SCHHHHHHHHHH
T ss_pred cCCCccccchhhhccccceEEEEchHHHhCCCCCeeccccccccCCccc-----CCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999986 459999999764
No 7
>2ck3_A ATP synthase subunit alpha\, mitochondrial; hydrolase; HET: ANP ADP; 1.9A {Bos taurus} SCOP: a.69.1.1 b.49.1.1 c.37.1.11 PDB: 1bmf_A* 1e1q_A* 1e1r_A* 1e79_A* 1h8h_A* 1nbm_A* 1ohh_A* 1qo1_A 1w0j_A* 1w0k_A* 1h8e_A* 2jdi_A* 2wss_A* 2w6j_A 2w6e_A 2w6g_A 2w6f_A 2w6h_A 2w6i_A 1cow_A* ...
Probab=100.00 E-value=6e-101 Score=792.94 Aligned_cols=363 Identities=26% Similarity=0.393 Sum_probs=340.1
Q ss_pred cceeeEEEEEECCEEEEecCCCCCCCcEEEEEeCCCceeeEEEEEEeCCeEEEEEccCCCCCccCCCEEEEcCCeeeEeC
Q 015796 18 AMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPV 97 (400)
Q Consensus 18 ~~~~G~V~~I~G~lv~v~gl~~~~iGEl~~v~~~~g~~~~geVi~~~~~~~~l~~~~~~~Gl~~~g~~V~~tg~~~~Vpv 97 (400)
.+.+|+|++|.|++++++|++.+.+||+|+|. +| ..|+|++++++.+.+++|+++.||+ .|+.|.+||++++|||
T Consensus 25 ~~~~G~V~~v~g~iv~v~gl~~~~~ge~~~i~--~g--~~g~v~~l~~~~v~~~~~~~~~gi~-~G~~V~~tg~~~~vpv 99 (510)
T 2ck3_A 25 LEETGRVLSIGDGIARVHGLRNVQAEEMVEFS--SG--LKGMSLNLEPDNVGVVVFGNDKLIK-EGDIVKRTGAIVDVPV 99 (510)
T ss_dssp CSSEEEEEEEETTEEEEEECTTCBTTCEEEET--TS--CEEEEEEECSSCEEEEESSCGGGCC-TTCEEEECCCCCEEEE
T ss_pred eeEEeEEEEEECcEEEEeeCCCCCCCCEEEEC--CC--CeEEEEeccCCeEEEEEECCccccc-CCCEEEEeCCcceeec
Confidence 45789999999999999999889999999994 34 3699999999999999999999998 5999999999999999
Q ss_pred CcCCcceEEcCCCCccCCCCCCCCCceecccCCCCCCCccCCcccccccceeeeeeeeeeccCceeeeecCCCCChhhh-
Q 015796 98 SLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEI- 176 (400)
Q Consensus 98 g~~lLGrV~D~lG~Pld~~~~~~~~~~~~i~~~~~~~~~R~~~~~~l~TGiraID~l~pigkGqr~~I~g~~G~GKt~L- 176 (400)
|++|||||+|++|+|||+++++....++|++..||+|++|.++++||+||||+||+|+|||||||++|||++|+|||+|
T Consensus 100 g~~lLGRVvd~lG~PiDg~g~i~~~~~~pi~~~~p~~~~R~~v~epl~TGiraID~l~PigrGQR~~I~g~~g~GKT~La 179 (510)
T 2ck3_A 100 GEELLGRVVDALGNAIDGKGPIGSKARRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIA 179 (510)
T ss_dssp SGGGTTCEECTTSCBCSSSCCCCCSEEEESSCCCCCSTTBCCCCSBCCCSCHHHHHHSCCBTTCBCEEEESTTSSHHHHH
T ss_pred CccceeeEEccCCcCcCCCCCCCccceeecccCCCCcccccccCccccccceeeccccccccCCEEEEecCCCCCchHHH
Confidence 9999999999999999999999888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccchHHHHHHHHHhhhcCCCccEEEEEeCCCCCHHHHHhHHHHH
Q 015796 177 AAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIA 256 (400)
Q Consensus 177 ~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer~e~~~~~~~~l~~~g~l~~t~vv~~t~~~~~~~r~~a~~~a 256 (400)
+.+|++|+.++.. .+ + +.+++|||++||||.+++.+|++++.+.|+|+||++|++|+|+||.+|+++||+|
T Consensus 180 l~~I~~q~~~~~~---~~----~--~~d~~~V~~~IGeR~~Ev~~~~~~~~~~g~m~~tvvV~atad~p~~~r~~a~~~a 250 (510)
T 2ck3_A 180 IDTIINQKRFNDG---TD----E--KKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSG 250 (510)
T ss_dssp HHHHHHTHHHHTS---CC----T--TTCCEEEEEEESCCHHHHHHHHHHHHHTTCGGGEEEEEECTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHhhccc---cc----c--CCCeEEEEEECCCCcHHHHHHHHHHHhcCCcccceEEEECCCCCHHHHHHHHHHH
Confidence 7899998763210 01 0 1336899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhCCCeEEEEEcchhhHHHHHHHHHHhcCCCCCCCCCCCchhhhHHHHHHhccCCCC--CCCceeEEeeEee
Q 015796 257 LTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEG--RKGSITQIPILTM 334 (400)
Q Consensus 257 ~tiAEyfr~d~G~~Vlli~Dsltr~a~A~reisl~lg~~p~~~gyp~~~~~~l~~l~ERag~~~~--~~GSiT~i~~v~~ 334 (400)
||+||||| |+|+|||+++||+||||+|+||||+++||||+++||||++|+.|++|+||||+++. .+||||+|++|++
T Consensus 251 ~tiAEyfr-d~G~dVLli~Dsltr~A~A~REisl~lgepP~r~gYpg~vf~~~~rLlERAg~~~~~~~~GSITal~~v~~ 329 (510)
T 2ck3_A 251 CSMGEYFR-DNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIET 329 (510)
T ss_dssp HHHHHHHH-TTTCEEEEEEETHHHHHHHHHHHHHHTTCCCCGGGCCTTHHHHHHHHHTTCEEBCGGGTSCEEEEEEEEEC
T ss_pred HHHHHHHH-HcCCcEEEEEcCHHHHHHHHHHHHHhcCCCCccCCcCchHHHhhHHHHHhhhcccccCCCcceeEeeeecc
Confidence 99999999 89999999999999999999999999999999999999999999999999999853 3799999999999
Q ss_pred cCCCCCCCcccccccccCeEEEecHhhhhcCCCCCcccCCCccccCccccCCCCCchhHHHhhhcC
Q 015796 335 PNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQV 400 (400)
Q Consensus 335 ~~~d~~dpi~~~~~~i~dg~i~L~r~la~~g~~PaID~l~S~SR~~~~~~~~~~~~~~h~~~~~~~ 400 (400)
|+||++||||++++|||||||||||+||++||||||||+.|+||+|+.++ .++|.++|++|
T Consensus 330 ~~dD~s~pI~~~~~si~DgqI~Lsr~La~~gi~PAIdvl~SvSRv~~~~~-----~~~~~~~a~~l 390 (510)
T 2ck3_A 330 QAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQ-----TRAMKQVAGTM 390 (510)
T ss_dssp STTCTTSHHHHHHHHHSSEEEEBCHHHHHHTCSSCBCTTTCEESSGGGGS-----CHHHHHHHHHH
T ss_pred CCCCccccchHhhhcccceEEEEehhHhhCCCCCcccchhcccccccccC-----CHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999864 59999999764
No 8
>1fx0_A ATP synthase alpha chain; latent ATPase, thermal stability, potential tentoxin binding hydrolase; 3.20A {Spinacia oleracea} SCOP: a.69.1.1 b.49.1.1 c.37.1.11 PDB: 1kmh_A*
Probab=100.00 E-value=2e-101 Score=796.00 Aligned_cols=355 Identities=27% Similarity=0.398 Sum_probs=337.9
Q ss_pred cceeeEEEEEECCEEEEecCCCCCCCcEEEEEeCCCceeeEEEEEEeCCeEEEEEccCCCCCccCCCEEEEcCCeeeEeC
Q 015796 18 AMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPV 97 (400)
Q Consensus 18 ~~~~G~V~~I~G~lv~v~gl~~~~iGEl~~v~~~~g~~~~geVi~~~~~~~~l~~~~~~~Gl~~~g~~V~~tg~~~~Vpv 97 (400)
.+.+|+|++|.|++++++|++.+.+||+|+|. +| ..|+|++++++.+.+++|+++.||+ .|+.|.+||++++|||
T Consensus 26 ~~~~G~V~~v~g~iv~v~gl~~~~~ge~~~i~--~g--~~g~v~~l~~~~v~~~~~~~~~gi~-~G~~V~~tg~~~~vpv 100 (507)
T 1fx0_A 26 VVNTGTVLQVGDGIARIHGLDEVMAGELVEFE--EG--TIGIALNLESNNVGVVLMGDGLMIQ-EGSSVKATGRIAQIPV 100 (507)
T ss_dssp TTTEEEECCCCSSEEEEEECTTCCTTCCEEET--TC--CEEEEEEECSSEEEEEECSCGGGCC-TTCEEECCCCCCEEEE
T ss_pred eeEEEEEEEEeCCEEEEEECCCccCCCEEEEC--CC--ceEEEEeccCCeEEEEEecCccCCc-CCCEEEEeCCcceeec
Confidence 55789999999999999999889999999994 34 3699999999999999999999998 5999999999999999
Q ss_pred CcCCcceEEcCCCCccCCCCCCCCCceecccCCCCCCCccCCcccccccceeeeeeeeeeccCceeeeecCCCCChhhh-
Q 015796 98 SLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEI- 176 (400)
Q Consensus 98 g~~lLGrV~D~lG~Pld~~~~~~~~~~~~i~~~~~~~~~R~~~~~~l~TGiraID~l~pigkGqr~~I~g~~G~GKt~L- 176 (400)
|++|||||+|++|+|||+++++....++|++..||+|++|.++++||+||||+||+|+|||||||++|||++|+|||+|
T Consensus 101 G~~lLGRVvd~lG~PiDg~g~i~~~~~~pi~~~~p~~~~R~~v~epl~TGiraID~l~PigrGQR~~Ifg~~g~GKT~La 180 (507)
T 1fx0_A 101 SEAYLGRVINALAKPIDGRGEITASESRLIESPAPGIMSRRSVYEPLQTGLIAIDAMIPVGRGQRELIIGDRQTGKTAVA 180 (507)
T ss_dssp SSSCSSCCCCSSSCCSSSSCCCCCSEEEESSCCCCCSSSBCCCCSBCCCSCTTTTTTSCCBTTCBCBEEESSSSSHHHHH
T ss_pred CccceeEEEccCCcCCCCCCCCCCCceeeccCCCCCcccccccCCcccccceecccccccccCCEEEEecCCCCCccHHH
Confidence 9999999999999999999999888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccchHHHHHHHHHhhhcCCCccEEEEEeCCCCCHHHHHhHHHHH
Q 015796 177 AAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIA 256 (400)
Q Consensus 177 ~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer~e~~~~~~~~l~~~g~l~~t~vv~~t~~~~~~~r~~a~~~a 256 (400)
+.+|++|++ .+++|||++||||.+++.+|++++.+.++|+||++|++|+|+||.+|+++||+|
T Consensus 181 l~~I~~~~~-----------------~dv~~V~~~iGeR~~Ev~~~~~~~~~~g~m~rtvvV~atad~p~~~r~~a~~~a 243 (507)
T 1fx0_A 181 TDTILNQQG-----------------QNVICVYVAIGQKASSVAQVVTNFQERGAMEYTIVVAETADSPATLQYLAPYTG 243 (507)
T ss_dssp HHHHHTCCT-----------------TTCEEEEEEESCCHHHHHHHHHHTGGGTGGGSEEEEEECTTSCGGGTTHHHHHH
T ss_pred HHHHHHhhc-----------------CCcEEEEEEcCCCchHHHHHHHHHHhcCccccceEEEECCCCCHHHHHHHHHHH
Confidence 788887753 345899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhCCCeEEEEEcchhhHHHHHHHHHHhcCCCCCCCCCCCchhhhHHHHHHhccCCCC--CCCceeEEeeEee
Q 015796 257 LTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEG--RKGSITQIPILTM 334 (400)
Q Consensus 257 ~tiAEyfr~d~G~~Vlli~Dsltr~a~A~reisl~lg~~p~~~gyp~~~~~~l~~l~ERag~~~~--~~GSiT~i~~v~~ 334 (400)
||+||||| |+|+|||+++||+||||+|+||||+++||||+++||||++|+.|++|+||||+++. .+||||+|++|++
T Consensus 244 ~tiAEyfr-d~G~dVLli~Dsltr~A~A~REisl~lge~P~~~gYp~~vf~~~srLlERAg~~~~~~~~GSITal~~v~~ 322 (507)
T 1fx0_A 244 AALAEYFM-YRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVET 322 (507)
T ss_dssp HHHHHHHH-HTTCEEEEEEECHHHHHHHHHHHHHHTTCCCCGGGCCSCSSTTTTTTGGGCCBBCTTTTSCEEEECCEEEC
T ss_pred HHHHHHHH-HcCCcEEEEEecHHHHHHHHHHHHHhcCCCCccccCCchHhhhhHHHHHhhhhccccCCCcceeeeeeeec
Confidence 99999999 79999999999999999999999999999999999999999999999999999853 3799999999999
Q ss_pred cCCCCCCCcccccccccCeEEEecHhhhhcCCCCCcccCCCccccCccccCCCCCchhHHHhhhcC
Q 015796 335 PNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQV 400 (400)
Q Consensus 335 ~~~d~~dpi~~~~~~i~dg~i~L~r~la~~g~~PaID~l~S~SR~~~~~~~~~~~~~~h~~~~~~~ 400 (400)
|+||++||||++++|||||||||||+||++||||||||+.|+||+|+.++ .++|.++|++|
T Consensus 323 ~~~D~s~pI~~~~~si~DgqIvLsr~La~~g~yPAIdvl~S~SR~~~~~~-----~~~~~~~a~~l 383 (507)
T 1fx0_A 323 QAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQ-----IKAMKKVAGKL 383 (507)
T ss_dssp STTCTTSHHHHHHHTTSSCBCCCCSSSSSSSCSSCCCTTTCCCTTGGGGS-----CHHHHHHHHHH
T ss_pred cCCCcccchHHHHHhhcCcEEEEehhHhhCCCCCccchhhhhccccccCC-----CHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999864 59999999764
No 9
>1fx0_B ATP synthase beta chain; latent ATPase, thermal stability, potential tentoxin binding hydrolase; 3.20A {Spinacia oleracea} SCOP: a.69.1.1 b.49.1.1 c.37.1.11 PDB: 1kmh_B*
Probab=100.00 E-value=1.3e-99 Score=780.98 Aligned_cols=358 Identities=25% Similarity=0.396 Sum_probs=333.1
Q ss_pred eeEEEEEECCEEEEecCC--CCCCCcEEEEEeCC--Cc--eeeEEEEE-EeCCeEEEEEccCCCCCccCCCEEEEcCCee
Q 015796 21 YRTVTGVAGPLVILDKVK--GPKYYEIVNIRLGD--GT--MRRGQVLE-VDGEKAVVQVFEGTSGIDNKFTTVQFTGEVL 93 (400)
Q Consensus 21 ~G~V~~I~G~lv~v~gl~--~~~iGEl~~v~~~~--g~--~~~geVi~-~~~~~~~l~~~~~~~Gl~~~g~~V~~tg~~~ 93 (400)
+|+|++|.|++|++++++ .+.+|+.|+|...+ |. .+.+||++ ++++.+.+++|++++||+ .|++|.+||+++
T Consensus 20 ~G~v~~V~G~vv~v~~~~~~~~~i~~~~~i~~~~~~g~~~~~~~eV~~~~~~~~v~~~~~~~t~Gl~-~G~~V~~tg~~~ 98 (498)
T 1fx0_B 20 LGRIAQIIGPVLNVAFPPGKMPNIYNALIVKGRDTAGQPMNVTCEVQQLLGNNRVRAVAMSATDGLT-RGMEVIDTGAPL 98 (498)
T ss_dssp CEEEEEEETTEEEEECCSSCCCCTTCEEEECCCSSSSCCCCCEEEEEECCSSSCEEEEESSCCTTCC-TTCEEEECSSSC
T ss_pred CceEEEEEccEEEEEeCCCCccccccEEEEEeCCCCCcccceEEEEEEEecCCeEEEEEecCccCCC-CCCEEEecCCcc
Confidence 699999999999999884 57999999996433 33 46899999 888888899999999998 599999999999
Q ss_pred eEeCCcCCcceEEcCCCCccCCCCCCCCCceecccCCCCCCCccCCcccccccceeeeeeeeeeccCceeeeecCCCCCh
Q 015796 94 KTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPH 173 (400)
Q Consensus 94 ~Vpvg~~lLGrV~D~lG~Pld~~~~~~~~~~~~i~~~~~~~~~R~~~~~~l~TGiraID~l~pigkGqr~~I~g~~G~GK 173 (400)
+||||++|||||+|++|+|||+.+++....+||+++.||+|++|.++++||+||||+||+|+||+||||++|||++|+||
T Consensus 99 ~vpvG~~lLGRV~d~lG~PiD~~~~i~~~~~~pi~~~~p~~~~r~~~~e~l~TGirvID~l~pigkGqr~gIfgg~GvGK 178 (498)
T 1fx0_B 99 SVPVGGPTLGRIFNVLGEPVDNLRPVDTRTTSPIHRSAPAFTQLDTKLSIFETGIKVVNLLAPYRRGGKIGLFGGAGVGK 178 (498)
T ss_dssp EEEESSTTTTCEECTTSCBCSSSSCCCCSEEEESCCCCCCGGGCCCCCCCCCCSCTTHHHHSCCCTTCCEEEEECSSSSH
T ss_pred eEecCccceeeEEcccccCCCCcCCcCCCceeccccCCCchhhhcccccccccceeEeeeecccccCCeEEeecCCCCCc
Confidence 99999999999999999999999988888899999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccchHHHHHHHHHhhhcCCCc-------cEEEEEeCCCCCH
Q 015796 174 NEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSME-------RVTLFLNLANDPT 246 (400)
Q Consensus 174 t~L~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer~e~~~~~~~~l~~~g~l~-------~t~vv~~t~~~~~ 246 (400)
|+|++||+++..+ + .+.+|||++||||.+|+.+|++++.+.++++ ||++|++|+|+||
T Consensus 179 T~L~~~l~~~~a~------~---------~~~v~V~~~iGER~rEv~e~~~~~~~~~~l~~~~l~~~rtvvV~~t~d~p~ 243 (498)
T 1fx0_B 179 TVLIMELINNIAK------A---------HGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPP 243 (498)
T ss_dssp HHHHHHHHHHTTT------T---------CSSCEEEEEESCCSHHHHHHHHHHHHTTSSCSSTTCCCCEEEEEECTTSCH
T ss_pred hHHHHHHHHHHHh------h---------CCCEEEEEEcccCcHHHHHHHHhhhcccccccccccccceEEEEeCCCCCH
Confidence 9999999987431 1 1128999999999999999999999999998 9999999999999
Q ss_pred HHHHhHHHHHHHHHHHhhhhCCCeEEEEEcchhhHHHHHHHHHHhcCCCCCCCCCCCchhhhHHHHHHhccCCCCCCCce
Q 015796 247 IERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSI 326 (400)
Q Consensus 247 ~~r~~a~~~a~tiAEyfr~d~G~~Vlli~Dsltr~a~A~reisl~lg~~p~~~gyp~~~~~~l~~l~ERag~~~~~~GSi 326 (400)
++|++++|+|+|+|||||+++|+||||++||+||||+|+||||+++||||+++||||++|++|++||||||+ .++|||
T Consensus 244 ~~R~~~~~~altiAEyfrd~~G~dVLl~~DsitR~A~A~rEvs~~lge~Ps~~GYpp~l~~~l~~L~ERag~--~~~GSI 321 (498)
T 1fx0_B 244 GARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITS--TKEGSI 321 (498)
T ss_dssp HHHTTHHHHHHHTHHHHTTTSCCEEEEEEECSHHHHHHHHHHHHHHTCCCCGGGCCTTHHHHHHHTSSSSSC--CTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcEEEEeccHHHHHHHHHHHHhhcCCCCccccCCchhhhHHHHHHHhccC--CCCCce
Confidence 999999999999999999439999999999999999999999999999999999999999999999999997 468999
Q ss_pred eEEeeEeecCCCCCCCcccccccccCeEEEecHhhhhcCCCCCcccCCCccccCccccCCCCCchhHHHhhhcC
Q 015796 327 TQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQV 400 (400)
Q Consensus 327 T~i~~v~~~~~d~~dpi~~~~~~i~dg~i~L~r~la~~g~~PaID~l~S~SR~~~~~~~~~~~~~~h~~~~~~~ 400 (400)
|+|++|++|+||++||||+++++|+||||+|||+||++||||||||+.|+||+|+..+ +.++|.++|+++
T Consensus 322 T~i~tV~v~~dD~tdPi~d~~~~ilDG~ivLsR~La~~giyPAID~l~S~SR~~~~~i----~~~~h~~~a~~l 391 (498)
T 1fx0_B 322 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI----VGEEHYEIAQRV 391 (498)
T ss_dssp CCEEEEECGGGCSSSHHHHHHHTTCSEEEEBCSTTTTTTCSSCBCSSSCCBTTCSTTT----TCHHHHHHHHHH
T ss_pred eeeEEEEccCCCcCCcchHHHHHhhCceEEehhhHHhCCCCceeccccccccCCCccc----CCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999987643 668999999864
No 10
>2ck3_D ATP synthase subunit beta\, mitochondrial; hydrolase; HET: ANP ADP; 1.9A {Bos taurus} SCOP: a.69.1.1 b.49.1.1 c.37.1.11 PDB: 1cow_D* 1bmf_D* 1e1q_D* 1e1r_D* 1efr_D* 1e79_D* 1h8h_D* 1ohh_D* 1qo1_D 1w0j_D* 1w0k_D* 1h8e_D* 2jdi_D* 2jiz_D* 2jj1_D* 2jj2_D* 2v7q_D* 2wss_D* 2w6j_D 2w6e_D ...
Probab=100.00 E-value=2.4e-98 Score=769.13 Aligned_cols=358 Identities=27% Similarity=0.405 Sum_probs=332.3
Q ss_pred eeeEEEEEECCEEEEecC-CCCCCCcEEEEEeCCCceeeEEEEE-EeCCeEEEEEccCCCCCccCCCEEEEcCCeeeEeC
Q 015796 20 EYRTVTGVAGPLVILDKV-KGPKYYEIVNIRLGDGTMRRGQVLE-VDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPV 97 (400)
Q Consensus 20 ~~G~V~~I~G~lv~v~gl-~~~~iGEl~~v~~~~g~~~~geVi~-~~~~~~~l~~~~~~~Gl~~~g~~V~~tg~~~~Vpv 97 (400)
.+|+|++|.|++|++++. ..+.+++.|+|.. ++..+.+||++ ++++.+.+++|++++||+ .|++|.+||++++|||
T Consensus 13 ~~G~v~~v~G~vv~v~~~~~~~~i~~~~~i~~-~~~~~~~eV~~~~~~~~v~~~~~~~t~Gl~-~G~~V~~tg~~~~vpv 90 (482)
T 2ck3_D 13 TTGRIVAVIGAVVDVQFDEGLPPILNALEVQG-RETRLVLEVAQHLGESTVRTIAMDGTEGLV-RGQKVLDSGAPIRIPV 90 (482)
T ss_dssp CEEEEEEEETTEEEEEESSCCCCTTCEEEESS-CSSCCEEEEEEEEETTEEEEEESSCCTTCB-TTCEEEECSSSCEEEC
T ss_pred cceEEEEEEccEEEEEecCccCcccceEEEee-CCCcEEEEEeEEecCCeEEEEeccCccCCC-CCCEEEEcCCcceeec
Confidence 469999999999999985 5689999999853 23456899999 888889999999999998 5999999999999999
Q ss_pred CcCCcceEEcCCCCccCCCCCCCCCceecccCCCCCCCccCCcccccccceeeeeeeeeeccCceeeeecCCCCChhhhH
Q 015796 98 SLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 177 (400)
Q Consensus 98 g~~lLGrV~D~lG~Pld~~~~~~~~~~~~i~~~~~~~~~R~~~~~~l~TGiraID~l~pigkGqr~~I~g~~G~GKt~L~ 177 (400)
|++|||||+|++|+|||+.+++....+||++..||++++|.++++||+||||+||+|+|||||||++|||++|+|||+|+
T Consensus 91 G~~lLGRV~d~lG~PiDg~~~~~~~~~~pi~~~~P~~~~r~~~~e~l~TGir~ID~l~pigkGQr~~Ifgg~G~GKT~L~ 170 (482)
T 2ck3_D 91 GPETLGRIMNVIGEPIDERGPIKTKQFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLI 170 (482)
T ss_dssp SGGGBTCEECTTSCBCSSSCSCCCCCEEESCCCCCCGGGCCCCCCEECCSCHHHHHHSCEETTCEEEEEECTTSSHHHHH
T ss_pred cccccCCEEcccCcCcCCcCCCCccccccccccCCchHHhcccCcCCccceEEEecccccccCCeeeeecCCCCChHHHH
Confidence 99999999999999999998888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccchhhcccccccccCCCCCeEEEEEEeccchHHHHHHHHHhhhcCCCc------cEEEEEeCCCCCHHHHHh
Q 015796 178 AQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSME------RVTLFLNLANDPTIERII 251 (400)
Q Consensus 178 ~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer~e~~~~~~~~l~~~g~l~------~t~vv~~t~~~~~~~r~~ 251 (400)
+||+++..+ + ...+|||++||||.+|+.+|++++.+.++++ ||++|++|+|+||.+|++
T Consensus 171 ~~i~~~~~~------~---------~~~v~V~~~iGER~rEv~e~~~~~~~~~~l~~~~~~~rtvvV~~t~d~p~~~r~~ 235 (482)
T 2ck3_D 171 MELINNVAK------A---------HGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARAR 235 (482)
T ss_dssp HHHHHHTTT------T---------CSSEEEEEEESCCHHHHHHHHHHHHHHTSSCSSSSCCCEEEEEECTTSCHHHHHH
T ss_pred HHHHHhhHh------h---------CCCEEEEEECCCcchHHHHHHHHhhhccccccccCCceEEEEEECCCCCHHHHHH
Confidence 999887431 1 1138999999999999999999999999898 999999999999999999
Q ss_pred HHHHHHHHHHHhhhhCCCeEEEEEcchhhHHHHHHHHHHhcCCCCCCCCCCCchhhhHHHHHHhccCCCCCCCceeEEee
Q 015796 252 TPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPI 331 (400)
Q Consensus 252 a~~~a~tiAEyfr~d~G~~Vlli~Dsltr~a~A~reisl~lg~~p~~~gyp~~~~~~l~~l~ERag~~~~~~GSiT~i~~ 331 (400)
++|+|+|+|||||+++|+|||+++||+||||+|+||||+++||||+++||||++|++|++|||||++ .++||||+|++
T Consensus 236 ~~~~a~tiAEyfrd~~G~dVLll~DsitR~A~A~rEis~~lge~P~~~GYpp~l~~~l~~l~ERag~--~~~GSIT~i~t 313 (482)
T 2ck3_D 236 VALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITT--TKKGSITSVQA 313 (482)
T ss_dssp HHHHHHHHHHHHHHTTCSCEEEEEECTHHHHHHHHHHHGGGTCCCCGGGCCTTHHHHHHHHHTTSSC--CSSCCEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCcEEEEeccHHHHHHHHHHhhhhcCCCCccccCchhHHHHhHHHHHhhcC--CCCCceeeeEE
Confidence 9999999999999449999999999999999999999999999999999999999999999999996 46899999999
Q ss_pred EeecCCCCCCCcccccccccCeEEEecHhhhhcCCCCCcccCCCccccCccccCCCCCchhHHHhhhcC
Q 015796 332 LTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQV 400 (400)
Q Consensus 332 v~~~~~d~~dpi~~~~~~i~dg~i~L~r~la~~g~~PaID~l~S~SR~~~~~~~~~~~~~~h~~~~~~~ 400 (400)
|++|+||++|||||++++|+||||+|||+||++||||||||+.|+||+|+..+ +.++|.++|+++
T Consensus 314 v~v~~dD~tdPi~d~~~~i~dG~ivLsr~La~~giyPAIDvl~S~SR~~~~~i----~~~~~~~~a~~l 378 (482)
T 2ck3_D 314 IYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNI----VGSEHYDVARGV 378 (482)
T ss_dssp EECGGGCTTSHHHHHHGGGCSEEEEBCHHHHTTTCSSCBCTTSCEETTCSHHH----HCHHHHHHHHHH
T ss_pred EEecCCCCCCccHHHHHHhcCeEEEEcHHHHhCCCCCccCcccccccCCCccc----CCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999996533 458999998764
No 11
>3vr4_A V-type sodium ATPase catalytic subunit A; V-ATPase, rotary motor, P-loop, hydrolas ATPase, ATP binding; HET: MSE B3P; 2.17A {Enterococcus hirae} PDB: 3vr3_A* 3vr2_A* 3vr5_A 3vr6_A*
Probab=100.00 E-value=5.4e-98 Score=776.22 Aligned_cols=356 Identities=27% Similarity=0.415 Sum_probs=323.6
Q ss_pred eeEEEEEECCEEEEecCCCCCCCcEEEEEeCCCceeeEEEEEEeCCeEEEEEccCCCCCccCCCEEEEcCCeeeEeCCcC
Q 015796 21 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLD 100 (400)
Q Consensus 21 ~G~V~~I~G~lv~v~gl~~~~iGEl~~v~~~~g~~~~geVi~~~~~~~~l~~~~~~~Gl~~~g~~V~~tg~~~~Vpvg~~ 100 (400)
.|+|++|.|++++++|+.++++||+|+|. + ..+.|||++++++.+.+|+|++++||++ |++|.+||++++||||++
T Consensus 10 ~G~V~~V~G~vv~v~g~~~~~~gE~v~v~--~-~~l~gEVi~~~~d~a~i~v~e~t~Gl~~-G~~V~~tG~~lsV~vG~~ 85 (600)
T 3vr4_A 10 IGKIIKVSGPLVMAENMSEASIQDMCLVG--D-LGVIGEIIEMRQDVASIQVYEETSGIGP-GEPVRSTGEALSVELGPG 85 (600)
T ss_dssp CEEEEEEETTEEEEESCTTSCTTCEEEET--T-TTEEEEEEEEETTEEEEEESSCCTTCCT-TCEEEECSSSSEEEESTT
T ss_pred ceEEEEEECcEEEEEcCCCCccCCEEEEC--C-CcEEEEEEEEcCCcEEEEEccCCCCCCC-CCEEEECCCCCEEEeCHH
Confidence 69999999999999999989999999993 2 3478999999999999999999999996 899999999999999999
Q ss_pred CcceEEcCCCCccCCC----C-----------CCCCCc------------------------------------------
Q 015796 101 MLGRIFNGSGKPIDNG----P-----------PILPEA------------------------------------------ 123 (400)
Q Consensus 101 lLGrV~D~lG~Pld~~----~-----------~~~~~~------------------------------------------ 123 (400)
|||||+|++|||||+. + ++....
T Consensus 86 lLGrV~DglGrPlD~~~~~~g~~~~~~g~~~~~l~~~~~w~f~p~~~~Gd~v~~g~i~g~v~e~~~i~h~im~pp~~~g~ 165 (600)
T 3vr4_A 86 IISQMFDGIQRPLDTFMEVTQSNFLGRGVQLPALDHEKQWWFEATIEEGTEVSAGDIIGYVDETKIIQHKIMVPNGIKGT 165 (600)
T ss_dssp CTTCEECTTCCBHHHHHHHHCSSBCCTTCCCCSSCSSCCEEEEECSCTTCEECTTCEEEEEECSSSCEEEEECCTTCCEE
T ss_pred HHhhhhCcCCCcccccccccCccccccCCcCCCCCcccccccCcccccCCEecCCceEEEEecCCceeeeeecCCCCCce
Confidence 9999999999999976 3 121111
Q ss_pred -------------------------------eecccCCCCCCCccCCcccccccceeeeeeeeeeccCceeeeecCCCCC
Q 015796 124 -------------------------------YLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLP 172 (400)
Q Consensus 124 -------------------------------~~~i~~~~~~~~~R~~~~~~l~TGiraID~l~pigkGqr~~I~g~~G~G 172 (400)
+||++. |++.++|.++++||+||||+||+|+||+||||++|||++|+|
T Consensus 166 v~~i~~g~~~v~~~v~~i~~~~g~~~i~~~~~wpv~~-~~p~~~R~~~~epl~TGirvID~l~PigrGqr~~Ifgg~g~G 244 (600)
T 3vr4_A 166 VQKIESGSFTIDDPICVIETEQGLKELTMMQKWPVRR-GRPIKQKLNPDVPMITGQRVIDTFFPVTKGGAAAVPGPFGAG 244 (600)
T ss_dssp EEEECCEEECTTSCCEEEEETTEEEEECSCEEEETTS-CCCCSEEECCCSBCCCCCHHHHHHSCCBTTCEEEEECCTTSC
T ss_pred EEEecCCcceeceeEEEEeccCCcccccccccccccC-CCchhhccCCCceecccchhhhccCCccCCCEEeeecCCCcc
Confidence 233332 445668999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccchHHHHHHHHHhhh-------cCCCccEEEEEeCCCCC
Q 015796 173 HNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEE-------NGSMERVTLFLNLANDP 245 (400)
Q Consensus 173 Kt~L~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer~e~~~~~~~~l~~-------~g~l~~t~vv~~t~~~~ 245 (400)
||+|+++|++|+. +| +|||++||||.+++.+|+++|++ .++|+||++|++|+|+|
T Consensus 245 KT~L~~~ia~~~~-------~~-----------v~V~~~iGER~~Ev~e~~~~~~el~d~~~G~~~m~rtvvV~~tsd~p 306 (600)
T 3vr4_A 245 KTVVQHQIAKWSD-------VD-----------LVVYVGCGERGNEMTDVVNEFPELIDPNTGESLMERTVLIANTSNMP 306 (600)
T ss_dssp HHHHHHHHHHHSS-------CS-----------EEEEEEEEECHHHHHHHHHHTTTCBCTTTCSBGGGGEEEEEEETTSC
T ss_pred HHHHHHHHHhccC-------CC-----------EEEEEEecccHHHHHHHHHHHHhhcccccccccccceEEEEECCCCC
Confidence 9999999999865 44 99999999998888888899865 56899999999999999
Q ss_pred HHHHHhHHHHHHHHHHHhhhhCCCeEEEEEcchhhHHHHHHHHHHhcCCCCCCCCCCCchhhhHHHHHHhccCCC-----
Q 015796 246 TIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIE----- 320 (400)
Q Consensus 246 ~~~r~~a~~~a~tiAEyfr~d~G~~Vlli~Dsltr~a~A~reisl~lg~~p~~~gyp~~~~~~l~~l~ERag~~~----- 320 (400)
|++|++++|+|+|+||||| |+|+|||+++||+||||+|+||||+++||||+++|||+|+|++|++||||||++.
T Consensus 307 ~~~R~~~~~~altiAEyfr-d~G~dVLl~~Ds~tR~A~A~rEiS~~lge~P~~~GYp~~l~s~L~~l~ERAg~~~~~~~~ 385 (600)
T 3vr4_A 307 VAAREASIYTGITIAEYFR-DMGYDVAIMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGSRLAEYYERSGRVIALGSD 385 (600)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECHHHHHHHHHHHHHHTTCCBCGGGCBTTHHHHHHHHHTTSEEEECSSTT
T ss_pred HHHHHHHHHHHHHHHHHHH-HcCCCEEEEecchHHHHHHHHHHHhccCCCCccccCCchhhhHHHHHHHhhccccccCCC
Confidence 9999999999999999999 8999999999999999999999999999999999999999999999999999864
Q ss_pred CCCCceeEEeeEeecCCCCCCCcccccccccCeEEEecHhhhhcCCCCCcccCCCccccCcccc--CCCCCchhHHHhhh
Q 015796 321 GRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAI--GEGMTRRDHSDVSN 398 (400)
Q Consensus 321 ~~~GSiT~i~~v~~~~~d~~dpi~~~~~~i~dg~i~L~r~la~~g~~PaID~l~S~SR~~~~~~--~~~~~~~~h~~~~~ 398 (400)
+++||||+|++|++|+||++||||+++++|+||||+|||+||++||||||||+.|+||+|+.+. -.+.++++|.++|+
T Consensus 386 ~~~GSIT~i~~v~~~gdD~tdPi~~~t~~i~dg~ivLsr~La~~giyPAId~l~S~SR~~~~l~~~~~~~~~~~h~~~a~ 465 (600)
T 3vr4_A 386 QREGSITAISAVSPSGGDISEPVTQNTLRVVKVFWGLDSSLAQKRHFPSINWIQSYSLYSTEVGRYMDQILQQDWSDMVT 465 (600)
T ss_dssp CCEEEEEEEEEECCSSSCTTSHHHHHHHTTCCEECCBCHHHHTTTCSSCBCTTTCEETTHHHHHHHHHHHHTSCHHHHHH
T ss_pred CCCcceEEEEEEECCCCCCCCcchhhhhhhccEEEEEhhhHHhCCCCCccCcccchhhhcccccccccccCCHHHHHHHH
Confidence 4689999999999999999999999999999999999999999999999999999999999642 12356789999988
Q ss_pred cC
Q 015796 399 QV 400 (400)
Q Consensus 399 ~~ 400 (400)
++
T Consensus 466 ~~ 467 (600)
T 3vr4_A 466 EG 467 (600)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 12
>3gqb_A V-type ATP synthase alpha chain; A3B3, V-ATPase, ATP synthesis, ATP-binding, hydrogen ION TRA hydrolase, ION transport; 2.80A {Thermus thermophilus HB8} PDB: 3a5c_A* 3a5d_A 3j0j_A* 1um2_C
Probab=100.00 E-value=5.5e-98 Score=773.44 Aligned_cols=356 Identities=26% Similarity=0.401 Sum_probs=323.7
Q ss_pred eeEEEEEECCEEEEecCCCCCCCcEEEEEeCCCceeeEEEEEEeCCeEEEEEccCCCCCccCCCEEEEcCCeeeEeCCcC
Q 015796 21 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLD 100 (400)
Q Consensus 21 ~G~V~~I~G~lv~v~gl~~~~iGEl~~v~~~~g~~~~geVi~~~~~~~~l~~~~~~~Gl~~~g~~V~~tg~~~~Vpvg~~ 100 (400)
.|+|++|+|++++++|+.++++||+|+|. + ..+.|||++++++.+.+|+|++++||++ |++|.+||++++||||++
T Consensus 3 ~G~V~~V~G~vv~v~g~~~~~~gE~v~v~--~-~~l~gEVi~~~~d~~~i~v~e~t~Gl~~-G~~V~~tg~~l~V~vG~~ 78 (578)
T 3gqb_A 3 QGVIQKIAGPAVIAKGMLGARMYDISKVG--E-EGLVGEIIRLDGDTAFVQVYEDTSGLKV-GEPVVSTGLPLAVELGPG 78 (578)
T ss_dssp EEEEEEEETTEEEEESCTTCCTTEEEEET--T-TTEEEEEEEEETTEEEEEESSCCTTCCT-TCEEEEEEEESEEEESTT
T ss_pred eeEEEEEECCEEEEEcCCCCccCCEEEEC--C-CcEEEEEEEEcCCcEEEEEcCCCCCCCC-CCEEEECCCCCEEEeCHH
Confidence 69999999999999999989999999993 2 3478999999999999999999999996 899999999999999999
Q ss_pred CcceEEcCCCCccCCC----CC----------CCCC--------------------------------------------
Q 015796 101 MLGRIFNGSGKPIDNG----PP----------ILPE-------------------------------------------- 122 (400)
Q Consensus 101 lLGrV~D~lG~Pld~~----~~----------~~~~-------------------------------------------- 122 (400)
|||||+|++|||||+. ++ +...
T Consensus 79 lLGrV~DglG~PlD~~~~~~g~~~~~g~~~~~l~~~~~w~f~p~~~~g~~v~~G~i~g~v~e~~~ih~i~~pp~~~g~v~ 158 (578)
T 3gqb_A 79 MLNGIYDGIQRPLERIREKTGIYITRGVVVHALDREKKWAWTPMVKPGDEVRGGMVLGTVPEFGFTHKILVPPDVRGRVK 158 (578)
T ss_dssp CTTCEECTTSCBHHHHHHHHCSBCCTTCCCCSSCSSSCEEEEECCCTTCEECTTCEEEEEEETTEEEEEECCTTCCEEEE
T ss_pred HhhhhhCcCCCcccccccccCccccccccCCCcCcccccccccccccCccccccceeeeecccccceecccCCCcCceeE
Confidence 9999999999999986 21 1111
Q ss_pred --------------------------ceecccCCCCCCCccCCcccccccceeeeeeeeeeccCceeeeecCCCCChhhh
Q 015796 123 --------------------------AYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEI 176 (400)
Q Consensus 123 --------------------------~~~~i~~~~~~~~~R~~~~~~l~TGiraID~l~pigkGqr~~I~g~~G~GKt~L 176 (400)
++||++. |+++++|.++++||+||||+||+|+||+||||++|||++|+|||+|
T Consensus 159 ~i~~~G~~~v~~~i~~~~~g~~i~~~~~wPv~~-~~p~~~R~~~~epl~TGirvID~l~PigrGqr~~Ifg~~g~GKT~l 237 (578)
T 3gqb_A 159 EVKPAGEYTVEEPVVVLEDGTELKMYHTWPVRR-ARPVQRKLDPNTPFLTGMRILDVLFPVAMGGTAAIPGPFGSGKSVT 237 (578)
T ss_dssp EECCSEEECTTSCSEEETTCCEECSCEEEETTS-CCCCSEEECSCSEECCSCHHHHTTSCEETTCEEEECCCTTSCHHHH
T ss_pred EeccCCcccccceeEEeecCccccccccccccC-CCChHHhccCCCcccccchhhhhcccccCCCEEeeeCCCCccHHHH
Confidence 1233332 2456689999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccchHHHHHHHHHhhh-------cCCCccEEEEEeCCCCCHHHH
Q 015796 177 AAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEE-------NGSMERVTLFLNLANDPTIER 249 (400)
Q Consensus 177 ~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer~e~~~~~~~~l~~-------~g~l~~t~vv~~t~~~~~~~r 249 (400)
+++|++|+. +| +|||++||||.+++.+|+++|++ .++|+||++|++|+|+||++|
T Consensus 238 ~~~ia~~~~-------~~-----------v~V~~~iGER~~Ev~e~~~~~~el~d~~~G~~~~~rtvvv~~tsd~p~~~R 299 (578)
T 3gqb_A 238 QQSLAKWSN-------AD-----------VVVYVGSGERGNEMTDVLVEFPELTDPKTGGPLMHRTVLIANTSNMPVAAR 299 (578)
T ss_dssp HHHHHHHSS-------CS-----------EEEEEEEEECHHHHHHHHTTGGGCBCTTTSSBSGGGEEEEEEETTSCHHHH
T ss_pred HHHHHhccC-------CC-----------EEEEEEecccHHHHHHHHHHHHhhcccccccccccceEEEEECCCCCHHHH
Confidence 999999865 44 99999999998888888889875 568999999999999999999
Q ss_pred HhHHHHHHHHHHHhhhhCCCeEEEEEcchhhHHHHHHHHHHhcCCCCCCCCCCCchhhhHHHHHHhccCCC---CCCCce
Q 015796 250 IITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIE---GRKGSI 326 (400)
Q Consensus 250 ~~a~~~a~tiAEyfr~d~G~~Vlli~Dsltr~a~A~reisl~lg~~p~~~gyp~~~~~~l~~l~ERag~~~---~~~GSi 326 (400)
++++|+|+|+||||| |+|+|||+++||+||||+|+||||+++||||+++|||+++|++|++||||||+++ +++|||
T Consensus 300 ~~~~~~altiAEyfr-d~G~dVLl~~Ds~tR~A~A~rEis~~lge~P~~~GYp~~l~s~l~~l~ERAg~~~~~~~~~GSI 378 (578)
T 3gqb_A 300 EASIYVGVTIAEYFR-DQGFSVALMADSTSRWAEALREISSRLEEMPAEEGYPPYLAARLAAFYERAGKVITLGGEEGAV 378 (578)
T ss_dssp HHHHHHHHHHHHHHH-HTTCEEEECCSCHHHHHHHHHHHHHHTTCCCCSSSSCTTHHHHHHHHHTTCEEEECTTSCEEEE
T ss_pred HHHHHHHHHHHHHHH-HcCCCEEEEecChHHHHHHHHHHHHhccCCCccccCCchhhhHHHHHHHhhcCcccCCCCCcce
Confidence 999999999999999 8999999999999999999999999999999999999999999999999999874 468999
Q ss_pred eEEeeEeecCCCCCCCcccccccccCeEEEecHhhhhcCCCCCcccCCCccccCcccc--CCCCCchhHHHhhhcC
Q 015796 327 TQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAI--GEGMTRRDHSDVSNQV 400 (400)
Q Consensus 327 T~i~~v~~~~~d~~dpi~~~~~~i~dg~i~L~r~la~~g~~PaID~l~S~SR~~~~~~--~~~~~~~~h~~~~~~~ 400 (400)
|++++|++|+||++||||+++++|+||||+|||+||++||||||||+.|+||+|+.+. -.+.++++|.++|+++
T Consensus 379 T~i~~v~~~gdD~tdPi~~~t~~i~dg~ivLsr~La~~g~yPAId~l~S~SR~~~~v~~~~~~~~~~~h~~~a~~~ 454 (578)
T 3gqb_A 379 TIVGAVSPPGGDMSEPVTQSTLRIVGAFWRLDASLAFRRHFPAINWNGSYSLFTSALDPWYRENVAEDYPELRDAI 454 (578)
T ss_dssp EEEEECCCTTTCTTSHHHHHHHTTCSEECCBCHHHHHHTCSSCBCTTTCEESSHHHHHHHHHHHTCTTHHHHHHHH
T ss_pred EEEEEEEcCCCCCCCcchHHHhhhcCceEEECHHHHhCCCCCCcCcccchhhccccccccccccCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999643 1235789999999863
No 13
>3mfy_A V-type ATP synthase alpha chain; A-type ATP synthase, P loop, phenylalanine mutant, hydrolase; 2.35A {Pyrococcus horikoshii} PDB: 3i4l_A* 3i72_A 3i73_A* 3p20_A 3ikj_A 3qg1_A 3nd8_A 3nd9_A 1vdz_A 3qia_A 3qjy_A 3m4y_A 3se0_A 3sdz_A
Probab=100.00 E-value=9.4e-99 Score=779.27 Aligned_cols=357 Identities=27% Similarity=0.413 Sum_probs=255.5
Q ss_pred eeeEEEEEECCEEEEecCCCCCCCcEEEEEeCCCceeeEEEEEEeCCeEEEEEccCCCCCccCCCEEEEcCCeeeEeCCc
Q 015796 20 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSL 99 (400)
Q Consensus 20 ~~G~V~~I~G~lv~v~gl~~~~iGEl~~v~~~~g~~~~geVi~~~~~~~~l~~~~~~~Gl~~~g~~V~~tg~~~~Vpvg~ 99 (400)
..|+|++|+|++++++|++++++||+|+|.. ..+.|||++++++.+.+|+|++++||++ |++|.+||++++|+||+
T Consensus 3 ~~G~V~~V~G~iv~~~g~~~~~~gElv~v~~---~~l~geVi~l~~d~~~i~v~e~t~Gi~~-G~~V~~tg~~lsV~vG~ 78 (588)
T 3mfy_A 3 AKGRIIRVTGPLVVADGMKGAKMYEVVRVGE---LGLIGEIIRLEGDKAVIQVYEETAGVRP-GEPVVGTGASLSVELGP 78 (588)
T ss_dssp -------------------------------------------------------------C-CCCCSSSSSCCEEEEST
T ss_pred ceeEEEEEECCEEEEEcCCCCccCCEEEEcC---CceEEEEEEecCCeEEEEEccCCCCCCC-CCEEEEcCCCCEEEeCH
Confidence 4699999999999999999899999999942 3478999999999999999999999996 89999999999999999
Q ss_pred CCcceEEcCCCCccCCCCCCCC--------------C-------------------------------------------
Q 015796 100 DMLGRIFNGSGKPIDNGPPILP--------------E------------------------------------------- 122 (400)
Q Consensus 100 ~lLGrV~D~lG~Pld~~~~~~~--------------~------------------------------------------- 122 (400)
+|||||+|++|||||+.++... .
T Consensus 79 gLLGrV~DglgrPLd~~~~~~g~~~~~g~~~~~l~~~~~w~f~p~~~~gd~v~~G~i~g~v~e~~~~~~~imvpp~~~g~ 158 (588)
T 3mfy_A 79 RLLTSIYDGIQRPLEVIREKTGDFIARGVTAPALPRDKKWHFIPKAKVGDKVVGGDIIGEVPETSIIVHKIMVPPGIEGE 158 (588)
T ss_dssp TCTTCEEETTCCSSSSCCCCCSSSCCCCCCCCSSCSSCCEEEEECCCTTCEECTTCEEEEEECSSSCEEEEECCTTCCEE
T ss_pred HHHhhccCCCCCcccCcccccccccccccccCccccccccccccccccCcccccCceEEEEecccceeeeeecCCCCCce
Confidence 9999999999999999753210 0
Q ss_pred --------------------------------ceecccCCCCCCCccCCcccccccceeeeeeeeeeccCceeeeecCCC
Q 015796 123 --------------------------------AYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAG 170 (400)
Q Consensus 123 --------------------------------~~~~i~~~~~~~~~R~~~~~~l~TGiraID~l~pigkGqr~~I~g~~G 170 (400)
++||++. |+++++|.++++||+||||+||+|+|||||||++|||++|
T Consensus 159 v~~i~~~g~~~v~~~i~~i~~~~g~~~~i~~~~~wpv~~-~~p~~~R~~~~epl~TGirvID~l~PigkGqr~~I~g~~g 237 (588)
T 3mfy_A 159 IVEIAEEGDYTIEEVIAKVKTPSGEIKELKMYQRWPVRV-KRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPAG 237 (588)
T ss_dssp EEEECCSEEECTTSEEEEEECTTCCEEEEESCEEEETTS-CCCCSEEECSCSEECCSCHHHHHHSCEETTCEEEECSCCS
T ss_pred EEEeccCCcccccceEEEEecCCCccccccccccccccC-CCchhhhccCCcccccCcchhhccCCcccCCeEEeecCCC
Confidence 1233332 3455789999999999999999999999999999999999
Q ss_pred CChhhhHHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccchHHHHHHHHHhhh-------cCCCccEEEEEeCCC
Q 015796 171 LPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEE-------NGSMERVTLFLNLAN 243 (400)
Q Consensus 171 ~GKt~L~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer~e~~~~~~~~l~~-------~g~l~~t~vv~~t~~ 243 (400)
+|||+|+++|++|+. +| +|||++||||.+++.+|+++|++ .++|+||++|++|+|
T Consensus 238 ~GKT~L~~~ia~~~~-------~~-----------~~V~~~iGER~~Ev~e~~~~~~el~d~~~g~~~m~rtvvV~~tsd 299 (588)
T 3mfy_A 238 SGKTVTQHQLAKWSD-------AQ-----------VVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSN 299 (588)
T ss_dssp HHHHHHHHHHHHHSS-------CS-----------EEEEEECCSSSSHHHHHHHHTTTCEETTTTEEGGGGEEEEECCTT
T ss_pred CCHHHHHHHHHhccC-------CC-----------EEEEEEecccHHHHHHHHHHHHHhcccccccccccceEEEEECCC
Confidence 999999999999864 44 99999999999888888899865 568999999999999
Q ss_pred CCHHHHHhHHHHHHHHHHHhhhhCCCeEEEEEcchhhHHHHHHHHHHhcCCCCCCCCCCCchhhhHHHHHHhccCCC---
Q 015796 244 DPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIE--- 320 (400)
Q Consensus 244 ~~~~~r~~a~~~a~tiAEyfr~d~G~~Vlli~Dsltr~a~A~reisl~lg~~p~~~gyp~~~~~~l~~l~ERag~~~--- 320 (400)
+||++|++++|+|+|+||||| |+|+|||+++||+||||+|+||||+++||||+++|||+++|++|++||||||++.
T Consensus 300 ~p~~~r~~~~~~a~tiAEyfr-d~G~dVLl~~DsltR~A~A~rEis~~lge~P~~~GYp~~l~s~L~~l~ERAg~~~~~~ 378 (588)
T 3mfy_A 300 MPVAAREASIYTGITIAEYFR-DMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGRVVTLG 378 (588)
T ss_dssp SCHHHHHHHHHHHHHHHHHHH-HTTCEEEEEEECTTTCCCCC----------------CCHHHHHHHHHHTTCEEEECSS
T ss_pred CCHHHHHHHHHHHHHHHHHHH-HcCCCEEEeecchHHHHHHHHHHHHhccCCCccccCCchhhhhhhHHHhccccccccC
Confidence 999999999999999999999 8999999999999999999999999999999999999999999999999999874
Q ss_pred --CCCCceeEEeeEeecCCCCCCCcccccccccCeEEEecHhhhhcCCCCCcccCCCccccCcccc--CCCCCchhHHHh
Q 015796 321 --GRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAI--GEGMTRRDHSDV 396 (400)
Q Consensus 321 --~~~GSiT~i~~v~~~~~d~~dpi~~~~~~i~dg~i~L~r~la~~g~~PaID~l~S~SR~~~~~~--~~~~~~~~h~~~ 396 (400)
+++||||+|++|++|+||++||||+++++|+||||+|||+||++||||||||+.|+||+|+.+. -.+.++++|.++
T Consensus 379 ~~~~~GSIT~i~~v~~~gdD~sdpi~~~~~~i~dg~i~Lsr~La~~g~yPAId~l~S~SR~~~~i~~~~~~~~~~~h~~~ 458 (588)
T 3mfy_A 379 SDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNIDPEWKAM 458 (588)
T ss_dssp SSCCEEEEEEEEECCCTTSCSSCSHHHHHHHHCSEECCBCHHHHHTTCSSCBCTTTCEETTHHHHHHHHHHHTCTTHHHH
T ss_pred CCCCCcceEEEEEEECCCCCCCCcchHHHHHhccCeeecCHHHHhCCCCCCcCcccchhhhcccccchhhccCCHHHHHH
Confidence 3589999999999999999999999999999999999999999999999999999999999742 123578999999
Q ss_pred hhcC
Q 015796 397 SNQV 400 (400)
Q Consensus 397 ~~~~ 400 (400)
|+++
T Consensus 459 a~~~ 462 (588)
T 3mfy_A 459 RDKA 462 (588)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9863
No 14
>1sky_E F1-ATPase, F1-ATP synthase; F1FO ATP synthase, alpha3BETA3 SUBC F1-ATPase, hydrolase; 3.20A {Bacillus SP} SCOP: a.69.1.1 b.49.1.1 c.37.1.11
Probab=100.00 E-value=1.4e-92 Score=727.87 Aligned_cols=359 Identities=26% Similarity=0.372 Sum_probs=333.5
Q ss_pred eeeEEEEEECCEEEEecC--CCCCCCcEEEEEeCC--Cc----eeeEEEEE-EeCCeEEEEEccCCCCCccCCCEEEEcC
Q 015796 20 EYRTVTGVAGPLVILDKV--KGPKYYEIVNIRLGD--GT----MRRGQVLE-VDGEKAVVQVFEGTSGIDNKFTTVQFTG 90 (400)
Q Consensus 20 ~~G~V~~I~G~lv~v~gl--~~~~iGEl~~v~~~~--g~----~~~geVi~-~~~~~~~l~~~~~~~Gl~~~g~~V~~tg 90 (400)
.+|+|++|.|++|+++++ ..+.+||+|+|...+ +. ...+||++ ++++.+.+++|+++.||+ .|++|.+||
T Consensus 2 ~~G~v~~v~G~vv~~~~~~~~~~~i~~~~~i~~~~~~~~~~~~~~~~ev~~~~~~~~v~~~~~~~t~gl~-~G~~V~~tg 80 (473)
T 1sky_E 2 TRGRVIQVMGPVVDVKFENGHLPAIYNALKIQHKARNENEVDIDLTLEVALHLGDDTVRTIAMASTDGLI-RGMEVIDTG 80 (473)
T ss_dssp CEEEEEEEETTEEEEEESTTCCCCTTEEEEEEECCSSTTCCCEEEEEEEEEEEETTEEEEEESSCCTTCC-TTCEEEEEE
T ss_pred CceEEEEEECcEEEEEecCCcccccCCEEEEEecCCCCCccccceEEEEeEEecCCcEEEEEecCccCCC-CCCEEEEcC
Confidence 369999999999999998 358999999997533 33 47899998 899999999999999998 599999999
Q ss_pred CeeeEeCCcCCcceEEcCCCCccCCCCCCCCC-ceecccCCCCCCCccCCcccccccceeeeeeeeeeccCceeeeecCC
Q 015796 91 EVLKTPVSLDMLGRIFNGSGKPIDNGPPILPE-AYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAA 169 (400)
Q Consensus 91 ~~~~Vpvg~~lLGrV~D~lG~Pld~~~~~~~~-~~~~i~~~~~~~~~R~~~~~~l~TGiraID~l~pigkGqr~~I~g~~ 169 (400)
++++||||++|||||+|++|+|||+.+++... .+||++..||++++|.++++||+||||+||.|+|++||||++|||++
T Consensus 81 ~~~~vpvg~~llGrv~d~lG~piD~~g~i~~~~~~~pi~~~~p~~~~r~~~~e~l~TGir~ID~L~pi~kGq~~~i~G~s 160 (473)
T 1sky_E 81 APISVPVGQVTLGRVFNVLGEPIDLEGDIPADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPYIKGGKIGLFGGA 160 (473)
T ss_dssp EECEEECSGGGTTCEECTTSCBCSSSCCCCTTSCEEESCCCCCCGGGBCCSCCEECCSCHHHHHHSCEETTCEEEEECCS
T ss_pred CcceeeccccceeeEEeecCCccCcccccCCCceeecccccCcchhhhcccCccccccchHHHHHhhhccCCEEEEECCC
Confidence 99999999999999999999999999888777 78999999999999999999999999999999999999999999999
Q ss_pred CCChhhhHHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccchHHHHHHHHHhhhcCCCccEEEEEeCCCCCHHHH
Q 015796 170 GLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIER 249 (400)
Q Consensus 170 G~GKt~L~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer~e~~~~~~~~l~~~g~l~~t~vv~~t~~~~~~~r 249 (400)
|+|||+|+.+|+.+.... ...+|||++||||++++.+|++++.+.++|+||++|++++++||++|
T Consensus 161 GvGKTtL~~~l~~~~~~~---------------~~~i~V~~~iGerttev~el~~~l~~~~~l~~tvvv~~~~~d~pg~r 225 (473)
T 1sky_E 161 GVGKTVLIQELIHNIAQE---------------HGGISVFAGVGERTREGNDLYHEMKDSGVISKTAMVFGQMNEPPGAR 225 (473)
T ss_dssp SSCHHHHHHHHHHHHHHH---------------TCCCEEEEEESSCHHHHHHHHHHHHHTSGGGGEEEEEECTTSCHHHH
T ss_pred CCCccHHHHHHHhhhhhc---------------cCcEEEEeeeccCchHHHHHHHHhhhcCCcceeEEEEEcCCCCHHHH
Confidence 999999999998775421 12388999999999999889999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHhhhhCCCeEEEEEcchhhHHHHHHHHHHhcCCCCCCCCCCCchhhhHHHHHHhccCCCCCCCceeEE
Q 015796 250 IITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQI 329 (400)
Q Consensus 250 ~~a~~~a~tiAEyfr~d~G~~Vlli~Dsltr~a~A~reisl~lg~~p~~~gyp~~~~~~l~~l~ERag~~~~~~GSiT~i 329 (400)
++++++++++|||||+++|+|||+++||+||||+|+||||+++||||+++||||++|++|++|||||++ .++||||+|
T Consensus 226 ~~~~~~~ltiAEyFrd~~G~~VLl~~D~itR~a~A~reis~~~ge~P~~~GYp~~~~~~l~~l~ERa~~--~~~GSIT~i 303 (473)
T 1sky_E 226 MRVALTGLTMAEYFRDEQGQDGLLFIDNIFRFTQAGSEVSALLGRMPSAIGYQPTLATEMGQLQERITS--TAKGSITSI 303 (473)
T ss_dssp HHHHHHHHHHHHHHHHHSCCEEEEEEECTHHHHHHHHHHHHHHTCCCCGGGCCTTHHHHHHHHHTTSSC--BSSCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEeccHHHHHHHHHHHHhhcCCCCccccCCchhhhHHHHHHHHhcC--CCCCceEEE
Confidence 999999999999999338999999999999999999999999999999999999999999999999997 358999999
Q ss_pred eeEeecCCCCCCCcccccccccCeEEEecHhhhhcCCCCCcccCCCccccCccccCCCCCchhHHHhhhcC
Q 015796 330 PILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQV 400 (400)
Q Consensus 330 ~~v~~~~~d~~dpi~~~~~~i~dg~i~L~r~la~~g~~PaID~l~S~SR~~~~~~~~~~~~~~h~~~~~~~ 400 (400)
++|++|+||++||||+++++|+||||+|||+||++||||||||+.|+||+|+..+ ++++|.++|+++
T Consensus 304 ~tv~~~~dD~~dpi~~~~~~i~dg~ivLsr~La~~g~yPAId~l~S~SR~~~~~~----~~~~~~~~a~~l 370 (473)
T 1sky_E 304 QAIYVPADDYTDPAPATTFSHLDATTNLERKLAEMGIYPAVDPLVSTSRALAPEI----VGEEHYQVARKV 370 (473)
T ss_dssp EECCCSTTCSSSHHHHHHHTTCSEEEEBCTTHHHHTCSSCBCTTTCCBTTCCHHH----HHHHHHHHHHHH
T ss_pred EEEEecCCCCCCcchHHHHhhcCceEEecHHHHhCCCCCccccccccccccchhc----CCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999997643 568999999864
No 15
>3l0o_A Transcription termination factor RHO; helicase, RHO factor, RNA capture mechanism, ATP-binding, hydrolase, nucleotide-binding, RN binding; 2.35A {Thermotoga maritima}
Probab=100.00 E-value=2.2e-73 Score=569.48 Aligned_cols=289 Identities=14% Similarity=0.131 Sum_probs=248.2
Q ss_pred CCCccCCCEEEEcCCeeeEeCCcCCcceEEcCCCCccCCCCCCCCCceecc-cCCCCCCCccCCcc-cccccceeeeeee
Q 015796 77 SGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDI-SGSSINPSERTYPE-EMIQTGISTIDVM 154 (400)
Q Consensus 77 ~Gl~~~g~~V~~tg~~~~Vpvg~~lLGrV~D~lG~Pld~~~~~~~~~~~~i-~~~~~~~~~R~~~~-~~l~TGiraID~l 154 (400)
-||+ .|+.|...-++.+-.=--.-|+||.+..|++.+.... .... ...|++|++|.+++ +++.||+|+||+|
T Consensus 96 ~~lr-~gd~v~g~~r~~~~~e~~~~l~~v~~vng~~p~~~~~-----r~~fe~l~Pi~P~~R~~le~e~~~tGiraID~l 169 (427)
T 3l0o_A 96 FNLN-TGDIISGVIRKPKEGEKYFAMIKIEAINYRPVEAVND-----RVNFDNLTPDYPRERFILETDPKIYSTRLIDLF 169 (427)
T ss_dssp TTCC-TTCEEEEEEECCCSSSCSEEEEEEEEETTEEC----C-----CCCGGGSCEECCCSBCCCCCSTTCHHHHHHHHH
T ss_pred cCCC-CCCEEEEEEeCCCCCcccccceEEEecCCCChHHhcc-----ccccccCCCCCchhhccccccchhccchhhhhc
Confidence 3555 3666665433332211123567898888887775321 1112 23567999999998 9999999999999
Q ss_pred eeeccCceeeeecCCCCChhhhHHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccchHHHHHHHHHhhhcCCCcc
Q 015796 155 NSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMER 234 (400)
Q Consensus 155 ~pigkGqr~~I~g~~G~GKt~L~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer~e~~~~~~~~l~~~g~l~~ 234 (400)
+|||||||++|||++|+|||+|+++|+++..+ . +.++.|||++||||.+++.+|++++. |
T Consensus 170 ~PigrGQR~lIfg~~g~GKT~Ll~~Ia~~i~~------~--------~~dv~~V~~lIGER~~EV~d~~~~~~--G---- 229 (427)
T 3l0o_A 170 APIGKGQRGMIVAPPKAGKTTILKEIANGIAE------N--------HPDTIRIILLIDERPEEVTDIRESTN--A---- 229 (427)
T ss_dssp SCCBTTCEEEEEECTTCCHHHHHHHHHHHHHH------H--------CTTSEEEEEECSCCHHHHSSSSSSCC--S----
T ss_pred ccccCCceEEEecCCCCChhHHHHHHHHHHhh------c--------CCCeEEEEEEeccCcchHHHHHHHhC--C----
Confidence 99999999999999999999999999998652 1 14568999999999999988877775 3
Q ss_pred EEEEEeCCCCCHHHHHhHHHHHHHHHHHhhhhCCCeEEEEEcchhhHHHHHHHHHHhcCCCCCCCCCCCchhhhHHHHHH
Q 015796 235 VTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYE 314 (400)
Q Consensus 235 t~vv~~t~~~~~~~r~~a~~~a~tiAEyfr~d~G~~Vlli~Dsltr~a~A~reisl~lg~~p~~~gyp~~~~~~l~~l~E 314 (400)
+||++|+|+||.+|++++++|+|+||||| |+|+|||+++||+||||+|+||||+++||+|+ +||||++|+.+++|+|
T Consensus 230 -~VV~atadep~~~r~~~a~~altiAEyfr-d~G~dVLil~DslTR~A~A~rEvs~~~Ge~~s-~Gypp~~~~~~~~~~e 306 (427)
T 3l0o_A 230 -IVIAAPFDMPPDKQVKVAELTLEMAKRLV-EFNYDVVILLDSLTRLARVYNIVVPPSGKLLT-GGVDPAALYKPKRFFG 306 (427)
T ss_dssp -EEEECCTTSCHHHHHHHHHHHHHHHHHHH-HTTCEEEEEEECHHHHHHHHHHHSCCCSCCCS-SSCCSSCSHHHHHHHH
T ss_pred -eEEEECCCCCHHHHHHHHHHHHHHHHHHH-HcCCCEEEecccchHHHHHHHHHHHhcCCCCC-CCcCchhhcchHHHHH
Confidence 89999999999999999999999999999 89999999999999999999999999999999 5999999999999999
Q ss_pred hccCCCCCCCceeEEeeEeec-CCCCCCCcccccccccCeEEEecHhhhhcCCCCCcccCCCccccCccccCCCCCchhH
Q 015796 315 RAGRIEGRKGSITQIPILTMP-NDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDH 393 (400)
Q Consensus 315 Rag~~~~~~GSiT~i~~v~~~-~~d~~dpi~~~~~~i~dg~i~L~r~la~~g~~PaID~l~S~SR~~~~~~~~~~~~~~h 393 (400)
||++++ ++||||+|++|+++ +||++|||+|++++|+||||+|||+||++||||||||+.|+||+|+.+++ ++|
T Consensus 307 rA~~ie-~~GSIT~i~tvlvetgdd~~dpI~d~~~~i~dg~IvLsR~La~~giyPAIDvl~S~SR~~~~l~~-----~~h 380 (427)
T 3l0o_A 307 AARNTR-EGGSLTIIATALVETGSKMDEVIFEEFKGTGNMELVLSRQLANKRIFPAINLLLSGTRREELLLD-----EET 380 (427)
T ss_dssp TCEEES-SSCEEEEEEEEECSSSCSHHHHHHHHTTTCCSEEEEBCHHHHTTTCSSCBCSTTCEETTGGGTSC-----HHH
T ss_pred hhcccC-CCcceeEEEEEEecCCCCcCCcchHHhcccCCceEEEeHHHHhCCCCCccCccccccccccccCC-----HHH
Confidence 999975 59999999999999 89999999999999999999999999999999999999999999999776 789
Q ss_pred HHhhhcC
Q 015796 394 SDVSNQV 400 (400)
Q Consensus 394 ~~~~~~~ 400 (400)
.++|++|
T Consensus 381 ~~~a~~l 387 (427)
T 3l0o_A 381 LKKVWLL 387 (427)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998753
No 16
>3ice_A Transcription termination factor RHO; transcription, ATPase, hexamer, helicase, RNA, RECA, OB fold ATP-binding, hydrolase; HET: MSE ADP SPD; 2.80A {Escherichia coli k-12} PDB: 1pv4_A 1pvo_A* 1xpo_A* 1xpr_A* 1xpu_A* 2ht1_A
Probab=100.00 E-value=1.6e-69 Score=542.58 Aligned_cols=241 Identities=14% Similarity=0.201 Sum_probs=223.5
Q ss_pred CCCCCccCCcc----cccccceeeeeeeeeeccCceeeeecCCCCChhhhHHHHHHHhccchhhcccccccccCCCCCeE
Q 015796 131 SINPSERTYPE----EMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFA 206 (400)
Q Consensus 131 ~~~~~~R~~~~----~~l~TGiraID~l~pigkGqr~~I~g~~G~GKt~L~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~ 206 (400)
|..|.+|..+. +|++||+|+||+++||++|||++|||++|+|||+|+++|+++... . +.++.
T Consensus 141 p~yP~er~~Le~~~~~~~~tGiraID~~~pi~rGQr~~IvG~sG~GKTtLl~~Iar~i~~------~--------~~~v~ 206 (422)
T 3ice_A 141 PLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAY------N--------HPDCV 206 (422)
T ss_dssp EESCCSBCCCCCTTCCTTHHHHHHHHHHSCCBTTCEEEEECCSSSSHHHHHHHHHHHHHH------H--------CTTSE
T ss_pred ccCCCCccccccCCCCcccccceeeeeeeeecCCcEEEEecCCCCChhHHHHHHHHHHhh------c--------CCCee
Confidence 44566777776 899999999999999999999999999999999999999988642 1 14568
Q ss_pred EEEEEeccchHHHHHHHHHhhhcCCCccEEEEEeCCCCCHHHHHhHHHHHHHHHHHhhhhCCCeEEEEEcchhhHHHHHH
Q 015796 207 IVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALR 286 (400)
Q Consensus 207 ~V~~~iGer~e~~~~~~~~l~~~g~l~~t~vv~~t~~~~~~~r~~a~~~a~tiAEyfr~d~G~~Vlli~Dsltr~a~A~r 286 (400)
|||++||||.+++.+|++++ +++||++|+|+||.+|++++++|+++||||| |+|+|||+++||+||||+|+|
T Consensus 207 ~I~~lIGER~~Ev~~~~~~~-------~~~vV~atadep~~~r~~~a~~alt~AEyfr-d~G~dVLil~DslTR~A~A~r 278 (422)
T 3ice_A 207 LMVLLIDERPEEVTEMQRLV-------KGEVVASTFDEPASRHVQVAEMVIEKAKRLV-EHKKDVIILLDSITRLARAYN 278 (422)
T ss_dssp EEEEEESSCHHHHHHHHTTC-------SSEEEEECTTSCHHHHHHHHHHHHHHHHHHH-HTSCEEEEEEECHHHHHHHHH
T ss_pred EEEEEecCChHHHHHHHHHh-------CeEEEEeCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCEEEEEeCchHHHHHHH
Confidence 99999999999999887776 4799999999999999999999999999999 899999999999999999999
Q ss_pred HHHHhcCCCCCCCCCCCchhhhHHHHHHhccCCCCCCCceeEEeeEeec-CCCCCCCcccccccccCeEEEecHhhhhcC
Q 015796 287 EVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMP-NDDITHPTPDLTGYITEGQIYIDRQLQNRQ 365 (400)
Q Consensus 287 eisl~lg~~p~~~gyp~~~~~~l~~l~ERag~~~~~~GSiT~i~~v~~~-~~d~~dpi~~~~~~i~dg~i~L~r~la~~g 365 (400)
|+|+++||+|+ +|||+++|+.+++|+|||+++. ++||||+|++|++| +||++|||++++++|+||||+|||+||++|
T Consensus 279 evs~~~Ge~ps-~Gyp~~~~~~~~rl~erA~~~~-~~GSIT~i~tvlv~tgdd~~dpI~d~~~~i~dg~ivLsR~La~~g 356 (422)
T 3ice_A 279 TVVPASGKVLT-GGVDANALHRPKRFFGAARNVE-EGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKR 356 (422)
T ss_dssp HHSCCSSCBCS-SSCBHHHHHHHHHHHTTCEEES-SSCEEEEEEEECCSSSCHHHHHHHHHHHHHCSEEEEBCHHHHHTT
T ss_pred HHHHhcCCCCC-CCcCHHHHhhhHHHHHhccccC-CCcceeEEEEEEecCCCcccchHHHHhcccCCceEEEcHHHHhcC
Confidence 99999999998 8999999999999999999875 59999999999999 999999999999999999999999999999
Q ss_pred CCCCcccCCCccccCccccCCCCCchhHHHhhhcC
Q 015796 366 IYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQV 400 (400)
Q Consensus 366 ~~PaID~l~S~SR~~~~~~~~~~~~~~h~~~~~~~ 400 (400)
|||||||+.|+||+|+.+++ ++|++.|++|
T Consensus 357 iyPAIDvl~S~SR~~~~~~~-----~~~~~~a~~l 386 (422)
T 3ice_A 357 VFPAIDYNRSGTRKEELLTT-----QEELQKMWIL 386 (422)
T ss_dssp CSSCBCTTTCEESSGGGSSC-----HHHHHHHHHH
T ss_pred CCCccCccccccccchhhCC-----HHHHHHHHHH
Confidence 99999999999999998776 7899998864
No 17
>2dpy_A FLII, flagellum-specific ATP synthase; beta barrel, alpha-beta structure, hydrolase; HET: ADP; 2.40A {Salmonella typhimurium}
Probab=100.00 E-value=3.9e-64 Score=516.33 Aligned_cols=360 Identities=25% Similarity=0.374 Sum_probs=324.9
Q ss_pred ccccceeeEEEEEECCEEEEecCCCCCCCcEEEEEeCCCc---eeeEEEEEEeCCeEEEEEccCCCCCccCCCEEEEcCC
Q 015796 15 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGT---MRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGE 91 (400)
Q Consensus 15 ~~~~~~~G~V~~I~G~lv~v~gl~~~~iGEl~~v~~~~g~---~~~geVi~~~~~~~~l~~~~~~~Gl~~~g~~V~~tg~ 91 (400)
.++.+.+|+|++|.|++++++|+ .+++||+|+|...+|. .+.|||++|+++.+.+++|+++.|++. |+.|.+||+
T Consensus 4 ~~~~~~~g~v~~v~g~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~~gl~~-g~~v~~~~~ 81 (438)
T 2dpy_A 4 LPAVRRYGRLTRATGLVLEATGL-QLPLGATCIIERQDGPETKEVESEVVGFNGQRLFLMPLEEVEGILP-GARVYARNG 81 (438)
T ss_dssp ---CCCCEEEEECSSSSEEEESC-CCCSSCEEEEEECSTTSCEEEEEEEEECCTTCEEEEESSCCTTCCT-TEEEEEC--
T ss_pred ccccceeeEEEEEECcEEEEEeC-CCCCCCEEEEecCCCCccccEEEEEEEEcCCEEEEEEccCCCCCCC-CCEEEECCC
Confidence 45778899999999999999999 7999999999864554 578999999999999999999999995 999999999
Q ss_pred -------eeeEeCCcCCcceEEcCCCCccCCCCCCCCCceecccCCCCCCCccCCcccccccceeeeeeeeeeccCceee
Q 015796 92 -------VLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIP 164 (400)
Q Consensus 92 -------~~~Vpvg~~lLGrV~D~lG~Pld~~~~~~~~~~~~i~~~~~~~~~R~~~~~~l~TGiraID~l~pigkGqr~~ 164 (400)
++++|+|+++||||+|++|+|+|+.+++....+++++..+|++++|..+++++.||+++||.++||++||+++
T Consensus 82 ~~~~~~~~~~v~~g~~~lgrv~~~lg~p~d~~~~~~~~~~~~i~~~~~~~l~~~~v~~~~~tg~~vld~vl~i~~Gq~~~ 161 (438)
T 2dpy_A 82 HGDGLQSGKQLPLGPALLGRVLDGGGKPLDGLPAPDTLETGALITPPFNPLQRTPIEHVLDTGVRAINALLTVGRGQRMG 161 (438)
T ss_dssp --------CEEECSGGGTTEEECTTCCBSSSSCCCCCSCEEESCCCCCCTTTSCCCCSBCCCSCHHHHHHSCCBTTCEEE
T ss_pred ccccccccEEEEcchhhhhhhhhccCCccCCCCCccccccccccCCCCCceEEeccceecCCCceEEeeeEEecCCCEEE
Confidence 9999999999999999999999998888777888999888899999999999999999999999999999999
Q ss_pred eecCCCCChhhhHHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccchHHHHHHHHHhhhcCCCccEEEEEeCCCC
Q 015796 165 LFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLAND 244 (400)
Q Consensus 165 I~g~~G~GKt~L~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer~e~~~~~~~~l~~~g~l~~t~vv~~t~~~ 244 (400)
|+|++|+|||||+++|+++.. .+ ..++.++|+|.+++.++.+++.+.+.+++++.+++++++
T Consensus 162 IvG~sGsGKSTLl~~Iag~~~-------~~-----------~G~i~~~G~r~~ev~~~~~~~~~~~~l~r~i~~v~q~~~ 223 (438)
T 2dpy_A 162 LFAGSGVGKSVLLGMMARYTR-------AD-----------VIVVGLIGERGREVKDFIENILGPDGRARSVVIAAPADV 223 (438)
T ss_dssp EEECTTSSHHHHHHHHHHHSC-------CS-----------EEEEEEESCCHHHHHHHHHTTTHHHHHHTEEEEEECTTS
T ss_pred EECCCCCCHHHHHHHHhcccC-------CC-----------eEEEEEeceecHHHHHHHHhhccccccCceEEEEECCCC
Confidence 999999999999999998854 33 678899999987777666555444457899999999999
Q ss_pred CHHHHHhHHHHHHHHHHHhhhhCCCeEEEEEcchhhHHHHHHHHHHhcCCCCCCCCCCCchhhhHHHHHHhccCCCCCCC
Q 015796 245 PTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKG 324 (400)
Q Consensus 245 ~~~~r~~a~~~a~tiAEyfr~d~G~~Vlli~Dsltr~a~A~reisl~lg~~p~~~gyp~~~~~~l~~l~ERag~~~~~~G 324 (400)
++..++.+++.++++||||+ +++++|+.++|+++||+.++|++++++++||...|||++.++.+.+|+||+++..+++|
T Consensus 224 ~~~~~~~v~~~~~~~ae~~~-~~~~~v~~~ld~l~~lS~g~qrvslAl~~p~~t~glD~~~~~~l~~ll~r~~~~~~~~G 302 (438)
T 2dpy_A 224 SPLLRMQGAAYATRIAEDFR-DRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGIHGGG 302 (438)
T ss_dssp CHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECHHHHHHHHHHHHHHTTCCCCSSSCCTTHHHHHHHHHTTCSCCSTTSC
T ss_pred CHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHhHHHHHHHHHHHHHHhCCCcccccCCHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999 79999999999999999999999999999999999999999999999999986311359
Q ss_pred ceeEEeeEeecCCCCCCCcccccccccCeEEEecHhhhhcCCCCCcccCCCccccCccccCCCCCchhHHHhhhcC
Q 015796 325 SITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQV 400 (400)
Q Consensus 325 SiT~i~~v~~~~~d~~dpi~~~~~~i~dg~i~L~r~la~~g~~PaID~l~S~SR~~~~~~~~~~~~~~h~~~~~~~ 400 (400)
|||++++|+++++|+++|++|+++.+.||+|++++++++.++|||||++.|+||.++.+ ++++|.++++++
T Consensus 303 siT~~~tVlv~tHdl~~~iad~v~~l~dG~Ivl~~~~~~~~~~Paidv~~s~sR~~~~~-----~~~~~~~~~~~l 373 (438)
T 2dpy_A 303 SITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTAL-----ITEQHYARVRLF 373 (438)
T ss_dssp EEEEEEEEECSSSCSCCHHHHHHHHHSSEEEEECHHHHHTTCSSCEEEEEEEETTHHHH-----SCHHHHHHHHHH
T ss_pred cccceeEEEEeCCCccchhhceEEEEeCcEEEEeCCHHHccCCCCcCCccccccccccc-----CCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998864 568999888753
No 18
>2obl_A ESCN; ATPase, hydrolase; 1.80A {Escherichia coli O127} PDB: 2obm_A*
Probab=100.00 E-value=9.9e-59 Score=463.17 Aligned_cols=282 Identities=27% Similarity=0.459 Sum_probs=260.5
Q ss_pred eeeEeCCcCCcceEEcCCCCccCCCC-CCCCCceecccCCCCCCCccCCcccccccceeeeeeeeeeccCceeeeecCCC
Q 015796 92 VLKTPVSLDMLGRIFNGSGKPIDNGP-PILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAG 170 (400)
Q Consensus 92 ~~~Vpvg~~lLGrV~D~lG~Pld~~~-~~~~~~~~~i~~~~~~~~~R~~~~~~l~TGiraID~l~pigkGqr~~I~g~~G 170 (400)
+++||||++|||||+|++|+|||+.+ ++....++|+++.||++++|..+++++.||+++||.++||++||+++|+|++|
T Consensus 2 ~~~~~vg~~~lGrv~~~~g~p~d~~~~~~~~~~~~~i~~~~~~~i~~~~l~~~~~tg~~ald~ll~i~~Gq~~gIiG~nG 81 (347)
T 2obl_A 2 SHKIRVGDALLGRLIDGIGRPMESNIVAPYLPFERSLYAEPPDPLLRQVIDQPFILGVRAIDGLLTCGIGQRIGIFAGSG 81 (347)
T ss_dssp CCEEEECGGGTTCEECTTSCBCSCCSSCCCCCEEEESCCCCSCSTTCCCCCSEECCSCHHHHHHSCEETTCEEEEEECTT
T ss_pred CceeecCccccCCEECCCCCcCCCCCCCCCCCCcccccCCCCCCeeecccceecCCCCEEEEeeeeecCCCEEEEECCCC
Confidence 68999999999999999999999998 88778889999999999999999999999999999999999999999999999
Q ss_pred CChhhhHHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccchHHHHHHHHHhhhcCCCccEEEEEeCCCCCHHHHH
Q 015796 171 LPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERI 250 (400)
Q Consensus 171 ~GKt~L~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer~e~~~~~~~~l~~~g~l~~t~vv~~t~~~~~~~r~ 250 (400)
+|||||+++|+++.. .+ ..++.++||+.+++.++...+.+ +.+++++++++++++|+..|+
T Consensus 82 aGKTTLl~~I~g~~~-------~~-----------~g~i~~~G~~~~ev~~~i~~~~~-~~~~~~v~~~~~~~~~~~~r~ 142 (347)
T 2obl_A 82 VGKSTLLGMICNGAS-------AD-----------IIVLALIGERGREVNEFLALLPQ-STLSKCVLVVTTSDRPALERM 142 (347)
T ss_dssp SSHHHHHHHHHHHSC-------CS-----------EEEEEEESCCHHHHHHHHTTSCH-HHHTTEEEEEECTTSCHHHHH
T ss_pred CCHHHHHHHHhcCCC-------CC-----------EEEEEEecccHHHHHHHHHhhhh-hhhhceEEEEECCCCCHHHHH
Confidence 999999999998854 33 67889999997666555444433 358899999999999999999
Q ss_pred hHHHHHHHHHHHhhhhCCCeEEEEEcchhhHHHHHHHHHHhcCCCCCCCCCCCchhhhHHHHHHhccCCCCCCCceeEEe
Q 015796 251 ITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIP 330 (400)
Q Consensus 251 ~a~~~a~tiAEyfr~d~G~~Vlli~Dsltr~a~A~reisl~lg~~p~~~gyp~~~~~~l~~l~ERag~~~~~~GSiT~i~ 330 (400)
.+++.++++||||+ ++|++|++++|+++||++|+||+++++++||.+.|||+++++.+.+|+||+++ .++||||+++
T Consensus 143 ~~~~~~~~~ae~~~-~~~~~vl~~ld~~~~lS~g~r~v~lal~~p~~t~Gldp~~~~~l~~ller~~~--~~~GsiT~~~ 219 (347)
T 2obl_A 143 KAAFTATTIAEYFR-DQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERAGP--APKGSITAIY 219 (347)
T ss_dssp HHHHHHHHHHHHHH-TTTCEEEEEEETHHHHHHHHHHHHHHTTCCCCBTTBCHHHHHHHHHHHTTCEE--CSSSEEEEEE
T ss_pred HHHHHHHHHHHHHH-hccccHHHHHhhHHHHHHHHHHHHHHcCCCCcccCCCHHHHHHHHHHHHHHhC--CCCCCeeeEE
Confidence 99999999999999 89999999999999999999999999999999999999999999999999986 2479999999
Q ss_pred eEeecCCCCCCCcccccccccCeEEEecHhhhhcCCCCCcccCCCccccCccccCCCCCchhHHHhhhcC
Q 015796 331 ILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQV 400 (400)
Q Consensus 331 ~v~~~~~d~~dpi~~~~~~i~dg~i~L~r~la~~g~~PaID~l~S~SR~~~~~~~~~~~~~~h~~~~~~~ 400 (400)
+|+++.+|+++|++|+++.+.||||+||+++++.++|||||++.|+||+++.+ ++++|.++|+++
T Consensus 220 tVl~~thdl~~~i~d~v~~i~dG~Ivl~~~l~~~~~~Paid~~~S~sr~~~~~-----~~~~~~~~~~~~ 284 (347)
T 2obl_A 220 TVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSASRVMHNV-----VTSEHLRAAAEC 284 (347)
T ss_dssp EEECCSSCCCCHHHHHHHHHCSEEEEBCHHHHTTTCSSCBCGGGCEETTHHHH-----SCHHHHHHHHHH
T ss_pred EEEEeCCCCCChhhhheEEeeCcEEEEeCCHHHcCCCCCcCcccccccccccc-----CCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999985 458999988763
No 19
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A*
Probab=97.40 E-value=0.00055 Score=61.80 Aligned_cols=42 Identities=19% Similarity=0.266 Sum_probs=37.4
Q ss_pred cccccceeeeeeee--eeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 142 EMIQTGISTIDVMN--SIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 142 ~~l~TGiraID~l~--pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+.+.||+..+|-++ -+-+|+.++|.|++|+|||||+..|+..
T Consensus 5 ~~i~tG~~~LD~~l~ggi~~G~~~~l~G~nGsGKSTll~~l~g~ 48 (231)
T 4a74_A 5 GRISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAVM 48 (231)
T ss_dssp CEECCSCHHHHHHTTSSEESSEEEEEEESTTSSHHHHHHHHHHH
T ss_pred CccCCCChhHHhHhcCCCCCCcEEEEECCCCCCHHHHHHHHHHH
Confidence 56889999999766 6889999999999999999999998764
No 20
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=97.16 E-value=0.00082 Score=60.26 Aligned_cols=39 Identities=18% Similarity=0.255 Sum_probs=36.0
Q ss_pred cccceeeeeeeee--eccCceeeeecCCCCChhhhHHHHHH
Q 015796 144 IQTGISTIDVMNS--IARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 144 l~TGiraID~l~p--igkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
+.||++.+|-++. +.+|+-++|.|++|+|||+|+.+++.
T Consensus 2 i~tG~~~LD~~l~Ggi~~G~~~~i~G~~GsGKTtl~~~l~~ 42 (220)
T 2cvh_A 2 LSTGTKSLDSLLGGGFAPGVLTQVYGPYASGKTTLALQTGL 42 (220)
T ss_dssp BCCSCHHHHHHTTSSBCTTSEEEEECSTTSSHHHHHHHHHH
T ss_pred cccCcHHHHHhhcCCCcCCEEEEEECCCCCCHHHHHHHHHH
Confidence 6899999998875 99999999999999999999998876
No 21
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11
Probab=97.10 E-value=0.0014 Score=59.74 Aligned_cols=43 Identities=19% Similarity=0.260 Sum_probs=38.4
Q ss_pred cccccceeeeeeee--eeccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 142 EMIQTGISTIDVMN--SIARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 142 ~~l~TGiraID~l~--pigkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+.+.||+..+|-++ -+-+|+-++|.|++|+|||+|+.+++.+.
T Consensus 4 ~~i~tG~~~LD~~l~ggi~~G~~~~i~G~~GsGKTtl~~~l~~~~ 48 (243)
T 1n0w_A 4 IQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTC 48 (243)
T ss_dssp CEECCSCHHHHHHTTTSEETTSEEEEECCTTSSHHHHHHHHHHHT
T ss_pred eEecCCChHHHHhhcCCCcCCeEEEEECCCCCcHHHHHHHHHHHH
Confidence 46899999999887 58899999999999999999999988653
No 22
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=97.09 E-value=0.00082 Score=65.96 Aligned_cols=111 Identities=16% Similarity=0.287 Sum_probs=67.3
Q ss_pred cccccceeeeeeeee------eccCceeeeecCCCCChhhhHHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccc
Q 015796 142 EMIQTGISTIDVMNS------IARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVN 215 (400)
Q Consensus 142 ~~l~TGiraID~l~p------igkGqr~~I~g~~G~GKt~L~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer 215 (400)
+.+.||+..+|.++- +.+| .+.|+|++|+|||+|+.+++.++.+ . +.+..|+|+-.-+.
T Consensus 5 ~risTGi~~LD~~LGg~~~GGl~~G-iteI~G~pGsGKTtL~Lq~~~~~~~------~--------g~g~~vlyId~E~s 69 (333)
T 3io5_A 5 DVVRTKIPMMNIALSGEITGGMQSG-LLILAGPSKSFKSNFGLTMVSSYMR------Q--------YPDAVCLFYDSEFG 69 (333)
T ss_dssp -CBCCSCHHHHHHHHSSTTCCBCSE-EEEEEESSSSSHHHHHHHHHHHHHH------H--------CTTCEEEEEESSCC
T ss_pred CEecCCCHHHHHHhCCCCCCCCcCC-eEEEECCCCCCHHHHHHHHHHHHHh------c--------CCCceEEEEeccch
Confidence 457899999999888 7799 9999999999999998777655431 0 01237888665444
Q ss_pred hHHHHHHHHHhhhcCC-CccEEEEEeCCCCCHHHHHhHHHHHHHHHHHh--hhhCCCeEEEEEcchhhHH
Q 015796 216 METAQFFKRDFEENGS-MERVTLFLNLANDPTIERIITPRIALTTAEYL--AYECGKHVLVILTDMSSYA 282 (400)
Q Consensus 216 ~e~~~~~~~~l~~~g~-l~~t~vv~~t~~~~~~~r~~a~~~a~tiAEyf--r~d~G~~Vlli~Dsltr~a 282 (400)
.+.. ..+.| |+ .++ ++++.+. ..++. ++.+++.+ . ..++--++|+||++-+.
T Consensus 70 ~~~~--ra~~l---Gvd~d~-llv~~~~---~~E~~-----~l~i~~~l~~i-~~~~~~lvVIDSI~aL~ 124 (333)
T 3io5_A 70 ITPA--YLRSM---GVDPER-VIHTPVQ---SLEQL-----RIDMVNQLDAI-ERGEKVVVFIDSLGNLA 124 (333)
T ss_dssp CCHH--HHHHT---TCCGGG-EEEEECS---BHHHH-----HHHHHHHHHTC-CTTCCEEEEEECSTTCB
T ss_pred hhHH--HHHHh---CCCHHH-eEEEcCC---CHHHH-----HHHHHHHHHHh-hccCceEEEEecccccc
Confidence 2211 12333 32 233 3444322 12222 13333333 2 35777889999998554
No 23
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=96.99 E-value=0.00071 Score=67.21 Aligned_cols=44 Identities=25% Similarity=0.397 Sum_probs=39.0
Q ss_pred ccccccceeeeeeeee---eccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 141 EEMIQTGISTIDVMNS---IARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 141 ~~~l~TGiraID~l~p---igkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+.+.||+..+|-++. +.+|.-+.|+|++|+|||||+.+++.+.
T Consensus 39 ~~~i~TG~~~LD~~Lg~GGi~~G~i~~I~GppGsGKSTLal~la~~~ 85 (356)
T 3hr8_A 39 VEVIPTGSLAIDIATGVGGYPRGRIVEIFGQESSGKTTLALHAIAEA 85 (356)
T ss_dssp CCEECCSCHHHHHHTSSSSEETTEEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CceecCCCHHHHHHhccCCccCCcEEEEECCCCCCHHHHHHHHHHHH
Confidence 3568999999999887 7799999999999999999998888664
No 24
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=96.95 E-value=0.001 Score=65.72 Aligned_cols=110 Identities=18% Similarity=0.304 Sum_probs=67.7
Q ss_pred ccccccceeeeeeeee---eccCceeeeecCCCCChhhhHHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccchH
Q 015796 141 EEMIQTGISTIDVMNS---IARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNME 217 (400)
Q Consensus 141 ~~~l~TGiraID~l~p---igkGqr~~I~g~~G~GKt~L~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer~e 217 (400)
.+.+.||+..+|-++. +-+|.-+.|.|++|+|||+|+.+++.+... .+..++|+-..+..+
T Consensus 39 ~~~i~TG~~~LD~~Lg~GGl~~G~iv~I~G~pGsGKTtLal~la~~~~~----------------~g~~vlyi~~E~~~~ 102 (349)
T 2zr9_A 39 ISVIPTGSISLDVALGIGGLPRGRVIEIYGPESSGKTTVALHAVANAQA----------------AGGIAAFIDAEHALD 102 (349)
T ss_dssp CCEECCSCHHHHHHTSSSSEETTSEEEEEESTTSSHHHHHHHHHHHHHH----------------TTCCEEEEESSCCCC
T ss_pred CCccccCCHHHHHHhccCCccCCeEEEEECCCCCCHHHHHHHHHHHHHh----------------CCCeEEEEECCCCcC
Confidence 4568999999998876 669999999999999999999888765431 111466666544332
Q ss_pred HHHHHHHHhhhcCC-CccEEEEEeCCCCCHHHHHhHHHHHHHHHHHhhhhCCCeEEEEEcchhhHH
Q 015796 218 TAQFFKRDFEENGS-MERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYA 282 (400)
Q Consensus 218 ~~~~~~~~l~~~g~-l~~t~vv~~t~~~~~~~r~~a~~~a~tiAEyfr~d~G~~Vlli~Dsltr~a 282 (400)
.. ..+.+ |. .++ +.+..+. ..++ .+.+++.+. .+++--++|+|+++.+.
T Consensus 103 ~~--~a~~l---G~~~~~-l~i~~~~---~~e~------~l~~~~~l~-~~~~~~lIVIDsl~~l~ 152 (349)
T 2zr9_A 103 PE--YAKKL---GVDTDS-LLVSQPD---TGEQ------ALEIADMLV-RSGALDIIVIDSVAALV 152 (349)
T ss_dssp HH--HHHHT---TCCGGG-CEEECCS---SHHH------HHHHHHHHH-TTTCCSEEEEECGGGCC
T ss_pred HH--HHHHc---CCCHHH-eEEecCC---CHHH------HHHHHHHHH-hcCCCCEEEEcChHhhc
Confidence 21 11222 32 223 2333221 1232 234566565 44444578889998664
No 25
>2ehv_A Hypothetical protein PH0186; KAIC, RECA ATPase, unknown function; HET: ADP; 2.07A {Pyrococcus horikoshii} PDB: 2zts_A*
Probab=96.81 E-value=0.00097 Score=60.94 Aligned_cols=41 Identities=22% Similarity=0.349 Sum_probs=36.9
Q ss_pred cccccceeeeeeee--eeccCceeeeecCCCCChhhhHHHHHH
Q 015796 142 EMIQTGISTIDVMN--SIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 142 ~~l~TGiraID~l~--pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
+.+.||+..+|-++ -+-+|+-++|.|++|+|||||+..|+.
T Consensus 10 ~~i~tg~~~lD~~l~Ggi~~G~~~~l~GpnGsGKSTLl~~i~~ 52 (251)
T 2ehv_A 10 RRVKSGIPGFDELIEGGFPEGTTVLLTGGTGTGKTTFAAQFIY 52 (251)
T ss_dssp CEECCSCTTTGGGTTTSEETTCEEEEECCTTSSHHHHHHHHHH
T ss_pred ceeecCCHhHHHHhcCCCCCCcEEEEEeCCCCCHHHHHHHHHH
Confidence 45789999999887 689999999999999999999998874
No 26
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=96.75 E-value=0.001 Score=59.78 Aligned_cols=43 Identities=21% Similarity=0.277 Sum_probs=37.6
Q ss_pred cccccceeeeeeeee--eccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 142 EMIQTGISTIDVMNS--IARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 142 ~~l~TGiraID~l~p--igkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+.+.||++.+|-++. +-+|+-++|.|++|+|||||+.+++...
T Consensus 3 ~~i~tg~~~Ld~~~~ggi~~G~~~~i~G~~GsGKTtl~~~l~~~~ 47 (235)
T 2w0m_A 3 SRLSTGILDFDKLIQGGIPQGFFIALTGEPGTGKTIFSLHFIAKG 47 (235)
T ss_dssp CEECCSCHHHHGGGTTSEETTCEEEEECSTTSSHHHHHHHHHHHH
T ss_pred ccccCCchHHHHHhcCCCcCCCEEEEEcCCCCCHHHHHHHHHHHH
Confidence 357899999998874 8899999999999999999999887553
No 27
>2z43_A DNA repair and recombination protein RADA; archaea, filament, DNA binding, molecular SWI RECA, DMC1; HET: DNA; 1.93A {Sulfolobus solfataricus} PDB: 2bke_A* 2dfl_A* 2zub_A* 2zuc_A* 2zud_A*
Probab=96.74 E-value=0.0065 Score=58.89 Aligned_cols=44 Identities=18% Similarity=0.264 Sum_probs=38.9
Q ss_pred ccccccceeeeeeee--eeccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 141 EEMIQTGISTIDVMN--SIARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 141 ~~~l~TGiraID~l~--pigkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+.+.||+..+|-++ -+-+|+-+.|+|++|+|||+|+.+++.+.
T Consensus 86 ~~~i~TG~~~LD~~L~GGl~~G~i~~i~G~~GsGKT~la~~la~~~ 131 (324)
T 2z43_A 86 VKKISTGSQALDGLLAGGIETRTMTEFFGEFGSGKTQLCHQLSVNV 131 (324)
T ss_dssp CCEECCSCHHHHHHTTTSEETTSEEEEEESTTSSHHHHHHHHHHHT
T ss_pred CCcccCCchhHHHhcCCCCCCCcEEEEECCCCCCHhHHHHHHHHHH
Confidence 467899999999887 57799999999999999999999988664
No 28
>1v5w_A DMC1, meiotic recombination protein DMC1/LIM15 homolog; DNA-binding protein, ring protein, octamer, AAA ATPase; 3.20A {Homo sapiens} SCOP: c.37.1.11 PDB: 2zjb_A
Probab=96.68 E-value=0.0075 Score=59.11 Aligned_cols=44 Identities=18% Similarity=0.199 Sum_probs=38.9
Q ss_pred ccccccceeeeeeee--eeccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 141 EEMIQTGISTIDVMN--SIARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 141 ~~~l~TGiraID~l~--pigkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+.+.||++.+|-++ -+-+|+-+.|+|++|+|||+|+.+++.++
T Consensus 101 ~~~i~TG~~~LD~~LgGGl~~G~i~~I~G~~GsGKTtla~~la~~~ 146 (343)
T 1v5w_A 101 VFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTA 146 (343)
T ss_dssp CCCBCCSCHHHHHHTTSSBCSSEEEEEECCTTCTHHHHHHHHHHHT
T ss_pred cceeecCChhHHHHhcCCCCCCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 467899999999887 57799999999999999999999988764
No 29
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=96.64 E-value=0.0021 Score=63.71 Aligned_cols=44 Identities=18% Similarity=0.336 Sum_probs=38.8
Q ss_pred ccccccceeeeeeeee---eccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 141 EEMIQTGISTIDVMNS---IARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 141 ~~~l~TGiraID~l~p---igkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+.+.||+..+|-++. +-+|.-+.|.|++|+|||+|+.+++.+.
T Consensus 41 ~~~i~TG~~~LD~~Lg~GGl~~G~ii~I~G~pGsGKTtLal~la~~~ 87 (356)
T 1u94_A 41 VETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAA 87 (356)
T ss_dssp CCEECCSCHHHHHHTSSSSEETTSEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCcccCCCHHHHHHhccCCccCCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 4568999999999886 7799999999999999999998887664
No 30
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=96.64 E-value=0.0023 Score=63.74 Aligned_cols=110 Identities=19% Similarity=0.298 Sum_probs=67.9
Q ss_pred ccccccceeeeeeeee---eccCceeeeecCCCCChhhhHHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccchH
Q 015796 141 EEMIQTGISTIDVMNS---IARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNME 217 (400)
Q Consensus 141 ~~~l~TGiraID~l~p---igkGqr~~I~g~~G~GKt~L~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer~e 217 (400)
.+.+.||+..+|.++. +-+|.-+.|.|++|+|||+|+.+++.+... .+..++|+-.-+..+
T Consensus 52 ~~~i~TG~~~LD~~Lg~GGl~~G~li~I~G~pGsGKTtlal~la~~~~~----------------~g~~vlyi~~E~s~~ 115 (366)
T 1xp8_A 52 VQVVSTGSLSLDLALGVGGIPRGRITEIYGPESGGKTTLALAIVAQAQK----------------AGGTCAFIDAEHALD 115 (366)
T ss_dssp CCEECCSCHHHHHHTSSSSEETTSEEEEEESTTSSHHHHHHHHHHHHHH----------------TTCCEEEEESSCCCC
T ss_pred CceecCCCHHHHHHhCCCCccCCcEEEEEcCCCCChHHHHHHHHHHHHH----------------CCCeEEEEECCCChh
Confidence 4578999999999886 668999999999999999999888766431 011466666554433
Q ss_pred HHHHHHHHhhhcCC-CccEEEEEeCCCCCHHHHHhHHHHHHHHHHHhhhhCCCeEEEEEcchhhHH
Q 015796 218 TAQFFKRDFEENGS-MERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYA 282 (400)
Q Consensus 218 ~~~~~~~~l~~~g~-l~~t~vv~~t~~~~~~~r~~a~~~a~tiAEyfr~d~G~~Vlli~Dsltr~a 282 (400)
.. ..+.+ |. .++ +.+..+ + ..++ .+.+++.+. ..+.--++|+|+++.+.
T Consensus 116 ~~--~a~~~---g~d~~~-l~i~~~-~--~~e~------~l~~l~~l~-~~~~~~lVVIDsl~~l~ 165 (366)
T 1xp8_A 116 PV--YARAL---GVNTDE-LLVSQP-D--NGEQ------ALEIMELLV-RSGAIDVVVVDSVAALT 165 (366)
T ss_dssp HH--HHHHT---TCCGGG-CEEECC-S--SHHH------HHHHHHHHH-TTTCCSEEEEECTTTCC
T ss_pred HH--HHHHc---CCCHHH-ceeecC-C--cHHH------HHHHHHHHH-hcCCCCEEEEeChHHhc
Confidence 22 11222 22 222 233322 1 1222 334556665 44544577889998553
No 31
>2i1q_A DNA repair and recombination protein RADA; ATPase, recombinase, ATP complex, calcium stimulation, RECA, DMC1; HET: DNA ANP; 1.90A {Methanococcus voltae} SCOP: a.60.4.1 c.37.1.11 PDB: 1xu4_A* 2b21_A* 2fpk_A* 2fpl_A* 2fpm_A* 1t4g_A* 3fyh_A* 2f1j_A* 2f1i_A* 2f1h_A* 3ntu_A* 3ewa_A* 3ew9_A* 3etl_A* 4dc9_A* 2gdj_A*
Probab=96.59 E-value=0.0062 Score=58.71 Aligned_cols=44 Identities=16% Similarity=0.147 Sum_probs=38.5
Q ss_pred ccccccceeeeeeee--eeccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 141 EEMIQTGISTIDVMN--SIARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 141 ~~~l~TGiraID~l~--pigkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+.+.||+..+|-++ -+-+|+-+.|+|++|+|||+|+.+++.++
T Consensus 77 ~~~i~TG~~~LD~~l~GGl~~g~i~~i~G~~gsGKT~la~~la~~~ 122 (322)
T 2i1q_A 77 VWKLSTSSSELDSVLGGGLESQSVTEFAGVFGSGKTQIMHQSCVNL 122 (322)
T ss_dssp CCEECCSCHHHHHHTTSSEETTEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred CCeecCCChhHHHhcCCCccCCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 467899999999887 57789999999999999999999888653
No 32
>1pzn_A RAD51, DNA repair and recombination protein RAD51, RADA; heptameric ring, heptamer, ring, oligomer, RAD51 polymerizat motif; HET: DNA; 2.85A {Pyrococcus furiosus} SCOP: a.60.4.1 c.37.1.11
Probab=96.49 E-value=0.0049 Score=60.68 Aligned_cols=44 Identities=18% Similarity=0.234 Sum_probs=38.5
Q ss_pred ccccccceeeeeeee--eeccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 141 EEMIQTGISTIDVMN--SIARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 141 ~~~l~TGiraID~l~--pigkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+.+.||+..+|-++ -+-+|+-+.|+|++|+|||||+.+++...
T Consensus 110 ~~~isTG~~~LD~lL~ggi~~G~i~~I~G~~GsGKTTL~~~l~~~~ 155 (349)
T 1pzn_A 110 IGRISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAVMV 155 (349)
T ss_dssp CCEECCSCHHHHHHHTSSEESSEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred CCeecCCCHHHHHHhcCCCCCCeEEEEECCCCCCHHHHHHHHHHHh
Confidence 466889999999874 67899999999999999999999987664
No 33
>3lda_A DNA repair protein RAD51; DNA binding protein, ATP-binding, DNA damage, DNA recombinat repair, nucleotide-binding; HET: DNA; 2.50A {Saccharomyces cerevisiae} PDB: 1szp_A*
Probab=96.25 E-value=0.013 Score=59.03 Aligned_cols=44 Identities=14% Similarity=0.238 Sum_probs=38.5
Q ss_pred ccccccceeeeeeee--eeccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 141 EEMIQTGISTIDVMN--SIARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 141 ~~~l~TGiraID~l~--pigkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
...+.||+..+|-++ -+-+|+-+.|+|++|+|||||+.+++...
T Consensus 157 ~~~i~TG~~~LD~lLgGGI~~Gei~~I~G~sGsGKTTLl~~la~~~ 202 (400)
T 3lda_A 157 LICLTTGSKNLDTLLGGGVETGSITELFGEFRTGKSQLCHTLAVTC 202 (400)
T ss_dssp SCEECCSCHHHHHHTTTSEETTSEEEEEESTTSSHHHHHHHHHHHT
T ss_pred CCccccCChhHHHHhcCCcCCCcEEEEEcCCCCChHHHHHHHHHHh
Confidence 467899999999887 68899999999999999999998876443
No 34
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=96.18 E-value=0.003 Score=57.48 Aligned_cols=42 Identities=21% Similarity=0.351 Sum_probs=37.4
Q ss_pred ccccceeeeeeeee--eccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 143 MIQTGISTIDVMNS--IARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 143 ~l~TGiraID~l~p--igkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
-+.||+..+|-++. +-+|+=+.|.|++|+|||+|+.+++.++
T Consensus 11 ri~TGi~~LD~~l~GGl~~G~l~~i~G~pG~GKT~l~l~~~~~~ 54 (251)
T 2zts_A 11 RVKSGIPGFDELIEGGFPEGTTVLLTGGTGTGKTTFAAQFIYKG 54 (251)
T ss_dssp EECCSCTTTGGGTTTSEETTCEEEEECCTTSSHHHHHHHHHHHH
T ss_pred eecCCcHHHHHhhcCCCCCCeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 38999999999886 8899999999999999999998877553
No 35
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=96.12 E-value=0.015 Score=56.12 Aligned_cols=45 Identities=11% Similarity=0.192 Sum_probs=38.1
Q ss_pred ccccccceeeeeeeee-eccCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 141 EEMIQTGISTIDVMNS-IARGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 141 ~~~l~TGiraID~l~p-igkGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
.+.+.||++.+|-++- +-+|+-+.|.|.+|+|||+|+.+++.+..
T Consensus 48 ~~~i~TG~~~LD~~lgGl~~G~l~li~G~pG~GKTtl~l~ia~~~a 93 (315)
T 3bh0_A 48 ITGVPSGFTELDRMTYGYKRRNFVLIAARPSMGKTAFALKQAKNMS 93 (315)
T ss_dssp CCSBCCSCHHHHHHHSSBCTTCEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CCCccCChHHHHhhcCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 3568899999997653 77999999999999999999999886653
No 36
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=96.08 E-value=0.0039 Score=56.69 Aligned_cols=43 Identities=19% Similarity=0.259 Sum_probs=36.5
Q ss_pred cccccceeeeeeee--eeccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 142 EMIQTGISTIDVMN--SIARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 142 ~~l~TGiraID~l~--pigkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+.+.||++.+|-++ -+-+|+-++|.|++|+|||+|+.+++.+.
T Consensus 3 ~~i~tG~~~LD~~l~gGl~~G~~~~i~G~~GsGKTtl~~~~~~~~ 47 (247)
T 2dr3_A 3 RRVKTGIPGVDEILHGGIPERNVVLLSGGPGTGKTIFSQQFLWNG 47 (247)
T ss_dssp CEECCCCTTHHHHTTTSEETTCEEEEEECTTSSHHHHHHHHHHHH
T ss_pred ccccCCchhHHHHcCCCCCCCcEEEEECCCCCCHHHHHHHHHHHH
Confidence 35789999999875 57799999999999999999988776554
No 37
>3cmw_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 2.80A {Escherichia coli} PDB: 3cmt_A* 3cmx_A* 3cmv_A*
Probab=95.76 E-value=0.0088 Score=70.02 Aligned_cols=115 Identities=16% Similarity=0.252 Sum_probs=72.9
Q ss_pred Ccccccccceeeeeeeee---eccCceeeeecCCCCChhhhHHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccc
Q 015796 139 YPEEMIQTGISTIDVMNS---IARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVN 215 (400)
Q Consensus 139 ~~~~~l~TGiraID~l~p---igkGqr~~I~g~~G~GKt~L~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer 215 (400)
...+.+.||+..+|-++. +-+|+-+.|+|++|+|||+|+.+++.++.. .+..|+|+-.-+.
T Consensus 10 ~~~~~isTGi~~LD~lL~~GGi~~G~i~lI~G~pGsGKT~LAlqla~~~~~----------------~G~~vlYI~te~~ 73 (1706)
T 3cmw_A 10 MDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQR----------------EGKTCAFIDAEHA 73 (1706)
T ss_dssp --CCEECCSCHHHHHHTSSSSEETTSEEEEECSTTSSHHHHHHHHHHHHHH----------------TTCCEEEECTTSC
T ss_pred ccCcccccCcHHHHHHhhcCCcCCCeEEEEECCCCCCHHHHHHHHHHHHhh----------------CCCceEEEEecCc
Confidence 445678999999998865 889999999999999999999888765431 1125888888776
Q ss_pred hHHHHHHHHHhhhcCCCccEEEEEeCCCCCHHHHHhHHHHHHHHHHHhhhhCCCeEEEEEcchhhHHHH
Q 015796 216 METAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADA 284 (400)
Q Consensus 216 ~e~~~~~~~~l~~~g~l~~t~vv~~t~~~~~~~r~~a~~~a~tiAEyfr~d~G~~Vlli~Dsltr~a~A 284 (400)
.+... .+.+.- . +++- .+..+ ...++ ...+.+.+. +.++.-+||+||++-+...
T Consensus 74 ~~~l~--~~~lg~-d-l~~i-~i~~p---~t~e~------l~~ll~~L~-~~~~~~LVVIDSLt~L~~~ 127 (1706)
T 3cmw_A 74 LDPIY--ARKLGV-D-IDNL-LCSQP---DTGEQ------ALEICDALA-RSGAVDVIVVDSVAALTPK 127 (1706)
T ss_dssp CCHHH--HHHTTC-C-GGGC-EEECC---SSHHH------HHHHHHHHH-HHTCCSEEEESCSTTCCCH
T ss_pred cHHHH--HHhhcc-C-ccce-eeecc---CcHHH------HHHHHHHHH-hccCCCEEEEcchhhhccc
Confidence 43322 122311 1 2232 23322 11222 234555665 4455668889999977654
No 38
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Probab=95.73 E-value=0.045 Score=56.57 Aligned_cols=43 Identities=16% Similarity=0.246 Sum_probs=35.2
Q ss_pred cccccceeeeeeee--eeccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 142 EMIQTGISTIDVMN--SIARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 142 ~~l~TGiraID~l~--pigkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+.+.||+..+|-++ .+-+|..++|.|++|+|||||+.+++...
T Consensus 261 ~~l~~g~~~ld~vL~g~i~~G~i~~i~G~~GsGKSTLl~~l~g~~ 305 (525)
T 1tf7_A 261 VRVSSGVVRLDEMCGGGFFKDSIILATGATGTGKTLLVSRFVENA 305 (525)
T ss_dssp CEECCSCHHHHHHTTSSEESSCEEEEEECTTSSHHHHHHHHHHHH
T ss_pred ceeecChHHHHHHhCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHH
Confidence 44678887777543 78899999999999999999999987543
No 39
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix}
Probab=95.60 E-value=0.034 Score=53.59 Aligned_cols=101 Identities=8% Similarity=0.048 Sum_probs=56.4
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccchH---HHHHHHHHhhhcCCCcc
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNME---TAQFFKRDFEENGSMER 234 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer~e---~~~~~~~~l~~~g~l~~ 234 (400)
..++.+.|.|++|+|||+|+..+++....... . .+.+..++++-|..... ....+...+...
T Consensus 42 ~~~~~vll~G~~G~GKT~l~~~~~~~~~~~~~----~------~~~~~~~~~i~~~~~~~~~~~~~~l~~~l~~~----- 106 (387)
T 2v1u_A 42 EKPSNALLYGLTGTGKTAVARLVLRRLEARAS----S------LGVLVKPIYVNARHRETPYRVASAIAEAVGVR----- 106 (387)
T ss_dssp CCCCCEEECBCTTSSHHHHHHHHHHHHHHHHH----H------HTCCEEEEEEETTTSCSHHHHHHHHHHHHSCC-----
T ss_pred CCCCcEEEECCCCCCHHHHHHHHHHHHHHHHh----c------cCCCeEEEEEECCcCCCHHHHHHHHHHHhCCC-----
Confidence 56677999999999999999988776421000 0 00123567776665432 233343444211
Q ss_pred EEEEEeCCCCCHHHHHhHHHHHHHHHHHhhhhCCCeEEEEEcchhhHHHH
Q 015796 235 VTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADA 284 (400)
Q Consensus 235 t~vv~~t~~~~~~~r~~a~~~a~tiAEyfr~d~G~~Vlli~Dsltr~a~A 284 (400)
......+...-. -.+.+++. ..++.++|++|++-++...
T Consensus 107 ----~~~~~~~~~~~~------~~l~~~l~-~~~~~~vlilDEi~~l~~~ 145 (387)
T 2v1u_A 107 ----VPFTGLSVGEVY------ERLVKRLS-RLRGIYIIVLDEIDFLPKR 145 (387)
T ss_dssp ----CCSSCCCHHHHH------HHHHHHHT-TSCSEEEEEEETTTHHHHS
T ss_pred ----CCCCCCCHHHHH------HHHHHHHh-ccCCeEEEEEccHhhhccc
Confidence 001111121111 12344555 6788999999999877653
No 40
>1nlf_A Regulatory protein REPA; replicative DNA helicase structural changes, replication; 1.95A {Escherichia coli} SCOP: c.37.1.11 PDB: 1g8y_A 1olo_A
Probab=95.55 E-value=0.0071 Score=56.97 Aligned_cols=46 Identities=20% Similarity=0.190 Sum_probs=37.9
Q ss_pred CCcccccccceeeeeeeee-eccCceeeeecCCCCChhhhHHHHHHH
Q 015796 138 TYPEEMIQTGISTIDVMNS-IARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 138 ~~~~~~l~TGiraID~l~p-igkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
....+.+.||+..+|-++. +-+|+-++|.|++|+|||||+.+++..
T Consensus 7 ~~~~~~i~tg~~~ld~~lggl~~G~i~~i~G~~GsGKTtl~~~l~~~ 53 (279)
T 1nlf_A 7 INILEAFAAAPPPLDYVLPNMVAGTVGALVSPGGAGKSMLALQLAAQ 53 (279)
T ss_dssp CCHHHHHHSCCCCCCEEETTEETTSEEEEEESTTSSHHHHHHHHHHH
T ss_pred cCHHHHhcCCCCChheeECCccCCCEEEEEcCCCCCHHHHHHHHHHH
Confidence 3456778999999986654 558999999999999999999888754
No 41
>1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A*
Probab=95.34 E-value=0.034 Score=54.38 Aligned_cols=98 Identities=12% Similarity=0.136 Sum_probs=53.2
Q ss_pred cCceeee--ecCCCCChhhhHHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccchH---HHHHHHHHhhhcCCCc
Q 015796 159 RGQKIPL--FSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNME---TAQFFKRDFEENGSME 233 (400)
Q Consensus 159 kGqr~~I--~g~~G~GKt~L~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer~e---~~~~~~~~l~~~g~l~ 233 (400)
.++.+.| .|++|+|||+|+..+++...... . ..+.+..++|+-|.+... ....+.+.+... .
T Consensus 49 ~~~~~li~i~G~~G~GKT~L~~~~~~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~- 115 (412)
T 1w5s_A 49 SDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAA-----A-----KEGLTVKQAYVNAFNAPNLYTILSLIVRQTGYP--I- 115 (412)
T ss_dssp CCEEEEEECTTCCSSSHHHHHHHHHHHHHHHH-----H-----HTTCCEEEEEEEGGGCCSHHHHHHHHHHHHTCC--C-
T ss_pred CCCEEEEeCcCcCCCCHHHHHHHHHHHHHHHH-----h-----ccCCceeEEEEECCCCCCHHHHHHHHHHHhCCC--C-
Confidence 4456777 89999999999998876543100 0 000134677777755432 233333333211 0
Q ss_pred cEEEEEeCCCCCHHHHHhHHHHHHHHHHHhhhhCCCeEEEEEcchhhHH
Q 015796 234 RVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYA 282 (400)
Q Consensus 234 ~t~vv~~t~~~~~~~r~~a~~~a~tiAEyfr~d~G~~Vlli~Dsltr~a 282 (400)
.....+... ..-.+.+++. ..++.+++++|++-.+.
T Consensus 116 ------~~~~~~~~~------~~~~l~~~l~-~~~~~~llvlDe~~~l~ 151 (412)
T 1w5s_A 116 ------QVRGAPALD------ILKALVDNLY-VENHYLLVILDEFQSML 151 (412)
T ss_dssp ------CCTTCCHHH------HHHHHHHHHH-HHTCEEEEEEESTHHHH
T ss_pred ------CCCCCCHHH------HHHHHHHHHH-hcCCeEEEEEeCHHHHh
Confidence 001111111 1223445555 56889999999987654
No 42
>1cr0_A DNA primase/helicase; RECA-type protein fold, transferase; HET: DNA; 2.30A {Enterobacteria phage T7} SCOP: c.37.1.11 PDB: 1cr1_A* 1cr2_A* 1cr4_A* 1e0j_A* 1e0k_A*
Probab=95.32 E-value=0.0057 Score=58.04 Aligned_cols=43 Identities=19% Similarity=0.132 Sum_probs=36.3
Q ss_pred ccccc-ceeeeee-eeeeccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 142 EMIQT-GISTIDV-MNSIARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 142 ~~l~T-GiraID~-l~pigkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+-+.| |+.++|- .+.+-+|+-++|.|++|+|||||+.+|+...
T Consensus 15 ~~i~t~g~~~Ld~i~~~l~~G~~~~i~G~~G~GKTTl~~~ia~~~ 59 (296)
T 1cr0_A 15 VGLLFSGCTGINDKTLGARGGEVIMVTSGSGMGKSTFVRQQALQW 59 (296)
T ss_dssp CCBCCCSCTTHHHHHCSBCTTCEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CCcccCCHHHHHHHhcCCCCCeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 34678 9998974 4678899999999999999999999887654
No 43
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25
Probab=95.16 E-value=0.0097 Score=52.15 Aligned_cols=30 Identities=20% Similarity=0.209 Sum_probs=24.7
Q ss_pred eeeeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 154 MNSIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 154 l~pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|..+.+|+.++|.|++|+|||||+..|+..
T Consensus 3 m~~i~~g~~i~l~G~~GsGKSTl~~~La~~ 32 (191)
T 1zp6_A 3 MTDDLGGNILLLSGHPGSGKSTIAEALANL 32 (191)
T ss_dssp ---CCTTEEEEEEECTTSCHHHHHHHHHTC
T ss_pred ccCCCCCeEEEEECCCCCCHHHHHHHHHhc
Confidence 456789999999999999999999998654
No 44
>3cmu_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 4.20A {Escherichia coli}
Probab=95.12 E-value=0.019 Score=68.25 Aligned_cols=112 Identities=17% Similarity=0.270 Sum_probs=70.7
Q ss_pred CCcccccccceeeeeeeee---eccCceeeeecCCCCChhhhHHHHHHHhccchhhcccccccccCCCCCeEEEEEEecc
Q 015796 138 TYPEEMIQTGISTIDVMNS---IARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGV 214 (400)
Q Consensus 138 ~~~~~~l~TGiraID~l~p---igkGqr~~I~g~~G~GKt~L~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGe 214 (400)
....+.+.||+..+|.++. +-+|.-+.|+|++|+|||+|+..++..+.. .+..|+|.-.-+
T Consensus 1402 ~~~~~~isTG~~~LD~lLG~GGi~~g~~vll~GppGtGKT~LA~ala~ea~~----------------~G~~v~Fi~~e~ 1465 (2050)
T 3cmu_A 1402 SMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQR----------------EGKTCAFIDAEH 1465 (2050)
T ss_dssp TTSCCEECCSCHHHHHHHSSSSEETTSEEEEECCTTSSHHHHHHHHHHHHHT----------------TTCCEEEECTTS
T ss_pred ccccccccCCCHHHHHhcCCCCccCCeEEEEECCCCCCHHHHHHHHHHHHHH----------------cCCcEEEEEccc
Confidence 3456789999999999999 779999999999999999999888766542 112466665554
Q ss_pred c-hHHHHHHHHHhhhcCC-CccEEEEEeCCCCCHHHHHhHHHHHHHHHHHhhhhCCCeEEEEEcchhhHH
Q 015796 215 N-METAQFFKRDFEENGS-MERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYA 282 (400)
Q Consensus 215 r-~e~~~~~~~~l~~~g~-l~~t~vv~~t~~~~~~~r~~a~~~a~tiAEyfr~d~G~~Vlli~Dsltr~a 282 (400)
. .... .+.+ |. +++ +.+.+.+ +.+ .++.+.+.+. ++++--+||+|++.-|+
T Consensus 1466 ~~~~l~---a~~~---G~dl~~--l~v~~~~--~~E------~~l~~~~~lv-r~~~~~lVVIDsi~al~ 1518 (2050)
T 3cmu_A 1466 ALDPIY---ARKL---GVDIDN--LLCSQPD--TGE------QALEICDALA-RSGAVDVIVVDSVAALT 1518 (2050)
T ss_dssp CCCHHH---HHHT---TCCTTT--CEEECCS--SHH------HHHHHHHHHH-HHTCCSEEEESCGGGCC
T ss_pred ccCHHH---HHHc---CCCchh--ceeecCC--hHH------HHHHHHHHHH-hcCCCCEEEEcChhHhc
Confidence 3 2222 1222 21 233 2333333 223 3334555554 34555578889997554
No 45
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=95.11 E-value=0.065 Score=51.47 Aligned_cols=99 Identities=9% Similarity=0.130 Sum_probs=53.6
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccchHHHHHHHHHhhhcCCCccEEE
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTL 237 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer~e~~~~~~~~l~~~g~l~~t~v 237 (400)
..++-+.|.|++|+|||+|+..+++..... . +.+..++++-|.+.......+..-+..-+ ..
T Consensus 43 ~~~~~vli~G~~G~GKTtl~~~l~~~~~~~------~-------~~~~~~~~i~~~~~~~~~~~~~~i~~~l~---~~-- 104 (386)
T 2qby_A 43 EKPNNIFIYGLTGTGKTAVVKFVLSKLHKK------F-------LGKFKHVYINTRQIDTPYRVLADLLESLD---VK-- 104 (386)
T ss_dssp CCCCCEEEEECTTSSHHHHHHHHHHHHHHH------T-------CSSCEEEEEEHHHHCSHHHHHHHHTTTTS---CC--
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHHHHH------h-------cCCceEEEEECCCCCCHHHHHHHHHHHhC---CC--
Confidence 456789999999999999999987764310 0 00235677776554322222222222111 10
Q ss_pred EEeCCCCCHHHHHhHHHHHHHHHHHhhhhCCCeEEEEEcchhhHH
Q 015796 238 FLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYA 282 (400)
Q Consensus 238 v~~t~~~~~~~r~~a~~~a~tiAEyfr~d~G~~Vlli~Dsltr~a 282 (400)
......+..... -.+.+++. ..++.+++++|++....
T Consensus 105 -~~~~~~~~~~~~------~~l~~~l~-~~~~~~vlilDE~~~l~ 141 (386)
T 2qby_A 105 -VPFTGLSIAELY------RRLVKAVR-DYGSQVVIVLDEIDAFV 141 (386)
T ss_dssp -CCSSSCCHHHHH------HHHHHHHH-TCCSCEEEEEETHHHHH
T ss_pred -CCCCCCCHHHHH------HHHHHHHh-ccCCeEEEEEcChhhhh
Confidence 000111111111 12345555 66778999999987654
No 46
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=95.10 E-value=0.058 Score=54.64 Aligned_cols=44 Identities=20% Similarity=0.310 Sum_probs=37.7
Q ss_pred cccccceeeeeeee-eeccCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 142 EMIQTGISTIDVMN-SIARGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 142 ~~l~TGiraID~l~-pigkGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
..+.||+..+|-++ -+-+|+-+.|.|++|+|||+|+.+++.+..
T Consensus 184 ~~i~tG~~~LD~~~gGl~~G~liiI~G~pG~GKTtl~l~ia~~~~ 228 (454)
T 2r6a_A 184 TGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVA 228 (454)
T ss_dssp CSBCCSCHHHHHHHSSBCTTCEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCcHHHHhhcCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 56889999998665 477999999999999999999998887653
No 47
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=95.06 E-value=0.011 Score=53.97 Aligned_cols=29 Identities=7% Similarity=0.200 Sum_probs=23.3
Q ss_pred eeeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 155 NSIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 155 ~pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+.+-+|+.++|.|++|+|||||+..|+..
T Consensus 18 l~i~~G~~~~lvGpsGsGKSTLl~~L~g~ 46 (218)
T 1z6g_A 18 GSMNNIYPLVICGPSGVGKGTLIKKLLNE 46 (218)
T ss_dssp ----CCCCEEEECSTTSSHHHHHHHHHHH
T ss_pred eecCCCCEEEEECCCCCCHHHHHHHHHhh
Confidence 66789999999999999999999998764
No 48
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20
Probab=95.00 E-value=0.12 Score=49.83 Aligned_cols=89 Identities=11% Similarity=0.018 Sum_probs=50.0
Q ss_pred eeeeecCCCCChhhhHHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccchH---HHHHHHHHhhhcCCCccEEEE
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNME---TAQFFKRDFEENGSMERVTLF 238 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer~e---~~~~~~~~l~~~g~l~~t~vv 238 (400)
.+.|.|++|+|||+|+..+++.... . .+..++++-|..... ....+...+...
T Consensus 46 ~~li~G~~G~GKTtl~~~l~~~~~~-------~--------~~~~~~~i~~~~~~~~~~~~~~l~~~l~~~--------- 101 (389)
T 1fnn_A 46 RATLLGRPGTGKTVTLRKLWELYKD-------K--------TTARFVYINGFIYRNFTAIIGEIARSLNIP--------- 101 (389)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTT-------S--------CCCEEEEEETTTCCSHHHHHHHHHHHTTCC---------
T ss_pred eEEEECCCCCCHHHHHHHHHHHHhh-------h--------cCeeEEEEeCccCCCHHHHHHHHHHHhCcc---------
Confidence 7999999999999999998876431 1 023567777665432 233333333110
Q ss_pred EeCCCCCHHHHHhHHHHHHHHHHHhhhhCCCeEEEEEcchhhH
Q 015796 239 LNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSY 281 (400)
Q Consensus 239 ~~t~~~~~~~r~~a~~~a~tiAEyfr~d~G~~Vlli~Dsltr~ 281 (400)
......+...- --.+.+++. ..++.+++++|++...
T Consensus 102 ~~~~~~~~~~~------~~~l~~~l~-~~~~~~vlilDE~~~l 137 (389)
T 1fnn_A 102 FPRRGLSRDEF------LALLVEHLR-ERDLYMFLVLDDAFNL 137 (389)
T ss_dssp CCSSCCCHHHH------HHHHHHHHH-HTTCCEEEEEETGGGS
T ss_pred CCCCCCCHHHH------HHHHHHHHh-hcCCeEEEEEECcccc
Confidence 00111111111 112344555 5677889999998754
No 49
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=94.99 E-value=0.013 Score=52.66 Aligned_cols=29 Identities=10% Similarity=0.171 Sum_probs=23.8
Q ss_pred eeccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 156 SIARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 156 pigkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
++-+|+.++|+|++|+|||||+..|+..-
T Consensus 16 ~i~~Gei~~l~GpnGsGKSTLl~~l~gl~ 44 (207)
T 1znw_A 16 PAAVGRVVVLSGPSAVGKSTVVRCLRERI 44 (207)
T ss_dssp ---CCCEEEEECSTTSSHHHHHHHHHHHS
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHhhC
Confidence 78899999999999999999999987653
No 50
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=94.96 E-value=0.015 Score=54.03 Aligned_cols=34 Identities=15% Similarity=0.244 Sum_probs=29.2
Q ss_pred eee-eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 149 STI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 149 raI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
.++ |.=+.+.+|+.++|.|++|+|||||+..|+.
T Consensus 19 ~~L~~isl~i~~Ge~~~iiG~nGsGKSTLl~~l~G 53 (235)
T 3tif_A 19 YALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGC 53 (235)
T ss_dssp EEEEEEEEEECTTCEEEEECSTTSSHHHHHHHHTT
T ss_pred eeEEeeeEEEcCCCEEEEECCCCCcHHHHHHHHhc
Confidence 456 4558899999999999999999999998854
No 51
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=94.92 E-value=0.014 Score=51.63 Aligned_cols=27 Identities=4% Similarity=0.217 Sum_probs=23.8
Q ss_pred eccCceeeeecCCCCChhhhHHHHHHH
Q 015796 157 IARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 157 igkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+-+|+.++|.|++|+|||||+.+|+..
T Consensus 4 m~~g~ii~l~Gp~GsGKSTl~~~L~~~ 30 (205)
T 3tr0_A 4 MNKANLFIISAPSGAGKTSLVRALVKA 30 (205)
T ss_dssp -CCCCEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCCCcEEEEECcCCCCHHHHHHHHHhh
Confidence 457999999999999999999998765
No 52
>3cmu_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 4.20A {Escherichia coli}
Probab=94.90 E-value=0.022 Score=67.68 Aligned_cols=117 Identities=15% Similarity=0.259 Sum_probs=74.2
Q ss_pred cCCcccccccceeeeeeeee---eccCceeeeecCCCCChhhhHHHHHHHhccchhhcccccccccCCCCCeEEEEEEec
Q 015796 137 RTYPEEMIQTGISTIDVMNS---IARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMG 213 (400)
Q Consensus 137 R~~~~~~l~TGiraID~l~p---igkGqr~~I~g~~G~GKt~L~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iG 213 (400)
+.+..+.+.||+..+|-++. +-+|.-+.|.|++|+|||+|+.+++.+... .+..|+|+-.-
T Consensus 8 ~~~~~~~i~TGi~~LD~lLg~GGip~G~vtlI~G~pGsGKT~lalq~a~~~~~----------------~Ge~vlYI~tE 71 (2050)
T 3cmu_A 8 RSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQR----------------EGKTCAFIDAE 71 (2050)
T ss_dssp ----CCEECCSCHHHHHHHSSSSEETTSEEEEECCTTSSHHHHHHHHHHHHHT----------------TTCCEEEECTT
T ss_pred hccCCCeeccCcHHHHHHHhcCCCcCCEEEEEEeCCCCCHHHHHHHHHHHhhc----------------cCCceEEEEcc
Confidence 44455779999999998774 779999999999999999999888755431 11268888887
Q ss_pred cchHHHHHHHHHhhhcCCCccEEEEEeCCCCCHHHHHhHHHHHHHHHHHhhhhCCCeEEEEEcchhhHHHH
Q 015796 214 VNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADA 284 (400)
Q Consensus 214 er~e~~~~~~~~l~~~g~l~~t~vv~~t~~~~~~~r~~a~~~a~tiAEyfr~d~G~~Vlli~Dsltr~a~A 284 (400)
+..+... .+.+.- . +++-. +..+ + ..++ .+.+.+++. +.++--++|+||++-+...
T Consensus 72 es~~~~r--a~~lG~-d-l~~i~-v~~p-~--~~e~------ll~il~~L~-~~~~~~lVVIDSISaL~~~ 127 (2050)
T 3cmu_A 72 HALDPIY--ARKLGV-D-IDNLL-CSQP-D--TGEQ------ALEICDALA-RSGAVDVIVVDSVAALTPK 127 (2050)
T ss_dssp SCCCHHH--HHHTTC-C-TTTCE-EECC-S--SHHH------HHHHHHHHH-HHTCCSEEEESCGGGCCCH
T ss_pred CcchhhH--Hhhhcc-C-cccce-ecCC-C--cHHH------HHHHHHHHH-hccCCcEEEEcChHHhhhh
Confidence 7644332 123321 1 34433 3322 1 1222 245566666 4566668889999876554
No 53
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=94.85 E-value=0.015 Score=53.40 Aligned_cols=34 Identities=12% Similarity=0.251 Sum_probs=28.6
Q ss_pred eee-eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 149 STI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 149 raI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
.++ |.=+.+-+|+.++|.|++|+|||||+..|+.
T Consensus 18 ~~l~~vsl~i~~Ge~~~iiG~nGsGKSTLl~~l~G 52 (224)
T 2pcj_A 18 EILKGISLSVKKGEFVSIIGASGSGKSTLLYILGL 52 (224)
T ss_dssp EEEEEEEEEEETTCEEEEEECTTSCHHHHHHHHTT
T ss_pred eeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhc
Confidence 345 4558899999999999999999999998853
No 54
>2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens}
Probab=94.78 E-value=0.017 Score=53.60 Aligned_cols=32 Identities=13% Similarity=0.277 Sum_probs=27.8
Q ss_pred eeeeeeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 152 DVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 152 D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|.=+.+-+|+.++|.|++|+|||||+..|+..
T Consensus 23 ~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl 54 (237)
T 2cbz_A 23 GITFSIPEGALVAVVGQVGCGKSSLLSALLAE 54 (237)
T ss_dssp EEEEEECTTCEEEEECSTTSSHHHHHHHHTTC
T ss_pred eeEEEECCCCEEEEECCCCCCHHHHHHHHhcC
Confidence 34478999999999999999999999988643
No 55
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A*
Probab=94.71 E-value=0.018 Score=53.83 Aligned_cols=33 Identities=21% Similarity=0.349 Sum_probs=28.3
Q ss_pred ee-eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 150 TI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 150 aI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
++ |.=+.+-+|+.++|.|++|+|||||+..|+.
T Consensus 24 vl~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G 57 (247)
T 2ff7_A 24 ILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQR 57 (247)
T ss_dssp EEEEEEEEEETTCEEEEECSTTSSHHHHHHHHTT
T ss_pred eeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhc
Confidence 44 3447899999999999999999999998854
No 56
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=94.68 E-value=0.08 Score=53.47 Aligned_cols=44 Identities=16% Similarity=0.277 Sum_probs=36.4
Q ss_pred cccccceeeeeeee-eeccCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 142 EMIQTGISTIDVMN-SIARGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 142 ~~l~TGiraID~l~-pigkGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
..+.||+..+|-++ -+-+|+-+.|.|++|+|||+|+.+++.+..
T Consensus 181 ~~i~tG~~~LD~~lgGl~~G~l~ii~G~pg~GKT~lal~ia~~~a 225 (444)
T 2q6t_A 181 AGVRTGFKELDQLIGTLGPGSLNIIAARPAMGKTAFALTIAQNAA 225 (444)
T ss_dssp --CCCSCHHHHHHHCCCCTTCEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CcccCCCHhhhhhcCCcCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 56789999999776 366999999999999999999988887653
No 57
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=94.63 E-value=0.023 Score=53.12 Aligned_cols=34 Identities=12% Similarity=0.260 Sum_probs=29.2
Q ss_pred eee-eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 149 STI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 149 raI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
.++ |.=+.+.+|+.++|.|++|+|||||+..|+.
T Consensus 17 ~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G 51 (250)
T 2d2e_A 17 TILKGVNLVVPKGEVHALMGPNGAGKSTLGKILAG 51 (250)
T ss_dssp EEEEEEEEEEETTCEEEEECSTTSSHHHHHHHHHT
T ss_pred EEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhC
Confidence 345 4458899999999999999999999999875
No 58
>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A
Probab=94.63 E-value=0.023 Score=53.77 Aligned_cols=35 Identities=9% Similarity=0.221 Sum_probs=29.7
Q ss_pred eeee-eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 148 ISTI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 148 iraI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
..++ |.=+.+-+|+.++|.|++|+|||||+..|+.
T Consensus 33 ~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G 68 (267)
T 2zu0_C 33 KAILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAG 68 (267)
T ss_dssp EEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHT
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhC
Confidence 3455 3458899999999999999999999999875
No 59
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=94.61 E-value=0.019 Score=54.08 Aligned_cols=34 Identities=15% Similarity=0.169 Sum_probs=28.8
Q ss_pred eee-eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 149 STI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 149 raI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
.++ |.=+.+.+|+.++|+|++|+|||||+..|+.
T Consensus 20 ~vl~~vsl~i~~Ge~~~liG~nGsGKSTLlk~l~G 54 (262)
T 1b0u_A 20 EVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINF 54 (262)
T ss_dssp EEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHTT
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhc
Confidence 345 3457899999999999999999999998853
No 60
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=94.60 E-value=0.019 Score=54.31 Aligned_cols=35 Identities=17% Similarity=0.283 Sum_probs=29.6
Q ss_pred eeeee-eeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 148 ISTID-VMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 148 iraID-~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
..+++ .=+.+.+|+.++|.|++|+|||||+..|+.
T Consensus 24 ~~vL~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G 59 (266)
T 4g1u_C 24 QALINDVSLHIASGEMVAIIGPNGAGKSTLLRLLTG 59 (266)
T ss_dssp EEEEEEEEEEEETTCEEEEECCTTSCHHHHHHHHTS
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhc
Confidence 44564 448899999999999999999999998853
No 61
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae}
Probab=94.60 E-value=0.022 Score=56.55 Aligned_cols=36 Identities=14% Similarity=0.266 Sum_probs=30.9
Q ss_pred ceeee-eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 147 GISTI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 147 GiraI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
+..++ |.=+.+.+|+.++|+|++|+|||||+.+|+.
T Consensus 16 ~~~~L~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaG 52 (359)
T 3fvq_A 16 NTPVLNDISLSLDPGEILFIIGASGCGKTTLLRCLAG 52 (359)
T ss_dssp TEEEEEEEEEEECTTCEEEEEESTTSSHHHHHHHHHT
T ss_pred CEEEEEeeEEEEcCCCEEEEECCCCchHHHHHHHHhc
Confidence 34566 4558999999999999999999999999875
No 62
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A
Probab=94.57 E-value=0.018 Score=50.31 Aligned_cols=30 Identities=7% Similarity=0.038 Sum_probs=26.7
Q ss_pred eeeccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 155 NSIARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 155 ~pigkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+.+.+|+.++|.|+.|+|||||++.|+..-
T Consensus 28 l~i~~Ge~v~L~G~nGaGKTTLlr~l~g~l 57 (158)
T 1htw_A 28 LHTEKAIMVYLNGDLGAGKTTLTRGMLQGI 57 (158)
T ss_dssp HCCSSCEEEEEECSTTSSHHHHHHHHHHHT
T ss_pred cccCCCCEEEEECCCCCCHHHHHHHHHHhC
Confidence 567899999999999999999999987653
No 63
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=94.55 E-value=0.02 Score=54.53 Aligned_cols=34 Identities=12% Similarity=0.299 Sum_probs=29.0
Q ss_pred eee-eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 149 STI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 149 raI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
.++ |.=+.+.+|+.++|.|++|+|||||+..|+.
T Consensus 22 ~~L~~isl~i~~Ge~~~iiGpnGsGKSTLl~~l~G 56 (275)
T 3gfo_A 22 HALKGINMNIKRGEVTAILGGNGVGKSTLFQNFNG 56 (275)
T ss_dssp EEEEEEEEEEETTSEEEEECCTTSSHHHHHHHHTT
T ss_pred eEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHc
Confidence 355 4458899999999999999999999998853
No 64
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=94.53 E-value=0.021 Score=54.05 Aligned_cols=34 Identities=9% Similarity=0.177 Sum_probs=28.9
Q ss_pred eee-eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 149 STI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 149 raI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
.++ |.=+.+.+|+.++|.|++|+|||||+..|+.
T Consensus 38 ~vL~~vsl~i~~Gei~~liG~NGsGKSTLlk~l~G 72 (263)
T 2olj_A 38 EVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNL 72 (263)
T ss_dssp EEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHTT
T ss_pred EEEEeeEEEEcCCCEEEEEcCCCCcHHHHHHHHHc
Confidence 355 3558899999999999999999999998854
No 65
>2pze_A Cystic fibrosis transmembrane conductance regulat; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A
Probab=94.52 E-value=0.021 Score=52.61 Aligned_cols=31 Identities=23% Similarity=0.327 Sum_probs=27.3
Q ss_pred eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 152 DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 152 D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
|.=+.+-+|+.++|.|++|+|||||+..|+.
T Consensus 26 ~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G 56 (229)
T 2pze_A 26 DINFKIERGQLLAVAGSTGAGKTSLLMMIMG 56 (229)
T ss_dssp EEEEEEETTCEEEEECCTTSSHHHHHHHHTT
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhC
Confidence 3447889999999999999999999998864
No 66
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=94.51 E-value=0.021 Score=53.74 Aligned_cols=34 Identities=15% Similarity=0.209 Sum_probs=28.7
Q ss_pred eee-eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 149 STI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 149 raI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
.++ |.=+.+.+|+.++|.|++|+|||||+..|+.
T Consensus 29 ~vl~~vsl~i~~Gei~~l~G~NGsGKSTLlk~l~G 63 (256)
T 1vpl_A 29 EILKGISFEIEEGEIFGLIGPNGAGKTTTLRIIST 63 (256)
T ss_dssp EEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHTT
T ss_pred EEEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhc
Confidence 345 3447899999999999999999999998853
No 67
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=94.51 E-value=0.02 Score=52.54 Aligned_cols=34 Identities=12% Similarity=0.348 Sum_probs=28.5
Q ss_pred eee-eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 149 STI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 149 raI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
.++ |.=+.+-+|+.++|.|++|+|||||+..|+.
T Consensus 23 ~il~~vsl~i~~Ge~~~iiG~NGsGKSTLlk~l~G 57 (214)
T 1sgw_A 23 PVLERITMTIEKGNVVNFHGPNGIGKTTLLKTIST 57 (214)
T ss_dssp EEEEEEEEEEETTCCEEEECCTTSSHHHHHHHHTT
T ss_pred eEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhc
Confidence 344 3447889999999999999999999998854
No 68
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=94.49 E-value=0.022 Score=52.91 Aligned_cols=33 Identities=24% Similarity=0.358 Sum_probs=28.2
Q ss_pred ee-eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 150 TI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 150 aI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
++ |.=+.+-+|+.++|.|++|+|||||+..|+.
T Consensus 21 vl~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~G 54 (240)
T 1ji0_A 21 AIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAG 54 (240)
T ss_dssp EEEEEEEEEETTCEEEEECSTTSSHHHHHHHHTT
T ss_pred EEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhC
Confidence 44 3447889999999999999999999998853
No 69
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=94.49 E-value=0.021 Score=54.43 Aligned_cols=34 Identities=18% Similarity=0.301 Sum_probs=29.0
Q ss_pred eee-eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 149 STI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 149 raI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
.++ |.=+.+.+|+.++|.|++|+|||||+..|+.
T Consensus 35 ~vL~~isl~i~~Ge~~~liG~NGsGKSTLlk~l~G 69 (279)
T 2ihy_A 35 TILKKISWQIAKGDKWILYGLNGAGKTTLLNILNA 69 (279)
T ss_dssp EEEEEEEEEEETTCEEEEECCTTSSHHHHHHHHTT
T ss_pred EEEEeeeEEEcCCCEEEEECCCCCcHHHHHHHHhC
Confidence 345 4558899999999999999999999998854
No 70
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=94.44 E-value=0.02 Score=53.74 Aligned_cols=34 Identities=18% Similarity=0.288 Sum_probs=28.8
Q ss_pred eeee-eeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 149 STID-VMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 149 raID-~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
.+++ .=+.+-+|+.++|.|++|+|||||+..|+.
T Consensus 21 ~vl~~vsl~i~~Ge~~~liG~nGsGKSTLlk~l~G 55 (257)
T 1g6h_A 21 KALDGVSISVNKGDVTLIIGPNGSGKSTLINVITG 55 (257)
T ss_dssp EEEEEECCEEETTCEEEEECSTTSSHHHHHHHHTT
T ss_pred eeEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhC
Confidence 4553 447899999999999999999999998853
No 71
>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12
Probab=94.44 E-value=0.022 Score=52.98 Aligned_cols=31 Identities=16% Similarity=0.148 Sum_probs=27.3
Q ss_pred eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 152 DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 152 D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
|.=+.+-+|+.++|.|++|+|||||+..|+.
T Consensus 20 ~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G 50 (243)
T 1mv5_A 20 DISFEAQPNSIIAFAGPSGGGKSTIFSLLER 50 (243)
T ss_dssp EEEEEECTTEEEEEECCTTSSHHHHHHHHTT
T ss_pred EeEEEEcCCCEEEEECCCCCCHHHHHHHHhc
Confidence 3447889999999999999999999998864
No 72
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A*
Probab=94.42 E-value=0.023 Score=53.90 Aligned_cols=31 Identities=16% Similarity=0.231 Sum_probs=27.3
Q ss_pred eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 152 DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 152 D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
|.=+.+-+|+.++|.|++|+|||||+..|+.
T Consensus 37 ~vsl~i~~Ge~~~i~G~nGsGKSTLlk~l~G 67 (271)
T 2ixe_A 37 GLTFTLYPGKVTALVGPNGSGKSTVAALLQN 67 (271)
T ss_dssp EEEEEECTTCEEEEECSTTSSHHHHHHHHTT
T ss_pred eeEEEECCCCEEEEECCCCCCHHHHHHHHhc
Confidence 3447899999999999999999999998854
No 73
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=94.40 E-value=0.12 Score=50.67 Aligned_cols=44 Identities=14% Similarity=0.197 Sum_probs=38.0
Q ss_pred cccccceeeeeeee-eeccCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 142 EMIQTGISTIDVMN-SIARGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 142 ~~l~TGiraID~l~-pigkGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
..+.||+..+|-++ -+-+|+=+.|.|.+|+|||+|+.+++.+..
T Consensus 27 ~gi~TG~~~LD~~~gGl~~G~LiiIaG~pG~GKTt~al~ia~~~a 71 (338)
T 4a1f_A 27 TGIPTGFVQLDNYTSGFNKGSLVIIGARPSMGKTSLMMNMVLSAL 71 (338)
T ss_dssp CSBCCSCHHHHHHHCSBCTTCEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CcccCCChHHHHHhcCCCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 46889999999766 488999999999999999999999887653
No 74
>3cmw_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 2.80A {Escherichia coli} PDB: 3cmt_A* 3cmx_A* 3cmv_A*
Probab=94.40 E-value=0.033 Score=65.31 Aligned_cols=45 Identities=18% Similarity=0.321 Sum_probs=39.8
Q ss_pred ccccccceeeeeeeee---eccCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 141 EEMIQTGISTIDVMNS---IARGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 141 ~~~l~TGiraID~l~p---igkGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
.+.+.||+..+|-++. +-+|.-+.|.|++|+|||+|+.+++.++.
T Consensus 361 ~~~isTGi~~LD~lLg~GGl~~G~lilI~G~pGsGKTtLaLq~a~~~~ 408 (1706)
T 3cmw_A 361 VETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQ 408 (1706)
T ss_dssp CCEECCSCHHHHHHTSSSSEETTSEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CceeccCcHHHHHHhccCCcCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 4678999999999987 77999999999999999999988876653
No 75
>2qi9_C Vitamin B12 import ATP-binding protein BTUD; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_C* 4dbl_C
Probab=94.38 E-value=0.024 Score=53.20 Aligned_cols=31 Identities=13% Similarity=0.295 Sum_probs=27.3
Q ss_pred eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 152 DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 152 D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
|.=+.+.+|+.++|.|++|+|||||+..|+.
T Consensus 18 ~vsl~i~~Ge~~~liG~NGsGKSTLlk~l~G 48 (249)
T 2qi9_C 18 PLSGEVRAGEILHLVGPNGAGKSTLLARMAG 48 (249)
T ss_dssp EEEEEEETTCEEEEECCTTSSHHHHHHHHTT
T ss_pred eeEEEEcCCCEEEEECCCCCcHHHHHHHHhC
Confidence 4447889999999999999999999998854
No 76
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str}
Probab=94.38 E-value=0.024 Score=53.39 Aligned_cols=31 Identities=23% Similarity=0.276 Sum_probs=27.2
Q ss_pred eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 152 DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 152 D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
|.=+.+-+|+.++|.|++|+|||||+..|+.
T Consensus 38 ~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G 68 (260)
T 2ghi_A 38 SINFFIPSGTTCALVGHTGSGKSTIAKLLYR 68 (260)
T ss_dssp EEEEEECTTCEEEEECSTTSSHHHHHHHHTT
T ss_pred eeEEEECCCCEEEEECCCCCCHHHHHHHHhc
Confidence 3447889999999999999999999998864
No 77
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=94.37 E-value=0.023 Score=50.57 Aligned_cols=40 Identities=15% Similarity=0.185 Sum_probs=24.2
Q ss_pred cceeeeeeeeeeccCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 146 TGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 146 TGiraID~l~pigkGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
++--..+.+.+..+|..++|.|++|+|||||+..|+...+
T Consensus 15 ~~~~~~~~~m~~~~g~~i~l~G~~GsGKSTl~~~L~~~~g 54 (200)
T 4eun_A 15 TENLYFQSMMTGEPTRHVVVMGVSGSGKTTIAHGVADETG 54 (200)
T ss_dssp -------------CCCEEEEECCTTSCHHHHHHHHHHHHC
T ss_pred chhhHHHhhhcCCCCcEEEEECCCCCCHHHHHHHHHHhhC
Confidence 3334455566677899999999999999999999976543
No 78
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A
Probab=94.36 E-value=0.027 Score=56.31 Aligned_cols=36 Identities=14% Similarity=0.231 Sum_probs=30.7
Q ss_pred ceeee-eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 147 GISTI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 147 GiraI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
+..++ |.=+.+.+|+.++|+|++|+|||||+..|+.
T Consensus 15 ~~~~L~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaG 51 (381)
T 3rlf_A 15 EVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAG 51 (381)
T ss_dssp TEEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHT
T ss_pred CEEEEeeeEEEECCCCEEEEEcCCCchHHHHHHHHHc
Confidence 34566 4558999999999999999999999999875
No 79
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=94.35 E-value=0.027 Score=55.72 Aligned_cols=33 Identities=21% Similarity=0.323 Sum_probs=28.8
Q ss_pred ee-eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 150 TI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 150 aI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
++ |.=+.+.+|+.++|+|++|+|||||+..|+.
T Consensus 30 vl~~vsl~i~~Ge~~~llGpnGsGKSTLLr~iaG 63 (355)
T 1z47_A 30 SVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAG 63 (355)
T ss_dssp CEEEEEEEEETTCEEEEECSTTSSHHHHHHHHHT
T ss_pred EEeeeEEEECCCCEEEEECCCCCcHHHHHHHHhC
Confidence 44 4557899999999999999999999999874
No 80
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=94.35 E-value=0.023 Score=51.06 Aligned_cols=28 Identities=14% Similarity=0.165 Sum_probs=24.5
Q ss_pred eccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 157 IARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 157 igkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
..+|+.++|.|++|+|||||+..|+..-
T Consensus 19 ~~~g~~v~I~G~sGsGKSTl~~~l~~~~ 46 (208)
T 3c8u_A 19 QPGRQLVALSGAPGSGKSTLSNPLAAAL 46 (208)
T ss_dssp CCSCEEEEEECCTTSCTHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 4689999999999999999999887653
No 81
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima}
Probab=94.31 E-value=0.028 Score=55.66 Aligned_cols=34 Identities=12% Similarity=0.241 Sum_probs=29.6
Q ss_pred eee-eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 149 STI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 149 raI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
.++ |.=+.+.+|+.++|+|++|+|||||+..|+.
T Consensus 17 ~vl~~vsl~i~~Ge~~~llGpnGsGKSTLLr~iaG 51 (359)
T 2yyz_A 17 KAVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAG 51 (359)
T ss_dssp EEEEEEEEEECTTCEEEEECSTTSSHHHHHHHHHT
T ss_pred EEEeeeEEEEcCCCEEEEEcCCCchHHHHHHHHHC
Confidence 455 4558899999999999999999999999875
No 82
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=94.30 E-value=0.025 Score=53.35 Aligned_cols=33 Identities=12% Similarity=0.207 Sum_probs=28.3
Q ss_pred ee-eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 150 TI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 150 aI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
++ |.=+.+.+|+.++|.|++|+|||||+..|+.
T Consensus 22 vl~~vsl~i~~Ge~~~liG~nGsGKSTLl~~i~G 55 (266)
T 2yz2_A 22 ALENVSLVINEGECLLVAGNTGSGKSTLLQIVAG 55 (266)
T ss_dssp EEEEEEEEECTTCEEEEECSTTSSHHHHHHHHTT
T ss_pred eeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhC
Confidence 45 3448899999999999999999999998853
No 83
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A*
Probab=94.29 E-value=0.029 Score=55.91 Aligned_cols=34 Identities=15% Similarity=0.252 Sum_probs=29.5
Q ss_pred eee-eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 149 STI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 149 raI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
.++ |.=+.+.+|+.++|+|++|+|||||+..|+.
T Consensus 25 ~vl~~vsl~i~~Ge~~~llGpnGsGKSTLLr~iaG 59 (372)
T 1v43_A 25 TAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAG 59 (372)
T ss_dssp EEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHT
T ss_pred EEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHc
Confidence 455 4558899999999999999999999999874
No 84
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=94.27 E-value=0.025 Score=53.06 Aligned_cols=33 Identities=6% Similarity=0.203 Sum_probs=28.2
Q ss_pred ee-eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 150 TI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 150 aI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
++ |.=+.+.+|+.++|.|++|+|||||+..|+.
T Consensus 20 vl~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G 53 (253)
T 2nq2_C 20 LFQQLNFDLNKGDILAVLGQNGCGKSTLLDLLLG 53 (253)
T ss_dssp EEEEEEEEEETTCEEEEECCSSSSHHHHHHHHTT
T ss_pred EEEEEEEEECCCCEEEEECCCCCCHHHHHHHHhC
Confidence 44 3447889999999999999999999998864
No 85
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=94.26 E-value=0.025 Score=49.25 Aligned_cols=29 Identities=10% Similarity=0.295 Sum_probs=25.0
Q ss_pred eeccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 156 SIARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 156 pigkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+.+|+.++|+|++|+|||+|+..++...
T Consensus 34 ~~~~g~~~~l~G~~G~GKTtL~~~i~~~~ 62 (180)
T 3ec2_A 34 NPEEGKGLTFVGSPGVGKTHLAVATLKAI 62 (180)
T ss_dssp CGGGCCEEEECCSSSSSHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 35679999999999999999999887654
No 86
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii}
Probab=94.26 E-value=0.029 Score=55.64 Aligned_cols=34 Identities=15% Similarity=0.307 Sum_probs=29.3
Q ss_pred eee-eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 149 STI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 149 raI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
.++ |.=+.+.+|+.++|+|++|+|||||+..|+.
T Consensus 17 ~vl~~vsl~i~~Ge~~~llGpnGsGKSTLLr~iaG 51 (362)
T 2it1_A 17 TALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAG 51 (362)
T ss_dssp EEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHT
T ss_pred EEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhc
Confidence 345 4558899999999999999999999999875
No 87
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A
Probab=94.21 E-value=0.03 Score=55.69 Aligned_cols=34 Identities=12% Similarity=0.247 Sum_probs=29.6
Q ss_pred eee-eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 149 STI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 149 raI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
.++ |.=+.+.+|+.++|+|++|+|||||+..|+.
T Consensus 17 ~vl~~vsl~i~~Ge~~~llGpnGsGKSTLLr~iaG 51 (372)
T 1g29_1 17 TAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAG 51 (372)
T ss_dssp EEEEEEEEEEETTCEEEEECSTTSSHHHHHHHHHT
T ss_pred EEEeeeEEEEcCCCEEEEECCCCcHHHHHHHHHHc
Confidence 455 4558899999999999999999999999875
No 88
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A*
Probab=94.20 E-value=0.028 Score=49.03 Aligned_cols=26 Identities=15% Similarity=0.171 Sum_probs=23.6
Q ss_pred eeeeccCceeeeecCCCCChhhhHHH
Q 015796 154 MNSIARGQKIPLFSAAGLPHNEIAAQ 179 (400)
Q Consensus 154 l~pigkGqr~~I~g~~G~GKt~L~~~ 179 (400)
=+.+.+|+.++|.|++|+|||||+..
T Consensus 3 sl~i~~gei~~l~G~nGsGKSTl~~~ 28 (171)
T 4gp7_A 3 KLTIPELSLVVLIGSSGSGKSTFAKK 28 (171)
T ss_dssp EEEEESSEEEEEECCTTSCHHHHHHH
T ss_pred cccCCCCEEEEEECCCCCCHHHHHHH
Confidence 35788999999999999999999985
No 89
>2vhj_A Ntpase P4, P4; non- hydrolysable ATP analogue, hydrolase, virus dsRNA, molecular motor, packaging ATPase, hexameric helicase; HET: ADP; 1.80A {Pseudomonas phage PHI12} PDB: 2vhq_A* 1w44_A* 1w46_A* 1w47_A* 1w48_A* 1w49_A* 1w4a_A* 1w4b_A* 1w4c_A 2vht_A* 2vhu_A* 2vhc_A*
Probab=94.07 E-value=0.044 Score=53.69 Aligned_cols=44 Identities=0% Similarity=-0.089 Sum_probs=36.1
Q ss_pred cccccccceeeeeeee-eeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 140 PEEMIQTGISTIDVMN-SIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 140 ~~~~l~TGiraID~l~-pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+...+.||+..+|-++ -+-+|.-+.|.|++|+|||+|+.+++.+
T Consensus 102 i~~~i~TGi~~LD~lLGGi~~gsviLI~GpPGsGKTtLAlqlA~~ 146 (331)
T 2vhj_A 102 LTGELVGCSPVVAEFGGHRYASGMVIVTGKGNSGKTPLVHALGEA 146 (331)
T ss_dssp SSTTCCSBCCEEEEETTEEEESEEEEEECSCSSSHHHHHHHHHHH
T ss_pred hhhccccCcHHHHHHhCCCCCCcEEEEEcCCCCCHHHHHHHHHHh
Confidence 4455779999999876 3447777899999999999999888765
No 90
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A*
Probab=94.05 E-value=0.027 Score=51.90 Aligned_cols=33 Identities=12% Similarity=0.084 Sum_probs=25.1
Q ss_pred eeeeeccCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 153 VMNSIARGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 153 ~l~pigkGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
.-+.+.+|..++|.|++|+|||||+..|+..-+
T Consensus 18 isl~i~~g~iigI~G~~GsGKSTl~k~L~~~lG 50 (245)
T 2jeo_A 18 LYFQSMRPFLIGVSGGTASGKSTVCEKIMELLG 50 (245)
T ss_dssp -----CCSEEEEEECSTTSSHHHHHHHHHHHHT
T ss_pred eeccCCCCEEEEEECCCCCCHHHHHHHHHHHhc
Confidence 346788999999999999999999999876533
No 91
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=94.04 E-value=0.023 Score=51.71 Aligned_cols=29 Identities=21% Similarity=0.225 Sum_probs=20.6
Q ss_pred eeeccCceeeeecCCCCChhhhHHHHH-HH
Q 015796 155 NSIARGQKIPLFSAAGLPHNEIAAQIC-RQ 183 (400)
Q Consensus 155 ~pigkGqr~~I~g~~G~GKt~L~~~i~-~~ 183 (400)
+.+-+|+.++|.|++|+|||||+.+|+ ..
T Consensus 22 l~v~~G~ii~l~Gp~GsGKSTl~~~L~~~~ 51 (231)
T 3lnc_A 22 MLKSVGVILVLSSPSGCGKTTVANKLLEKQ 51 (231)
T ss_dssp CCEECCCEEEEECSCC----CHHHHHHC--
T ss_pred cccCCCCEEEEECCCCCCHHHHHHHHHhcC
Confidence 456789999999999999999999987 54
No 92
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=94.04 E-value=0.098 Score=53.57 Aligned_cols=44 Identities=20% Similarity=0.164 Sum_probs=36.7
Q ss_pred ccccc-ceeeeeeeee-eccCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 142 EMIQT-GISTIDVMNS-IARGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 142 ~~l~T-GiraID~l~p-igkGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
..+.| |+..+|-++- +-+|.=+.|.|++|+|||+|+.+++.+..
T Consensus 222 ~~i~t~G~~~LD~~lgGl~~G~l~li~G~pG~GKT~lal~~a~~~a 267 (503)
T 1q57_A 222 VGLLFSGCTGINDKTLGARGGEVIMVTSGSGMVMSTFVRQQALQWG 267 (503)
T ss_dssp TCSCCSSCTTHHHHHCCCCTTCEEEEEESSCHHHHHHHHHHHHHHT
T ss_pred CCccccchhhhhHhhcccCCCeEEEEeecCCCCchHHHHHHHHHHH
Confidence 35678 9999997753 66888899999999999999999887653
No 93
>3gd7_A Fusion complex of cystic fibrosis transmembrane conductance regulator, residues 1193-1427...; CFTR, ABC transporter, nucleotide binding domain, NBD; HET: B44; 2.70A {Homo sapiens}
Probab=94.00 E-value=0.034 Score=55.69 Aligned_cols=35 Identities=20% Similarity=0.369 Sum_probs=29.6
Q ss_pred eeee-eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 148 ISTI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 148 iraI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
..++ |.=+.+-+|+.++|.|++|+|||||+.+|+.
T Consensus 34 ~~~L~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaG 69 (390)
T 3gd7_A 34 NAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLR 69 (390)
T ss_dssp CCSEEEEEEEECTTCEEEEEESTTSSHHHHHHHHHT
T ss_pred eEEeeceeEEEcCCCEEEEECCCCChHHHHHHHHhC
Confidence 3455 3447899999999999999999999999875
No 94
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=93.99 E-value=0.031 Score=49.35 Aligned_cols=29 Identities=17% Similarity=0.284 Sum_probs=24.2
Q ss_pred eeccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 156 SIARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 156 pigkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+.+|..++|.|++|+|||||+..|+...
T Consensus 2 ~i~~g~~i~l~G~~GsGKSTl~~~L~~~~ 30 (207)
T 2j41_A 2 DNEKGLLIVLSGPSGVGKGTVRKRIFEDP 30 (207)
T ss_dssp --CCCCEEEEECSTTSCHHHHHHHHHHCT
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHhh
Confidence 35689999999999999999999987653
No 95
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Probab=93.98 E-value=0.019 Score=59.46 Aligned_cols=39 Identities=15% Similarity=0.239 Sum_probs=34.2
Q ss_pred cccccceeeee-eee-eeccCceeeeecCCCCChhhhHHHH
Q 015796 142 EMIQTGISTID-VMN-SIARGQKIPLFSAAGLPHNEIAAQI 180 (400)
Q Consensus 142 ~~l~TGiraID-~l~-pigkGqr~~I~g~~G~GKt~L~~~i 180 (400)
+.+.||+.++| ..+ .+-+|+.++|.|++|+|||||+.++
T Consensus 19 ~~~~~g~~~Ld~i~~G~i~~Ge~~~l~G~nGsGKSTL~~~~ 59 (525)
T 1tf7_A 19 AKMRTMIEGFDDISHGGLPIGRSTLVSGTSGTGKTLFSIQF 59 (525)
T ss_dssp CEECCCCTTHHHHTTSSEETTSEEEEEESTTSSHHHHHHHH
T ss_pred ccccCCchhHHHhcCCCCCCCeEEEEEcCCCCCHHHHHHHH
Confidence 45788999997 446 7999999999999999999999885
No 96
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=93.96 E-value=0.027 Score=50.39 Aligned_cols=25 Identities=8% Similarity=0.211 Sum_probs=21.4
Q ss_pred cCceeeeecCCCCChhhhHHHHHHH
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+|+.++|.|++|+|||||+..|.+.
T Consensus 3 ~g~~i~lvGpsGaGKSTLl~~L~~~ 27 (198)
T 1lvg_A 3 GPRPVVLSGPSGAGKSTLLKKLFQE 27 (198)
T ss_dssp --CCEEEECCTTSSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhh
Confidence 6889999999999999999998764
No 97
>2v9p_A Replication protein E1; AAA+ molecular motor, DNA replication, DNA translocation, nucleotide-binding, DNA-binding; 3.00A {Bovine papillomavirus type 1} PDB: 2gxa_A*
Probab=93.95 E-value=0.019 Score=55.69 Aligned_cols=32 Identities=3% Similarity=0.088 Sum_probs=28.3
Q ss_pred eeeeeeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 152 DVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 152 D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|.-+.+-+|++++|.|++|+|||||+..|++.
T Consensus 118 ~vsl~i~~Ge~vaIvGpsGsGKSTLl~lL~gl 149 (305)
T 2v9p_A 118 LWLKGIPKKNCLAFIGPPNTGKSMLCNSLIHF 149 (305)
T ss_dssp HHHHTCTTCSEEEEECSSSSSHHHHHHHHHHH
T ss_pred cceEEecCCCEEEEECCCCCcHHHHHHHHhhh
Confidence 34578999999999999999999999988765
No 98
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=93.93 E-value=0.033 Score=48.82 Aligned_cols=25 Identities=16% Similarity=0.299 Sum_probs=22.7
Q ss_pred cCceeeeecCCCCChhhhHHHHHHH
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+|..++|.|++|+|||||+..|.+.
T Consensus 4 ~g~~i~i~GpsGsGKSTL~~~L~~~ 28 (180)
T 1kgd_A 4 MRKTLVLLGAHGVGRRHIKNTLITK 28 (180)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhh
Confidence 6888999999999999999998765
No 99
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=93.93 E-value=0.04 Score=49.28 Aligned_cols=28 Identities=18% Similarity=0.229 Sum_probs=24.2
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
.+++.+.|.|++|+|||+|+..+++...
T Consensus 50 ~~~~~~ll~G~~G~GKT~la~~l~~~~~ 77 (242)
T 3bos_A 50 DGVQAIYLWGPVKSGRTHLIHAACARAN 77 (242)
T ss_dssp CSCSEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 3678899999999999999999887654
No 100
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12
Probab=93.92 E-value=0.025 Score=55.79 Aligned_cols=31 Identities=10% Similarity=0.194 Sum_probs=27.8
Q ss_pred eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 152 DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 152 D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
|.=+.+.+|+.++|+|++|+|||||+..|+.
T Consensus 18 ~vsl~i~~Ge~~~llGpnGsGKSTLLr~iaG 48 (348)
T 3d31_A 18 NLSLKVESGEYFVILGPTGAGKTLFLELIAG 48 (348)
T ss_dssp EEEEEECTTCEEEEECCCTHHHHHHHHHHHT
T ss_pred eeEEEEcCCCEEEEECCCCccHHHHHHHHHc
Confidence 4557899999999999999999999999874
No 101
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=93.79 E-value=0.041 Score=54.70 Aligned_cols=35 Identities=17% Similarity=0.252 Sum_probs=30.3
Q ss_pred eeee-eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 148 ISTI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 148 iraI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
+.++ |.=+.+.+|+.++|.|++|+|||||+..|+.
T Consensus 41 ~~aL~~vsl~i~~Gei~~IiGpnGaGKSTLlr~i~G 76 (366)
T 3tui_C 41 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNL 76 (366)
T ss_dssp EEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHT
T ss_pred eEEEEeeEEEEcCCCEEEEEcCCCchHHHHHHHHhc
Confidence 5566 4558999999999999999999999998864
No 102
>2bbs_A Cystic fibrosis transmembrane conductance regulator; ATP binding cassette, transport protein; HET: ATP; 2.05A {Homo sapiens} PDB: 2bbt_A* 1xmi_A* 1xmj_A* 2bbo_A* 3si7_A* 1r0w_A 1q3h_A 1r0x_A* 1r0y_A* 1r0z_A* 1r10_A* 1xf9_A* 1xfa_A*
Probab=93.74 E-value=0.036 Score=53.18 Aligned_cols=32 Identities=22% Similarity=0.335 Sum_probs=27.7
Q ss_pred eeeeeeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 152 DVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 152 D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|.=+.+-+|+.++|.|++|+|||||+..|+..
T Consensus 56 ~isl~i~~Ge~~~i~G~NGsGKSTLlk~l~Gl 87 (290)
T 2bbs_A 56 DINFKIERGQLLAVAGSTGAGKTSLLMMIMGE 87 (290)
T ss_dssp EEEEEECTTCEEEEEESTTSSHHHHHHHHTTS
T ss_pred eeEEEEcCCCEEEEECCCCCcHHHHHHHHhcC
Confidence 34478899999999999999999999988643
No 103
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=93.65 E-value=0.035 Score=49.45 Aligned_cols=27 Identities=11% Similarity=0.142 Sum_probs=23.1
Q ss_pred eccCceeeeecCCCCChhhhHHHHHHH
Q 015796 157 IARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 157 igkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
.-+|..++|.|++|+|||||+..|+..
T Consensus 3 ~~~~~~i~i~G~~GsGKSTl~~~l~~~ 29 (211)
T 3asz_A 3 APKPFVIGIAGGTASGKTTLAQALART 29 (211)
T ss_dssp --CCEEEEEEESTTSSHHHHHHHHHHH
T ss_pred CCCcEEEEEECCCCCCHHHHHHHHHHH
Confidence 357889999999999999999998765
No 104
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=93.63 E-value=0.04 Score=49.00 Aligned_cols=31 Identities=13% Similarity=0.067 Sum_probs=24.4
Q ss_pred eeeccCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 155 NSIARGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 155 ~pigkGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
+.+.+|..+.|.|++|+||||++..+++.-+
T Consensus 20 ~~~~~~~~i~l~G~~GsGKsTl~~~La~~l~ 50 (199)
T 3vaa_A 20 FQSNAMVRIFLTGYMGAGKTTLGKAFARKLN 50 (199)
T ss_dssp ----CCCEEEEECCTTSCHHHHHHHHHHHHT
T ss_pred EecCCCCEEEEEcCCCCCHHHHHHHHHHHcC
Confidence 4567899999999999999999999987644
No 105
>2pjz_A Hypothetical protein ST1066; ATP binding protein, structural genomics, NPPSFA; 1.90A {Sulfolobus tokodaii}
Probab=93.55 E-value=0.042 Score=51.96 Aligned_cols=29 Identities=14% Similarity=0.299 Sum_probs=25.6
Q ss_pred eeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 153 VMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 153 ~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
.=+.+- |+.++|.|++|+|||||+..|+.
T Consensus 24 vsl~i~-Ge~~~i~G~NGsGKSTLlk~l~G 52 (263)
T 2pjz_A 24 INLEVN-GEKVIILGPNGSGKTTLLRAISG 52 (263)
T ss_dssp EEEEEC-SSEEEEECCTTSSHHHHHHHHTT
T ss_pred eeEEEC-CEEEEEECCCCCCHHHHHHHHhC
Confidence 447788 99999999999999999999864
No 106
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A*
Probab=93.53 E-value=0.026 Score=55.74 Aligned_cols=33 Identities=15% Similarity=0.328 Sum_probs=28.8
Q ss_pred ee-eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 150 TI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 150 aI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
++ |.=+.+.+|+.++|+|++|+|||||+..|+.
T Consensus 20 vl~~vsl~i~~Ge~~~llGpnGsGKSTLLr~iaG 53 (353)
T 1oxx_K 20 ALDNVNINIENGERFGILGPSGAGKTTFMRIIAG 53 (353)
T ss_dssp EEEEEEEEECTTCEEEEECSCHHHHHHHHHHHHT
T ss_pred eEeceEEEECCCCEEEEECCCCCcHHHHHHHHhC
Confidence 45 4558899999999999999999999999875
No 107
>3nh6_A ATP-binding cassette SUB-family B member 6, mitoc; ABC-transporter, ABCB6, nucleotide binding domain, heme BIOS transport protein; 2.00A {Homo sapiens} PDB: 3nh9_A* 3nha_A* 3nhb_A*
Probab=93.46 E-value=0.026 Score=54.68 Aligned_cols=36 Identities=25% Similarity=0.353 Sum_probs=30.0
Q ss_pred eeee-eeeeeeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 148 ISTI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 148 iraI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
..++ |.=+.+-+|++++|.|++|+|||||++.|++.
T Consensus 67 ~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~gl 103 (306)
T 3nh6_A 67 RETLQDVSFTVMPGQTLALVGPSGAGKSTILRLLFRF 103 (306)
T ss_dssp CEEEEEEEEEECTTCEEEEESSSCHHHHHHHHHHTTS
T ss_pred CceeeeeeEEEcCCCEEEEECCCCchHHHHHHHHHcC
Confidence 3455 44589999999999999999999999988653
No 108
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11
Probab=93.40 E-value=0.04 Score=49.39 Aligned_cols=25 Identities=8% Similarity=0.165 Sum_probs=22.2
Q ss_pred CceeeeecCCCCChhhhHHHHHHHh
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
|++++|.|++|+|||||++.|+..-
T Consensus 1 G~~i~i~G~nG~GKTTll~~l~g~~ 25 (189)
T 2i3b_A 1 ARHVFLTGPPGVGKTTLIHKASEVL 25 (189)
T ss_dssp CCCEEEESCCSSCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCChHHHHHHHHHhhc
Confidence 7899999999999999999887653
No 109
>3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032}
Probab=93.26 E-value=0.04 Score=50.16 Aligned_cols=27 Identities=19% Similarity=0.083 Sum_probs=24.5
Q ss_pred eccCceeeeecCCCCChhhhHHHHHHH
Q 015796 157 IARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 157 igkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+-+|+.++|.|++|+|||||+..|+..
T Consensus 19 i~~Ge~~~liG~nGsGKSTLl~~l~Gl 45 (208)
T 3b85_A 19 IDTNTIVFGLGPAGSGKTYLAMAKAVQ 45 (208)
T ss_dssp HHHCSEEEEECCTTSSTTHHHHHHHHH
T ss_pred ccCCCEEEEECCCCCCHHHHHHHHhcC
Confidence 479999999999999999999988765
No 110
>2a5y_B CED-4; apoptosis; HET: ATP; 2.60A {Caenorhabditis elegans} SCOP: a.4.5.80 a.77.1.3 c.37.1.20 PDB: 3lqq_A* 3lqr_A*
Probab=93.12 E-value=0.18 Score=52.09 Aligned_cols=22 Identities=27% Similarity=0.144 Sum_probs=19.5
Q ss_pred ceeeeecCCCCChhhhHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~ 182 (400)
.-++|.|..|+|||||+.++++
T Consensus 153 ~vv~I~G~gGvGKTtLA~~v~~ 174 (549)
T 2a5y_B 153 FFLFLHGRAGSGKSVIASQALS 174 (549)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred eEEEEEcCCCCCHHHHHHHHHH
Confidence 4589999999999999998875
No 111
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12
Probab=92.73 E-value=0.077 Score=49.32 Aligned_cols=30 Identities=17% Similarity=0.176 Sum_probs=26.1
Q ss_pred eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 152 DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 152 D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
|.=+.+.+ +.++|.|++|+|||||+..|+.
T Consensus 17 ~isl~i~~-e~~~liG~nGsGKSTLl~~l~G 46 (240)
T 2onk_A 17 NVDFEMGR-DYCVLLGPTGAGKSVFLELIAG 46 (240)
T ss_dssp EEEEEECS-SEEEEECCTTSSHHHHHHHHHT
T ss_pred eeEEEECC-EEEEEECCCCCCHHHHHHHHhC
Confidence 34477889 9999999999999999999864
No 112
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=92.67 E-value=0.072 Score=46.72 Aligned_cols=28 Identities=18% Similarity=0.298 Sum_probs=25.0
Q ss_pred eeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 156 SIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 156 pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+..+|.+++|.|++|+||||+...+++.
T Consensus 6 ~~~~~~~I~l~G~~GsGKSTv~~~La~~ 33 (184)
T 1y63_A 6 EQPKGINILITGTPGTGKTSMAEMIAAE 33 (184)
T ss_dssp CCCSSCEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHh
Confidence 4567889999999999999999999876
No 113
>3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae}
Probab=92.60 E-value=0.39 Score=46.65 Aligned_cols=97 Identities=5% Similarity=-0.026 Sum_probs=58.6
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccc---hHHHHHHHHHhhhcCCCcc
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVN---METAQFFKRDFEENGSMER 234 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer---~e~~~~~~~~l~~~g~l~~ 234 (400)
+++..+.|.|++|+|||+++..+++...... + +..-..+..|++-|=+- ......+++.+.... .
T Consensus 43 ~~~~~lli~GpPGTGKT~~v~~v~~~L~~~~-----~----~~~~~~~~~v~INc~~~~t~~~~~~~I~~~L~g~~---~ 110 (318)
T 3te6_A 43 SQNKLFYITNADDSTKFQLVNDVMDELITSS-----A----RKELPIFDYIHIDALELAGMDALYEKIWFAISKEN---L 110 (318)
T ss_dssp TCCCEEEEECCCSHHHHHHHHHHHHHHHHTT-----T----TTSSCCEEEEEEETTCCC--HHHHHHHHHHHSCCC----
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHHHHHh-----h----hccCCceEEEEEeccccCCHHHHHHHHHHHhcCCC---C
Confidence 5778899999999999999988887654211 0 00011345666665442 355666777774321 0
Q ss_pred EEEEEeCCCCCHHHHHhHHHHHHHHHHHhhh---hCCCeEEEEEcchhhHH
Q 015796 235 VTLFLNLANDPTIERIITPRIALTTAEYLAY---ECGKHVLVILTDMSSYA 282 (400)
Q Consensus 235 t~vv~~t~~~~~~~r~~a~~~a~tiAEyfr~---d~G~~Vlli~Dsltr~a 282 (400)
+...+ .-.+-++|.. .+++.+++++|.+-++.
T Consensus 111 ------~~~~~----------~~~L~~~f~~~~~~~~~~~ii~lDE~d~l~ 145 (318)
T 3te6_A 111 ------CGDIS----------LEALNFYITNVPKAKKRKTLILIQNPENLL 145 (318)
T ss_dssp -------CCCC----------HHHHHHHHHHSCGGGSCEEEEEEECCSSSC
T ss_pred ------CchHH----------HHHHHHHHHHhhhccCCceEEEEecHHHhh
Confidence 11111 1233455542 35788999999998776
No 114
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11
Probab=92.54 E-value=0.069 Score=47.23 Aligned_cols=24 Identities=17% Similarity=0.299 Sum_probs=21.0
Q ss_pred ceeeeecCCCCChhhhHHHHHHHh
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+++|.|++|+|||||+..|+..-
T Consensus 1 ~~i~l~G~nGsGKTTLl~~l~g~l 24 (178)
T 1ye8_A 1 MKIIITGEPGVGKTTLVKKIVERL 24 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHh
Confidence 368999999999999999988664
No 115
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2
Probab=92.52 E-value=0.068 Score=45.79 Aligned_cols=26 Identities=23% Similarity=0.309 Sum_probs=22.5
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHh
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.|..++|.|++|+|||||+..++..-
T Consensus 3 ~~~~i~l~G~~GsGKSTl~~~La~~l 28 (173)
T 1kag_A 3 EKRNIFLVGPMGAGKSTIGRQLAQQL 28 (173)
T ss_dssp CCCCEEEECCTTSCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHh
Confidence 36789999999999999999987653
No 116
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=92.47 E-value=0.056 Score=48.09 Aligned_cols=29 Identities=7% Similarity=0.042 Sum_probs=25.2
Q ss_pred eeeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 155 NSIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 155 ~pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
..+.+|..++|.|++|+||||++..|++.
T Consensus 16 ~~~~~~~~i~i~G~~GsGKSTl~~~L~~~ 44 (207)
T 2qt1_A 16 PRGSKTFIIGISGVTNSGKTTLAKNLQKH 44 (207)
T ss_dssp CCSCCCEEEEEEESTTSSHHHHHHHHHTT
T ss_pred ccCCCCeEEEEECCCCCCHHHHHHHHHHh
Confidence 35677889999999999999999998764
No 117
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=92.45 E-value=0.075 Score=45.78 Aligned_cols=28 Identities=14% Similarity=0.220 Sum_probs=23.8
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
-+|..++|.|++|+||||++..++..-+
T Consensus 6 ~~g~~i~l~G~~GsGKSTl~~~l~~~~g 33 (175)
T 1knq_A 6 HDHHIYVLMGVSGSGKSAVASEVAHQLH 33 (175)
T ss_dssp TTSEEEEEECSTTSCHHHHHHHHHHHHT
T ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHhhC
Confidence 3578899999999999999999876543
No 118
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=92.45 E-value=0.077 Score=48.11 Aligned_cols=29 Identities=17% Similarity=0.243 Sum_probs=24.3
Q ss_pred eeeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 155 NSIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 155 ~pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
.|..+|..+.|.|++|+|||||+..|.+.
T Consensus 14 ~~~~~g~~ivl~GPSGaGKsTL~~~L~~~ 42 (197)
T 3ney_A 14 LYFQGRKTLVLIGASGVGRSHIKNALLSQ 42 (197)
T ss_dssp --CCSCCEEEEECCTTSSHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECcCCCCHHHHHHHHHhh
Confidence 35568999999999999999999998765
No 119
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=92.44 E-value=0.067 Score=47.01 Aligned_cols=25 Identities=8% Similarity=0.189 Sum_probs=21.1
Q ss_pred CceeeeecCCCCChhhhHHHHHHHh
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
|.-++|.|++|+|||||+.+|+...
T Consensus 1 ~~ii~l~GpsGaGKsTl~~~L~~~~ 25 (186)
T 3a00_A 1 SRPIVISGPSGTGKSTLLKKLFAEY 25 (186)
T ss_dssp CCCEEEESSSSSSHHHHHHHHHHHC
T ss_pred CCEEEEECCCCCCHHHHHHHHHhhC
Confidence 4567999999999999999987653
No 120
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=92.44 E-value=0.07 Score=48.86 Aligned_cols=27 Identities=11% Similarity=0.251 Sum_probs=22.8
Q ss_pred eccCceeeeecCCCCChhhhHHHHHHH
Q 015796 157 IARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 157 igkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+-+|+.++|.|++|+|||||+..|+..
T Consensus 13 ~~~G~ii~l~GpsGsGKSTLlk~L~g~ 39 (219)
T 1s96_A 13 MAQGTLYIVSAPSGAGKSSLIQALLKT 39 (219)
T ss_dssp --CCCEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCCCCHHHHHHHHhcc
Confidence 457899999999999999999988754
No 121
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A*
Probab=92.35 E-value=1.1 Score=40.37 Aligned_cols=22 Identities=9% Similarity=0.273 Sum_probs=18.5
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
++.|+|++|+||+|.+..|++.
T Consensus 2 ~Iil~GpPGsGKgTqa~~La~~ 23 (206)
T 3sr0_A 2 ILVFLGPPGAGKGTQAKRLAKE 23 (206)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHH
Confidence 4789999999999998877654
No 122
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=92.34 E-value=0.079 Score=45.38 Aligned_cols=26 Identities=23% Similarity=0.295 Sum_probs=23.8
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHh
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+|+.++|.|++|+|||+|+..+++..
T Consensus 35 ~g~~~~l~G~~G~GKTtL~~~i~~~~ 60 (149)
T 2kjq_A 35 HGQFIYVWGEEGAGKSHLLQAWVAQA 60 (149)
T ss_dssp CCSEEEEESSSTTTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 89999999999999999999987654
No 123
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=92.07 E-value=0.075 Score=51.42 Aligned_cols=28 Identities=7% Similarity=-0.073 Sum_probs=24.9
Q ss_pred eeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 156 SIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 156 pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
.+.+|..++|.|++|+|||||+..|+..
T Consensus 86 ~~~~g~ivgI~G~sGsGKSTL~~~L~gl 113 (312)
T 3aez_A 86 DRPVPFIIGVAGSVAVGKSTTARVLQAL 113 (312)
T ss_dssp SSCCCEEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCCCCEEEEEECCCCchHHHHHHHHHhh
Confidence 3788999999999999999999988654
No 124
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A*
Probab=91.92 E-value=0.13 Score=49.11 Aligned_cols=26 Identities=12% Similarity=0.151 Sum_probs=22.3
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHh
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+.-+.|.|++|+|||+|+..+++..
T Consensus 36 ~~~~lll~G~~GtGKT~la~~i~~~~ 61 (324)
T 1l8q_A 36 LYNPIFIYGSVGTGKTHLLQAAGNEA 61 (324)
T ss_dssp SCSSEEEECSSSSSHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHH
Confidence 45678999999999999999988765
No 125
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=91.88 E-value=0.094 Score=46.55 Aligned_cols=27 Identities=15% Similarity=0.175 Sum_probs=23.7
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+|..+.|.|++|+|||||+..|+..-
T Consensus 23 ~~g~~i~l~G~sGsGKSTl~~~La~~l 49 (200)
T 3uie_A 23 QKGCVIWVTGLSGSGKSTLACALNQML 49 (200)
T ss_dssp SCCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 578899999999999999999987654
No 126
>1pui_A ENGB, probable GTP-binding protein ENGB; structural genomics, nysgxrc T16, GTPase, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.37.1.8
Probab=91.78 E-value=0.045 Score=48.24 Aligned_cols=32 Identities=6% Similarity=0.069 Sum_probs=27.1
Q ss_pred eeeeeeeeeccCceeeeecCCCCChhhhHHHHH
Q 015796 149 STIDVMNSIARGQKIPLFSAAGLPHNEIAAQIC 181 (400)
Q Consensus 149 raID~l~pigkGqr~~I~g~~G~GKt~L~~~i~ 181 (400)
.+++- +++.+|.+++|.|++|+|||||+..++
T Consensus 16 ~~l~~-~~~~~~~~v~lvG~~g~GKSTLl~~l~ 47 (210)
T 1pui_A 16 PDIRH-LPSDTGIEVAFAGRSNAGKSSALNTLT 47 (210)
T ss_dssp SSGGG-SSCSCSEEEEEEECTTSSHHHHHTTTC
T ss_pred CCHhH-CCCCCCcEEEEECCCCCCHHHHHHHHh
Confidence 34544 889999999999999999999987764
No 127
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli}
Probab=91.77 E-value=0.54 Score=47.64 Aligned_cols=25 Identities=24% Similarity=0.381 Sum_probs=21.8
Q ss_pred ceeeeecCCCCChhhhHHHHHHHhc
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
.-++|.|++|+|||+|+..|++..+
T Consensus 51 ~~vLL~GppGtGKTtlAr~ia~~~~ 75 (447)
T 3pvs_A 51 HSMILWGPPGTGKTTLAEVIARYAN 75 (447)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHTT
T ss_pred cEEEEECCCCCcHHHHHHHHHHHhC
Confidence 4589999999999999999987754
No 128
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus}
Probab=91.68 E-value=0.1 Score=49.15 Aligned_cols=27 Identities=11% Similarity=0.012 Sum_probs=24.7
Q ss_pred eccCceeeeecCCCCChhhhHHHHHHH
Q 015796 157 IARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 157 igkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+-+|+.++|.|++|+|||||+..|++.
T Consensus 22 i~~g~~v~i~Gp~GsGKSTll~~l~g~ 48 (261)
T 2eyu_A 22 HRKMGLILVTGPTGSGKSTTIASMIDY 48 (261)
T ss_dssp GCSSEEEEEECSTTCSHHHHHHHHHHH
T ss_pred hCCCCEEEEECCCCccHHHHHHHHHHh
Confidence 789999999999999999999888764
No 129
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A*
Probab=91.68 E-value=0.11 Score=46.67 Aligned_cols=25 Identities=8% Similarity=0.165 Sum_probs=21.9
Q ss_pred CceeeeecCCCCChhhhHHHHHHHh
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+.+++|.|++|+||||+++.+++.-
T Consensus 5 ~~~i~i~G~~GsGKSTl~~~L~~~~ 29 (227)
T 1cke_A 5 APVITIDGPSGAGKGTLCKAMAEAL 29 (227)
T ss_dssp SCEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHh
Confidence 5689999999999999999987643
No 130
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=91.66 E-value=0.1 Score=46.87 Aligned_cols=27 Identities=19% Similarity=0.359 Sum_probs=23.5
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
-+|.-++|.|++|+|||||+..|+..-
T Consensus 6 ~~g~~i~l~GpsGsGKsTl~~~L~~~~ 32 (208)
T 3tau_A 6 ERGLLIVLSGPSGVGKGTVREAVFKDP 32 (208)
T ss_dssp CCCCEEEEECCTTSCHHHHHHHHHHST
T ss_pred CCCcEEEEECcCCCCHHHHHHHHHhhC
Confidence 368889999999999999999987653
No 131
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus}
Probab=91.59 E-value=0.1 Score=54.26 Aligned_cols=33 Identities=6% Similarity=0.155 Sum_probs=28.0
Q ss_pred eeeeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 150 TIDVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 150 aID~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
+++.+..+.+|++++|.|++|+|||||++.|+.
T Consensus 37 ~l~~vs~i~~Ge~~~LvG~NGaGKSTLlk~l~G 69 (538)
T 1yqt_A 37 VLYRLPVVKEGMVVGIVGPNGTGKSTAVKILAG 69 (538)
T ss_dssp EEECCCCCCTTSEEEEECCTTSSHHHHHHHHHT
T ss_pred cccCcCcCCCCCEEEEECCCCCCHHHHHHHHhC
Confidence 454444689999999999999999999999864
No 132
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25
Probab=91.50 E-value=0.09 Score=45.95 Aligned_cols=24 Identities=13% Similarity=0.187 Sum_probs=21.0
Q ss_pred CceeeeecCCCCChhhhHHHHHHH
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.|++|+|||||+..|+..
T Consensus 2 g~ii~l~G~~GaGKSTl~~~L~~~ 25 (189)
T 2bdt_A 2 KKLYIITGPAGVGKSTTCKRLAAQ 25 (189)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHH
T ss_pred CeEEEEECCCCCcHHHHHHHHhcc
Confidence 567899999999999999998753
No 133
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=91.48 E-value=0.069 Score=52.35 Aligned_cols=30 Identities=0% Similarity=0.104 Sum_probs=25.7
Q ss_pred eeecc--CceeeeecCCCCChhhhHHHHHHHh
Q 015796 155 NSIAR--GQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 155 ~pigk--Gqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
..+.+ |++++|.|++|+|||||+..|+..-
T Consensus 163 ~~v~~~lg~k~~IvG~nGsGKSTLlk~L~gl~ 194 (365)
T 1lw7_A 163 KEARPFFAKTVAILGGESSGKSVLVNKLAAVF 194 (365)
T ss_dssp TTTGGGTCEEEEEECCTTSHHHHHHHHHHHHT
T ss_pred HHHHHhhhCeEEEECCCCCCHHHHHHHHHHHh
Confidence 34566 9999999999999999999988754
No 134
>1t9h_A YLOQ, probable GTPase ENGC; N-terminal beta-barrel domain with oligonucleotide binding fold, central GTP binding domain; 1.60A {Bacillus subtilis} SCOP: b.40.4.5 c.37.1.8
Probab=91.42 E-value=0.03 Score=54.35 Aligned_cols=31 Identities=6% Similarity=0.117 Sum_probs=27.9
Q ss_pred eeeeeeeccCceeeeecCCCCChhhhHHHHH
Q 015796 151 IDVMNSIARGQKIPLFSAAGLPHNEIAAQIC 181 (400)
Q Consensus 151 ID~l~pigkGqr~~I~g~~G~GKt~L~~~i~ 181 (400)
+|.|+++-+|+.++|.|++|+|||||+..|.
T Consensus 164 ~~~L~~~~~G~~~~lvG~sG~GKSTLln~L~ 194 (307)
T 1t9h_A 164 LADIIPHFQDKTTVFAGQSGVGKSSLLNAIS 194 (307)
T ss_dssp CTTTGGGGTTSEEEEEESHHHHHHHHHHHHC
T ss_pred HHHHHhhcCCCEEEEECCCCCCHHHHHHHhc
Confidence 5667888999999999999999999998874
No 135
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A*
Probab=91.41 E-value=0.099 Score=50.13 Aligned_cols=28 Identities=7% Similarity=-0.038 Sum_probs=24.4
Q ss_pred eeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 156 SIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 156 pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+..+|..++|.|++|+|||||+..|+..
T Consensus 76 ~~~~g~iigI~G~~GsGKSTl~~~L~~~ 103 (308)
T 1sq5_A 76 GQRIPYIISIAGSVAVGKSTTARVLQAL 103 (308)
T ss_dssp -CCCCEEEEEEECTTSSHHHHHHHHHHH
T ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHH
Confidence 4488999999999999999999998764
No 136
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A
Probab=91.38 E-value=0.11 Score=47.55 Aligned_cols=27 Identities=11% Similarity=0.277 Sum_probs=23.3
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
++..++|.|++|+|||||+..|++.-+
T Consensus 26 ~~~~i~l~G~~GsGKSTl~k~La~~lg 52 (246)
T 2bbw_A 26 KLLRAVILGPPGSGKGTVCQRIAQNFG 52 (246)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHHHC
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHhC
Confidence 468999999999999999999986543
No 137
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens}
Probab=91.33 E-value=0.096 Score=49.45 Aligned_cols=28 Identities=18% Similarity=0.334 Sum_probs=23.2
Q ss_pred eeccCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 156 SIARGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 156 pigkGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
.+.+| +++.|++|+|||+|+..|+...+
T Consensus 42 ~~~~G--vlL~Gp~GtGKTtLakala~~~~ 69 (274)
T 2x8a_A 42 VTPAG--VLLAGPPGCGKTLLAKAVANESG 69 (274)
T ss_dssp CCCSE--EEEESSTTSCHHHHHHHHHHHTT
T ss_pred CCCCe--EEEECCCCCcHHHHHHHHHHHcC
Confidence 34566 99999999999999999886643
No 138
>2yv5_A YJEQ protein; hydrolase, GTPase, permutation, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GDP; 1.90A {Aquifex aeolicus}
Probab=91.33 E-value=0.056 Score=51.89 Aligned_cols=32 Identities=19% Similarity=0.243 Sum_probs=29.0
Q ss_pred eeeeeeeeccCceeeeecCCCCChhhhHHHHH
Q 015796 150 TIDVMNSIARGQKIPLFSAAGLPHNEIAAQIC 181 (400)
Q Consensus 150 aID~l~pigkGqr~~I~g~~G~GKt~L~~~i~ 181 (400)
.||-|+.+-+|+..++.|++|+|||||+..|.
T Consensus 155 gi~~L~~~l~G~i~~l~G~sG~GKSTLln~l~ 186 (302)
T 2yv5_A 155 GIDELVDYLEGFICILAGPSGVGKSSILSRLT 186 (302)
T ss_dssp THHHHHHHTTTCEEEEECSTTSSHHHHHHHHH
T ss_pred CHHHHHhhccCcEEEEECCCCCCHHHHHHHHH
Confidence 46778888899999999999999999999987
No 139
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=91.28 E-value=0.11 Score=54.83 Aligned_cols=33 Identities=12% Similarity=0.218 Sum_probs=28.4
Q ss_pred eeeeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 150 TIDVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 150 aID~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
.++.+..+.+|+.++|.|++|+|||||+..|+.
T Consensus 93 ~l~~l~~~~~Gei~~LvGpNGaGKSTLLkiL~G 125 (608)
T 3j16_B 93 KLHRLPTPRPGQVLGLVGTNGIGKSTALKILAG 125 (608)
T ss_dssp EEECCCCCCTTSEEEEECCTTSSHHHHHHHHHT
T ss_pred eecCCCCCCCCCEEEEECCCCChHHHHHHHHhc
Confidence 455555788999999999999999999999864
No 140
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=91.26 E-value=0.11 Score=46.15 Aligned_cols=28 Identities=11% Similarity=0.236 Sum_probs=24.6
Q ss_pred eccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 157 IARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 157 igkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+.+|.-+.|.|++|+|||||+..++..-
T Consensus 9 ~~~~~~i~l~G~sGsGKsTl~~~L~~~~ 36 (204)
T 2qor_A 9 MARIPPLVVCGPSGVGKGTLIKKVLSEF 36 (204)
T ss_dssp CCCCCCEEEECCTTSCHHHHHHHHHHHC
T ss_pred cccCCEEEEECCCCCCHHHHHHHHHHhC
Confidence 5688889999999999999999987653
No 141
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=91.21 E-value=0.11 Score=45.08 Aligned_cols=26 Identities=15% Similarity=0.328 Sum_probs=22.8
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHh
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+|..+.+.|++|+||||++..+++.-
T Consensus 3 ~g~~I~l~G~~GsGKST~~~~La~~l 28 (186)
T 3cm0_A 3 VGQAVIFLGPPGAGKGTQASRLAQEL 28 (186)
T ss_dssp CEEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHh
Confidence 57789999999999999999987643
No 142
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=91.20 E-value=1.4 Score=42.53 Aligned_cols=30 Identities=13% Similarity=0.011 Sum_probs=25.3
Q ss_pred eeeccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 155 NSIARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 155 ~pigkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+...+|+.+++.|+.|+||||++..|+..-
T Consensus 100 ~~~~~~~vI~ivG~~G~GKTT~~~~LA~~l 129 (320)
T 1zu4_A 100 FKENRLNIFMLVGVNGTGKTTSLAKMANYY 129 (320)
T ss_dssp CCTTSCEEEEEESSTTSSHHHHHHHHHHHH
T ss_pred ccCCCCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 346788999999999999999998887543
No 143
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=91.20 E-value=0.11 Score=49.93 Aligned_cols=30 Identities=7% Similarity=0.075 Sum_probs=26.1
Q ss_pred eeeccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 155 NSIARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 155 ~pigkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+.+.+|+.+++.|+.|+||||++..|+..-
T Consensus 95 ~~~~~g~vi~lvG~nGsGKTTll~~Lag~l 124 (302)
T 3b9q_A 95 LGFRKPAVIMIVGVNGGGKTTSLGKLAHRL 124 (302)
T ss_dssp CCSSSCEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred cccCCCcEEEEEcCCCCCHHHHHHHHHHHH
Confidence 357899999999999999999999987653
No 144
>2npi_A Protein CLP1; CLP1-PCF11 complex, ATP binding, ternary complex, transcript; HET: ATP; 2.95A {Saccharomyces cerevisiae}
Probab=91.16 E-value=0.083 Score=53.99 Aligned_cols=31 Identities=10% Similarity=0.272 Sum_probs=26.6
Q ss_pred eeeeeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 153 VMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 153 ~l~pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
.=+.+-+|++++|.|++|+|||||+..|+..
T Consensus 131 vsl~i~~Ge~v~IvGpnGsGKSTLlr~L~Gl 161 (460)
T 2npi_A 131 IRMSNFEGPRVVIVGGSQTGKTSLSRTLCSY 161 (460)
T ss_dssp HHHHSSSCCCEEEEESTTSSHHHHHHHHHHT
T ss_pred CceEeCCCCEEEEECCCCCCHHHHHHHHhCc
Confidence 3355679999999999999999999998764
No 145
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A*
Probab=91.13 E-value=0.11 Score=47.83 Aligned_cols=27 Identities=22% Similarity=0.479 Sum_probs=22.6
Q ss_pred eeccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 156 SIARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 156 pigkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+.+| ++|.|++|+|||+|+..|+...
T Consensus 47 ~~~~g--~ll~G~~G~GKTtl~~~i~~~~ 73 (254)
T 1ixz_A 47 RIPKG--VLLVGPPGVGKTHLARAVAGEA 73 (254)
T ss_dssp CCCSE--EEEECCTTSSHHHHHHHHHHHT
T ss_pred CCCCe--EEEECCCCCCHHHHHHHHHHHh
Confidence 34556 9999999999999999988664
No 146
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=91.02 E-value=0.071 Score=54.16 Aligned_cols=45 Identities=11% Similarity=0.192 Sum_probs=38.3
Q ss_pred ccccccceeeeeeeee-eccCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 141 EEMIQTGISTIDVMNS-IARGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 141 ~~~l~TGiraID~l~p-igkGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
...+.||+..+|-++. +-+|+-+.|.|.+|+|||+|+.+++.+..
T Consensus 177 ~~gi~TG~~~LD~~lgGl~~G~liiIaG~pG~GKTtlal~ia~~~a 222 (444)
T 3bgw_A 177 ITGVPSGFTELDRMTYGYKRRNFVLIAARPSMGKTAFALKQAKNMS 222 (444)
T ss_dssp CCSBCCSCHHHHHHHSSBCSSCEEEEEECSSSSHHHHHHHHHHHHH
T ss_pred CCCcCCCcHHHHhhcCCCCCCcEEEEEeCCCCChHHHHHHHHHHHH
Confidence 3468899999997764 77999999999999999999999887654
No 147
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=91.00 E-value=0.49 Score=45.60 Aligned_cols=26 Identities=8% Similarity=0.009 Sum_probs=22.0
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHh
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+.-+.|.|++|+|||+|+..+++..
T Consensus 44 ~~~~vll~G~~G~GKT~la~~l~~~~ 69 (384)
T 2qby_B 44 VKFSNLFLGLTGTGKTFVSKYIFNEI 69 (384)
T ss_dssp CCCEEEEEECTTSSHHHHHHHHHHHH
T ss_pred CCCcEEEECCCCCCHHHHHHHHHHHH
Confidence 34569999999999999999888764
No 148
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis}
Probab=90.94 E-value=0.13 Score=47.63 Aligned_cols=26 Identities=12% Similarity=0.170 Sum_probs=23.4
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHH
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
-+|..++|.|++|+|||||+..|++.
T Consensus 25 ~~g~~I~I~G~~GsGKSTl~k~La~~ 50 (252)
T 4e22_A 25 AIAPVITVDGPSGAGKGTLCKALAES 50 (252)
T ss_dssp TTSCEEEEECCTTSSHHHHHHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHh
Confidence 57889999999999999999999854
No 149
>2qm8_A GTPase/ATPase; G protein, G3E, metallochaperone, chaperone; HET: MSE; 1.70A {Methylobacterium extorquens} SCOP: c.37.1.10 PDB: 2qm7_A*
Probab=90.65 E-value=0.099 Score=51.00 Aligned_cols=31 Identities=10% Similarity=0.213 Sum_probs=26.9
Q ss_pred eeeeeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 153 VMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 153 ~l~pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
.-+.+.+|..++|.|++|+|||||+..|+..
T Consensus 48 i~~~~~~g~~v~i~G~~GaGKSTLl~~l~g~ 78 (337)
T 2qm8_A 48 VLPQTGRAIRVGITGVPGVGKSTTIDALGSL 78 (337)
T ss_dssp HGGGCCCSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCcccCCCeEEEEECCCCCCHHHHHHHHHHh
Confidence 3366899999999999999999999988753
No 150
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=90.62 E-value=0.13 Score=53.74 Aligned_cols=32 Identities=28% Similarity=0.369 Sum_probs=28.0
Q ss_pred eeeeeeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 152 DVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 152 D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|.=+.+-+|++++|.|++|+|||||++.|++.
T Consensus 361 ~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~ 392 (582)
T 3b5x_A 361 HVSFSIPQGKTVALVGRSGSGKSTIANLFTRF 392 (582)
T ss_pred cceEEECCCCEEEEECCCCCCHHHHHHHHhcC
Confidence 34478899999999999999999999998754
No 151
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=90.58 E-value=0.12 Score=53.94 Aligned_cols=32 Identities=25% Similarity=0.379 Sum_probs=28.0
Q ss_pred eeeeeeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 152 DVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 152 D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|.=+.+-+|++++|.|++|+|||||++.|++.
T Consensus 361 ~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~ 392 (582)
T 3b60_A 361 NINLKIPAGKTVALVGRSGSGKSTIASLITRF 392 (582)
T ss_dssp EEEEEECTTCEEEEEECTTSSHHHHHHHHTTT
T ss_pred ceeEEEcCCCEEEEECCCCCCHHHHHHHHhhc
Confidence 34478899999999999999999999988654
No 152
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=90.55 E-value=0.13 Score=54.06 Aligned_cols=34 Identities=21% Similarity=0.275 Sum_probs=29.2
Q ss_pred ee-eeeeeeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 150 TI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 150 aI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
++ |.=+.+-+|++++|.|++|+|||||++.|++.
T Consensus 359 vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~ 393 (595)
T 2yl4_A 359 IFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRL 393 (595)
T ss_dssp EEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTS
T ss_pred cccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcC
Confidence 45 45588999999999999999999999998654
No 153
>1c9k_A COBU, adenosylcobinamide kinase; alpha/beta structure rossmann fold P-loop, transferase; HET: 5GP; 2.20A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1cbu_A
Probab=90.52 E-value=0.046 Score=48.98 Aligned_cols=42 Identities=14% Similarity=0.099 Sum_probs=28.3
Q ss_pred eeeecCCCCChhhhHHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccc--hHHHHHHHH
Q 015796 163 IPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVN--METAQFFKR 224 (400)
Q Consensus 163 ~~I~g~~G~GKt~L~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer--~e~~~~~~~ 224 (400)
++|.|++|+|||+++.+++.. + . -++|++.++. .|..+.+.+
T Consensus 2 ilV~Gg~~SGKS~~A~~la~~-~-----------------~--~~~yiaT~~~~d~e~~~rI~~ 45 (180)
T 1c9k_A 2 ILVTGGARSGKSRHAEALIGD-A-----------------P--QVLYIATSQILDDEMAARIQH 45 (180)
T ss_dssp EEEEECTTSSHHHHHHHHHCS-C-----------------S--SEEEEECCCC------CHHHH
T ss_pred EEEECCCCCcHHHHHHHHHhc-C-----------------C--CeEEEecCCCCCHHHHHHHHH
Confidence 689999999999999887643 2 1 3689999885 334444433
No 154
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D*
Probab=90.48 E-value=0.15 Score=49.03 Aligned_cols=27 Identities=15% Similarity=0.300 Sum_probs=23.9
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
++|+.++|.|++|+|||||+..|+..-
T Consensus 100 ~~g~vi~lvG~nGsGKTTll~~Lagll 126 (304)
T 1rj9_A 100 PKGRVVLVVGVNGVGKTTTIAKLGRYY 126 (304)
T ss_dssp CSSSEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCcHHHHHHHHHHHH
Confidence 478999999999999999999987653
No 155
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus}
Probab=90.47 E-value=0.15 Score=53.07 Aligned_cols=28 Identities=14% Similarity=0.336 Sum_probs=25.0
Q ss_pred eeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 156 SIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 156 pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
.+.+|++++|.|+.|+|||||+..|+..
T Consensus 308 ~i~~Ge~~~i~G~NGsGKSTLlk~l~Gl 335 (538)
T 1yqt_A 308 EIKKGEVIGIVGPNGIGKTTFVKMLAGV 335 (538)
T ss_dssp EEETTCEEEEECCTTSSHHHHHHHHHTS
T ss_pred ccCCCCEEEEECCCCCCHHHHHHHHhCC
Confidence 4679999999999999999999998753
No 156
>1z6t_A APAF-1, apoptotic protease activating factor 1; caspase activation, ADP, nucleotide binding, CARD, apoptosis; HET: ADP; 2.21A {Homo sapiens}
Probab=90.45 E-value=0.31 Score=50.32 Aligned_cols=25 Identities=20% Similarity=0.262 Sum_probs=20.6
Q ss_pred cCceeeeecCCCCChhhhHHHHHHH
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
...-++|.|++|+|||+|+.++++.
T Consensus 146 ~~~~v~I~G~~GiGKTtLa~~~~~~ 170 (591)
T 1z6t_A 146 EPGWVTIHGMAGCGKSVLAAEAVRD 170 (591)
T ss_dssp SCEEEEEECCTTSSHHHHHHHHHCC
T ss_pred CCceEEEEcCCCCCHHHHHHHHHhc
Confidence 3455899999999999999888643
No 157
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=90.45 E-value=0.15 Score=45.40 Aligned_cols=28 Identities=11% Similarity=0.058 Sum_probs=24.1
Q ss_pred eeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 156 SIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 156 pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+..+|..++|.|++|+|||||+..|+..
T Consensus 18 ~~~~~~~i~i~G~~GsGKstl~~~l~~~ 45 (201)
T 1rz3_A 18 KTAGRLVLGIDGLSRSGKTTLANQLSQT 45 (201)
T ss_dssp CCSSSEEEEEEECTTSSHHHHHHHHHHH
T ss_pred ccCCCeEEEEECCCCCCHHHHHHHHHHH
Confidence 3567889999999999999999888754
No 158
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=90.25 E-value=0.18 Score=44.51 Aligned_cols=29 Identities=7% Similarity=-0.028 Sum_probs=24.5
Q ss_pred eccCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 157 IARGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 157 igkGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
.-+|..+.|.|++|+||||++..+++.-+
T Consensus 7 ~~~~~~I~l~G~~GsGKST~~~~L~~~l~ 35 (212)
T 2wwf_A 7 KKKGKFIVFEGLDRSGKSTQSKLLVEYLK 35 (212)
T ss_dssp CBCSCEEEEEESTTSSHHHHHHHHHHHHH
T ss_pred hhcCCEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 34678899999999999999999987543
No 159
>3bs4_A Uncharacterized protein PH0321; structural genomics, unknown function, PSI-2, protein struct initiative; 1.60A {Pyrococcus horikoshii}
Probab=90.08 E-value=0.67 Score=43.70 Aligned_cols=60 Identities=8% Similarity=-0.039 Sum_probs=45.4
Q ss_pred cccceeeeeeeee--eccCceeeeecCCCCChhhhHHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccchHHH
Q 015796 144 IQTGISTIDVMNS--IARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETA 219 (400)
Q Consensus 144 l~TGiraID~l~p--igkGqr~~I~g~~G~GKt~L~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer~e~~ 219 (400)
+.|||..+|-++- +-+|.-++|.|++|.|||+|..++...+.. .+..|+|+..-|..+..
T Consensus 3 i~tGi~~LD~~l~GGl~~gs~~li~g~p~~~~~~l~~qfl~~g~~----------------~Ge~~~~~~~~e~~~~l 64 (260)
T 3bs4_A 3 LSWEIEELDREIGKIKKHSLILIHEEDASSRGKDILFYILSRKLK----------------SDNLVGMFSISYPLQLI 64 (260)
T ss_dssp BCCSSHHHHHHHCCBCTTCEEEEEECSGGGCHHHHHHHHHHHHHH----------------TTCEEEEEECSSCHHHH
T ss_pred CccCcHHHHHHhCCCCCCCcEEEEEeCCCccHHHHHHHHHHHHHH----------------CCCcEEEEEEeCCHHHH
Confidence 5799999997754 448888999999999999887776654421 22389999999886543
No 160
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=90.03 E-value=0.18 Score=43.47 Aligned_cols=26 Identities=4% Similarity=0.087 Sum_probs=22.0
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHh
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+|..+.|.|++|+||||++..+++.-
T Consensus 2 ~~~~I~i~G~~GsGKsT~~~~L~~~l 27 (192)
T 1kht_A 2 KNKVVVVTGVPGVGSTTSSQLAMDNL 27 (192)
T ss_dssp -CCEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 36679999999999999999988753
No 161
>2gj8_A MNME, tRNA modification GTPase TRME; G-domain dimer, alpha-beta-sandwich, hydrolase; HET: GDP; 1.70A {Escherichia coli BL21} SCOP: c.37.1.8 PDB: 2gj9_A* 2gja_A* 1rfl_A
Probab=90.01 E-value=0.16 Score=43.72 Aligned_cols=25 Identities=8% Similarity=0.209 Sum_probs=21.6
Q ss_pred cCceeeeecCCCCChhhhHHHHHHH
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+|.|+.|.|.+|+|||+|+..++..
T Consensus 3 ~~~ki~ivG~~g~GKStLl~~l~~~ 27 (172)
T 2gj8_A 3 HGMKVVIAGRPNAGKSSLLNALAGR 27 (172)
T ss_dssp -CEEEEEEESTTSSHHHHHHHHHTS
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCC
Confidence 5789999999999999999888643
No 162
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A
Probab=90.00 E-value=0.16 Score=52.52 Aligned_cols=30 Identities=13% Similarity=0.093 Sum_probs=26.6
Q ss_pred eeeccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 155 NSIARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 155 ~pigkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+.+.+|+.++|.|++|+|||||+..|+..-
T Consensus 288 l~i~~GeVI~LVGpNGSGKTTLl~~LAgll 317 (503)
T 2yhs_A 288 VEGKAPFVILMVGVNGVGKTTTIGKLARQF 317 (503)
T ss_dssp CCSCTTEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred eeccCCeEEEEECCCcccHHHHHHHHHHHh
Confidence 568899999999999999999999987653
No 163
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A*
Probab=90.00 E-value=0.29 Score=45.41 Aligned_cols=26 Identities=15% Similarity=0.121 Sum_probs=21.9
Q ss_pred CceeeeecCCCCChhhhHHHHHHHhc
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
...++|.|++|+|||+|+..+++..+
T Consensus 64 ~~~vLl~G~~GtGKT~la~~ia~~~~ 89 (272)
T 1d2n_A 64 LVSVLLEGPPHSGKTALAAKIAEESN 89 (272)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHHHT
T ss_pred CeEEEEECCCCCcHHHHHHHHHHHhC
Confidence 34589999999999999999887643
No 164
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=89.99 E-value=0.15 Score=53.90 Aligned_cols=33 Identities=6% Similarity=0.135 Sum_probs=27.9
Q ss_pred eeeeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 150 TIDVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 150 aID~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
+++.+..+-+|+.++|.|++|+|||||+..|+.
T Consensus 107 ~l~~vs~i~~Ge~~~LiG~NGsGKSTLlkiL~G 139 (607)
T 3bk7_A 107 VLYRLPIVKDGMVVGIVGPNGTGKTTAVKILAG 139 (607)
T ss_dssp EEECCCCCCTTSEEEEECCTTSSHHHHHHHHTT
T ss_pred eeCCCCCCCCCCEEEEECCCCChHHHHHHHHhC
Confidence 455454689999999999999999999998864
No 165
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=89.91 E-value=0.2 Score=55.90 Aligned_cols=34 Identities=9% Similarity=0.187 Sum_probs=29.4
Q ss_pred eee-eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 149 STI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 149 raI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
.++ |.=+.+.+|++++|.|++|+|||||+..|+.
T Consensus 449 ~iL~~vsl~I~~Ge~v~LiGpNGsGKSTLLk~Lag 483 (986)
T 2iw3_A 449 ILLNKTQLRLKRARRYGICGPNGCGKSTLMRAIAN 483 (986)
T ss_dssp EEEEEEEEEEETTCEEEEECSTTSSHHHHHHHHHH
T ss_pred EeEecceEEEcCCCEEEEECCCCCCHHHHHHHHhC
Confidence 345 3558899999999999999999999999984
No 166
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20
Probab=89.89 E-value=0.16 Score=47.55 Aligned_cols=27 Identities=22% Similarity=0.479 Sum_probs=22.6
Q ss_pred eeccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 156 SIARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 156 pigkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+.+| ++|.|++|+|||+|+..|+...
T Consensus 71 ~~~~g--vll~Gp~GtGKTtl~~~i~~~~ 97 (278)
T 1iy2_A 71 RIPKG--VLLVGPPGVGKTHLARAVAGEA 97 (278)
T ss_dssp CCCCE--EEEECCTTSSHHHHHHHHHHHT
T ss_pred CCCCe--EEEECCCcChHHHHHHHHHHHc
Confidence 34456 9999999999999999988654
No 167
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=89.88 E-value=0.19 Score=43.47 Aligned_cols=25 Identities=16% Similarity=0.212 Sum_probs=22.4
Q ss_pred cCceeeeecCCCCChhhhHHHHHHH
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+|..+.|.|++|+||||++..++..
T Consensus 4 ~g~~i~l~G~~GsGKST~~~~L~~~ 28 (179)
T 2pez_A 4 RGCTVWLTGLSGAGKTTVSMALEEY 28 (179)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHH
Confidence 5788999999999999999998765
No 168
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=89.80 E-value=0.14 Score=53.70 Aligned_cols=32 Identities=28% Similarity=0.397 Sum_probs=27.8
Q ss_pred eeeeeeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 152 DVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 152 D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|.=+.+-+|++++|.|++|+|||||++.|++.
T Consensus 373 ~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~ 404 (598)
T 3qf4_B 373 DITFHIKPGQKVALVGPTGSGKTTIVNLLMRF 404 (598)
T ss_dssp SEEEECCTTCEEEEECCTTSSTTHHHHHHTTS
T ss_pred ceEEEEcCCCEEEEECCCCCcHHHHHHHHhcC
Confidence 34478899999999999999999999988653
No 169
>1u0l_A Probable GTPase ENGC; permutation, OB-fold, zinc-finger, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; HET: GDP; 2.80A {Thermotoga maritima} SCOP: b.40.4.5 c.37.1.8
Probab=89.80 E-value=0.083 Score=50.53 Aligned_cols=33 Identities=12% Similarity=0.247 Sum_probs=28.9
Q ss_pred eeeeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 150 TIDVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 150 aID~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
.||-++.+.+|+.+++.|++|+|||||+..|+.
T Consensus 159 gv~~lf~~l~geiv~l~G~sG~GKSTll~~l~g 191 (301)
T 1u0l_A 159 GIEELKEYLKGKISTMAGLSGVGKSSLLNAINP 191 (301)
T ss_dssp THHHHHHHHSSSEEEEECSTTSSHHHHHHHHST
T ss_pred CHHHHHHHhcCCeEEEECCCCCcHHHHHHHhcc
Confidence 466778888999999999999999999988853
No 170
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana}
Probab=89.75 E-value=0.18 Score=49.92 Aligned_cols=30 Identities=7% Similarity=0.075 Sum_probs=26.2
Q ss_pred eeeccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 155 NSIARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 155 ~pigkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+.+.+|+.++|.|++|+||||++..|+..-
T Consensus 152 l~~~~g~vi~lvG~nGsGKTTll~~Lag~l 181 (359)
T 2og2_A 152 LGFRKPAVIMIVGVNGGGKTTSLGKLAHRL 181 (359)
T ss_dssp CCSSSSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred eecCCCeEEEEEcCCCChHHHHHHHHHhhc
Confidence 357799999999999999999999987653
No 171
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus}
Probab=89.71 E-value=0.16 Score=52.90 Aligned_cols=28 Identities=14% Similarity=0.300 Sum_probs=25.4
Q ss_pred eeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 155 NSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 155 ~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
+.+.+|+.++|.|++|+|||||+..|+.
T Consensus 289 ~~i~~Gei~~i~G~nGsGKSTLl~~l~G 316 (538)
T 3ozx_A 289 GEAKEGEIIGILGPNGIGKTTFARILVG 316 (538)
T ss_dssp EEEETTCEEEEECCTTSSHHHHHHHHTT
T ss_pred ceECCCCEEEEECCCCCCHHHHHHHHhC
Confidence 4578999999999999999999999864
No 172
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=89.68 E-value=1.3 Score=40.83 Aligned_cols=27 Identities=15% Similarity=0.278 Sum_probs=23.0
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
.+..++|.|++|+|||+|+..+++..+
T Consensus 50 ~~~~~ll~G~~GtGKT~la~~la~~~~ 76 (285)
T 3h4m_A 50 PPKGILLYGPPGTGKTLLAKAVATETN 76 (285)
T ss_dssp CCSEEEEESSSSSSHHHHHHHHHHHTT
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHhC
Confidence 455699999999999999999987654
No 173
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=89.56 E-value=0.19 Score=53.08 Aligned_cols=27 Identities=15% Similarity=0.364 Sum_probs=24.7
Q ss_pred eeccCceeeeecCCCCChhhhHHHHHH
Q 015796 156 SIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 156 pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
.+.+|+.++|.|++|+|||||+..|+.
T Consensus 378 ~v~~Gei~~i~G~NGsGKSTLlk~l~G 404 (607)
T 3bk7_A 378 EIRKGEVIGIVGPNGIGKTTFVKMLAG 404 (607)
T ss_dssp EEETTCEEEEECCTTSSHHHHHHHHHT
T ss_pred ccCCCCEEEEECCCCCCHHHHHHHHhc
Confidence 468999999999999999999999875
No 174
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A*
Probab=89.39 E-value=1.4 Score=42.89 Aligned_cols=25 Identities=20% Similarity=0.347 Sum_probs=21.7
Q ss_pred ceeeeecCCCCChhhhHHHHHHHhc
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
.-++|.|++|+|||+|+..+++..+
T Consensus 85 ~~iLL~GppGtGKT~la~ala~~~~ 109 (355)
T 2qp9_X 85 SGILLYGPPGTGKSYLAKAVATEAN 109 (355)
T ss_dssp CCEEEECSTTSCHHHHHHHHHHHHT
T ss_pred ceEEEECCCCCcHHHHHHHHHHHhC
Confidence 3489999999999999999988764
No 175
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=89.26 E-value=0.12 Score=54.08 Aligned_cols=31 Identities=23% Similarity=0.366 Sum_probs=27.1
Q ss_pred eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 152 DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 152 D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
|.=+.+-+|++++|.|++|+|||||++.|.+
T Consensus 359 ~isl~i~~G~~~~ivG~sGsGKSTll~~l~g 389 (578)
T 4a82_A 359 DINLSIEKGETVAFVGMSGGGKSTLINLIPR 389 (578)
T ss_dssp EEEEEECTTCEEEEECSTTSSHHHHHTTTTT
T ss_pred eeEEEECCCCEEEEECCCCChHHHHHHHHhc
Confidence 3447899999999999999999999987754
No 176
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=89.20 E-value=0.22 Score=42.18 Aligned_cols=24 Identities=17% Similarity=0.117 Sum_probs=20.6
Q ss_pred eeeeecCCCCChhhhHHHHHHHhc
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
.+.|.|++|+||||++..+++.-+
T Consensus 3 ~i~l~G~~GsGKsT~~~~L~~~l~ 26 (173)
T 3kb2_A 3 LIILEGPDCCFKSTVAAKLSKELK 26 (173)
T ss_dssp EEEEECSSSSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHhC
Confidence 478999999999999999987643
No 177
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20
Probab=89.16 E-value=0.25 Score=41.88 Aligned_cols=27 Identities=11% Similarity=0.217 Sum_probs=22.7
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
..+.-+.|.|++|+|||+|+..+++..
T Consensus 41 ~~~~~~ll~G~~G~GKT~l~~~~~~~~ 67 (195)
T 1jbk_A 41 RTKNNPVLIGEPGVGKTAIVEGLAQRI 67 (195)
T ss_dssp SSSCEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCCceEEECCCCCCHHHHHHHHHHHH
Confidence 345679999999999999999887764
No 178
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C
Probab=89.15 E-value=0.88 Score=43.44 Aligned_cols=25 Identities=20% Similarity=0.347 Sum_probs=21.6
Q ss_pred ceeeeecCCCCChhhhHHHHHHHhc
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
.-+++.|++|+|||+|+..+++..+
T Consensus 52 ~~vLl~GppGtGKT~la~aia~~~~ 76 (322)
T 3eie_A 52 SGILLYGPPGTGKSYLAKAVATEAN 76 (322)
T ss_dssp CEEEEECSSSSCHHHHHHHHHHHHT
T ss_pred CeEEEECCCCCcHHHHHHHHHHHHC
Confidence 3589999999999999999987754
No 179
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=89.05 E-value=0.23 Score=42.92 Aligned_cols=28 Identities=14% Similarity=0.273 Sum_probs=23.8
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
-++..+.|.|++|+||||++..+++.-+
T Consensus 9 ~~~~~i~i~G~~GsGKst~~~~l~~~~~ 36 (180)
T 3iij_A 9 MLLPNILLTGTPGVGKTTLGKELASKSG 36 (180)
T ss_dssp CCCCCEEEECSTTSSHHHHHHHHHHHHC
T ss_pred ccCCeEEEEeCCCCCHHHHHHHHHHHhC
Confidence 3567899999999999999999887644
No 180
>2rcn_A Probable GTPase ENGC; YJEQ, circularly permuted, GTP-binding, hydrolase, nucleotide-binding; HET: GDP; 2.25A {Salmonella typhimurium} PDB: 2ykr_W 4a2i_V
Probab=88.97 E-value=0.11 Score=51.48 Aligned_cols=32 Identities=6% Similarity=0.166 Sum_probs=26.2
Q ss_pred eeeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 151 IDVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 151 ID~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
++-|....+|+.++|.|++|+|||||+..|+.
T Consensus 206 l~~L~~~~~G~~~~lvG~sG~GKSTLln~L~g 237 (358)
T 2rcn_A 206 LKPLEEALTGRISIFAGQSGVGKSSLLNALLG 237 (358)
T ss_dssp HHHHHHHHTTSEEEEECCTTSSHHHHHHHHHC
T ss_pred HHHHHHhcCCCEEEEECCCCccHHHHHHHHhc
Confidence 34444566899999999999999999988863
No 181
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=88.83 E-value=0.22 Score=43.92 Aligned_cols=21 Identities=19% Similarity=0.233 Sum_probs=19.5
Q ss_pred eeeeecCCCCChhhhHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~ 182 (400)
+++|.|++|+||||++..|+.
T Consensus 3 ~i~i~G~~GsGKSTl~~~L~~ 23 (204)
T 2if2_A 3 RIGLTGNIGCGKSTVAQMFRE 23 (204)
T ss_dssp EEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHH
Confidence 689999999999999999876
No 182
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=88.80 E-value=0.33 Score=53.98 Aligned_cols=22 Identities=23% Similarity=0.409 Sum_probs=18.9
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
.++|.|..|+|||+|+.+++++
T Consensus 149 ~v~i~G~gG~GKTtLa~~~~~~ 170 (1249)
T 3sfz_A 149 WVTIYGMAGCGKSVLAAEAVRD 170 (1249)
T ss_dssp EEEEECSTTSSHHHHHHHHTCC
T ss_pred EEEEEeCCCCCHHHHHHHHhcC
Confidence 4789999999999999887644
No 183
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=88.73 E-value=0.24 Score=44.03 Aligned_cols=24 Identities=25% Similarity=0.249 Sum_probs=20.6
Q ss_pred eeeeecCCCCChhhhHHHHHHHhc
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
++.|.|++|+||||++..+++.-+
T Consensus 2 ~I~l~G~~GsGKsT~a~~L~~~~~ 25 (216)
T 3fb4_A 2 NIVLMGLPGAGKGTQAEQIIEKYE 25 (216)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHhC
Confidence 589999999999999999876543
No 184
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=88.69 E-value=0.26 Score=43.42 Aligned_cols=28 Identities=14% Similarity=0.116 Sum_probs=23.6
Q ss_pred eccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 157 IARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 157 igkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.-+|..+.|.|++|+||||++..+++.-
T Consensus 6 ~~~~~~I~l~G~~GsGKsT~~~~L~~~l 33 (215)
T 1nn5_A 6 ARRGALIVLEGVDRAGKSTQSRKLVEAL 33 (215)
T ss_dssp -CCCCEEEEEESTTSSHHHHHHHHHHHH
T ss_pred ccCCcEEEEECCCCCCHHHHHHHHHHHH
Confidence 3467789999999999999999988754
No 185
>3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana}
Probab=88.66 E-value=0.24 Score=46.30 Aligned_cols=37 Identities=14% Similarity=0.295 Sum_probs=29.0
Q ss_pred eee-eeeeeecc---CceeeeecCCCCChhhhHHHHHHHhc
Q 015796 149 STI-DVMNSIAR---GQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 149 raI-D~l~pigk---Gqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
.++ |.-+.+.+ |.++.|.|++|+||||++..+++.-+
T Consensus 33 ~~l~~~~~~i~~~l~g~~i~l~G~~GsGKSTl~~~La~~lg 73 (250)
T 3nwj_A 33 QILKKKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIMARSLG 73 (250)
T ss_dssp HHHHHHHHTTHHHHTTCCEEEECSTTSCHHHHHHHHHHHHT
T ss_pred hhhhhhhhhhhhhcCCCEEEEECCCCCCHHHHHHHHHHhcC
Confidence 344 33356666 99999999999999999999987443
No 186
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=88.58 E-value=0.25 Score=44.00 Aligned_cols=23 Identities=13% Similarity=0.225 Sum_probs=20.2
Q ss_pred eeeeecCCCCChhhhHHHHHHHh
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+++|.|++|+||||++..+++.-
T Consensus 2 ~I~l~G~~GsGKsT~a~~L~~~~ 24 (216)
T 3dl0_A 2 NLVLMGLPGAGKGTQGERIVEKY 24 (216)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 58999999999999999987653
No 187
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis}
Probab=88.57 E-value=0.13 Score=50.53 Aligned_cols=29 Identities=7% Similarity=0.166 Sum_probs=26.0
Q ss_pred eeeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 155 NSIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 155 ~pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+.+-+|+.++|.|++|+|||||++.|++.
T Consensus 170 ~~i~~G~~i~ivG~sGsGKSTll~~l~~~ 198 (361)
T 2gza_A 170 RAVQLERVIVVAGETGSGKTTLMKALMQE 198 (361)
T ss_dssp HHHHTTCCEEEEESSSSCHHHHHHHHHTT
T ss_pred HHHhcCCEEEEECCCCCCHHHHHHHHHhc
Confidence 56789999999999999999999988754
No 188
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=88.56 E-value=0.16 Score=53.20 Aligned_cols=32 Identities=19% Similarity=0.248 Sum_probs=27.5
Q ss_pred eeeeeeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 152 DVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 152 D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|.=+.+-+|++++|.|++|+|||||++.|.+.
T Consensus 361 ~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~ 392 (587)
T 3qf4_A 361 GVNFSVKPGSLVAVLGETGSGKSTLMNLIPRL 392 (587)
T ss_dssp EEEEEECTTCEEEEECSSSSSHHHHHHTTTTS
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCC
Confidence 34478999999999999999999999887653
No 189
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=88.49 E-value=0.27 Score=43.13 Aligned_cols=27 Identities=15% Similarity=0.088 Sum_probs=23.1
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
+|..+.|.|++|+||||++..+++.-+
T Consensus 3 ~~~~I~i~G~~GsGKsT~~~~L~~~l~ 29 (213)
T 2plr_A 3 KGVLIAFEGIDGSGKSSQATLLKDWIE 29 (213)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHHHT
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHHHh
Confidence 467899999999999999999987543
No 190
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=88.36 E-value=0.28 Score=41.82 Aligned_cols=25 Identities=16% Similarity=0.190 Sum_probs=21.9
Q ss_pred ceeeeecCCCCChhhhHHHHHHHhc
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
|-++|.|++|+||||+...+++.-+
T Consensus 8 ~~i~l~G~~GsGKSTva~~La~~lg 32 (168)
T 1zuh_A 8 QHLVLIGFMGSGKSSLAQELGLALK 32 (168)
T ss_dssp CEEEEESCTTSSHHHHHHHHHHHHT
T ss_pred ceEEEECCCCCCHHHHHHHHHHHhC
Confidence 6789999999999999999987543
No 191
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=88.32 E-value=0.27 Score=43.02 Aligned_cols=25 Identities=16% Similarity=0.092 Sum_probs=22.5
Q ss_pred cCceeeeecCCCCChhhhHHHHHHH
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+|..+.|.|++|+||||++..+++.
T Consensus 3 ~~~~I~l~G~~GsGKsT~~~~L~~~ 27 (204)
T 2v54_A 3 RGALIVFEGLDKSGKTTQCMNIMES 27 (204)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHT
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHH
Confidence 5778999999999999999998765
No 192
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=88.30 E-value=0.29 Score=42.25 Aligned_cols=26 Identities=15% Similarity=0.222 Sum_probs=22.4
Q ss_pred CceeeeecCCCCChhhhHHHHHHHhc
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
+..+.|.|++|+||||+...+++.-+
T Consensus 5 ~~~i~l~G~~GsGKst~a~~La~~l~ 30 (185)
T 3trf_A 5 LTNIYLIGLMGAGKTSVGSQLAKLTK 30 (185)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhC
Confidence 45789999999999999999987644
No 193
>1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B*
Probab=88.25 E-value=0.23 Score=43.39 Aligned_cols=22 Identities=18% Similarity=0.456 Sum_probs=19.8
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|++|+|++|+|||||+..++..
T Consensus 31 kv~lvG~~g~GKSTLl~~l~~~ 52 (191)
T 1oix_A 31 KVVLIGDSGVGKSNLLSRFTRN 52 (191)
T ss_dssp EEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEECcCCCCHHHHHHHHhcC
Confidence 7899999999999999988754
No 194
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=88.21 E-value=2 Score=41.26 Aligned_cols=28 Identities=7% Similarity=0.031 Sum_probs=24.1
Q ss_pred eccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 157 IARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 157 igkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
..+|..++|.|++|+||||++..|+..-
T Consensus 101 ~~~~~vi~ivG~~GsGKTTl~~~LA~~l 128 (306)
T 1vma_A 101 PEPPFVIMVVGVNGTGKTTSCGKLAKMF 128 (306)
T ss_dssp SSSCEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCCCeEEEEEcCCCChHHHHHHHHHHHH
Confidence 4678889999999999999998887653
No 195
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=88.21 E-value=4.2 Score=41.03 Aligned_cols=26 Identities=15% Similarity=0.027 Sum_probs=22.1
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHh
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
++..+.+.|++|+||||++..++..-
T Consensus 96 ~~~vI~lvG~~GsGKTTt~~kLA~~l 121 (433)
T 3kl4_A 96 LPFIIMLVGVQGSGKTTTAGKLAYFY 121 (433)
T ss_dssp SSEEEEECCCTTSCHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 57778999999999999998887553
No 196
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=88.14 E-value=0.31 Score=41.70 Aligned_cols=25 Identities=12% Similarity=0.005 Sum_probs=21.5
Q ss_pred CceeeeecCCCCChhhhHHHHHHHh
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
|.-+.|.|.+|+||||+...+++.-
T Consensus 3 ~~~i~l~G~~GsGKST~a~~La~~l 27 (178)
T 1qhx_A 3 TRMIILNGGSSAGKSGIVRCLQSVL 27 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHS
T ss_pred ceEEEEECCCCCCHHHHHHHHHHhc
Confidence 4568899999999999999998754
No 197
>2f9l_A RAB11B, member RAS oncogene family; RAB11B GTPase, vesicle transport, hydrolase; HET: GDP; 1.55A {Homo sapiens} SCOP: c.37.1.8 PDB: 2f9m_A* 1yzk_A* 2hv8_A* 2gzd_A* 2gzh_A* 2d7c_A* 3bfk_A*
Probab=88.10 E-value=0.27 Score=43.01 Aligned_cols=22 Identities=18% Similarity=0.456 Sum_probs=19.9
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|++|+|++|+|||||+..++..
T Consensus 7 kv~lvG~~g~GKSTLl~~l~~~ 28 (199)
T 2f9l_A 7 KVVLIGDSGVGKSNLLSRFTRN 28 (199)
T ss_dssp EEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEECcCCCCHHHHHHHHhcC
Confidence 7899999999999999988754
No 198
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=87.98 E-value=0.31 Score=42.26 Aligned_cols=28 Identities=14% Similarity=0.221 Sum_probs=23.7
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
.++..+.|.|++|+||||++..+++.-+
T Consensus 7 ~~~~~I~l~G~~GsGKsT~~~~La~~l~ 34 (196)
T 2c95_A 7 KKTNIIFVVGGPGSGKGTQCEKIVQKYG 34 (196)
T ss_dssp TTSCEEEEEECTTSSHHHHHHHHHHHHC
T ss_pred cCCCEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4677899999999999999999886543
No 199
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=87.84 E-value=0.23 Score=50.23 Aligned_cols=29 Identities=17% Similarity=0.297 Sum_probs=24.9
Q ss_pred eeeccCce--eeeecCCCCChhhhHHHHHHH
Q 015796 155 NSIARGQK--IPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 155 ~pigkGqr--~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+.+-+|.. ++|+|++|+|||||+..|+..
T Consensus 35 l~i~~Gei~~vaLvG~nGaGKSTLln~L~G~ 65 (427)
T 2qag_B 35 KSVSQGFCFNILCVGETGLGKSTLMDTLFNT 65 (427)
T ss_dssp HSCC-CCEEEEEEECSTTSSSHHHHHHHHTS
T ss_pred eEecCCCeeEEEEECCCCCCHHHHHHHHhCc
Confidence 67789999 999999999999999988643
No 200
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A*
Probab=87.83 E-value=1.1 Score=50.48 Aligned_cols=22 Identities=14% Similarity=0.274 Sum_probs=19.5
Q ss_pred ceeeeecCCCCChhhhHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~ 182 (400)
.-++|.|+.|+|||||+.++++
T Consensus 151 RVV~IvGmGGIGKTTLAk~Vy~ 172 (1221)
T 1vt4_I 151 KNVLIDGVLGSGKTWVALDVCL 172 (1221)
T ss_dssp CEEEECCSTTSSHHHHHHHHHH
T ss_pred eEEEEEcCCCccHHHHHHHHHH
Confidence 4589999999999999998875
No 201
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=87.73 E-value=0.3 Score=47.58 Aligned_cols=28 Identities=11% Similarity=0.056 Sum_probs=24.6
Q ss_pred eccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 157 IARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 157 igkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
-.+|+.++|.|++|+||||++..|+..-
T Consensus 126 ~~~g~vi~lvG~nGaGKTTll~~Lag~l 153 (328)
T 3e70_C 126 AEKPYVIMFVGFNGSGKTTTIAKLANWL 153 (328)
T ss_dssp SCSSEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 3689999999999999999999987653
No 202
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=87.69 E-value=2.6 Score=42.73 Aligned_cols=26 Identities=12% Similarity=0.170 Sum_probs=22.2
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHh
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
++..+.+.|..|+||||++..++...
T Consensus 99 ~p~vIlivG~~G~GKTTt~~kLA~~l 124 (443)
T 3dm5_A 99 KPTILLMVGIQGSGKTTTVAKLARYF 124 (443)
T ss_dssp SSEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCeEEEEECcCCCCHHHHHHHHHHHH
Confidence 56778999999999999998887654
No 203
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A*
Probab=87.59 E-value=0.32 Score=42.33 Aligned_cols=24 Identities=33% Similarity=0.646 Sum_probs=21.0
Q ss_pred eeeeecCCCCChhhhHHHHHHHhc
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
.+.|.|++|+||||++..+++.-+
T Consensus 2 ~I~i~G~~GsGKsT~~~~L~~~l~ 25 (205)
T 2jaq_A 2 KIAIFGTVGAGKSTISAEISKKLG 25 (205)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHC
T ss_pred EEEEECCCccCHHHHHHHHHHhcC
Confidence 578999999999999999987644
No 204
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1
Probab=87.58 E-value=0.33 Score=41.88 Aligned_cols=26 Identities=15% Similarity=0.218 Sum_probs=21.8
Q ss_pred CceeeeecCCCCChhhhHHHHHHHhc
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
+..+.|.|++|+||||++..+++.-+
T Consensus 3 ~~~I~l~G~~GsGKsT~a~~L~~~~~ 28 (196)
T 1tev_A 3 PLVVFVLGGPGAGKGTQCARIVEKYG 28 (196)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHC
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHhC
Confidence 45689999999999999999876543
No 205
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=87.52 E-value=0.35 Score=42.04 Aligned_cols=29 Identities=21% Similarity=0.240 Sum_probs=24.3
Q ss_pred eccCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 157 IARGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 157 igkGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
.-+|..+.+.|.+|+||||++..++..-.
T Consensus 10 ~~~~~~i~l~G~~GsGKsT~~~~L~~~l~ 38 (186)
T 2yvu_A 10 IEKGIVVWLTGLPGSGKTTIATRLADLLQ 38 (186)
T ss_dssp CSCCEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred cCCCcEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 34678899999999999999999877643
No 206
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=87.50 E-value=0.25 Score=56.75 Aligned_cols=34 Identities=21% Similarity=0.327 Sum_probs=29.1
Q ss_pred ee-eeeeeeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 150 TI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 150 aI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
++ |.=+.|-+|||++|.|++|+|||||++.|.|-
T Consensus 1094 VL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl 1128 (1321)
T 4f4c_A 1094 ILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERF 1128 (1321)
T ss_dssp SEEEEEEEECTTCEEEEECSTTSSTTSHHHHHTTS
T ss_pred cccceeEEECCCCEEEEECCCCChHHHHHHHHhcC
Confidence 44 34488999999999999999999999988764
No 207
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=87.43 E-value=0.32 Score=42.30 Aligned_cols=27 Identities=7% Similarity=0.139 Sum_probs=23.2
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
-++..+.|.|++|+||||++..+++.-
T Consensus 10 ~~~~~I~l~G~~GsGKsT~a~~L~~~l 36 (199)
T 2bwj_A 10 RKCKIIFIIGGPGSGKGTQCEKLVEKY 36 (199)
T ss_dssp HHSCEEEEEECTTSSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHh
Confidence 356789999999999999999998754
No 208
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A*
Probab=87.42 E-value=0.3 Score=48.22 Aligned_cols=28 Identities=11% Similarity=0.002 Sum_probs=24.7
Q ss_pred eccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 157 IARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 157 igkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+-+|+.++|.|++|+|||||+..|++.-
T Consensus 133 ~~~g~~i~ivG~~GsGKTTll~~l~~~~ 160 (372)
T 2ewv_A 133 HRKMGLILVTGPTGSGKSTTIASMIDYI 160 (372)
T ss_dssp TSSSEEEEEECSSSSSHHHHHHHHHHHH
T ss_pred hcCCCEEEEECCCCCCHHHHHHHHHhhc
Confidence 6789999999999999999998887653
No 209
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=87.41 E-value=2.3 Score=38.45 Aligned_cols=25 Identities=16% Similarity=0.231 Sum_probs=21.5
Q ss_pred ceeeeecCCCCChhhhHHHHHHHhc
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
.-++|.|++|+|||+|+..+++..+
T Consensus 40 ~~vll~G~~GtGKT~la~~la~~~~ 64 (262)
T 2qz4_A 40 KGALLLGPPGCGKTLLAKAVATEAQ 64 (262)
T ss_dssp CEEEEESCTTSSHHHHHHHHHHHHT
T ss_pred ceEEEECCCCCCHHHHHHHHHHHhC
Confidence 4489999999999999999987654
No 210
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum}
Probab=87.40 E-value=0.27 Score=41.70 Aligned_cols=27 Identities=11% Similarity=0.167 Sum_probs=22.5
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.....+.|.|++|+|||+|+..+++..
T Consensus 41 ~~~~~vll~G~~G~GKT~la~~~~~~~ 67 (187)
T 2p65_A 41 RTKNNPILLGDPGVGKTAIVEGLAIKI 67 (187)
T ss_dssp SSSCEEEEESCGGGCHHHHHHHHHHHH
T ss_pred CCCCceEEECCCCCCHHHHHHHHHHHH
Confidence 345668999999999999999887764
No 211
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A*
Probab=87.39 E-value=0.15 Score=46.43 Aligned_cols=28 Identities=4% Similarity=-0.062 Sum_probs=24.0
Q ss_pred eeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 156 SIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 156 pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+.-+|..++|.|+.|+|||||+..|+..
T Consensus 16 ~~~~g~~i~i~G~~GsGKSTl~~~L~~~ 43 (230)
T 2vp4_A 16 EGTQPFTVLIEGNIGSGKTTYLNHFEKY 43 (230)
T ss_dssp TTCCCEEEEEECSTTSCHHHHHHTTGGG
T ss_pred CCCCceEEEEECCCCCCHHHHHHHHHhc
Confidence 4468899999999999999999887654
No 212
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=87.23 E-value=0.93 Score=45.52 Aligned_cols=23 Identities=13% Similarity=0.336 Sum_probs=21.5
Q ss_pred eeeecCCCCChhhhHHHHHHHhc
Q 015796 163 IPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 163 ~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
++++||+|+|||.|+..+|..++
T Consensus 185 vLL~GPPGTGKTllAkAiA~e~~ 207 (405)
T 4b4t_J 185 VILYGPPGTGKTLLARAVAHHTD 207 (405)
T ss_dssp EEEESCSSSSHHHHHHHHHHHHT
T ss_pred eEEeCCCCCCHHHHHHHHHHhhC
Confidence 89999999999999999998876
No 213
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A*
Probab=87.21 E-value=0.35 Score=43.62 Aligned_cols=27 Identities=19% Similarity=0.267 Sum_probs=22.1
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
-++.++.|.|++|+||||++..|++.-
T Consensus 5 ~~~~~I~l~G~~GsGKsT~a~~La~~l 31 (227)
T 1zd8_A 5 ARLLRAVIMGAPGSGKGTVSSRITTHF 31 (227)
T ss_dssp --CCEEEEEECTTSSHHHHHHHHHHHS
T ss_pred ccCcEEEEECCCCCCHHHHHHHHHHHc
Confidence 456789999999999999999987653
No 214
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=87.20 E-value=0.36 Score=41.72 Aligned_cols=26 Identities=4% Similarity=0.000 Sum_probs=22.3
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHh
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
++..+.|.|.+|+||||++..+++.-
T Consensus 4 ~~~~I~l~G~~GsGKST~~~~L~~~l 29 (193)
T 2rhm_A 4 TPALIIVTGHPATGKTTLSQALATGL 29 (193)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHc
Confidence 56678999999999999999987654
No 215
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens}
Probab=87.18 E-value=0.31 Score=45.94 Aligned_cols=22 Identities=14% Similarity=0.357 Sum_probs=19.5
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+++|.|++|+|||||+..|+..
T Consensus 4 ~v~lvG~nGaGKSTLln~L~g~ 25 (270)
T 3sop_A 4 NIMVVGQSGLGKSTLVNTLFKS 25 (270)
T ss_dssp EEEEEESSSSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 5789999999999999988754
No 216
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=87.13 E-value=0.31 Score=43.03 Aligned_cols=21 Identities=19% Similarity=0.159 Sum_probs=18.9
Q ss_pred eeeeecCCCCChhhhHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~ 182 (400)
.++|.|++|+||||++..++.
T Consensus 4 ~i~l~G~~GsGKST~~~~La~ 24 (206)
T 1jjv_A 4 IVGLTGGIGSGKTTIANLFTD 24 (206)
T ss_dssp EEEEECSTTSCHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 479999999999999999865
No 217
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=87.05 E-value=0.35 Score=46.14 Aligned_cols=27 Identities=15% Similarity=-0.048 Sum_probs=22.8
Q ss_pred eccCceeeeecCCCCChhhhHHHHHHH
Q 015796 157 IARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 157 igkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
-.++..++|.|++|+|||||+..|.+.
T Consensus 28 ~~~~~ii~I~G~sGsGKSTla~~L~~~ 54 (290)
T 1odf_A 28 NKCPLFIFFSGPQGSGKSFTSIQIYNH 54 (290)
T ss_dssp CCSCEEEEEECCTTSSHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHH
Confidence 356778999999999999999887654
No 218
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=86.99 E-value=0.32 Score=41.75 Aligned_cols=26 Identities=15% Similarity=0.148 Sum_probs=18.1
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHh
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
++..+.|.|.+|+||||++..+++.-
T Consensus 4 ~~~~I~l~G~~GsGKST~a~~La~~l 29 (183)
T 2vli_A 4 RSPIIWINGPFGVGKTHTAHTLHERL 29 (183)
T ss_dssp -CCEEEEECCC----CHHHHHHHHHS
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHhc
Confidence 66789999999999999999987653
No 219
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A*
Probab=86.93 E-value=0.39 Score=42.96 Aligned_cols=26 Identities=12% Similarity=0.188 Sum_probs=22.6
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHh
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+|-++.+.|++|+||||+...+++.-
T Consensus 3 ~~~~I~l~G~~GsGKsT~a~~La~~l 28 (220)
T 1aky_A 3 ESIRMVLIGPPGAGKGTQAPNLQERF 28 (220)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHc
Confidence 56789999999999999999988654
No 220
>1svm_A Large T antigen; AAA+ fold, viral protein; HET: ATP; 1.94A {Simian virus 40} SCOP: c.37.1.20 PDB: 1svl_A* 1svo_A 1n25_A 2h1l_A
Probab=86.83 E-value=0.33 Score=48.27 Aligned_cols=29 Identities=10% Similarity=0.051 Sum_probs=25.9
Q ss_pred eeeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 155 NSIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 155 ~pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+.+.+|+.++|.|++|+|||||+..|+..
T Consensus 164 ~~i~~~~~i~l~G~~GsGKSTl~~~l~~~ 192 (377)
T 1svm_A 164 YNIPKKRYWLFKGPIDSGKTTLAAALLEL 192 (377)
T ss_dssp HCCTTCCEEEEECSTTSSHHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCCCCHHHHHHHHHhh
Confidence 56789999999999999999999988754
No 221
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens}
Probab=86.80 E-value=2.7 Score=40.75 Aligned_cols=26 Identities=31% Similarity=0.397 Sum_probs=22.3
Q ss_pred CceeeeecCCCCChhhhHHHHHHHhc
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
..-++|.|++|+|||+|+..+++..+
T Consensus 117 ~~~vLl~GppGtGKT~la~aia~~~~ 142 (357)
T 3d8b_A 117 PKGILLFGPPGTGKTLIGKCIASQSG 142 (357)
T ss_dssp CSEEEEESSTTSSHHHHHHHHHHHTT
T ss_pred CceEEEECCCCCCHHHHHHHHHHHcC
Confidence 44589999999999999999987654
No 222
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens}
Probab=86.71 E-value=1.9 Score=41.33 Aligned_cols=24 Identities=25% Similarity=0.400 Sum_probs=21.5
Q ss_pred ceeeeecCCCCChhhhHHHHHHHh
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.-+++.|++|+|||+|+..+++..
T Consensus 46 ~~iLL~GppGtGKT~la~ala~~~ 69 (322)
T 1xwi_A 46 RGILLFGPPGTGKSYLAKAVATEA 69 (322)
T ss_dssp SEEEEESSSSSCHHHHHHHHHHHT
T ss_pred ceEEEECCCCccHHHHHHHHHHHc
Confidence 458999999999999999998775
No 223
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus}
Probab=86.69 E-value=0.41 Score=45.42 Aligned_cols=28 Identities=11% Similarity=0.261 Sum_probs=23.7
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
..+.-++|.|++|+|||+|+..+++..+
T Consensus 47 ~~~~~vLL~Gp~GtGKT~la~ala~~~~ 74 (301)
T 3cf0_A 47 TPSKGVLFYGPPGCGKTLLAKAIANECQ 74 (301)
T ss_dssp CCCSEEEEECSSSSSHHHHHHHHHHHTT
T ss_pred CCCceEEEECCCCcCHHHHHHHHHHHhC
Confidence 3566799999999999999999987654
No 224
>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A*
Probab=86.66 E-value=0.36 Score=40.87 Aligned_cols=22 Identities=14% Similarity=0.209 Sum_probs=19.4
Q ss_pred ceeeeecCCCCChhhhHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~ 182 (400)
-++.++|.+|+|||+|+..++.
T Consensus 4 ~~v~lvG~~gvGKStL~~~l~~ 25 (165)
T 2wji_A 4 YEIALIGNPNVGKSTIFNALTG 25 (165)
T ss_dssp EEEEEECSTTSSHHHHHHHHHC
T ss_pred cEEEEECCCCCCHHHHHHHHhC
Confidence 3789999999999999988864
No 225
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=86.64 E-value=0.38 Score=41.57 Aligned_cols=25 Identities=20% Similarity=0.333 Sum_probs=21.4
Q ss_pred ceeeeecCCCCChhhhHHHHHHHhc
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
.++.|.|++|+||||+...+++.-+
T Consensus 3 ~~I~l~G~~GsGKsT~a~~La~~lg 27 (184)
T 2iyv_A 3 PKAVLVGLPGSGKSTIGRRLAKALG 27 (184)
T ss_dssp CSEEEECSTTSSHHHHHHHHHHHHT
T ss_pred CeEEEECCCCCCHHHHHHHHHHHcC
Confidence 4689999999999999999987543
No 226
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus}
Probab=86.63 E-value=0.28 Score=51.07 Aligned_cols=29 Identities=3% Similarity=0.156 Sum_probs=24.7
Q ss_pred eeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 154 MNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 154 l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
|-..-+|+.++|+|++|+|||||++.|+.
T Consensus 19 l~~~~~Gei~gLiGpNGaGKSTLlkiL~G 47 (538)
T 3ozx_A 19 LPTPKNNTILGVLGKNGVGKTTVLKILAG 47 (538)
T ss_dssp CCCCCTTEEEEEECCTTSSHHHHHHHHTT
T ss_pred CCCCCCCCEEEEECCCCCcHHHHHHHHhc
Confidence 33445899999999999999999998864
No 227
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=86.60 E-value=0.39 Score=42.32 Aligned_cols=25 Identities=16% Similarity=0.349 Sum_probs=21.4
Q ss_pred ceeeeecCCCCChhhhHHHHHHHhc
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
-.+.|.|++|+||||++..|++.-+
T Consensus 19 ~~I~l~G~~GsGKSTla~~L~~~lg 43 (202)
T 3t61_A 19 GSIVVMGVSGSGKSSVGEAIAEACG 43 (202)
T ss_dssp SCEEEECSTTSCHHHHHHHHHHHHT
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4689999999999999999887643
No 228
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A
Probab=86.52 E-value=0.43 Score=41.97 Aligned_cols=27 Identities=15% Similarity=0.314 Sum_probs=22.4
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
++..+.|.|++|+||||++..+++.-+
T Consensus 19 ~~~~I~l~G~~GsGKST~a~~La~~l~ 45 (201)
T 2cdn_A 19 SHMRVLLLGPPGAGKGTQAVKLAEKLG 45 (201)
T ss_dssp SCCEEEEECCTTSSHHHHHHHHHHHHT
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 445789999999999999999886543
No 229
>1q3t_A Cytidylate kinase; nucleotide monophosphate kinase, CMP kinase, transferase; NMR {Streptococcus pneumoniae} SCOP: c.37.1.1
Probab=86.51 E-value=0.4 Score=43.57 Aligned_cols=26 Identities=15% Similarity=0.202 Sum_probs=22.8
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHH
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
.+|.+++|.|++|+||||++..++..
T Consensus 14 ~~~~~i~i~G~~gsGKst~~~~l~~~ 39 (236)
T 1q3t_A 14 MKTIQIAIDGPASSGKSTVAKIIAKD 39 (236)
T ss_dssp CCCCEEEEECSSCSSHHHHHHHHHHH
T ss_pred cCCcEEEEECCCCCCHHHHHHHHHHH
Confidence 46788999999999999999988764
No 230
>3be4_A Adenylate kinase; malaria, cryptosporidium parvum nonprotein inhibitors, nucleotide-binding, transferase; HET: AP5; 1.60A {Cryptosporidium parvum iowa II}
Probab=86.46 E-value=0.43 Score=42.79 Aligned_cols=27 Identities=19% Similarity=0.270 Sum_probs=23.1
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
+|.++.|.|++|+||||++..|+..-+
T Consensus 4 ~~~~I~l~G~~GsGKsT~a~~La~~l~ 30 (217)
T 3be4_A 4 KKHNLILIGAPGSGKGTQCEFIKKEYG 30 (217)
T ss_dssp GCCEEEEEECTTSSHHHHHHHHHHHHC
T ss_pred CceEEEEECCCCCCHHHHHHHHHHHhC
Confidence 567899999999999999999887543
No 231
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=86.39 E-value=0.25 Score=54.98 Aligned_cols=31 Identities=10% Similarity=0.196 Sum_probs=27.6
Q ss_pred eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 152 DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 152 D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
|.=+.+-+|++++|.|++|+|||||+..|+.
T Consensus 691 dVSl~I~~GeivaIiGpNGSGKSTLLklLaG 721 (986)
T 2iw3_A 691 DINFQCSLSSRIAVIGPNGAGKSTLINVLTG 721 (986)
T ss_dssp EEEEEEETTCEEEECSCCCHHHHHHHHHHTT
T ss_pred ccEEEEcCCCEEEEECCCCCCHHHHHHHHhC
Confidence 4557899999999999999999999999864
No 232
>2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori} SCOP: c.37.1.11 PDB: 1nly_A* 1nlz_A 1opx_A* 1g6o_A
Probab=86.29 E-value=0.16 Score=49.37 Aligned_cols=29 Identities=17% Similarity=0.250 Sum_probs=25.6
Q ss_pred eeeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 155 NSIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 155 ~pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+.+-+|+.++|.|++|+|||||++.|+..
T Consensus 166 ~~i~~g~~v~i~G~~GsGKTTll~~l~g~ 194 (330)
T 2pt7_A 166 DGIAIGKNVIVCGGTGSGKTTYIKSIMEF 194 (330)
T ss_dssp HHHHHTCCEEEEESTTSCHHHHHHHGGGG
T ss_pred hhccCCCEEEEECCCCCCHHHHHHHHhCC
Confidence 56678999999999999999999888654
No 233
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus}
Probab=86.27 E-value=0.26 Score=52.37 Aligned_cols=28 Identities=14% Similarity=0.259 Sum_probs=24.9
Q ss_pred eeeeeccCceeeeecCCCCChhhhHHHH
Q 015796 153 VMNSIARGQKIPLFSAAGLPHNEIAAQI 180 (400)
Q Consensus 153 ~l~pigkGqr~~I~g~~G~GKt~L~~~i 180 (400)
.=+.|.+|+.++|.|++|+|||||+..|
T Consensus 341 vsl~I~~Ge~vaIiGpnGsGKSTLl~~i 368 (670)
T 3ux8_A 341 VSVKIPLGTFVAVTGVSGSGKSTLVNEV 368 (670)
T ss_dssp EEEEEETTSEEEEECSTTSSHHHHHTTT
T ss_pred ceeEecCCCEEEEEeeCCCCHHHHHHHH
Confidence 4478999999999999999999998654
No 234
>3kta_A Chromosome segregation protein SMC; structural maintenance of chromosomes, ABC ATPase, CFTR adenylate kinase, AP5A, transferase; HET: AP5; 1.63A {Pyrococcus furiosus} PDB: 1xex_A* 1xew_X*
Probab=86.21 E-value=0.52 Score=40.61 Aligned_cols=30 Identities=20% Similarity=0.278 Sum_probs=24.2
Q ss_pred eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 152 DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 152 D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
+.-+.+.+| ..+|.|+.|+|||+|+..|..
T Consensus 19 ~~~~~~~~g-~~~i~G~NGsGKStll~ai~~ 48 (182)
T 3kta_A 19 KVVIPFSKG-FTAIVGANGSGKSNIGDAILF 48 (182)
T ss_dssp CEEEECCSS-EEEEEECTTSSHHHHHHHHHH
T ss_pred cEEEecCCC-cEEEECCCCCCHHHHHHHHHH
Confidence 344566677 889999999999999988754
No 235
>4b4t_I 26S protease regulatory subunit 4 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=86.20 E-value=1.6 Score=44.28 Aligned_cols=23 Identities=22% Similarity=0.391 Sum_probs=21.6
Q ss_pred eeeecCCCCChhhhHHHHHHHhc
Q 015796 163 IPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 163 ~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
++++||+|+|||.|+..+|..++
T Consensus 219 vLLyGPPGTGKTlLAkAiA~e~~ 241 (437)
T 4b4t_I 219 VILYGAPGTGKTLLAKAVANQTS 241 (437)
T ss_dssp EEEESSTTTTHHHHHHHHHHHHT
T ss_pred CceECCCCchHHHHHHHHHHHhC
Confidence 89999999999999999998876
No 236
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus}
Probab=85.97 E-value=0.37 Score=51.14 Aligned_cols=26 Identities=23% Similarity=0.367 Sum_probs=23.3
Q ss_pred eeeeeeccCceeeeecCCCCChhhhH
Q 015796 152 DVMNSIARGQKIPLFSAAGLPHNEIA 177 (400)
Q Consensus 152 D~l~pigkGqr~~I~g~~G~GKt~L~ 177 (400)
|.=+.+-+|+.++|.|++|+|||||+
T Consensus 36 ~vsl~i~~Ge~~~liGpNGaGKSTLl 61 (670)
T 3ux8_A 36 NIDVEIPRGKLVVLTGLSGSGKSSLA 61 (670)
T ss_dssp SEEEEEETTSEEEEECSTTSSHHHHH
T ss_pred ccEEEECCCCEEEEECCCCCCHHHHh
Confidence 34478999999999999999999996
No 237
>2zej_A Dardarin, leucine-rich repeat kinase 2; parkinson'S disease, LRRK2, ROC, GTPase, ROCO, ATP-B disease mutation, GTP-binding, GTPase activation; HET: GDP; 2.00A {Homo sapiens} PDB: 3d6t_B*
Probab=85.95 E-value=0.33 Score=41.87 Aligned_cols=21 Identities=14% Similarity=0.316 Sum_probs=18.9
Q ss_pred eeeeecCCCCChhhhHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~ 182 (400)
|+.|.|++|+|||+|+..++.
T Consensus 4 kv~ivG~~gvGKStLl~~l~~ 24 (184)
T 2zej_A 4 KLMIVGNTGSGKTTLLQQLMK 24 (184)
T ss_dssp EEEEESCTTSSHHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 789999999999999988754
No 238
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp}
Probab=85.88 E-value=1.4 Score=41.92 Aligned_cols=24 Identities=25% Similarity=0.297 Sum_probs=20.9
Q ss_pred eeeeecCCCCChhhhHHHHHHHhc
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
-++|.|++|+|||+|+..+++..+
T Consensus 57 ~vll~G~~GtGKT~la~~ia~~~~ 80 (338)
T 3pfi_A 57 HILFSGPAGLGKTTLANIISYEMS 80 (338)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHTT
T ss_pred eEEEECcCCCCHHHHHHHHHHHhC
Confidence 589999999999999999877643
No 239
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=85.87 E-value=0.41 Score=41.15 Aligned_cols=24 Identities=13% Similarity=0.250 Sum_probs=20.9
Q ss_pred eeeeecCCCCChhhhHHHHHHHhc
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
++.|.|++|+||||+...|++.-+
T Consensus 6 ~i~i~G~~GsGKsTla~~La~~l~ 29 (175)
T 1via_A 6 NIVFIGFMGSGKSTLARALAKDLD 29 (175)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHHT
T ss_pred EEEEEcCCCCCHHHHHHHHHHHcC
Confidence 588999999999999999987543
No 240
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=85.82 E-value=0.46 Score=42.35 Aligned_cols=27 Identities=22% Similarity=0.202 Sum_probs=23.6
Q ss_pred eccCceeeeecCCCCChhhhHHHHHHH
Q 015796 157 IARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 157 igkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+.+|..+.|.|.+|+||||++..+++.
T Consensus 22 ~~~~~~i~~~G~~GsGKsT~~~~l~~~ 48 (211)
T 1m7g_A 22 NQRGLTIWLTGLSASGKSTLAVELEHQ 48 (211)
T ss_dssp TSSCEEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHH
Confidence 457888999999999999999998765
No 241
>3euj_A Chromosome partition protein MUKB, linker; MUKB, MUKE, chromosome condensation, condensin, SMC, N subunit, ABC-type ATPase, WHD, ATP-binding; HET: AGS; 3.10A {Haemophilus ducreyi} PDB: 3euk_A*
Probab=85.81 E-value=0.5 Score=48.54 Aligned_cols=31 Identities=10% Similarity=-0.003 Sum_probs=26.1
Q ss_pred eeeeeeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 152 DVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 152 D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|.-+.+-+ +.++|.|++|+|||||+..|+.-
T Consensus 22 ~vsl~i~~-e~~~liG~nGsGKSTLl~~l~Gl 52 (483)
T 3euj_A 22 ARTFDFDE-LVTTLSGGNGAGKSTTMAGFVTA 52 (483)
T ss_dssp EEEEECCS-SEEEEECCTTSSHHHHHHHHHHH
T ss_pred ceEEEEcc-ceEEEECCCCCcHHHHHHHHhcC
Confidence 33467788 99999999999999999988753
No 242
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=85.79 E-value=0.46 Score=43.43 Aligned_cols=35 Identities=14% Similarity=0.112 Sum_probs=25.6
Q ss_pred eeeeee-eeccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 150 TIDVMN-SIARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 150 aID~l~-pigkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+|..+ ...+|..+.|.|++|+||||++..++..-
T Consensus 15 ~~~~~~~~~~~g~~i~i~G~~GsGKsT~~~~l~~~l 50 (229)
T 4eaq_A 15 TENLYFQSNAMSAFITFEGPEGSGKTTVINEVYHRL 50 (229)
T ss_dssp -----CCCCCCCEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCeeEeecCCCeEEEEEcCCCCCHHHHHHHHHHHH
Confidence 344444 46689999999999999999999987654
No 243
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A*
Probab=85.72 E-value=0.44 Score=46.91 Aligned_cols=27 Identities=7% Similarity=-0.038 Sum_probs=23.1
Q ss_pred eccCceeeeecCCCCChhhhHHHHHHH
Q 015796 157 IARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 157 igkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
..+|+.++|.|++|+|||||+..|+..
T Consensus 120 ~~~~g~i~I~GptGSGKTTlL~~l~g~ 146 (356)
T 3jvv_A 120 DVPRGLVLVTGPTGSGKSTTLAAMLDY 146 (356)
T ss_dssp HCSSEEEEEECSTTSCHHHHHHHHHHH
T ss_pred hCCCCEEEEECCCCCCHHHHHHHHHhc
Confidence 457779999999999999999877654
No 244
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=85.69 E-value=0.45 Score=40.92 Aligned_cols=23 Identities=9% Similarity=0.030 Sum_probs=20.1
Q ss_pred eeeeecCCCCChhhhHHHHHHHh
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+.|.|++|+||||++..+++.-
T Consensus 3 ~I~i~G~~GsGKsT~~~~L~~~l 25 (194)
T 1nks_A 3 IGIVTGIPGVGKSTVLAKVKEIL 25 (194)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 47899999999999999988754
No 245
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=85.64 E-value=0.42 Score=40.69 Aligned_cols=21 Identities=14% Similarity=0.094 Sum_probs=19.0
Q ss_pred eeeeecCCCCChhhhHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~ 182 (400)
.+.|.|++|+||||++..+++
T Consensus 4 ~I~i~G~~GsGKST~a~~L~~ 24 (181)
T 1ly1_A 4 IILTIGCPGSGKSTWAREFIA 24 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEecCCCCCHHHHHHHHHh
Confidence 478899999999999999987
No 246
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A*
Probab=85.59 E-value=0.46 Score=41.69 Aligned_cols=26 Identities=8% Similarity=0.142 Sum_probs=21.5
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHh
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+...+.|.|++|+||||++..+++.-
T Consensus 14 ~~~~I~l~G~~GsGKsT~~~~L~~~~ 39 (203)
T 1ukz_A 14 QVSVIFVLGGPGAGKGTQCEKLVKDY 39 (203)
T ss_dssp TCEEEEEECSTTSSHHHHHHHHHHHS
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHc
Confidence 34468999999999999999987653
No 247
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426}
Probab=85.56 E-value=0.52 Score=41.33 Aligned_cols=24 Identities=17% Similarity=0.245 Sum_probs=21.3
Q ss_pred ceeeeecCCCCChhhhHHHHHHHh
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+-+.|.|++|+|||+|+..+++..
T Consensus 55 ~~~~l~G~~GtGKT~la~~i~~~~ 78 (202)
T 2w58_A 55 KGLYLHGSFGVGKTYLLAAIANEL 78 (202)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHH
Confidence 678999999999999999888765
No 248
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=85.52 E-value=0.48 Score=43.56 Aligned_cols=26 Identities=8% Similarity=0.121 Sum_probs=22.3
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHh
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
++-++.|.|++|+||||++..+++.-
T Consensus 28 ~~~~I~l~G~~GsGKsT~a~~L~~~~ 53 (243)
T 3tlx_A 28 PDGRYIFLGAPGSGKGTQSLNLKKSH 53 (243)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHh
Confidence 45579999999999999999987653
No 249
>2dyk_A GTP-binding protein; GTPase, ribosome-binding protein, structural genomics; HET: GDP; 1.96A {Thermus thermophilus}
Probab=85.52 E-value=0.43 Score=39.43 Aligned_cols=22 Identities=5% Similarity=0.259 Sum_probs=19.4
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+...
T Consensus 3 ki~v~G~~~~GKSsli~~l~~~ 24 (161)
T 2dyk_A 3 KVVIVGRPNVGKSSLFNRLLKK 24 (161)
T ss_dssp EEEEECCTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 7899999999999999887643
No 250
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=85.51 E-value=0.48 Score=41.07 Aligned_cols=24 Identities=13% Similarity=0.202 Sum_probs=20.7
Q ss_pred ceeeeecCCCCChhhhHHHHHHHh
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
..+.|.|++|+|||+|+..+++..
T Consensus 39 ~~~ll~G~~G~GKT~l~~~l~~~~ 62 (226)
T 2chg_A 39 PHLLFSGPPGTGKTATAIALARDL 62 (226)
T ss_dssp CCEEEECSTTSSHHHHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHH
Confidence 349999999999999999887754
No 251
>1z2a_A RAS-related protein RAB-23; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 1.90A {Mus musculus} SCOP: c.37.1.8 PDB: 1z22_A*
Probab=85.48 E-value=0.44 Score=39.62 Aligned_cols=22 Identities=9% Similarity=0.369 Sum_probs=19.5
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+..+
T Consensus 7 ~i~v~G~~~~GKssl~~~l~~~ 28 (168)
T 1z2a_A 7 KMVVVGNGAVGKSSMIQRYCKG 28 (168)
T ss_dssp EEEEECSTTSSHHHHHHHHHHC
T ss_pred EEEEECcCCCCHHHHHHHHHcC
Confidence 6899999999999999888653
No 252
>3u61_B DNA polymerase accessory protein 44; AAA+, ATP hydrolase, clamp loader, sliding clamp, primer-TEM DNA, DNA binding protein-DNA complex; HET: DNA ADP 08T; 3.20A {Enterobacteria phage T4} PDB: 3u5z_B* 3u60_B*
Probab=85.47 E-value=1.7 Score=41.10 Aligned_cols=24 Identities=25% Similarity=0.481 Sum_probs=18.5
Q ss_pred eeeeecC-CCCChhhhHHHHHHHhc
Q 015796 162 KIPLFSA-AGLPHNEIAAQICRQAG 185 (400)
Q Consensus 162 r~~I~g~-~G~GKt~L~~~i~~~~~ 185 (400)
...+++| +|+|||+++..+++..+
T Consensus 49 ~~~L~~G~~G~GKT~la~~la~~l~ 73 (324)
T 3u61_B 49 HIILHSPSPGTGKTTVAKALCHDVN 73 (324)
T ss_dssp SEEEECSSTTSSHHHHHHHHHHHTT
T ss_pred eEEEeeCcCCCCHHHHHHHHHHHhC
Confidence 4555555 99999999999887653
No 253
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A
Probab=85.45 E-value=0.42 Score=45.30 Aligned_cols=23 Identities=13% Similarity=0.299 Sum_probs=20.3
Q ss_pred eeeecCCCCChhhhHHHHHHHhc
Q 015796 163 IPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 163 ~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
+++.|++|+|||+|+..|++..+
T Consensus 39 lLl~GppGtGKT~la~aiA~~l~ 61 (293)
T 3t15_A 39 LGIWGGKGQGKSFQCELVFRKMG 61 (293)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 57779999999999999988765
No 254
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster}
Probab=85.42 E-value=0.5 Score=44.11 Aligned_cols=26 Identities=15% Similarity=0.310 Sum_probs=22.8
Q ss_pred CceeeeecCCCCChhhhHHHHHHHhc
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
+.-++|.|++|+|||+|+..+++..+
T Consensus 54 ~~~vll~Gp~GtGKT~la~~la~~~~ 79 (297)
T 3b9p_A 54 AKGLLLFGPPGNGKTLLARAVATECS 79 (297)
T ss_dssp CSEEEEESSSSSCHHHHHHHHHHHTT
T ss_pred CCeEEEECcCCCCHHHHHHHHHHHhC
Confidence 56789999999999999999987654
No 255
>1ni3_A YCHF GTPase, YCHF GTP-binding protein; structural genomics, GTP1OBG, PSI, protein structure initiative; 2.80A {Schizosaccharomyces pombe} SCOP: c.37.1.8 d.15.10.2
Probab=85.38 E-value=0.44 Score=47.64 Aligned_cols=27 Identities=7% Similarity=0.086 Sum_probs=24.4
Q ss_pred eeccCceeeeecCCCCChhhhHHHHHH
Q 015796 156 SIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 156 pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
.+.+|.+++|.|.+|+|||||+.+|+.
T Consensus 16 ~v~~g~~vgiVG~pnaGKSTL~n~Ltg 42 (392)
T 1ni3_A 16 RPGNNLKTGIVGMPNVGKSTFFRAITK 42 (392)
T ss_dssp SSSSCCEEEEEECSSSSHHHHHHHHHH
T ss_pred cccCCCEEEEECCCCCCHHHHHHHHHC
Confidence 456889999999999999999999976
No 256
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=85.35 E-value=0.39 Score=40.28 Aligned_cols=19 Identities=21% Similarity=0.226 Sum_probs=17.3
Q ss_pred eeeeecCCCCChhhhHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQI 180 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i 180 (400)
-+.|.|++|+||||++..+
T Consensus 3 ~I~l~G~~GsGKsT~a~~L 21 (179)
T 3lw7_A 3 VILITGMPGSGKSEFAKLL 21 (179)
T ss_dssp EEEEECCTTSCHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 3789999999999999988
No 257
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=85.35 E-value=1 Score=45.59 Aligned_cols=23 Identities=9% Similarity=0.286 Sum_probs=21.4
Q ss_pred eeeecCCCCChhhhHHHHHHHhc
Q 015796 163 IPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 163 ~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
+++.||+|+|||.|+..+|...+
T Consensus 209 iLL~GPPGtGKT~lakAiA~~~~ 231 (428)
T 4b4t_K 209 VLLYGPPGTGKTMLVKAVANSTK 231 (428)
T ss_dssp EEEESCTTTTHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 89999999999999999998876
No 258
>2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ...
Probab=85.19 E-value=0.45 Score=39.17 Aligned_cols=22 Identities=18% Similarity=0.409 Sum_probs=19.6
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+..+
T Consensus 5 ~i~v~G~~~~GKssl~~~l~~~ 26 (166)
T 2ce2_X 5 KLVVVGAGGVGKSALTIQLIQN 26 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 7899999999999999888654
No 259
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A*
Probab=85.19 E-value=0.44 Score=45.96 Aligned_cols=24 Identities=21% Similarity=0.311 Sum_probs=21.6
Q ss_pred ceeeeecCCCCChhhhHHHHHHHh
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+.+++.|++|+|||||+..|+...
T Consensus 52 ~~~ll~Gp~G~GKTTLa~~ia~~l 75 (334)
T 1in4_A 52 DHVLLAGPPGLGKTTLAHIIASEL 75 (334)
T ss_dssp CCEEEESSTTSSHHHHHHHHHHHH
T ss_pred CeEEEECCCCCcHHHHHHHHHHHh
Confidence 568999999999999999998765
No 260
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=85.19 E-value=1.3 Score=44.86 Aligned_cols=24 Identities=17% Similarity=0.351 Sum_probs=21.7
Q ss_pred eeeeecCCCCChhhhHHHHHHHhc
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
-++++||+|+|||.|+..+|...+
T Consensus 217 GvLL~GPPGtGKTllAkAiA~e~~ 240 (437)
T 4b4t_L 217 GVLLYGPPGTGKTLLAKAVAATIG 240 (437)
T ss_dssp EEEEESCTTSSHHHHHHHHHHHHT
T ss_pred eEEEECCCCCcHHHHHHHHHHHhC
Confidence 389999999999999999998876
No 261
>2wjg_A FEOB, ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GDP; 2.20A {Methanocaldococcus jannaschii}
Probab=85.15 E-value=0.46 Score=40.59 Aligned_cols=22 Identities=14% Similarity=0.209 Sum_probs=19.6
Q ss_pred ceeeeecCCCCChhhhHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~ 182 (400)
-|+.++|.+|+|||+|+..++.
T Consensus 8 ~~i~lvG~~gvGKStL~~~l~~ 29 (188)
T 2wjg_A 8 YEIALIGNPNVGKSTIFNALTG 29 (188)
T ss_dssp EEEEEECSTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHhC
Confidence 4789999999999999988864
No 262
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=85.15 E-value=0.48 Score=41.10 Aligned_cols=23 Identities=9% Similarity=0.001 Sum_probs=19.8
Q ss_pred eeeeecCCCCChhhhHHHHHHHh
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+.|.|++|+||||++..++..-
T Consensus 2 ~I~l~G~~GsGKsT~~~~L~~~l 24 (197)
T 2z0h_A 2 FITFEGIDGSGKSTQIQLLAQYL 24 (197)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 37899999999999999987653
No 263
>1kao_A RAP2A; GTP-binding protein, small G protein, GDP, RAS; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2rap_A* 3rap_R*
Probab=85.06 E-value=0.47 Score=39.18 Aligned_cols=22 Identities=14% Similarity=0.374 Sum_probs=19.5
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+..+
T Consensus 5 ~i~v~G~~~~GKSsli~~l~~~ 26 (167)
T 1kao_A 5 KVVVLGSGGVGKSALTVQFVTG 26 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 7899999999999999887654
No 264
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus}
Probab=84.90 E-value=0.54 Score=39.77 Aligned_cols=23 Identities=13% Similarity=0.167 Sum_probs=20.3
Q ss_pred eeeeecCCCCChhhhHHHHHHHh
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
++.|.|++|+||||++..+++.-
T Consensus 2 ~I~l~G~~GsGKsT~a~~L~~~l 24 (168)
T 2pt5_A 2 RIYLIGFMCSGKSTVGSLLSRSL 24 (168)
T ss_dssp EEEEESCTTSCHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHh
Confidence 68899999999999999988753
No 265
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae}
Probab=84.90 E-value=0.4 Score=44.27 Aligned_cols=29 Identities=17% Similarity=0.031 Sum_probs=24.9
Q ss_pred eeccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 156 SIARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 156 pigkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+..++..+.+.|++|+||||++..+++.-
T Consensus 28 ~~~~~~~i~l~G~~GsGKSTla~~L~~~l 56 (253)
T 2p5t_B 28 SSKQPIAILLGGQSGAGKTTIHRIKQKEF 56 (253)
T ss_dssp CCSSCEEEEEESCGGGTTHHHHHHHHHHT
T ss_pred cccCCeEEEEECCCCCCHHHHHHHHHHhc
Confidence 45667789999999999999999988754
No 266
>1r8s_A ADP-ribosylation factor 1; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Bos taurus} SCOP: c.37.1.8 PDB: 1re0_A* 1s9d_A* 1u81_A* 1r8q_A* 1rrf_A* 1rrg_A* 1hur_A* 1o3y_A* 1j2j_A* 2j59_A* 1mr3_F* 2k5u_A* 3lrp_A* 3tjz_A* 3rd1_A* 2ksq_A* 2a5d_A* 2a5f_A* 2j5x_A* 1e0s_A* ...
Probab=84.86 E-value=0.56 Score=38.93 Aligned_cols=22 Identities=9% Similarity=0.060 Sum_probs=19.4
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+..+
T Consensus 2 ki~~~G~~~~GKssl~~~l~~~ 23 (164)
T 1r8s_A 2 RILMVGLDAAGKTTILYKLKLG 23 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 6899999999999999888654
No 267
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=84.81 E-value=3 Score=39.74 Aligned_cols=27 Identities=15% Similarity=0.044 Sum_probs=22.7
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+|..+++.|..|+||||++..++...
T Consensus 96 ~~~~vi~i~G~~G~GKTT~~~~la~~~ 122 (297)
T 1j8m_F 96 KIPYVIMLVGVQGTGKTTTAGKLAYFY 122 (297)
T ss_dssp SSSEEEEEECSSCSSTTHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 358889999999999999998887553
No 268
>2nzj_A GTP-binding protein REM 1; GDP/GTP binding, GTP hydrolysis, RAD and GEM like GTP protein 1, structural genomics; HET: GDP; 2.50A {Homo sapiens}
Probab=84.64 E-value=0.51 Score=39.56 Aligned_cols=21 Identities=14% Similarity=0.377 Sum_probs=18.7
Q ss_pred eeeeecCCCCChhhhHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~ 182 (400)
|+.++|.+|+|||+|+..+..
T Consensus 6 ki~i~G~~~vGKSsl~~~l~~ 26 (175)
T 2nzj_A 6 RVVLLGDPGVGKTSLASLFAG 26 (175)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCccHHHHHHHHhc
Confidence 789999999999999988753
No 269
>3r20_A Cytidylate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ADP, DCMP, D transferase; 2.00A {Mycobacterium smegmatis} SCOP: c.37.1.0 PDB: 3r8c_A 4die_A*
Probab=84.60 E-value=0.53 Score=43.60 Aligned_cols=25 Identities=16% Similarity=0.291 Sum_probs=21.3
Q ss_pred ceeeeecCCCCChhhhHHHHHHHhc
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
-.+.|.|++|+||||++..|++.-+
T Consensus 10 ~~i~i~G~~GsGKsTla~~la~~lg 34 (233)
T 3r20_A 10 LVVAVDGPAGTGKSSVSRGLARALG 34 (233)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHT
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhC
Confidence 3689999999999999999876543
No 270
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens}
Probab=84.59 E-value=2.3 Score=41.66 Aligned_cols=26 Identities=15% Similarity=0.326 Sum_probs=22.5
Q ss_pred CceeeeecCCCCChhhhHHHHHHHhc
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
+.-++|.|++|+|||+|+..|++..+
T Consensus 148 ~~~vLL~GppGtGKT~la~aia~~~~ 173 (389)
T 3vfd_A 148 ARGLLLFGPPGNGKTMLAKAVAAESN 173 (389)
T ss_dssp CSEEEEESSTTSCHHHHHHHHHHHTT
T ss_pred CceEEEECCCCCCHHHHHHHHHHhhc
Confidence 45699999999999999999987654
No 271
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20
Probab=84.58 E-value=0.51 Score=43.19 Aligned_cols=23 Identities=17% Similarity=0.260 Sum_probs=20.5
Q ss_pred eeeecCCCCChhhhHHHHHHHhc
Q 015796 163 IPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 163 ~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
++|.|++|+|||+|+..+++..+
T Consensus 48 vll~G~~GtGKT~la~~la~~~~ 70 (257)
T 1lv7_A 48 VLMVGPPGTGKTLLAKAIAGEAK 70 (257)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHT
T ss_pred EEEECcCCCCHHHHHHHHHHHcC
Confidence 89999999999999999887643
No 272
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1
Probab=84.56 E-value=0.54 Score=42.11 Aligned_cols=27 Identities=11% Similarity=-0.028 Sum_probs=22.7
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
++..+.|.|++|+||||+...+++.-+
T Consensus 4 ~~~~I~l~G~~GsGKsT~~~~La~~l~ 30 (222)
T 1zak_A 4 DPLKVMISGAPASGKGTQCELIKTKYQ 30 (222)
T ss_dssp CSCCEEEEESTTSSHHHHHHHHHHHHC
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 456789999999999999999986643
No 273
>1u8z_A RAS-related protein RAL-A; GNP, GTP, GMPPNP, GPPNHP, GDP, GTPase, signaling protein; HET: GDP; 1.50A {Saguinus oedipus} SCOP: c.37.1.8 PDB: 1u8y_A* 1u90_A* 1uad_A* 1zc3_A* 1zc4_A* 2kwi_A* 2ke5_A*
Probab=84.56 E-value=0.51 Score=38.97 Aligned_cols=22 Identities=14% Similarity=0.320 Sum_probs=19.5
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+...
T Consensus 6 ~i~v~G~~~~GKssl~~~l~~~ 27 (168)
T 1u8z_A 6 KVIMVGSGGVGKSALTLQFMYD 27 (168)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 7899999999999999887653
No 274
>1z08_A RAS-related protein RAB-21; RAB GTPase, vesicular trafficking, protein transport; HET: GNP; 1.80A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ot3_B 1yzu_A* 1z0i_A 1yzt_A*
Probab=84.47 E-value=0.51 Score=39.38 Aligned_cols=22 Identities=14% Similarity=0.395 Sum_probs=19.5
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+..+
T Consensus 8 ~i~v~G~~~~GKssli~~l~~~ 29 (170)
T 1z08_A 8 KVVLLGEGCVGKTSLVLRYCEN 29 (170)
T ss_dssp EEEEECCTTSCHHHHHHHHHHC
T ss_pred EEEEECcCCCCHHHHHHHHHcC
Confidence 6899999999999999888654
No 275
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=84.44 E-value=0.57 Score=40.33 Aligned_cols=23 Identities=13% Similarity=0.073 Sum_probs=20.0
Q ss_pred eeeeecCCCCChhhhHHHHHHHh
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.++|.|++|+||||++..+++.-
T Consensus 2 ~I~l~G~~GsGKsT~~~~L~~~l 24 (195)
T 2pbr_A 2 LIAFEGIDGSGKTTQAKKLYEYL 24 (195)
T ss_dssp EEEEECSTTSCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 47899999999999999988753
No 276
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=84.40 E-value=0.53 Score=41.23 Aligned_cols=24 Identities=13% Similarity=0.178 Sum_probs=20.8
Q ss_pred eeeeecCCCCChhhhHHHHHHHhc
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
-+.|.|++|+|||+|+..+++...
T Consensus 47 ~~ll~G~~G~GKT~l~~~~~~~~~ 70 (250)
T 1njg_A 47 AYLFSGTRGVGKTSIARLLAKGLN 70 (250)
T ss_dssp EEEEECSTTSCHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhc
Confidence 589999999999999999887653
No 277
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=84.39 E-value=0.7 Score=46.79 Aligned_cols=24 Identities=13% Similarity=0.191 Sum_probs=21.8
Q ss_pred eeeeecCCCCChhhhHHHHHHHhc
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
-++++||+|+|||.|+..+|...+
T Consensus 217 GvLLyGPPGTGKTllAkAiA~e~~ 240 (434)
T 4b4t_M 217 GALMYGPPGTGKTLLARACAAQTN 240 (434)
T ss_dssp EEEEESCTTSSHHHHHHHHHHHHT
T ss_pred eeEEECcCCCCHHHHHHHHHHHhC
Confidence 389999999999999999998876
No 278
>1tq4_A IIGP1, interferon-inducible GTPase; interferon gamma, dimer, immunology, signaling protein; HET: GDP; 1.95A {Mus musculus} SCOP: c.37.1.8 PDB: 1tqd_A* 1tq6_A* 1tpz_A* 1tq2_A*
Probab=84.31 E-value=0.35 Score=48.71 Aligned_cols=21 Identities=5% Similarity=0.143 Sum_probs=19.9
Q ss_pred eeeeecCCCCChhhhHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~ 182 (400)
.++|.|++|+|||||+..|+.
T Consensus 71 ~valvG~nGaGKSTLln~L~G 91 (413)
T 1tq4_A 71 NVAVTGETGSGKSSFINTLRG 91 (413)
T ss_dssp EEEEEECTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCcHHHHHHHHhC
Confidence 999999999999999999875
No 279
>1ek0_A Protein (GTP-binding protein YPT51); vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase; HET: MHO GNP GDP; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=84.25 E-value=0.54 Score=39.02 Aligned_cols=22 Identities=18% Similarity=0.324 Sum_probs=19.5
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+..+
T Consensus 5 ~i~v~G~~~~GKssli~~l~~~ 26 (170)
T 1ek0_A 5 KLVLLGEAAVGKSSIVLRFVSN 26 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 7899999999999999887654
No 280
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=84.21 E-value=0.55 Score=39.86 Aligned_cols=25 Identities=20% Similarity=0.360 Sum_probs=21.1
Q ss_pred ceeeeecCCCCChhhhHHHHHHHhc
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
..+.|.|++|+||||++..+++.-+
T Consensus 3 ~~I~l~G~~GsGKsT~a~~La~~lg 27 (173)
T 1e6c_A 3 EPIFMVGARGCGMTTVGRELARALG 27 (173)
T ss_dssp CCEEEESCTTSSHHHHHHHHHHHHT
T ss_pred ceEEEECCCCCCHHHHHHHHHHHhC
Confidence 3588999999999999999987543
No 281
>1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A*
Probab=84.14 E-value=0.57 Score=41.72 Aligned_cols=23 Identities=22% Similarity=0.125 Sum_probs=20.3
Q ss_pred eeeeecCCCCChhhhHHHHHHHh
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
++.|.|++|+||||++..+++.-
T Consensus 2 ~I~l~G~~GsGKsT~a~~L~~~~ 24 (214)
T 1e4v_A 2 RIILLGAPVAGKGTQAQFIMEKY 24 (214)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 58899999999999999988654
No 282
>1c1y_A RAS-related protein RAP-1A; GTP-binding proteins, protein-protein complex, effectors, signaling protein; HET: GTP; 1.90A {Homo sapiens} SCOP: c.37.1.8 PDB: 3kuc_A* 1gua_A* 3cf6_R* 3brw_D*
Probab=84.07 E-value=0.55 Score=38.93 Aligned_cols=22 Identities=14% Similarity=0.395 Sum_probs=19.5
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+..+
T Consensus 5 ki~v~G~~~~GKssli~~l~~~ 26 (167)
T 1c1y_A 5 KLVVLGSGGVGKSALTVQFVQG 26 (167)
T ss_dssp EEEEECSTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 7899999999999999888653
No 283
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=84.06 E-value=0.58 Score=40.74 Aligned_cols=24 Identities=17% Similarity=0.072 Sum_probs=21.0
Q ss_pred CceeeeecCCCCChhhhHHHHHHH
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
-..++|.|++|+||||+...+++.
T Consensus 8 ~~~I~i~G~~GsGKST~~~~La~~ 31 (203)
T 1uf9_A 8 PIIIGITGNIGSGKSTVAALLRSW 31 (203)
T ss_dssp CEEEEEEECTTSCHHHHHHHHHHT
T ss_pred ceEEEEECCCCCCHHHHHHHHHHC
Confidence 346899999999999999999875
No 284
>1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A*
Probab=84.04 E-value=0.65 Score=42.09 Aligned_cols=26 Identities=15% Similarity=0.339 Sum_probs=22.2
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHh
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
++.++.|.|++|+||||++..|++.-
T Consensus 15 ~~~~I~l~G~~GsGKsT~a~~La~~l 40 (233)
T 1ak2_A 15 KGVRAVLLGPPGAGKGTQAPKLAKNF 40 (233)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHh
Confidence 34679999999999999999998654
No 285
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus}
Probab=83.92 E-value=0.3 Score=42.95 Aligned_cols=24 Identities=0% Similarity=0.052 Sum_probs=20.8
Q ss_pred ceeeeecCCCCChhhhHHHHHHHh
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+.++|.|++|+|||||+..|++.-
T Consensus 3 ~~v~IvG~SGsGKSTL~~~L~~~~ 26 (171)
T 2f1r_A 3 LILSIVGTSDSGKTTLITRMMPIL 26 (171)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHh
Confidence 578999999999999998887653
No 286
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C*
Probab=83.78 E-value=2.2 Score=39.95 Aligned_cols=25 Identities=28% Similarity=0.533 Sum_probs=21.7
Q ss_pred ceeeeecCCCCChhhhHHHHHHHhc
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
.-++|.|++|+|||+|+..+++..+
T Consensus 39 ~~vll~G~~GtGKT~la~~i~~~~~ 63 (324)
T 1hqc_A 39 EHLLLFGPPGLGKTTLAHVIAHELG 63 (324)
T ss_dssp CCCEEECCTTCCCHHHHHHHHHHHT
T ss_pred CcEEEECCCCCCHHHHHHHHHHHhC
Confidence 5689999999999999999887653
No 287
>1g16_A RAS-related protein SEC4; G protein RAB, signaling protein, endocytosis/exocytosis complex; HET: GDP; 1.80A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1g17_A* 2ocy_C 2eqb_A
Probab=83.72 E-value=0.56 Score=39.01 Aligned_cols=21 Identities=19% Similarity=0.335 Sum_probs=18.9
Q ss_pred eeeeecCCCCChhhhHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~ 182 (400)
|+.++|.+|+|||+|+..+..
T Consensus 5 ~i~v~G~~~~GKssli~~l~~ 25 (170)
T 1g16_A 5 KILLIGDSGVGKSCLLVRFVE 25 (170)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHHh
Confidence 689999999999999988764
No 288
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=83.67 E-value=0.45 Score=54.53 Aligned_cols=32 Identities=16% Similarity=0.319 Sum_probs=28.1
Q ss_pred eeeeeeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 152 DVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 152 D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|.=+.+-+|++++|.|++|+|||||+..|.+.
T Consensus 1051 ~vsl~i~~Ge~v~ivG~sGsGKSTl~~~l~g~ 1082 (1284)
T 3g5u_A 1051 GLSLEVKKGQTLALVGSSGCGKSTVVQLLERF 1082 (1284)
T ss_dssp SCCEEECSSSEEEEECSSSTTHHHHHHHHTTS
T ss_pred ceeEEEcCCCEEEEECCCCCCHHHHHHHHhcC
Confidence 34478999999999999999999999998763
No 289
>1wms_A RAB-9, RAB9, RAS-related protein RAB-9A; GTPase, protein transport; HET: GDP; 1.25A {Homo sapiens} SCOP: c.37.1.8 PDB: 1s8f_A* 1yzl_A* 2ocb_A*
Probab=83.65 E-value=0.58 Score=39.37 Aligned_cols=22 Identities=14% Similarity=0.333 Sum_probs=19.4
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+..+
T Consensus 9 ~i~v~G~~~~GKSsli~~l~~~ 30 (177)
T 1wms_A 9 KVILLGDGGVGKSSLMNRYVTN 30 (177)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 6899999999999999887643
No 290
>1r2q_A RAS-related protein RAB-5A; GTPase, GNP, atomic resolution, protein transport; HET: GNP; 1.05A {Homo sapiens} SCOP: c.37.1.8 PDB: 1n6h_A* 1tu4_A* 1tu3_A* 1n6k_A* 1n6i_A* 1n6l_A* 1n6o_A* 1n6p_A* 1n6n_A* 1n6r_A* 3mjh_A* 1z0d_A* 1huq_A* 2hei_A* 1z07_A*
Probab=83.63 E-value=0.59 Score=38.75 Aligned_cols=22 Identities=9% Similarity=0.305 Sum_probs=19.4
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+..+
T Consensus 8 ~i~v~G~~~~GKssli~~l~~~ 29 (170)
T 1r2q_A 8 KLVLLGESAVGKSSLVLRFVKG 29 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 6899999999999999888653
No 291
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=83.50 E-value=0.66 Score=41.42 Aligned_cols=22 Identities=9% Similarity=0.125 Sum_probs=19.9
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
.++|.|+.|+||||+..+++..
T Consensus 14 iIgltG~~GSGKSTva~~L~~~ 35 (192)
T 2grj_A 14 VIGVTGKIGTGKSTVCEILKNK 35 (192)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHh
Confidence 5899999999999999998875
No 292
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D*
Probab=83.47 E-value=0.66 Score=44.59 Aligned_cols=26 Identities=19% Similarity=0.369 Sum_probs=22.9
Q ss_pred CceeeeecCCCCChhhhHHHHHHHhc
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
|+-++|.|++|+|||+|+..+++...
T Consensus 70 ~~~vLl~GppGtGKT~la~~la~~l~ 95 (368)
T 3uk6_A 70 GRAVLIAGQPGTGKTAIAMGMAQALG 95 (368)
T ss_dssp TCEEEEEESTTSSHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhc
Confidence 56799999999999999999987754
No 293
>3q85_A GTP-binding protein REM 2; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.76A {Mus musculus} SCOP: c.37.1.8 PDB: 4aii_A*
Probab=83.46 E-value=0.62 Score=38.85 Aligned_cols=20 Identities=20% Similarity=0.375 Sum_probs=18.2
Q ss_pred eeeeecCCCCChhhhHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQIC 181 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~ 181 (400)
|+.++|.+|+|||+|+..+.
T Consensus 4 ki~ivG~~~~GKSsli~~l~ 23 (169)
T 3q85_A 4 KVMLVGESGVGKSTLAGTFG 23 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHH
Confidence 78999999999999998875
No 294
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=83.45 E-value=0.47 Score=54.36 Aligned_cols=34 Identities=15% Similarity=0.251 Sum_probs=28.9
Q ss_pred ee-eeeeeeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 150 TI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 150 aI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
++ |.=+.+-+|++++|.|++|+|||||++.|.+.
T Consensus 405 vL~~isl~i~~G~~~~ivG~sGsGKSTl~~ll~g~ 439 (1284)
T 3g5u_A 405 ILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRL 439 (1284)
T ss_dssp SEEEEEEEECTTCEEEEECCSSSSHHHHHHHTTTS
T ss_pred ceecceEEEcCCCEEEEECCCCCCHHHHHHHHhCC
Confidence 44 34488999999999999999999999887653
No 295
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae}
Probab=83.41 E-value=0.59 Score=40.17 Aligned_cols=23 Identities=4% Similarity=0.059 Sum_probs=20.2
Q ss_pred ceeeeecCCCCChhhhHHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
-++.++|.+|+|||+|+..+...
T Consensus 49 ~~i~vvG~~g~GKSsll~~l~~~ 71 (193)
T 2ged_A 49 PSIIIAGPQNSGKTSLLTLLTTD 71 (193)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHhcC
Confidence 47999999999999999888654
No 296
>2fn4_A P23, RAS-related protein R-RAS; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ery_A*
Probab=83.38 E-value=0.58 Score=39.33 Aligned_cols=23 Identities=13% Similarity=0.348 Sum_probs=20.2
Q ss_pred ceeeeecCCCCChhhhHHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
-|+.++|.+|+|||+|+..+...
T Consensus 10 ~~i~v~G~~~~GKssli~~l~~~ 32 (181)
T 2fn4_A 10 HKLVVVGGGGVGKSALTIQFIQS 32 (181)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHHhC
Confidence 37899999999999999888754
No 297
>1z0j_A RAB-22, RAS-related protein RAB-22A; RAB GTPase, RAB22 GTPase, rabenosyn, endosomal trafficking; HET: GTP; 1.32A {Mus musculus} SCOP: c.37.1.8 PDB: 1yvd_A*
Probab=83.35 E-value=0.61 Score=38.76 Aligned_cols=22 Identities=18% Similarity=0.333 Sum_probs=19.5
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+...
T Consensus 8 ~i~v~G~~~~GKSsli~~l~~~ 29 (170)
T 1z0j_A 8 KVCLLGDTGVGKSSIMWRFVED 29 (170)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECcCCCCHHHHHHHHHcC
Confidence 6899999999999999888654
No 298
>1ky3_A GTP-binding protein YPT7P; vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase, endocytosis/exocytosis complex; HET: GDP; 1.35A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ky2_A*
Probab=83.34 E-value=0.61 Score=39.26 Aligned_cols=22 Identities=9% Similarity=0.321 Sum_probs=19.4
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+...
T Consensus 10 ~i~v~G~~~~GKSsli~~l~~~ 31 (182)
T 1ky3_A 10 KVIILGDSGVGKTSLMHRYVND 31 (182)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 7899999999999999887653
No 299
>3bc1_A RAS-related protein RAB-27A; RAB27, GTPase, RAB, signaling protein, GDPNP, SLP2A, exophil GTP-binding, lipoprotein, membrane, methylation; HET: GNP; 1.80A {Mus musculus} PDB: 2iey_A* 2if0_A* 2zet_A*
Probab=83.27 E-value=0.61 Score=39.63 Aligned_cols=22 Identities=14% Similarity=0.182 Sum_probs=19.5
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+..+
T Consensus 13 ki~v~G~~~~GKSsli~~l~~~ 34 (195)
T 3bc1_A 13 KFLALGDSGVGKTSVLYQYTDG 34 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 7899999999999999888653
No 300
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli}
Probab=83.18 E-value=0.6 Score=39.11 Aligned_cols=26 Identities=15% Similarity=0.084 Sum_probs=21.6
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHh
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+.-++|.|++|+|||+++..|.+.+
T Consensus 23 ~~~~vll~G~~GtGKt~lA~~i~~~~ 48 (145)
T 3n70_A 23 TDIAVWLYGAPGTGRMTGARYLHQFG 48 (145)
T ss_dssp CCSCEEEESSTTSSHHHHHHHHHHSS
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHhC
Confidence 34568999999999999998887654
No 301
>3q72_A GTP-binding protein RAD; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.66A {Homo sapiens} SCOP: c.37.1.8 PDB: 3q7p_A* 3q7q_A* 2gjs_A* 2dpx_A*
Probab=83.14 E-value=0.59 Score=38.85 Aligned_cols=20 Identities=25% Similarity=0.386 Sum_probs=18.0
Q ss_pred eeeeecCCCCChhhhHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQIC 181 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~ 181 (400)
|+.++|.+|+|||+|+..+.
T Consensus 4 ki~~vG~~~~GKSsli~~l~ 23 (166)
T 3q72_A 4 KVLLLGAPGVGKSALARIFG 23 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHc
Confidence 78999999999999998764
No 302
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii}
Probab=83.11 E-value=0.57 Score=45.48 Aligned_cols=22 Identities=5% Similarity=0.013 Sum_probs=19.3
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
-++|.|++|+|||||+..|...
T Consensus 94 iigI~GpsGSGKSTl~~~L~~l 115 (321)
T 3tqc_A 94 IIGIAGSVAVGKSTTSRVLKAL 115 (321)
T ss_dssp EEEEECCTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHH
Confidence 4899999999999999888654
No 303
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=83.08 E-value=0.73 Score=39.54 Aligned_cols=24 Identities=17% Similarity=0.225 Sum_probs=20.7
Q ss_pred ceeeeecCCCCChhhhHHHHHHHh
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
..+.|.|++|+||||++..+++.-
T Consensus 7 ~~I~l~G~~GsGKsT~~~~L~~~l 30 (194)
T 1qf9_A 7 NVVFVLGGPGSGKGTQCANIVRDF 30 (194)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHh
Confidence 468999999999999999987653
No 304
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=83.06 E-value=0.7 Score=44.10 Aligned_cols=27 Identities=19% Similarity=0.294 Sum_probs=23.6
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+|+.+++.|+.|+||||++..|+...
T Consensus 103 ~~g~vi~lvG~~GsGKTTl~~~LA~~l 129 (296)
T 2px0_A 103 IHSKYIVLFGSTGAGKTTTLAKLAAIS 129 (296)
T ss_dssp CCSSEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHHH
Confidence 478999999999999999998887553
No 305
>2erx_A GTP-binding protein DI-RAS2; GTP hydrolysis, transport protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8
Probab=83.02 E-value=0.66 Score=38.55 Aligned_cols=22 Identities=14% Similarity=0.484 Sum_probs=19.5
Q ss_pred ceeeeecCCCCChhhhHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~ 182 (400)
-|+.++|.+|+|||+|+..+..
T Consensus 4 ~~i~v~G~~~~GKssli~~l~~ 25 (172)
T 2erx_A 4 YRVAVFGAGGVGKSSLVLRFVK 25 (172)
T ss_dssp EEEEEECCTTSSHHHHHHHHHT
T ss_pred eEEEEECCCCCCHHHHHHHHHc
Confidence 4789999999999999988764
No 306
>1upt_A ARL1, ADP-ribosylation factor-like protein 1; hydrolase/protein-binding, complex (GTPase/golgin), golgin-245, GRIP, golgin, GTPase, G-protein; HET: GTP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1r4a_A*
Probab=82.89 E-value=0.66 Score=38.68 Aligned_cols=24 Identities=17% Similarity=0.228 Sum_probs=20.5
Q ss_pred cCceeeeecCCCCChhhhHHHHHH
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
+--|+.++|.+|+|||+|+..+..
T Consensus 6 ~~~~i~v~G~~~~GKssl~~~l~~ 29 (171)
T 1upt_A 6 REMRILILGLDGAGKTTILYRLQV 29 (171)
T ss_dssp SCEEEEEECSTTSSHHHHHHHHHH
T ss_pred CccEEEEECCCCCCHHHHHHHHhc
Confidence 345799999999999999988864
No 307
>1z0f_A RAB14, member RAS oncogene family; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 2.15A {Homo sapiens} SCOP: c.37.1.8 PDB: 2aed_A* 4drz_A*
Probab=82.79 E-value=0.67 Score=38.89 Aligned_cols=22 Identities=14% Similarity=0.218 Sum_probs=19.6
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+..+
T Consensus 17 ~i~v~G~~~~GKSsli~~l~~~ 38 (179)
T 1z0f_A 17 KYIIIGDMGVGKSCLLHQFTEK 38 (179)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 6899999999999999888654
No 308
>4dsu_A GTPase KRAS, isoform 2B; small G-protein, signaling, hydrolase; HET: GDP; 1.70A {Homo sapiens} PDB: 4dsn_A* 4dst_A* 4dso_A*
Probab=82.76 E-value=0.66 Score=39.40 Aligned_cols=22 Identities=18% Similarity=0.397 Sum_probs=19.6
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+..+
T Consensus 6 ki~v~G~~~~GKSsli~~l~~~ 27 (189)
T 4dsu_A 6 KLVVVGADGVGKSALTIQLIQN 27 (189)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 6899999999999999888754
No 309
>3ihw_A Centg3; RAS, centaurin, GTPase, structural genomics, structural genomics consortium, SGC, alternative splicing, ANK repeat, cytoplasm, GTP-binding; 1.92A {Homo sapiens} SCOP: c.37.1.0
Probab=82.75 E-value=0.64 Score=40.20 Aligned_cols=23 Identities=4% Similarity=0.050 Sum_probs=19.8
Q ss_pred ceeeeecCCCCChhhhHHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
-|+.|+|.+|+|||+|+..+..+
T Consensus 21 ~ki~ivG~~~vGKSsL~~~~~~~ 43 (184)
T 3ihw_A 21 LKVGIVGNLSSGKSALVHRYLTG 43 (184)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHhcC
Confidence 37999999999999999877654
No 310
>4b4t_H 26S protease regulatory subunit 7 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=82.73 E-value=1.9 Score=44.13 Aligned_cols=24 Identities=17% Similarity=0.270 Sum_probs=21.8
Q ss_pred eeeeecCCCCChhhhHHHHHHHhc
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
-+++.|++|+|||.|+..+|...+
T Consensus 245 GILLyGPPGTGKTlLAkAiA~e~~ 268 (467)
T 4b4t_H 245 GILLYGPPGTGKTLCARAVANRTD 268 (467)
T ss_dssp EEEECSCTTSSHHHHHHHHHHHHT
T ss_pred ceEeeCCCCCcHHHHHHHHHhccC
Confidence 389999999999999999998876
No 311
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=82.64 E-value=0.68 Score=48.91 Aligned_cols=30 Identities=7% Similarity=0.244 Sum_probs=24.8
Q ss_pred eeeeeccC-----ceeeeecCCCCChhhhHHHHHH
Q 015796 153 VMNSIARG-----QKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 153 ~l~pigkG-----qr~~I~g~~G~GKt~L~~~i~~ 182 (400)
.-+.+.+| +.++|.|++|+|||||+..|+.
T Consensus 366 vsl~v~~G~~~~GEiv~iiG~NGsGKSTLlk~l~G 400 (608)
T 3j16_B 366 FVLNVEEGEFSDSEILVMMGENGTGKTTLIKLLAG 400 (608)
T ss_dssp CEEEECCEECCTTCEEEEESCTTSSHHHHHHHHHT
T ss_pred eEEEEecCccccceEEEEECCCCCcHHHHHHHHhc
Confidence 44556666 7899999999999999999864
No 312
>2hxs_A RAB-26, RAS-related protein RAB-28; GTPase, signaling protein; HET: G3D; 1.10A {Homo sapiens} PDB: 2hy4_A* 3e5h_A*
Probab=82.53 E-value=0.66 Score=39.06 Aligned_cols=22 Identities=9% Similarity=0.217 Sum_probs=19.2
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+..+
T Consensus 8 ki~v~G~~~~GKssl~~~l~~~ 29 (178)
T 2hxs_A 8 KIVVLGDGASGKTSLTTCFAQE 29 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHGG
T ss_pred EEEEECcCCCCHHHHHHHHHhC
Confidence 6899999999999999887643
No 313
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A*
Probab=82.39 E-value=0.75 Score=43.02 Aligned_cols=25 Identities=8% Similarity=0.145 Sum_probs=21.2
Q ss_pred CceeeeecCCCCChhhhHHHHHHHh
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+.-++|.|++|+|||+|+..+++..
T Consensus 67 ~~~vll~G~~GtGKT~la~~la~~l 91 (309)
T 3syl_A 67 TLHMSFTGNPGTGKTTVALKMAGLL 91 (309)
T ss_dssp CCEEEEEECTTSSHHHHHHHHHHHH
T ss_pred CceEEEECCCCCCHHHHHHHHHHHH
Confidence 4459999999999999998877664
No 314
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=82.37 E-value=0.72 Score=41.16 Aligned_cols=21 Identities=10% Similarity=0.238 Sum_probs=17.9
Q ss_pred eeeecCCCCChhhhHHHHHHH
Q 015796 163 IPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 163 ~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+-|.||+|+|||||++.+...
T Consensus 4 IVi~GPSG~GK~Tl~~~L~~~ 24 (186)
T 1ex7_A 4 IVISGPSGTGKSTLLKKLFAE 24 (186)
T ss_dssp EEEECCTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHh
Confidence 468899999999999988654
No 315
>2y8e_A RAB-protein 6, GH09086P, RAB6; hydrolase, nucleotide binding, GTP binding; HET: GNP; 1.39A {Drosophila melanogaster} PDB: 3cwz_A* 1yzq_A* 2gil_A* 2e9s_A* 2fe4_A* 2ffq_A* 1d5c_A*
Probab=82.27 E-value=0.69 Score=38.78 Aligned_cols=23 Identities=4% Similarity=0.161 Sum_probs=19.9
Q ss_pred ceeeeecCCCCChhhhHHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
-|+.++|.+|+|||+|+..+...
T Consensus 15 ~~i~v~G~~~~GKssli~~l~~~ 37 (179)
T 2y8e_A 15 FKLVFLGEQSVGKTSLITRFMYD 37 (179)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHHcC
Confidence 37999999999999999887643
No 316
>3clv_A RAB5 protein, putative; malaria, GTPase, structural genomics, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.89A {Plasmodium falciparum}
Probab=82.24 E-value=0.7 Score=39.43 Aligned_cols=23 Identities=13% Similarity=0.280 Sum_probs=20.2
Q ss_pred ceeeeecCCCCChhhhHHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
=|++++|.+|+|||+|+..+...
T Consensus 8 ~ki~v~G~~~~GKSsli~~l~~~ 30 (208)
T 3clv_A 8 YKTVLLGESSVGKSSIVLRLTKD 30 (208)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHHhC
Confidence 37999999999999999888754
No 317
>3dz8_A RAS-related protein RAB-3B; GDP, GTPase, structural genomics consortium, SGC, cell GTP-binding, lipoprotein, membrane, methylation; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=82.19 E-value=0.78 Score=39.55 Aligned_cols=23 Identities=4% Similarity=0.156 Sum_probs=20.0
Q ss_pred eeeeecCCCCChhhhHHHHHHHh
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
|+.++|.+|+|||+|+..+....
T Consensus 25 ki~v~G~~~~GKSsli~~l~~~~ 47 (191)
T 3dz8_A 25 KLLIIGNSSVGKTSFLFRYADDT 47 (191)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHT
T ss_pred EEEEECCCCcCHHHHHHHHhcCC
Confidence 78999999999999998887543
No 318
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=82.14 E-value=0.83 Score=43.69 Aligned_cols=25 Identities=12% Similarity=0.296 Sum_probs=22.2
Q ss_pred CceeeeecCCCCChhhhHHHHHHHh
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
++-+.|.|++|+|||+|+..|++..
T Consensus 152 ~~~lll~G~~GtGKT~La~aia~~~ 176 (308)
T 2qgz_A 152 QKGLYLYGDMGIGKSYLLAAMAHEL 176 (308)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CceEEEECCCCCCHHHHHHHHHHHH
Confidence 6789999999999999998887764
No 319
>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A*
Probab=82.14 E-value=0.75 Score=46.27 Aligned_cols=27 Identities=7% Similarity=-0.087 Sum_probs=23.6
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+|+-++|.|+.|+|||||+..|+...
T Consensus 165 ~~ggii~I~GpnGSGKTTlL~allg~l 191 (418)
T 1p9r_A 165 RPHGIILVTGPTGSGKSTTLYAGLQEL 191 (418)
T ss_dssp SSSEEEEEECSTTSCHHHHHHHHHHHH
T ss_pred hcCCeEEEECCCCCCHHHHHHHHHhhc
Confidence 678899999999999999998877643
No 320
>2oil_A CATX-8, RAS-related protein RAB-25; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.30A {Homo sapiens}
Probab=82.13 E-value=0.72 Score=39.72 Aligned_cols=22 Identities=18% Similarity=0.454 Sum_probs=19.5
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|++++|.+|+|||+|+..+...
T Consensus 27 ki~v~G~~~~GKSsLi~~l~~~ 48 (193)
T 2oil_A 27 KVVLIGESGVGKTNLLSRFTRN 48 (193)
T ss_dssp EEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEECcCCCCHHHHHHHHhcC
Confidence 7899999999999999887654
No 321
>2a9k_A RAS-related protein RAL-A; bacterial ADP-ribosyltransferase, RAL, RHO, GD binding; HET: GDP NAD; 1.73A {Homo sapiens} SCOP: c.37.1.8 PDB: 2a78_A*
Probab=82.12 E-value=0.73 Score=38.95 Aligned_cols=22 Identities=14% Similarity=0.320 Sum_probs=19.5
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+...
T Consensus 20 ki~v~G~~~~GKSsli~~l~~~ 41 (187)
T 2a9k_A 20 KVIMVGSGGVGKSALTLQFMYD 41 (187)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhhC
Confidence 6999999999999999887653
No 322
>2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus} PDB: 2oaq_1
Probab=82.11 E-value=0.49 Score=48.87 Aligned_cols=29 Identities=7% Similarity=-0.079 Sum_probs=24.8
Q ss_pred eeeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 155 NSIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 155 ~pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+.+-+|+.++|.|+.|+|||||+..++..
T Consensus 255 ~~v~~g~~i~I~GptGSGKTTlL~aL~~~ 283 (511)
T 2oap_1 255 LAIEHKFSAIVVGETASGKTTTLNAIMMF 283 (511)
T ss_dssp HHHHTTCCEEEEESTTSSHHHHHHHHGGG
T ss_pred HHHhCCCEEEEECCCCCCHHHHHHHHHhh
Confidence 45568999999999999999999887644
No 323
>1m7b_A RND3/RHOE small GTP-binding protein; small GTPase, signaling protein; HET: GTP; 2.00A {Homo sapiens} SCOP: c.37.1.8 PDB: 2v55_B*
Probab=82.10 E-value=0.7 Score=39.61 Aligned_cols=22 Identities=9% Similarity=0.152 Sum_probs=19.6
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+..+
T Consensus 9 ki~v~G~~~vGKSsli~~l~~~ 30 (184)
T 1m7b_A 9 KIVVVGDSQCGKTALLHVFAKD 30 (184)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 6899999999999999888654
No 324
>3con_A GTPase NRAS; structural genomics consortium, SGC, GDP, oncogene, disease mutation, golgi apparatus, GTP-binding, lipoprotein membrane, methylation; HET: GDP; 1.65A {Homo sapiens} PDB: 2pmx_A* 3gft_A* 4q21_A*
Probab=81.99 E-value=0.73 Score=39.47 Aligned_cols=22 Identities=18% Similarity=0.409 Sum_probs=19.7
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+..+
T Consensus 23 ki~vvG~~~~GKSsli~~l~~~ 44 (190)
T 3con_A 23 KLVVVGAGGVGKSALTIQLIQN 44 (190)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECcCCCCHHHHHHHHHcC
Confidence 7899999999999999888754
No 325
>1m2o_B GTP-binding protein SAR1, GTP binding protein; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 2qtv_B*
Probab=81.99 E-value=0.72 Score=40.03 Aligned_cols=25 Identities=4% Similarity=0.089 Sum_probs=20.4
Q ss_pred cCceeeeecCCCCChhhhHHHHHHH
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+.-|+.++|.+|+|||+|+..+..+
T Consensus 22 ~~~ki~~vG~~~vGKSsli~~l~~~ 46 (190)
T 1m2o_B 22 KHGKLLFLGLDNAGKTTLLHMLKND 46 (190)
T ss_dssp --CEEEEEESTTSSHHHHHHHHHHS
T ss_pred CccEEEEECCCCCCHHHHHHHHhcC
Confidence 4458999999999999999888653
No 326
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A
Probab=81.98 E-value=0.81 Score=40.71 Aligned_cols=23 Identities=13% Similarity=0.161 Sum_probs=20.2
Q ss_pred CceeeeecCCCCChhhhHHHHHH
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
+-.++|.|++|+||||++..++.
T Consensus 4 ~~~I~i~G~~GSGKST~~~~L~~ 26 (218)
T 1vht_A 4 RYIVALTGGIGSGKSTVANAFAD 26 (218)
T ss_dssp CEEEEEECCTTSCHHHHHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHHH
Confidence 44689999999999999999875
No 327
>2efe_B Small GTP-binding protein-like; GEF, GTPase, VPS9, nucleotide, transport protein; HET: GNH; 2.08A {Arabidopsis thaliana} PDB: 2efd_B 2efc_B* 2efh_B*
Probab=81.98 E-value=0.72 Score=38.92 Aligned_cols=22 Identities=14% Similarity=0.360 Sum_probs=19.5
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+...
T Consensus 14 ki~v~G~~~~GKSsli~~l~~~ 35 (181)
T 2efe_B 14 KLVLLGDVGAGKSSLVLRFVKD 35 (181)
T ss_dssp EEEEECCTTSCHHHHHHHHHHC
T ss_pred EEEEECcCCCCHHHHHHHHHcC
Confidence 6899999999999999887654
No 328
>1mh1_A RAC1; GTP-binding, GTPase, small G-protein, RHO family, RAS super family; HET: GNP; 1.38A {Homo sapiens} SCOP: c.37.1.8 PDB: 1hh4_A* 2p2l_A* 2h7v_A* 1g4u_R* 1i4d_D* 1i4l_D* 2vrw_A 1e96_A* 1i4t_D* 2rmk_A* 2yin_C 1ryf_A* 1ryh_A* 3su8_A* 3sua_A* 2fju_A* 1he1_C* 2nz8_A 1foe_B 3bji_C ...
Probab=81.85 E-value=0.75 Score=38.90 Aligned_cols=22 Identities=5% Similarity=0.031 Sum_probs=19.5
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+..+
T Consensus 7 ~i~~~G~~~~GKssl~~~l~~~ 28 (186)
T 1mh1_A 7 KCVVVGDGAVGKTCLLISYTTN 28 (186)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 7899999999999999887643
No 329
>3kkq_A RAS-related protein M-RAS; GTP-binding, GTPase, signaling protein; HET: GDP; 1.20A {Mus musculus} SCOP: c.37.1.8 PDB: 3kkp_A* 3kko_A* 3pit_A* 3pir_A* 1x1r_A* 1x1s_A*
Probab=81.83 E-value=0.75 Score=39.04 Aligned_cols=23 Identities=13% Similarity=0.317 Sum_probs=19.8
Q ss_pred ceeeeecCCCCChhhhHHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
=|+.++|.+|+|||+|+..+..+
T Consensus 19 ~ki~v~G~~~~GKSsl~~~l~~~ 41 (183)
T 3kkq_A 19 YKLVVVGDGGVGKSALTIQFFQK 41 (183)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHHhC
Confidence 36899999999999999888754
No 330
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=81.83 E-value=0.77 Score=42.16 Aligned_cols=24 Identities=17% Similarity=0.225 Sum_probs=20.8
Q ss_pred eeeeecCCCCChhhhHHHHHHHhc
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
.++|.|++|+||||+...|+..-+
T Consensus 24 iI~I~G~~GSGKST~a~~L~~~lg 47 (252)
T 1uj2_A 24 LIGVSGGTASGKSSVCAKIVQLLG 47 (252)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHhh
Confidence 589999999999999999987533
No 331
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A*
Probab=81.79 E-value=0.84 Score=39.84 Aligned_cols=23 Identities=4% Similarity=0.114 Sum_probs=20.2
Q ss_pred eeeeecCCCCChhhhHHHHHHHh
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.++|.|++|+||||+...++..-
T Consensus 4 ~i~i~G~~GsGKst~~~~la~~l 26 (208)
T 3ake_A 4 IVTIDGPSASGKSSVARRVAAAL 26 (208)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHhc
Confidence 68999999999999999987643
No 332
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A*
Probab=81.76 E-value=0.59 Score=42.94 Aligned_cols=23 Identities=17% Similarity=0.260 Sum_probs=20.7
Q ss_pred eeeecCCCCChhhhHHHHHHHhc
Q 015796 163 IPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 163 ~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
++|.|++|+|||+|+..+++..+
T Consensus 47 vll~G~~GtGKT~la~~la~~~~ 69 (268)
T 2r62_A 47 VLLVGPPGTGKTLLAKAVAGEAH 69 (268)
T ss_dssp CCCBCSSCSSHHHHHHHHHHHHT
T ss_pred EEEECCCCCcHHHHHHHHHHHhC
Confidence 89999999999999999987654
No 333
>2bme_A RAB4A, RAS-related protein RAB4A; GTP-binding protein, vesicular transport, endocytosis, prenylation, protein transport, transport; HET: GNP; 1.57A {Homo sapiens} SCOP: c.37.1.8 PDB: 2bmd_A* 1yu9_A* 1z0k_A*
Probab=81.72 E-value=0.74 Score=39.13 Aligned_cols=22 Identities=18% Similarity=0.225 Sum_probs=19.5
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+...
T Consensus 12 ki~v~G~~~~GKSsli~~l~~~ 33 (186)
T 2bme_A 12 KFLVIGNAGTGKSCLLHQFIEK 33 (186)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 7899999999999999888653
No 334
>3bwd_D RAC-like GTP-binding protein ARAC6; G domain, cytoplasm, lipoprotein, membrane, methylation, nucleotide-binding, prenylation, ----; HET: GDP; 1.53A {Arabidopsis thaliana} PDB: 2nty_C* 2wbl_C
Probab=81.60 E-value=0.78 Score=38.74 Aligned_cols=23 Identities=4% Similarity=-0.042 Sum_probs=19.9
Q ss_pred ceeeeecCCCCChhhhHHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
-|+.++|.+|+|||+|+..+...
T Consensus 9 ~ki~v~G~~~~GKssl~~~~~~~ 31 (182)
T 3bwd_D 9 IKCVTVGDGAVGKTCLLISYTSN 31 (182)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHhcC
Confidence 47999999999999999887643
No 335
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=81.59 E-value=0.86 Score=43.14 Aligned_cols=28 Identities=11% Similarity=0.152 Sum_probs=22.9
Q ss_pred eeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 156 SIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 156 pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+-.+|.-+.|.|++|+||||++..++..
T Consensus 29 ~~~~~~livl~G~sGsGKSTla~~L~~~ 56 (287)
T 1gvn_B 29 AVESPTAFLLGGQPGSGKTSLRSAIFEE 56 (287)
T ss_dssp CCSSCEEEEEECCTTSCTHHHHHHHHHH
T ss_pred CCCCCeEEEEECCCCCCHHHHHHHHHHH
Confidence 3345667899999999999999998765
No 336
>2g6b_A RAS-related protein RAB-26; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, unknown function; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=81.56 E-value=0.78 Score=38.65 Aligned_cols=22 Identities=14% Similarity=0.217 Sum_probs=19.4
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+..+
T Consensus 12 ~i~v~G~~~~GKssli~~l~~~ 33 (180)
T 2g6b_A 12 KVMLVGDSGVGKTCLLVRFKDG 33 (180)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECcCCCCHHHHHHHHHhC
Confidence 7899999999999999887653
No 337
>2cxx_A Probable GTP-binding protein ENGB; structural genomics, NPPSFA, national P protein structural and functional analyses; HET: GDP; 1.70A {Pyrococcus horikoshii} SCOP: c.37.1.8
Probab=81.56 E-value=0.74 Score=39.17 Aligned_cols=21 Identities=5% Similarity=0.109 Sum_probs=18.8
Q ss_pred eeeeecCCCCChhhhHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~ 182 (400)
|+.++|.+|+|||+|+..+..
T Consensus 3 ki~v~G~~~~GKSsli~~l~~ 23 (190)
T 2cxx_A 3 TIIFAGRSNVGKSTLIYRLTG 23 (190)
T ss_dssp EEEEEEBTTSSHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 689999999999999988764
No 338
>3m6a_A ATP-dependent protease LA 1; alpha, beta, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; HET: ADP; 3.40A {Bacillus subtilis} PDB: 1x37_A
Probab=81.38 E-value=0.83 Score=47.33 Aligned_cols=27 Identities=22% Similarity=0.437 Sum_probs=24.3
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
+|.-+++.|++|+|||+|+..|++...
T Consensus 107 ~g~~vll~Gp~GtGKTtlar~ia~~l~ 133 (543)
T 3m6a_A 107 KGPILCLAGPPGVGKTSLAKSIAKSLG 133 (543)
T ss_dssp CSCEEEEESSSSSSHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHhcC
Confidence 789999999999999999999887653
No 339
>3c5c_A RAS-like protein 12; GDP, GTPase, structural genomics consortium, SGC, limited proteolysis, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.85A {Homo sapiens}
Probab=81.28 E-value=0.79 Score=39.58 Aligned_cols=22 Identities=5% Similarity=0.289 Sum_probs=19.6
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+..+
T Consensus 23 ki~vvG~~~vGKTsLi~~l~~~ 44 (187)
T 3c5c_A 23 NLAILGRRGAGKSALTVKFLTK 44 (187)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCcHHHHHHHHHhC
Confidence 7999999999999999887654
No 340
>2gf9_A RAS-related protein RAB-3D; G-protein, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.53A {Homo sapiens} PDB: 3rab_A*
Probab=81.27 E-value=0.8 Score=39.32 Aligned_cols=22 Identities=9% Similarity=0.172 Sum_probs=19.6
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+..+
T Consensus 24 ki~vvG~~~~GKSsli~~l~~~ 45 (189)
T 2gf9_A 24 KLLLIGNSSVGKTSFLFRYADD 45 (189)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 7899999999999999888654
No 341
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=81.13 E-value=0.81 Score=42.34 Aligned_cols=23 Identities=17% Similarity=0.356 Sum_probs=20.0
Q ss_pred eeeecCCCCChhhhHHHHHHHhc
Q 015796 163 IPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 163 ~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
+.|.|++|+|||||...|++.-+
T Consensus 4 i~I~G~~GSGKSTla~~La~~~~ 26 (253)
T 2ze6_A 4 HLIYGPTCSGKTDMAIQIAQETG 26 (253)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHHhcCC
Confidence 67899999999999999987643
No 342
>3tkl_A RAS-related protein RAB-1A; vesicle trafficking, protein transport-protein binding compl; HET: GTP; 2.18A {Homo sapiens}
Probab=81.10 E-value=0.82 Score=39.19 Aligned_cols=22 Identities=14% Similarity=0.292 Sum_probs=19.6
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+..+
T Consensus 18 ki~v~G~~~~GKSsli~~l~~~ 39 (196)
T 3tkl_A 18 KLLLIGDSGVGKSCLLLRFADD 39 (196)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECcCCCCHHHHHHHHHcC
Confidence 6899999999999999888753
No 343
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A*
Probab=81.05 E-value=0.87 Score=42.30 Aligned_cols=26 Identities=23% Similarity=0.431 Sum_probs=22.2
Q ss_pred CceeeeecCCCCChhhhHHHHHHHhc
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
+.-+++.|++|+|||+++..+++..+
T Consensus 50 ~~~vll~G~~GtGKT~la~~la~~l~ 75 (310)
T 1ofh_A 50 PKNILMIGPTGVGKTEIARRLAKLAN 75 (310)
T ss_dssp CCCEEEECCTTSSHHHHHHHHHHHHT
T ss_pred CceEEEECCCCCCHHHHHHHHHHHhC
Confidence 45689999999999999999887653
No 344
>3tw8_B RAS-related protein RAB-35; longin domain, RAB GTPase, guanine exchange factor; 2.10A {Homo sapiens}
Probab=81.05 E-value=0.79 Score=38.48 Aligned_cols=20 Identities=10% Similarity=0.345 Sum_probs=18.2
Q ss_pred eeeeecCCCCChhhhHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQIC 181 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~ 181 (400)
|+.++|.+|+|||+|+..+.
T Consensus 11 ~i~v~G~~~~GKssl~~~l~ 30 (181)
T 3tw8_B 11 KLLIIGDSGVGKSSLLLRFA 30 (181)
T ss_dssp EEEEECCTTSCHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHh
Confidence 68999999999999998774
No 345
>2iwr_A Centaurin gamma 1; ANK repeat, zinc-finger, GTP-binding, polymorphism, nucleotide-binding, alternative splicing, protein transport; HET: CAF; 1.5A {Homo sapiens} PDB: 2bmj_A
Probab=81.00 E-value=0.6 Score=39.50 Aligned_cols=23 Identities=4% Similarity=0.098 Sum_probs=20.0
Q ss_pred ceeeeecCCCCChhhhHHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
-|+.++|.+|+|||+|+..+..+
T Consensus 8 ~ki~~vG~~~vGKTsli~~l~~~ 30 (178)
T 2iwr_A 8 LRLGVLGDARSGKSSLIHRFLTG 30 (178)
T ss_dssp EEEEEECCGGGCHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHHhC
Confidence 37899999999999999888654
No 346
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A
Probab=80.92 E-value=0.8 Score=39.04 Aligned_cols=22 Identities=0% Similarity=0.226 Sum_probs=19.6
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+..+
T Consensus 25 ~i~v~G~~~~GKSsli~~l~~~ 46 (195)
T 3pqc_A 25 EVAFVGRSNVGKSSLLNALFNR 46 (195)
T ss_dssp EEEEEEBTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 7999999999999999887644
No 347
>2bov_A RAla, RAS-related protein RAL-A; C3BOT, exoenzyme, RAla, GTPase, ribosylating toxin, GTP-binding, lipoprotein, prenylation; HET: GDP; 2.66A {Homo sapiens}
Probab=80.90 E-value=0.84 Score=39.48 Aligned_cols=22 Identities=14% Similarity=0.320 Sum_probs=19.4
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+...
T Consensus 16 ki~v~G~~~~GKSsli~~l~~~ 37 (206)
T 2bov_A 16 KVIMVGSGGVGKSALTLQFMYD 37 (206)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 6899999999999999887643
No 348
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus}
Probab=80.85 E-value=0.76 Score=47.33 Aligned_cols=27 Identities=22% Similarity=0.469 Sum_probs=22.7
Q ss_pred eccCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 157 IARGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 157 igkGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
+-+| ++|.|++|+|||+|+..|+...+
T Consensus 63 ip~G--vLL~GppGtGKTtLaraIa~~~~ 89 (499)
T 2dhr_A 63 IPKG--VLLVGPPGVGKTHLARAVAGEAR 89 (499)
T ss_dssp CCSE--EEEECSSSSSHHHHHHHHHHHTT
T ss_pred CCce--EEEECCCCCCHHHHHHHHHHHhC
Confidence 3455 99999999999999999987654
No 349
>3gmt_A Adenylate kinase; ssgcid, ATP-BIN cytoplasm, nucleotide biosynthesis, nucleotide-BIND transferase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=80.84 E-value=0.91 Score=42.04 Aligned_cols=25 Identities=24% Similarity=0.278 Sum_probs=21.3
Q ss_pred ceeeeecCCCCChhhhHHHHHHHhc
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
-|.||+|++|+||||+...|+..-+
T Consensus 9 ~~~~~~G~pGsGKsT~a~~L~~~~g 33 (230)
T 3gmt_A 9 MRLILLGAPGAGKGTQANFIKEKFG 33 (230)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHT
T ss_pred cceeeECCCCCCHHHHHHHHHHHhC
Confidence 3789999999999999998876543
No 350
>2www_A Methylmalonic aciduria type A protein, mitochondrial; transport protein, nucleotide-binding; HET: GDP 2PE; 2.64A {Homo sapiens}
Probab=80.81 E-value=0.87 Score=44.41 Aligned_cols=24 Identities=8% Similarity=0.123 Sum_probs=21.5
Q ss_pred CceeeeecCCCCChhhhHHHHHHH
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+.+++|.|.+|+|||||+..++..
T Consensus 74 ~~~v~lvG~pgaGKSTLln~L~~~ 97 (349)
T 2www_A 74 AFRVGLSGPPGAGKSTFIEYFGKM 97 (349)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHH
T ss_pred ceEEEEEcCCCCCHHHHHHHHHHH
Confidence 778999999999999999988753
No 351
>1nrj_B SR-beta, signal recognition particle receptor beta subunit; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=80.77 E-value=0.84 Score=40.18 Aligned_cols=23 Identities=4% Similarity=0.059 Sum_probs=20.3
Q ss_pred ceeeeecCCCCChhhhHHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
-++.+.|++|+|||+|+..+...
T Consensus 13 ~~i~~~G~~g~GKTsl~~~l~~~ 35 (218)
T 1nrj_B 13 PSIIIAGPQNSGKTSLLTLLTTD 35 (218)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHhcC
Confidence 47899999999999999888764
No 352
>2cjw_A GTP-binding protein GEM; nucleotide-binding, small GTPase, conformational change, cysteine-modified, G-protein hydrolase; HET: GDP; 2.10A {Homo sapiens} PDB: 2cjw_B* 2ht6_A*
Probab=80.73 E-value=0.97 Score=39.39 Aligned_cols=22 Identities=14% Similarity=0.296 Sum_probs=19.5
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.+.|.+|+|||+|+..++..
T Consensus 8 kv~lvG~~~vGKSsL~~~~~~~ 29 (192)
T 2cjw_A 8 RVVLIGEQGVGKSTLANIFAGV 29 (192)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 7999999999999999887643
No 353
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=80.72 E-value=0.76 Score=52.79 Aligned_cols=33 Identities=18% Similarity=0.281 Sum_probs=28.2
Q ss_pred eeeeeeccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 152 DVMNSIARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 152 D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
|.=+.+-+|++++|.|++|+|||||++-|.+.-
T Consensus 436 ~isl~i~~G~~vaivG~sGsGKSTll~ll~~~~ 468 (1321)
T 4f4c_A 436 GMNLRVNAGQTVALVGSSGCGKSTIISLLLRYY 468 (1321)
T ss_dssp EEEEEECTTCEEEEEECSSSCHHHHHHHHTTSS
T ss_pred ceEEeecCCcEEEEEecCCCcHHHHHHHhcccc
Confidence 344788999999999999999999998886643
No 354
>2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A*
Probab=80.64 E-value=0.94 Score=40.81 Aligned_cols=23 Identities=13% Similarity=0.183 Sum_probs=19.9
Q ss_pred eeeeecCCCCChhhhHHHHHHHh
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
++.|.|++|+||||++..++..-
T Consensus 2 ~I~l~G~~GsGKsT~a~~La~~l 24 (223)
T 2xb4_A 2 NILIFGPNGSGKGTQGNLVKDKY 24 (223)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 57899999999999999987653
No 355
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=80.58 E-value=6.1 Score=39.72 Aligned_cols=26 Identities=15% Similarity=0.023 Sum_probs=22.8
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHh
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+|+.+.+.|+.|+||||++..++..-
T Consensus 97 ~~~vi~i~G~~GsGKTT~~~~LA~~l 122 (425)
T 2ffh_A 97 DRNLWFLVGLQGSGKTTTAAKLALYY 122 (425)
T ss_dssp SSEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 78889999999999999998887654
No 356
>1z06_A RAS-related protein RAB-33B; RAB GTPase, RAB33B GTPase, vesicular trafficking, protein transport; HET: GNP; 1.81A {Mus musculus} SCOP: c.37.1.8 PDB: 2g77_B*
Probab=80.51 E-value=0.88 Score=39.08 Aligned_cols=22 Identities=14% Similarity=0.318 Sum_probs=19.4
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+..+
T Consensus 22 ki~v~G~~~~GKSsli~~l~~~ 43 (189)
T 1z06_A 22 KIIVIGDSNVGKTCLTYRFCAG 43 (189)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 6899999999999999887653
No 357
>2lkc_A Translation initiation factor IF-2; NMR {Geobacillus stearothermophilus} PDB: 2lkd_A*
Probab=80.46 E-value=1 Score=37.85 Aligned_cols=24 Identities=8% Similarity=0.135 Sum_probs=20.8
Q ss_pred cCceeeeecCCCCChhhhHHHHHH
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
+.-|+.++|.+|+|||+|+..+..
T Consensus 7 ~~~~i~v~G~~~~GKssl~~~l~~ 30 (178)
T 2lkc_A 7 RPPVVTIMGHVDHGKTTLLDAIRH 30 (178)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCHHHHHHHHhC
Confidence 456899999999999999988764
No 358
>1svi_A GTP-binding protein YSXC; ENGB, GTPase, GDP, hydrolase; HET: GDP; 1.95A {Bacillus subtilis} SCOP: c.37.1.8 PDB: 1sul_A* 1svw_A*
Probab=80.39 E-value=0.86 Score=39.12 Aligned_cols=23 Identities=9% Similarity=0.117 Sum_probs=19.9
Q ss_pred CceeeeecCCCCChhhhHHHHHH
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
--|+.++|.+|+|||+|+..+..
T Consensus 23 ~~~i~v~G~~~~GKSsli~~l~~ 45 (195)
T 1svi_A 23 LPEIALAGRSNVGKSSFINSLIN 45 (195)
T ss_dssp CCEEEEEEBTTSSHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHhC
Confidence 35799999999999999988764
No 359
>2fg5_A RAB-22B, RAS-related protein RAB-31; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.80A {Homo sapiens} SCOP: c.37.1.8
Probab=80.38 E-value=0.85 Score=39.42 Aligned_cols=22 Identities=18% Similarity=0.424 Sum_probs=19.5
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|++++|.+|+|||+|+..+...
T Consensus 25 ki~vvG~~~~GKSsli~~l~~~ 46 (192)
T 2fg5_A 25 KVCLLGDTGVGKSSIVCRFVQD 46 (192)
T ss_dssp EEEEEECTTSSHHHHHHHHHHC
T ss_pred EEEEECcCCCCHHHHHHHHhcC
Confidence 6899999999999999888654
No 360
>1vg8_A RAS-related protein RAB-7; GTP-binding protein, protein transport; HET: GNP; 1.70A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 1vg0_B* 3law_A* 1t91_A* 1yhn_A* 1vg1_A* 1vg9_B*
Probab=80.36 E-value=0.88 Score=39.43 Aligned_cols=22 Identities=14% Similarity=0.356 Sum_probs=19.5
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+...
T Consensus 10 ki~v~G~~~~GKSsli~~l~~~ 31 (207)
T 1vg8_A 10 KVIILGDSGVGKTSLMNQYVNK 31 (207)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECcCCCCHHHHHHHHHcC
Confidence 6899999999999999888654
No 361
>3t5g_A GTP-binding protein RHEB; immunoglobulin-like beta sandwitch, PDE delta, RHEB; HET: GDP FAR; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 1xtq_A* 1xtr_A* 1xts_A* 2l0x_A* 3sea_A*
Probab=80.33 E-value=0.88 Score=38.52 Aligned_cols=22 Identities=14% Similarity=0.273 Sum_probs=19.4
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+...
T Consensus 8 ki~~~G~~~~GKSsli~~l~~~ 29 (181)
T 3t5g_A 8 KIAILGYRSVGKSSLTIQFVEG 29 (181)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECcCCCCHHHHHHHHHcC
Confidence 7899999999999999887643
No 362
>1zd9_A ADP-ribosylation factor-like 10B; transport protein, GDP-binding, membrane trafficking, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2al7_A* 2h18_A*
Probab=80.30 E-value=0.9 Score=39.10 Aligned_cols=22 Identities=9% Similarity=0.049 Sum_probs=19.4
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+..+
T Consensus 24 ki~v~G~~~~GKSsli~~l~~~ 45 (188)
T 1zd9_A 24 ELTLVGLQYSGKTTFVNVIASG 45 (188)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 6899999999999999888653
No 363
>3reg_A RHO-like small GTPase; cytoskeleton, nucleotide-binding, GTP-binding, signaling Pro lipoprotein, prenylation; HET: GSP; 1.80A {Entamoeba histolytica} PDB: 3ref_B* 4dvg_A*
Probab=80.29 E-value=0.9 Score=39.17 Aligned_cols=22 Identities=9% Similarity=0.149 Sum_probs=19.7
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+...
T Consensus 25 ki~~vG~~~~GKSsl~~~l~~~ 46 (194)
T 3reg_A 25 KIVVVGDGAVGKTCLLLAFSKG 46 (194)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECcCCCCHHHHHHHHhcC
Confidence 7999999999999999888654
No 364
>3t1o_A Gliding protein MGLA; G domain containing protein, bacterial GTPase, bacterial POL motility, POLE localisation, alpha/beta protein; HET: GDP; 1.90A {Thermus thermophilus} PDB: 3t12_A* 3t1q_A* 3t1t_A* 3t1v_A*
Probab=80.19 E-value=0.97 Score=38.52 Aligned_cols=21 Identities=14% Similarity=0.015 Sum_probs=18.1
Q ss_pred eeeeecCCCCChhhhHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~ 182 (400)
|+.++|.+|+|||+|+..+..
T Consensus 16 ki~vvG~~~~GKssL~~~l~~ 36 (198)
T 3t1o_A 16 KIVYYGPGLSGKTTNLKWIYS 36 (198)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 689999999999999966543
No 365
>2p67_A LAO/AO transport system kinase; ARGK, structural GEN PSI-2, protein structure initiative, NEW YORK SGX research for structural genomics; 1.80A {Escherichia coli} SCOP: c.37.1.10
Probab=80.14 E-value=0.74 Score=44.64 Aligned_cols=29 Identities=3% Similarity=-0.003 Sum_probs=25.0
Q ss_pred eeeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 155 NSIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 155 ~pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
....+|.+++|.|.+|+|||||+..++..
T Consensus 51 ~~~~~~~~i~i~G~~g~GKSTl~~~l~~~ 79 (341)
T 2p67_A 51 PYCGNTLRLGVTGTPGAGKSTFLEAFGML 79 (341)
T ss_dssp GGCSCSEEEEEEECTTSCHHHHHHHHHHH
T ss_pred cccCCCEEEEEEcCCCCCHHHHHHHHHHH
Confidence 35688999999999999999999887643
No 366
>2atv_A RERG, RAS-like estrogen-regulated growth inhibitor; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=80.10 E-value=0.91 Score=39.28 Aligned_cols=24 Identities=17% Similarity=0.412 Sum_probs=20.7
Q ss_pred CceeeeecCCCCChhhhHHHHHHH
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
--|+.++|.+|+|||+|+..+...
T Consensus 28 ~~ki~v~G~~~vGKSsli~~l~~~ 51 (196)
T 2atv_A 28 EVKLAIFGRAGVGKSALVVRFLTK 51 (196)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHS
T ss_pred ceEEEEECCCCCCHHHHHHHHHhC
Confidence 358999999999999999888654
No 367
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=80.08 E-value=1 Score=41.63 Aligned_cols=25 Identities=12% Similarity=0.129 Sum_probs=21.6
Q ss_pred cCceeeeecCCCCChhhhHHHHHHH
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
++..+.|.|.+|+||||++..++..
T Consensus 3 ~~~lIvl~G~pGSGKSTla~~La~~ 27 (260)
T 3a4m_A 3 DIMLIILTGLPGVGKSTFSKNLAKI 27 (260)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHH
T ss_pred CCEEEEEEcCCCCCHHHHHHHHHHH
Confidence 4567899999999999999998865
No 368
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=80.03 E-value=0.64 Score=48.50 Aligned_cols=29 Identities=10% Similarity=0.164 Sum_probs=25.4
Q ss_pred eeccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 156 SIARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 156 pigkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+-+|+.+.|.|.+|+|||||+..|+..-
T Consensus 365 ~~~~G~iI~LiG~sGSGKSTLar~La~~L 393 (552)
T 3cr8_A 365 RERQGFTVFFTGLSGAGKSTLARALAARL 393 (552)
T ss_dssp GGGSCEEEEEEESSCHHHHHHHHHHHHHH
T ss_pred ccccceEEEEECCCCChHHHHHHHHHHhh
Confidence 46689999999999999999999987654
No 369
>2a5j_A RAS-related protein RAB-2B; GTPase, signal transduction, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.50A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z0a_A*
Probab=80.03 E-value=0.93 Score=39.04 Aligned_cols=22 Identities=14% Similarity=0.221 Sum_probs=19.5
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+...
T Consensus 23 ki~v~G~~~~GKSsli~~l~~~ 44 (191)
T 2a5j_A 23 KYIIIGDTGVGKSCLLLQFTDK 44 (191)
T ss_dssp EEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEECcCCCCHHHHHHHHhcC
Confidence 7999999999999999887643
No 370
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A*
Probab=79.82 E-value=0.77 Score=43.77 Aligned_cols=20 Identities=10% Similarity=0.305 Sum_probs=17.6
Q ss_pred eeeeecCCCCChhhhHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQIC 181 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~ 181 (400)
+++|.|++|+|||||+..|.
T Consensus 20 ~I~lvG~nG~GKSTLl~~L~ 39 (301)
T 2qnr_A 20 TLMVVGESGLGKSTLINSLF 39 (301)
T ss_dssp EEEEEEETTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHh
Confidence 34999999999999998875
No 371
>1x3s_A RAS-related protein RAB-18; GTPase, GNP, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GNP; 1.32A {Homo sapiens} SCOP: c.37.1.8
Probab=79.52 E-value=1 Score=38.52 Aligned_cols=22 Identities=14% Similarity=0.330 Sum_probs=19.6
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+...
T Consensus 17 ~i~v~G~~~~GKssli~~l~~~ 38 (195)
T 1x3s_A 17 KILIIGESGVGKSSLLLRFTDD 38 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 7899999999999999888654
No 372
>2p5s_A RAS and EF-hand domain containing; G-protein, RAB, GDP, structural genomics, SGC, structural genomics consortium, signaling protein; HET: GDP; 2.15A {Homo sapiens}
Probab=79.49 E-value=0.98 Score=39.25 Aligned_cols=23 Identities=22% Similarity=0.416 Sum_probs=19.7
Q ss_pred ceeeeecCCCCChhhhHHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
=|+.++|.+|+|||+|+..+..+
T Consensus 29 ~ki~v~G~~~~GKSsli~~l~~~ 51 (199)
T 2p5s_A 29 YKIVLAGDAAVGKSSFLMRLCKN 51 (199)
T ss_dssp EEEEEESSTTSSHHHHHHHHHHC
T ss_pred eEEEEECcCCCCHHHHHHHHHhC
Confidence 37899999999999999887643
No 373
>1ega_A Protein (GTP-binding protein ERA); GTPase, RNA-binding, RAS-like, hydrolase; 2.40A {Escherichia coli} SCOP: c.37.1.8 d.52.3.1 PDB: 1x1l_X 3ieu_A* 1x18_X
Probab=79.48 E-value=0.83 Score=43.48 Aligned_cols=26 Identities=8% Similarity=0.106 Sum_probs=22.2
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHH
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
-++.+++|+|.+|+|||||+..+..+
T Consensus 6 ~r~~~VaIvG~~nvGKSTLln~L~g~ 31 (301)
T 1ega_A 6 SYCGFIAIVGRPNVGKSTLLNKLLGQ 31 (301)
T ss_dssp CEEEEEEEECSSSSSHHHHHHHHHTC
T ss_pred ccCCEEEEECCCCCCHHHHHHHHHCC
Confidence 35568999999999999999988754
No 374
>1fzq_A ADP-ribosylation factor-like protein 3; protein-GDP complex without magnesium, ARF family, RAS superfamily, G-domain, signaling protein; HET: MES GDP; 1.70A {Mus musculus} SCOP: c.37.1.8 PDB: 3bh7_A* 3bh6_A*
Probab=79.46 E-value=0.93 Score=38.89 Aligned_cols=22 Identities=14% Similarity=0.196 Sum_probs=19.1
Q ss_pred CceeeeecCCCCChhhhHHHHH
Q 015796 160 GQKIPLFSAAGLPHNEIAAQIC 181 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~ 181 (400)
.-|+.++|.+|+|||+|+..+.
T Consensus 16 ~~ki~ivG~~~vGKSsL~~~l~ 37 (181)
T 1fzq_A 16 EVRILLLGLDNAGKTTLLKQLA 37 (181)
T ss_dssp CEEEEEEESTTSSHHHHHHHHC
T ss_pred ceEEEEECCCCCCHHHHHHHHh
Confidence 3479999999999999998774
No 375
>3lxx_A GTPase IMAP family member 4; structural genomics consortium, SGC, coiled coil, GTP- binding, nucleotide-binding, immune system; HET: GDP; 2.15A {Homo sapiens}
Probab=79.44 E-value=0.98 Score=40.84 Aligned_cols=22 Identities=18% Similarity=0.270 Sum_probs=19.5
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|++++|.+|+|||+|+..|...
T Consensus 31 ~i~lvG~~g~GKStlin~l~g~ 52 (239)
T 3lxx_A 31 RIVLVGKTGAGKSATGNSILGR 52 (239)
T ss_dssp EEEEECCTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHcCC
Confidence 7899999999999999888643
No 376
>3oes_A GTPase rhebl1; small GTPase, structural genomics, structural genomics conso SGC, hydrolase; HET: GNP; 2.30A {Homo sapiens}
Probab=79.43 E-value=0.96 Score=39.38 Aligned_cols=24 Identities=13% Similarity=0.160 Sum_probs=20.7
Q ss_pred CceeeeecCCCCChhhhHHHHHHH
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
-=|+.++|.+|+|||+|+..+..+
T Consensus 24 ~~ki~vvG~~~~GKSsli~~l~~~ 47 (201)
T 3oes_A 24 YRKVVILGYRCVGKTSLAHQFVEG 47 (201)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHHS
T ss_pred cEEEEEECCCCcCHHHHHHHHHhC
Confidence 348999999999999999888754
No 377
>2fh5_B SR-beta, signal recognition particle receptor beta subunit; endomembrane targeting, GTPase, GAP, longin domain, SEDL, transport protein; HET: GTP; 2.45A {Mus musculus} SCOP: c.37.1.8 PDB: 2go5_2
Probab=79.40 E-value=0.99 Score=39.57 Aligned_cols=23 Identities=0% Similarity=0.011 Sum_probs=20.0
Q ss_pred ceeeeecCCCCChhhhHHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
-|+.++|.+|+|||+|+..+..+
T Consensus 8 ~ki~vvG~~~~GKTsli~~l~~~ 30 (214)
T 2fh5_B 8 RAVLFVGLCDSGKTLLFVRLLTG 30 (214)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHhCC
Confidence 47899999999999999888654
No 378
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=79.32 E-value=0.86 Score=43.49 Aligned_cols=26 Identities=8% Similarity=0.120 Sum_probs=21.9
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHH
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+++..++|.|++|+||||++..+++.
T Consensus 34 ~~~~~~ll~Gp~G~GKTtl~~~la~~ 59 (354)
T 1sxj_E 34 RDLPHLLLYGPNGTGKKTRCMALLES 59 (354)
T ss_dssp TCCCCEEEECSTTSSHHHHHHTHHHH
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHH
Confidence 45555999999999999999888874
No 379
>2ew1_A RAS-related protein RAB-30; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=79.25 E-value=0.97 Score=39.88 Aligned_cols=22 Identities=23% Similarity=0.344 Sum_probs=19.6
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+..+
T Consensus 28 ki~lvG~~~vGKSsLi~~l~~~ 49 (201)
T 2ew1_A 28 KIVLIGNAGVGKTCLVRRFTQG 49 (201)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECcCCCCHHHHHHHHHhC
Confidence 7899999999999999887654
No 380
>2qen_A Walker-type ATPase; unknown function; HET: ADP; 2.25A {Pyrococcus abyssi}
Probab=79.13 E-value=1.2 Score=41.99 Aligned_cols=24 Identities=4% Similarity=-0.011 Sum_probs=21.0
Q ss_pred CceeeeecCCCCChhhhHHHHHHH
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+-+.|.|++|+|||+|+.++++.
T Consensus 31 ~~~v~i~G~~G~GKT~Ll~~~~~~ 54 (350)
T 2qen_A 31 YPLTLLLGIRRVGKSSLLRAFLNE 54 (350)
T ss_dssp CSEEEEECCTTSSHHHHHHHHHHH
T ss_pred CCeEEEECCCcCCHHHHHHHHHHH
Confidence 577899999999999999988654
No 381
>2h17_A ADP-ribosylation factor-like protein 5A; GDP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GDP; 1.70A {Homo sapiens} PDB: 2h16_A* 1z6y_A* 1yzg_A*
Probab=79.10 E-value=0.78 Score=39.20 Aligned_cols=22 Identities=14% Similarity=0.123 Sum_probs=19.4
Q ss_pred ceeeeecCCCCChhhhHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~ 182 (400)
-|+.++|.+|+|||+|+..+..
T Consensus 22 ~~i~v~G~~~~GKSsli~~l~~ 43 (181)
T 2h17_A 22 HKVIIVGLDNAGKTTILYQFSM 43 (181)
T ss_dssp EEEEEEEETTSSHHHHHHHHHT
T ss_pred eEEEEECCCCCCHHHHHHHHhc
Confidence 3789999999999999988764
No 382
>2qmh_A HPR kinase/phosphorylase; V267F mutation, ATP-binding, carbohydrate metabolism, magnesium, metal-binding, multifunctional enzyme; 2.60A {Lactobacillus casei} PDB: 1jb1_A 1kkl_A 1kkm_A*
Probab=79.05 E-value=1.3 Score=40.38 Aligned_cols=29 Identities=14% Similarity=0.223 Sum_probs=24.4
Q ss_pred eccCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 157 IARGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 157 igkGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
-..|..+.|.|++|+|||+|+.++++...
T Consensus 31 ~~~g~~ilI~GpsGsGKStLA~~La~~g~ 59 (205)
T 2qmh_A 31 DIYGLGVLITGDSGVGKSETALELVQRGH 59 (205)
T ss_dssp EETTEEEEEECCCTTTTHHHHHHHHTTTC
T ss_pred EECCEEEEEECCCCCCHHHHHHHHHHhCC
Confidence 35678899999999999999999886543
No 383
>1a5t_A Delta prime, HOLB; zinc finger, DNA replication; 2.20A {Escherichia coli K12} SCOP: a.80.1.1 c.37.1.20 PDB: 1jr3_E* 1xxh_E* 1xxi_E* 3glf_E* 3glg_E* 3glh_E* 3gli_E*
Probab=78.90 E-value=5.2 Score=38.23 Aligned_cols=23 Identities=9% Similarity=0.222 Sum_probs=19.9
Q ss_pred eeeeecCCCCChhhhHHHHHHHh
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
-+++.|++|+|||+++..+++..
T Consensus 26 a~L~~G~~G~GKt~~a~~la~~l 48 (334)
T 1a5t_A 26 ALLIQALPGMGDDALIYALSRYL 48 (334)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHH
T ss_pred eEEEECCCCchHHHHHHHHHHHH
Confidence 37889999999999999888764
No 384
>3thx_A DNA mismatch repair protein MSH2; ABC family ATPase, mismatch recognition, mismatched unpaired DNA binding protein-DNA complex; HET: DNA ADP; 2.70A {Homo sapiens} PDB: 2o8c_A* 2o8d_A* 2o8f_A* 3thw_A* 2o8b_A* 3thy_A* 3thz_A* 2o8e_A*
Probab=78.88 E-value=1.2 Score=49.38 Aligned_cols=30 Identities=10% Similarity=-0.151 Sum_probs=27.1
Q ss_pred eeeeeeccCceeeeecCCCCChhhhHHHHH
Q 015796 152 DVMNSIARGQKIPLFSAAGLPHNEIAAQIC 181 (400)
Q Consensus 152 D~l~pigkGqr~~I~g~~G~GKt~L~~~i~ 181 (400)
|.-+.+.+|+.++|.|+.|+||||++.+++
T Consensus 654 disl~~~~g~i~~ItGpNGsGKSTlLr~ia 683 (934)
T 3thx_A 654 DVYFEKDKQMFHIITGPNMGGKSTYIRQTG 683 (934)
T ss_dssp EEEEETTTBCEEEEECCTTSSHHHHHHHHH
T ss_pred cceeecCCCeEEEEECCCCCCHHHHHHHHH
Confidence 677788899999999999999999998874
No 385
>1gwn_A RHO-related GTP-binding protein RHOE; GTPase, inactive GTPase, signal transduction; HET: GTP; 2.1A {Mus musculus} SCOP: c.37.1.8
Probab=78.78 E-value=1 Score=39.80 Aligned_cols=23 Identities=9% Similarity=0.111 Sum_probs=20.1
Q ss_pred ceeeeecCCCCChhhhHHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
-|+.++|.+|+|||+|+..+..+
T Consensus 29 ~ki~vvG~~~vGKSsLi~~l~~~ 51 (205)
T 1gwn_A 29 CKIVVVGDSQCGKTALLHVFAKD 51 (205)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHhcC
Confidence 37999999999999999888754
No 386
>1zbd_A Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: c.37.1.8
Probab=78.77 E-value=1.1 Score=38.84 Aligned_cols=22 Identities=9% Similarity=0.172 Sum_probs=19.3
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+...
T Consensus 10 ki~v~G~~~~GKSsli~~l~~~ 31 (203)
T 1zbd_A 10 KILIIGNSSVGKTSFLFRYADD 31 (203)
T ss_dssp EEEEECSTTSSHHHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 7899999999999999887643
No 387
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6
Probab=78.74 E-value=1 Score=42.83 Aligned_cols=24 Identities=8% Similarity=0.092 Sum_probs=17.6
Q ss_pred CceeeeecCCCCChhhhHHHHHHH
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
.-.++|.|++|+||||++..++..
T Consensus 5 ~~iIgItG~sGSGKSTva~~L~~~ 28 (290)
T 1a7j_A 5 HPIISVTGSSGAGTSTVKHTFDQI 28 (290)
T ss_dssp SCEEEEESCC---CCTHHHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHHHH
Confidence 346899999999999999988764
No 388
>2hf9_A Probable hydrogenase nickel incorporation protein HYPB; alpha and beta protein; HET: GSP; 1.90A {Methanocaldococcus jannaschii} PDB: 2hf8_A*
Probab=78.69 E-value=1.2 Score=39.52 Aligned_cols=24 Identities=8% Similarity=0.135 Sum_probs=20.8
Q ss_pred ceeeeecCCCCChhhhHHHHHHHh
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.++.|.|.+|+|||+|+..++.+.
T Consensus 39 ~~i~ivG~~gvGKTtl~~~l~~~~ 62 (226)
T 2hf9_A 39 VAFDFMGAIGSGKTLLIEKLIDNL 62 (226)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHH
T ss_pred eEEEEEcCCCCCHHHHHHHHHHHh
Confidence 478999999999999998887653
No 389
>2atx_A Small GTP binding protein TC10; GTPase, P-loop, alpha-beta, hydrolase; HET: GNP; 2.65A {Homo sapiens} SCOP: c.37.1.8
Probab=78.58 E-value=1.1 Score=38.64 Aligned_cols=22 Identities=5% Similarity=0.058 Sum_probs=19.8
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+..+
T Consensus 20 ki~v~G~~~~GKssli~~l~~~ 41 (194)
T 2atx_A 20 KCVVVGDGAVGKTCLLMSYAND 41 (194)
T ss_dssp EEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 7899999999999999888754
No 390
>4fcw_A Chaperone protein CLPB; AAA domain; HET: ADP; 2.35A {Thermus thermophilus} PDB: 4fcv_A* 4fd2_A* 4fct_A*
Probab=78.44 E-value=1.1 Score=41.87 Aligned_cols=24 Identities=13% Similarity=0.292 Sum_probs=21.1
Q ss_pred ceeeeecCCCCChhhhHHHHHHHh
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.-+++.|++|+|||+++..+++..
T Consensus 48 ~~~ll~G~~GtGKt~la~~la~~~ 71 (311)
T 4fcw_A 48 GSFLFLGPTGVGKTELAKTLAATL 71 (311)
T ss_dssp EEEEEESCSSSSHHHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHHHH
Confidence 468999999999999999988764
No 391
>2gf0_A GTP-binding protein DI-RAS1; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, transport protein; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=78.37 E-value=1.2 Score=38.27 Aligned_cols=23 Identities=13% Similarity=0.418 Sum_probs=20.2
Q ss_pred ceeeeecCCCCChhhhHHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
-|+.++|.+|+|||+|+..+...
T Consensus 9 ~ki~vvG~~~~GKSsli~~l~~~ 31 (199)
T 2gf0_A 9 YRVVVFGAGGVGKSSLVLRFVKG 31 (199)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCCcHHHHHHHHHcC
Confidence 47999999999999999888653
No 392
>1f6b_A SAR1; gtpases, N-terminal helix, Mg-containing complex, protein transport; HET: GDP; 1.70A {Cricetulus griseus} SCOP: c.37.1.8 PDB: 2fmx_A* 2fa9_A* 2gao_A*
Probab=78.32 E-value=0.91 Score=39.71 Aligned_cols=22 Identities=5% Similarity=0.054 Sum_probs=19.2
Q ss_pred CceeeeecCCCCChhhhHHHHH
Q 015796 160 GQKIPLFSAAGLPHNEIAAQIC 181 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~ 181 (400)
--|+.++|.+|+|||+|+..+.
T Consensus 25 ~~ki~lvG~~~vGKSsLi~~l~ 46 (198)
T 1f6b_A 25 TGKLVFLGLDNAGKTTLLHMLK 46 (198)
T ss_dssp CEEEEEEEETTSSHHHHHHHHS
T ss_pred CcEEEEECCCCCCHHHHHHHHh
Confidence 3489999999999999998774
No 393
>1wb9_A DNA mismatch repair protein MUTS; DNA-binding, ATP-binding, DNA binding, DNA repair, mismatch recognition; HET: DNA ADP; 2.10A {Escherichia coli} SCOP: a.113.1.1 c.37.1.12 c.55.6.1 d.75.2.1 PDB: 1wbb_A* 1e3m_A* 1oh5_A* 1oh6_A* 1oh7_A* 1oh8_A* 1w7a_A* 2wtu_A* 1wbd_A* 1ng9_A* 3k0s_A*
Probab=78.31 E-value=1.3 Score=48.22 Aligned_cols=30 Identities=7% Similarity=-0.103 Sum_probs=25.2
Q ss_pred eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 152 DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 152 D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
|.-+. .+|+.++|.|+.|+|||||+.+|+.
T Consensus 600 disl~-~~g~i~~ItGpNGsGKSTlLr~iag 629 (800)
T 1wb9_A 600 PLNLS-PQRRMLIITGPNMGGKSTYMRQTAL 629 (800)
T ss_dssp EEEEC-SSSCEEEEECCTTSSHHHHHHHHHH
T ss_pred ccccc-CCCcEEEEECCCCCChHHHHHHHHH
Confidence 44444 7889999999999999999998764
No 394
>2bcg_Y Protein YP2, GTP-binding protein YPT1; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ukv_Y* 3cue_F* 1yzn_A* 3sfv_A* 2wwx_A 2fol_A* 3nkv_A* 3jza_A* 2rhd_A*
Probab=78.28 E-value=1.1 Score=39.05 Aligned_cols=22 Identities=14% Similarity=0.286 Sum_probs=19.5
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+...
T Consensus 10 ki~v~G~~~~GKSsli~~l~~~ 31 (206)
T 2bcg_Y 10 KLLLIGNSGVGKSCLLLRFSDD 31 (206)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 7899999999999999887653
No 395
>4aby_A DNA repair protein RECN; hydrolase, double strand break repair, ATPase, nucleotide binding domain; HET: DNA; 3.00A {Deinococcus radiodurans}
Probab=78.28 E-value=0.57 Score=46.12 Aligned_cols=35 Identities=14% Similarity=0.184 Sum_probs=28.6
Q ss_pred ceeee-eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 147 GISTI-DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 147 GiraI-D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
+++.+ |.=+.+.+| +.+|.|+.|+|||||+..|..
T Consensus 47 nf~~l~~v~l~~~~G-~~~lvG~NGaGKStLl~aI~~ 82 (415)
T 4aby_A 47 NLATITQLELELGGG-FCAFTGETGAGKSIIVDALGL 82 (415)
T ss_dssp EETTEEEEEEECCSS-EEEEEESHHHHHHHHTHHHHH
T ss_pred cccceeeEEEecCCC-cEEEECCCCCCHHHHHHHHHH
Confidence 45556 344788999 999999999999999988754
No 396
>4bas_A ADP-ribosylation factor, putative (small GTPase, putative); hydrolase; HET: GNP; 2.00A {Trypanosoma brucei TREU927}
Probab=78.16 E-value=1.1 Score=38.48 Aligned_cols=22 Identities=9% Similarity=0.075 Sum_probs=19.1
Q ss_pred ceeeeecCCCCChhhhHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~ 182 (400)
-|+.++|.+|+|||+|+..+..
T Consensus 18 ~ki~v~G~~~~GKSsl~~~l~~ 39 (199)
T 4bas_A 18 LQVVMCGLDNSGKTTIINQVKP 39 (199)
T ss_dssp EEEEEECCTTSCHHHHHHHHSC
T ss_pred cEEEEECCCCCCHHHHHHHHhc
Confidence 4789999999999999988753
No 397
>3umf_A Adenylate kinase; rossmann fold, transferase; 2.05A {Schistosoma mansoni}
Probab=78.16 E-value=1.2 Score=40.72 Aligned_cols=23 Identities=9% Similarity=0.164 Sum_probs=19.4
Q ss_pred eeeecCCCCChhhhHHHHHHHhc
Q 015796 163 IPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 163 ~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
+.|+|++|+||+|.+..|++.-+
T Consensus 32 I~llGpPGsGKgTqa~~L~~~~g 54 (217)
T 3umf_A 32 IFVLGGPGSGKGTQCEKLVQKFH 54 (217)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHHHC
Confidence 57899999999999998876543
No 398
>1moz_A ARL1, ADP-ribosylation factor-like protein 1; GTP-binding, protein binding; HET: GDP; 3.17A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=78.11 E-value=0.79 Score=38.82 Aligned_cols=23 Identities=13% Similarity=0.229 Sum_probs=19.6
Q ss_pred cCceeeeecCCCCChhhhHHHHH
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQIC 181 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~ 181 (400)
+.-|+.++|.+|+|||+|+..+.
T Consensus 17 ~~~~i~v~G~~~~GKssli~~l~ 39 (183)
T 1moz_A 17 KELRILILGLDGAGKTTILYRLQ 39 (183)
T ss_dssp SCEEEEEEEETTSSHHHHHHHTC
T ss_pred CccEEEEECCCCCCHHHHHHHHh
Confidence 44589999999999999997764
No 399
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20
Probab=78.07 E-value=4.1 Score=44.34 Aligned_cols=25 Identities=12% Similarity=0.244 Sum_probs=21.1
Q ss_pred CceeeeecCCCCChhhhHHHHHHHh
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
..-+++.|++|+|||+|+..+++..
T Consensus 191 ~~~vlL~G~pG~GKT~la~~la~~l 215 (854)
T 1qvr_A 191 KNNPVLIGEPGVGKTAIVEGLAQRI 215 (854)
T ss_dssp CCCCEEEECTTSCHHHHHHHHHHHH
T ss_pred CCceEEEcCCCCCHHHHHHHHHHHH
Confidence 3458999999999999998887664
No 400
>1zj6_A ADP-ribosylation factor-like protein 5; ARL, GTP-binding, transport protein; HET: G3D; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=77.96 E-value=1.2 Score=38.17 Aligned_cols=23 Identities=13% Similarity=0.107 Sum_probs=19.9
Q ss_pred CceeeeecCCCCChhhhHHHHHH
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
--|+.++|.+|+|||+|+..+..
T Consensus 16 ~~~i~v~G~~~~GKssl~~~l~~ 38 (187)
T 1zj6_A 16 EHKVIIVGLDNAGKTTILYQFSM 38 (187)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHT
T ss_pred ccEEEEECCCCCCHHHHHHHHhc
Confidence 45789999999999999988763
No 401
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=77.96 E-value=1.4 Score=38.79 Aligned_cols=23 Identities=4% Similarity=0.105 Sum_probs=19.4
Q ss_pred ceeeeecCCCCChhhhHHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
..+.|.|++|+|||||+..+.+.
T Consensus 7 ~~i~i~G~sGsGKTTl~~~l~~~ 29 (174)
T 1np6_A 7 PLLAFAAWSGTGKTTLLKKLIPA 29 (174)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHh
Confidence 35789999999999999887754
No 402
>2o52_A RAS-related protein RAB-4B; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.20A {Homo sapiens}
Probab=77.86 E-value=1.2 Score=38.93 Aligned_cols=21 Identities=19% Similarity=0.234 Sum_probs=18.8
Q ss_pred eeeeecCCCCChhhhHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~ 182 (400)
|+.++|.+|+|||+|+..+..
T Consensus 27 ki~v~G~~~~GKSsLi~~l~~ 47 (200)
T 2o52_A 27 KFLVIGSAGTGKSCLLHQFIE 47 (200)
T ss_dssp EEEEEESTTSSHHHHHHHHHC
T ss_pred EEEEECcCCCCHHHHHHHHHh
Confidence 789999999999999988753
No 403
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=77.84 E-value=0.56 Score=41.31 Aligned_cols=23 Identities=9% Similarity=0.143 Sum_probs=19.8
Q ss_pred eeeeecCCCCChhhhHHHHHHHh
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+.|.|++|+||||++..|++.-
T Consensus 2 ~I~i~G~~GsGKsTl~~~L~~~l 24 (214)
T 1gtv_A 2 LIAIEGVDGAGKRTLVEKLSGAF 24 (214)
T ss_dssp EEEEEEEEEEEHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHHHHHH
Confidence 36789999999999999987654
No 404
>1ksh_A ARF-like protein 2; small GTPase, small GTP-binding protein, ARF family; HET: CME GDP; 1.80A {Mus musculus} SCOP: c.37.1.8 PDB: 1ksg_A* 1ksj_A* 3doe_A* 3dof_A*
Probab=77.74 E-value=1.2 Score=37.99 Aligned_cols=24 Identities=8% Similarity=0.140 Sum_probs=20.4
Q ss_pred cCceeeeecCCCCChhhhHHHHHH
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
+.-|+.++|.+|+|||+|+..+..
T Consensus 17 ~~~~i~v~G~~~~GKssl~~~l~~ 40 (186)
T 1ksh_A 17 RELRLLMLGLDNAGKTTILKKFNG 40 (186)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHTT
T ss_pred CeeEEEEECCCCCCHHHHHHHHhc
Confidence 445799999999999999988753
No 405
>1udx_A The GTP-binding protein OBG; TGS domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.07A {Thermus thermophilus} SCOP: b.117.1.1 c.37.1.8 d.242.1.1
Probab=77.70 E-value=1 Score=45.22 Aligned_cols=32 Identities=9% Similarity=0.069 Sum_probs=27.2
Q ss_pred eeeeeeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 152 DVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 152 D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+.-+.+-.|..++|.|.+|+|||||+..|+..
T Consensus 149 ~i~lelk~g~~VgLVG~~gAGKSTLL~~Lsg~ 180 (416)
T 1udx_A 149 RLRLELMLIADVGLVGYPNAGKSSLLAAMTRA 180 (416)
T ss_dssp EEEEEECCSCSEEEECCGGGCHHHHHHHHCSS
T ss_pred eeeeEEcCCCEEEEECCCCCcHHHHHHHHHcC
Confidence 44567888999999999999999999988643
No 406
>2ocp_A DGK, deoxyguanosine kinase; protein-nucleotide complex, transferase; HET: DTP; 2.80A {Homo sapiens} SCOP: c.37.1.1
Probab=77.59 E-value=1.3 Score=40.06 Aligned_cols=26 Identities=0% Similarity=0.092 Sum_probs=22.3
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHh
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
||..+.|.|..|+||||++..+++.-
T Consensus 1 ~~~~i~~~G~~g~GKtt~~~~l~~~l 26 (241)
T 2ocp_A 1 GPRRLSIEGNIAVGKSTFVKLLTKTY 26 (241)
T ss_dssp CCEEEEEEECTTSSHHHHHHHHHHHC
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHHc
Confidence 46678999999999999999998763
No 407
>2fu5_C RAS-related protein RAB-8A; MSS4:RAB8 protein complex, GEF:GTPase nucleotide free complex; 2.00A {Mus musculus} SCOP: c.37.1.8 PDB: 3qbt_A* 3tnf_A*
Probab=77.57 E-value=0.82 Score=38.81 Aligned_cols=21 Identities=14% Similarity=0.278 Sum_probs=9.5
Q ss_pred eeeeecCCCCChhhhHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~ 182 (400)
|+.++|.+|+|||+|+..+..
T Consensus 10 ki~v~G~~~~GKssl~~~l~~ 30 (183)
T 2fu5_C 10 KLLLIGDSGVGKTCVLFRFSE 30 (183)
T ss_dssp EEEEECCCCC-----------
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 789999999999999877653
No 408
>2orw_A Thymidine kinase; TMTK, TP4A, transferase; HET: 4TA; 1.50A {Thermotoga maritima} PDB: 2qpo_A 2qq0_A* 2qqe_A*
Probab=77.53 E-value=1.5 Score=38.54 Aligned_cols=26 Identities=4% Similarity=-0.129 Sum_probs=20.8
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHh
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+|+-..|.|++|+||||++.+++++.
T Consensus 2 ~g~i~vi~G~~gsGKTT~ll~~~~~~ 27 (184)
T 2orw_A 2 SGKLTVITGPMYSGKTTELLSFVEIY 27 (184)
T ss_dssp CCCEEEEEESTTSSHHHHHHHHHHHH
T ss_pred ccEEEEEECCCCCCHHHHHHHHHHHH
Confidence 46778899999999999986666543
No 409
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=77.53 E-value=1.1 Score=45.74 Aligned_cols=23 Identities=22% Similarity=0.296 Sum_probs=20.9
Q ss_pred eeeecCCCCChhhhHHHHHHHhc
Q 015796 163 IPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 163 ~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
++|.|++|+|||+|+..++...+
T Consensus 52 vLL~GppGtGKT~Laraia~~~~ 74 (476)
T 2ce7_A 52 ILLVGPPGTGKTLLARAVAGEAN 74 (476)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHcC
Confidence 89999999999999999987664
No 410
>2fv8_A H6, RHO-related GTP-binding protein RHOB; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=77.51 E-value=1.3 Score=38.84 Aligned_cols=22 Identities=5% Similarity=0.096 Sum_probs=19.7
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+...
T Consensus 27 ki~vvG~~~~GKSsli~~l~~~ 48 (207)
T 2fv8_A 27 KLVVVGDGACGKTCLLIVFSKD 48 (207)
T ss_dssp EEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEECcCCCCHHHHHHHHhcC
Confidence 7999999999999999888653
No 411
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=77.39 E-value=1.1 Score=42.81 Aligned_cols=22 Identities=9% Similarity=0.320 Sum_probs=19.7
Q ss_pred eeeecCCCCChhhhHHHHHHHh
Q 015796 163 IPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 163 ~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+++.|++|+|||+++..+++..
T Consensus 49 ~ll~Gp~G~GKTtla~~la~~l 70 (340)
T 1sxj_C 49 LLFYGPPGTGKTSTIVALAREI 70 (340)
T ss_dssp EEEECSSSSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 7999999999999999888763
No 412
>3cbq_A GTP-binding protein REM 2; FLJ38964A, structural genomics consortium, SGC, GDP, membrane, nucleotide-binding, nucleotide binding protein; HET: GDP; 1.82A {Homo sapiens}
Probab=77.35 E-value=1 Score=39.40 Aligned_cols=20 Identities=20% Similarity=0.375 Sum_probs=18.0
Q ss_pred eeeeecCCCCChhhhHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQIC 181 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~ 181 (400)
|+.++|.+|+|||+|+..+.
T Consensus 25 ki~vvG~~~vGKSsLi~~l~ 44 (195)
T 3cbq_A 25 KVMLVGESGVGKSTLAGTFG 44 (195)
T ss_dssp EEEEECSTTSSHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHH
Confidence 78999999999999997764
No 413
>3k53_A Ferrous iron transport protein B; GTPase fold, helical bundle, G-protein, prokaryote, GTP-BIND nucleotide-binding, metal transport; 2.70A {Pyrococcus furiosus}
Probab=77.34 E-value=1.1 Score=41.43 Aligned_cols=21 Identities=10% Similarity=0.194 Sum_probs=19.0
Q ss_pred eeeeecCCCCChhhhHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~ 182 (400)
|++++|.+|+|||||+..+..
T Consensus 5 ~i~lvG~~g~GKTTL~n~l~g 25 (271)
T 3k53_A 5 TVALVGNPNVGKTTIFNALTG 25 (271)
T ss_dssp EEEEEECSSSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 789999999999999988864
No 414
>2ohf_A Protein OLA1, GTP-binding protein 9; ATPase, GTPase, P-loop, OBG-like, hydrolase; HET: ACP; 2.70A {Homo sapiens}
Probab=77.33 E-value=1.1 Score=44.72 Aligned_cols=28 Identities=7% Similarity=0.116 Sum_probs=23.5
Q ss_pred eeccCceeeeecCCCCChhhhHHHHHHH
Q 015796 156 SIARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 156 pigkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
-+.+|.+++|.|.+|+|||||+..+...
T Consensus 18 ~i~~~~kvgIVG~pnvGKSTL~n~Ltg~ 45 (396)
T 2ohf_A 18 RFGTSLKIGIVGLPNVGKSTFFNVLTNS 45 (396)
T ss_dssp CSSSCCCEEEECCSSSSHHHHHHHHHC-
T ss_pred hccCCCEEEEECCCCCCHHHHHHHHHCC
Confidence 3467889999999999999999888643
No 415
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=77.28 E-value=2.8 Score=42.07 Aligned_cols=24 Identities=25% Similarity=0.400 Sum_probs=21.5
Q ss_pred ceeeeecCCCCChhhhHHHHHHHh
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.-++|.|++|+|||+|+..+++..
T Consensus 168 ~~vLL~GppGtGKT~lA~aia~~~ 191 (444)
T 2zan_A 168 RGILLFGPPGTGKSYLAKAVATEA 191 (444)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHC
T ss_pred ceEEEECCCCCCHHHHHHHHHHHc
Confidence 458999999999999999998775
No 416
>4gzl_A RAS-related C3 botulinum toxin substrate 1; rossmann fold, GTP binding, membrane, hydrolase; HET: GNP; 2.00A {Homo sapiens} PDB: 3th5_A* 4gzm_A*
Probab=77.25 E-value=1.2 Score=39.02 Aligned_cols=25 Identities=4% Similarity=0.029 Sum_probs=20.6
Q ss_pred cCceeeeecCCCCChhhhHHHHHHH
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+-=|+.++|.+|+|||+|+..+..+
T Consensus 29 ~~~ki~vvG~~~~GKSsLi~~l~~~ 53 (204)
T 4gzl_A 29 QAIKCVVVGDGAVGKTCLLISYTTN 53 (204)
T ss_dssp -CEEEEEEESTTSSHHHHHHHHHHS
T ss_pred CeEEEEEECcCCCCHHHHHHHHHhC
Confidence 3457999999999999999887654
No 417
>3hws_A ATP-dependent CLP protease ATP-binding subunit CL; CLPXP, AAA+ molecular machine, hexamer, asymmetric,, ATP-BIN chaperone, metal-binding; HET: ADP; 3.25A {Escherichia coli} PDB: 3hte_A
Probab=77.13 E-value=1.3 Score=42.75 Aligned_cols=26 Identities=19% Similarity=0.253 Sum_probs=22.1
Q ss_pred CceeeeecCCCCChhhhHHHHHHHhc
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
+..+++.|++|+|||+++..|++..+
T Consensus 51 ~~~vll~GppGtGKT~la~~ia~~~~ 76 (363)
T 3hws_A 51 KSNILLIGPTGSGKTLLAETLARLLD 76 (363)
T ss_dssp CCCEEEECCTTSSHHHHHHHHHHHTT
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHcC
Confidence 44689999999999999999987653
No 418
>3q3j_B RHO-related GTP-binding protein RHO6; RAS-binding domain, plexin, small GTPase, structural genomic consortium, SGC; HET: GNP; 1.97A {Homo sapiens} PDB: 2rex_B* 2cls_A*
Probab=77.11 E-value=1.3 Score=39.36 Aligned_cols=23 Identities=9% Similarity=0.141 Sum_probs=20.1
Q ss_pred ceeeeecCCCCChhhhHHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
=|+.++|.+|+|||+|+..+..+
T Consensus 28 ~ki~vvG~~~vGKSsL~~~l~~~ 50 (214)
T 3q3j_B 28 CKLVLVGDVQCGKTAMLQVLAKD 50 (214)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEEECcCCCCHHHHHHHHhcC
Confidence 47899999999999999888654
No 419
>3cph_A RAS-related protein SEC4; RAB GTPase, prenylation, vesicular transport, cytoplasm, cytoplasmic vesicle, exocytosis, GTP-binding; HET: GDP; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=77.09 E-value=1.4 Score=38.33 Aligned_cols=22 Identities=18% Similarity=0.304 Sum_probs=19.5
Q ss_pred ceeeeecCCCCChhhhHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~ 182 (400)
=|+.++|.+|+|||+|+..+..
T Consensus 21 ~~i~v~G~~~~GKSsli~~l~~ 42 (213)
T 3cph_A 21 MKILLIGDSGVGKSCLLVRFVE 42 (213)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHh
Confidence 4789999999999999988764
No 420
>2f7s_A C25KG, RAS-related protein RAB-27B; G-protein, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2iez_A*
Probab=77.08 E-value=1.3 Score=38.89 Aligned_cols=21 Identities=10% Similarity=0.178 Sum_probs=18.8
Q ss_pred eeeeecCCCCChhhhHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~ 182 (400)
|+.++|.+|+|||+|+..+..
T Consensus 27 ki~vvG~~~~GKSsLi~~l~~ 47 (217)
T 2f7s_A 27 KLLALGDSGVGKTTFLYRYTD 47 (217)
T ss_dssp EEEEESCTTSSHHHHHHHHHC
T ss_pred EEEEECcCCCCHHHHHHHHhc
Confidence 789999999999999988763
No 421
>2ga8_A Hypothetical 39.9 kDa protein; YFR007W, YFH7, unknown function; HET: CME; 1.77A {Saccharomyces cerevisiae} PDB: 2gaa_A*
Probab=76.83 E-value=1.3 Score=43.69 Aligned_cols=29 Identities=21% Similarity=0.431 Sum_probs=23.7
Q ss_pred eccCce--eeeecCCCCChhhhHHHHHHHhc
Q 015796 157 IARGQK--IPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 157 igkGqr--~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
+-.|++ +.|.|++|+||||++..|++..+
T Consensus 19 i~~g~~~~i~l~G~~G~GKTTl~~~la~~l~ 49 (359)
T 2ga8_A 19 IEDNYRVCVILVGSPGSGKSTIAEELCQIIN 49 (359)
T ss_dssp TTTCSCEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred hccCCeeEEEEECCCCCcHHHHHHHHHHHhC
Confidence 346667 99999999999999988876544
No 422
>2il1_A RAB12; G-protein, GDP, GTPase, predicted, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.10A {Homo sapiens}
Probab=76.80 E-value=1.3 Score=38.33 Aligned_cols=20 Identities=5% Similarity=0.317 Sum_probs=18.2
Q ss_pred eeeeecCCCCChhhhHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQIC 181 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~ 181 (400)
|+.++|.+|+|||+|+..+.
T Consensus 28 ki~vvG~~~~GKSsLi~~l~ 47 (192)
T 2il1_A 28 QVIIIGSRGVGKTSLMERFT 47 (192)
T ss_dssp EEEEECSTTSSHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHh
Confidence 78999999999999998774
No 423
>2fna_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE ADP; 2.00A {Sulfolobus solfataricus} SCOP: a.4.5.11 c.37.1.20
Probab=76.75 E-value=1.3 Score=41.72 Aligned_cols=24 Identities=4% Similarity=-0.121 Sum_probs=21.0
Q ss_pred ceeeeecCCCCChhhhHHHHHHHh
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+-+.|.|++|+|||+|+.++++..
T Consensus 31 ~~v~i~G~~G~GKT~L~~~~~~~~ 54 (357)
T 2fna_A 31 PITLVLGLRRTGKSSIIKIGINEL 54 (357)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CcEEEECCCCCCHHHHHHHHHHhc
Confidence 478999999999999999987654
No 424
>3k1j_A LON protease, ATP-dependent protease LON; ATP-binding, nucleotide-binding, Pro hydrolase; HET: ADP PE8; 2.00A {Thermococcus onnurineus}
Probab=76.72 E-value=1.1 Score=46.89 Aligned_cols=30 Identities=7% Similarity=0.182 Sum_probs=25.7
Q ss_pred eeeccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 155 NSIARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 155 ~pigkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+.+-.|+.++|.|++|+|||||+..|++..
T Consensus 55 ~~i~~g~~vll~Gp~GtGKTtlar~ia~~l 84 (604)
T 3k1j_A 55 TAANQKRHVLLIGEPGTGKSMLGQAMAELL 84 (604)
T ss_dssp HHHHTTCCEEEECCTTSSHHHHHHHHHHTS
T ss_pred ccccCCCEEEEEeCCCCCHHHHHHHHhccC
Confidence 445678899999999999999999988754
No 425
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A*
Probab=76.69 E-value=1.3 Score=44.53 Aligned_cols=25 Identities=12% Similarity=0.226 Sum_probs=21.8
Q ss_pred CceeeeecCCCCChhhhHHHHHHHh
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+.-+.|.|++|+|||+|+..|++..
T Consensus 130 ~~~lll~Gp~G~GKTtLa~aia~~l 154 (440)
T 2z4s_A 130 YNPLFIYGGVGLGKTHLLQSIGNYV 154 (440)
T ss_dssp SCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHH
Confidence 5668999999999999999888764
No 426
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406}
Probab=76.65 E-value=0.94 Score=43.04 Aligned_cols=27 Identities=19% Similarity=0.263 Sum_probs=23.0
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
.|.-+++.|++|+|||+|+..+++..+
T Consensus 45 ~~~~vll~G~pGtGKT~la~~la~~~~ 71 (331)
T 2r44_A 45 TGGHILLEGVPGLAKTLSVNTLAKTMD 71 (331)
T ss_dssp HTCCEEEESCCCHHHHHHHHHHHHHTT
T ss_pred cCCeEEEECCCCCcHHHHHHHHHHHhC
Confidence 467899999999999999999887543
No 427
>2q3h_A RAS homolog gene family, member U; GTPase, structural genomics, structural genomics consortium,; HET: GDP; 1.73A {Homo sapiens}
Probab=76.64 E-value=1.4 Score=38.12 Aligned_cols=22 Identities=9% Similarity=0.113 Sum_probs=19.3
Q ss_pred ceeeeecCCCCChhhhHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~ 182 (400)
-|+.++|.+|+|||+|+..+..
T Consensus 21 ~ki~~~G~~~~GKssl~~~l~~ 42 (201)
T 2q3h_A 21 VKCVLVGDGAVGKTSLVVSYTT 42 (201)
T ss_dssp EEEEEECSTTSSHHHHHHHHHC
T ss_pred eEEEEECCCCCCHHHHHHHHHh
Confidence 4799999999999999988763
No 428
>2gco_A H9, RHO-related GTP-binding protein RHOC; GTPase,signaling protein, signaling Pro; HET: GNP; 1.40A {Homo sapiens} PDB: 2gcn_A* 2gcp_A* 1z2c_A* 1x86_B 2rgn_C* 1lb1_B 1s1c_A* 3kz1_E* 3lxr_A* 3lwn_A* 3lw8_A* 1cxz_A* 1a2b_A* 1ow3_B* 1ftn_A* 1cc0_A* 3msx_A* 1xcg_B 3t06_B 1tx4_B* ...
Probab=76.62 E-value=1.4 Score=38.35 Aligned_cols=22 Identities=5% Similarity=0.111 Sum_probs=19.6
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+...
T Consensus 27 ki~vvG~~~~GKSsli~~l~~~ 48 (201)
T 2gco_A 27 KLVIVGDGACGKTCLLIVFSKD 48 (201)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 7999999999999999887653
No 429
>2hup_A RAS-related protein RAB-43; G-protein, GDP, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.05A {Homo sapiens}
Probab=76.41 E-value=1.3 Score=38.69 Aligned_cols=21 Identities=14% Similarity=0.192 Sum_probs=18.9
Q ss_pred eeeeecCCCCChhhhHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~ 182 (400)
|+.++|.+|+|||+|+..+..
T Consensus 31 ki~vvG~~~vGKSsli~~l~~ 51 (201)
T 2hup_A 31 KLVLVGDASVGKTCVVQRFKT 51 (201)
T ss_dssp EEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHhh
Confidence 789999999999999988754
No 430
>2b6h_A ADP-ribosylation factor 5; membrane trafficking, GDP, structural genomics, structural G consortium, SGC, protein transport; HET: GDP; 1.76A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z6x_A* 3aq4_A*
Probab=76.32 E-value=1.3 Score=38.43 Aligned_cols=22 Identities=9% Similarity=0.078 Sum_probs=19.1
Q ss_pred CceeeeecCCCCChhhhHHHHH
Q 015796 160 GQKIPLFSAAGLPHNEIAAQIC 181 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~ 181 (400)
.-|+.++|.+|+|||+|+..+.
T Consensus 29 ~~ki~v~G~~~vGKSsLi~~l~ 50 (192)
T 2b6h_A 29 QMRILMVGLDAAGKTTILYKLK 50 (192)
T ss_dssp CEEEEEEESTTSSHHHHHHHHC
T ss_pred ccEEEEECCCCCCHHHHHHHHH
Confidence 3579999999999999998774
No 431
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=76.21 E-value=1.6 Score=38.34 Aligned_cols=22 Identities=0% Similarity=-0.105 Sum_probs=18.8
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
.++|.|.+|+|||||+..+++.
T Consensus 6 ~i~i~G~sGsGKTTl~~~L~~~ 27 (169)
T 1xjc_A 6 VWQVVGYKHSGKTTLMEKWVAA 27 (169)
T ss_dssp EEEEECCTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHh
Confidence 4788999999999999887754
No 432
>3thx_B DNA mismatch repair protein MSH3; ABC family ATPase, mismatch recognition, mismatched unpaired DNA binding protein-DNA complex; HET: DNA ADP; 2.70A {Homo sapiens} PDB: 3thw_B* 3thy_B* 3thz_B*
Probab=76.12 E-value=1.1 Score=49.59 Aligned_cols=31 Identities=6% Similarity=-0.110 Sum_probs=27.1
Q ss_pred eeeeeeccCceeeeecCCCCChhhhHHHHHH
Q 015796 152 DVMNSIARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 152 D~l~pigkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
|.-+.+.+|+-++|.|+.|+|||||+.+++.
T Consensus 665 dvsl~~~~g~i~~ItGPNGaGKSTlLr~i~~ 695 (918)
T 3thx_B 665 NTDLSEDSERVMIITGPNMGGKSSYIKQVAL 695 (918)
T ss_dssp EEEECTTSCCEEEEESCCCHHHHHHHHHHHH
T ss_pred cccccCCCCeEEEEECCCCCchHHHHHHHHH
Confidence 6667778899999999999999999988753
No 433
>2j0v_A RAC-like GTP-binding protein ARAC7; nucleotide-binding protein, ROP9, atrac7, membrane, palmitate, RHO GTPase; HET: GDP; 1.78A {Arabidopsis thaliana}
Probab=76.09 E-value=1.4 Score=38.58 Aligned_cols=23 Identities=4% Similarity=-0.084 Sum_probs=19.9
Q ss_pred ceeeeecCCCCChhhhHHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
-|+.++|.+|+|||+|+..+...
T Consensus 10 ~ki~i~G~~~~GKTsli~~l~~~ 32 (212)
T 2j0v_A 10 IKCVTVGDGAVGKTCMLICYTSN 32 (212)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHhcC
Confidence 37899999999999999887653
No 434
>2h57_A ADP-ribosylation factor-like protein 6; GTP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GTP; 2.00A {Homo sapiens}
Probab=76.00 E-value=1.1 Score=38.43 Aligned_cols=23 Identities=4% Similarity=0.013 Sum_probs=19.5
Q ss_pred ceeeeecCCCCChhhhHHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
-|+.++|.+|+|||+|+..+...
T Consensus 22 ~ki~v~G~~~~GKSsli~~l~~~ 44 (190)
T 2h57_A 22 VHVLCLGLDNSGKTTIINKLKPS 44 (190)
T ss_dssp EEEEEEECTTSSHHHHHHHTSCG
T ss_pred cEEEEECCCCCCHHHHHHHHhcC
Confidence 47999999999999999877543
No 435
>1ypw_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48; HET: ADP ANP; 3.50A {Mus musculus} PDB: 1oz4_A* 1yq0_A* 1yqi_A* 1r7r_A* 3cf2_A* 3cf1_A* 3cf3_A*
Probab=75.89 E-value=1.4 Score=48.06 Aligned_cols=30 Identities=20% Similarity=0.370 Sum_probs=25.2
Q ss_pred eeccCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 156 SIARGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 156 pigkGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
.+..|..++|.|++|+|||+|+..|+...+
T Consensus 234 ~i~~~~~vLL~Gp~GtGKTtLarala~~l~ 263 (806)
T 1ypw_A 234 GVKPPRGILLYGPPGTGKTLIARAVANETG 263 (806)
T ss_dssp CCCCCCEEEECSCTTSSHHHHHHHHHHTTT
T ss_pred CCCCCCeEEEECcCCCCHHHHHHHHHHHcC
Confidence 356788899999999999999999876543
No 436
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=75.68 E-value=1.5 Score=41.63 Aligned_cols=23 Identities=4% Similarity=0.242 Sum_probs=20.3
Q ss_pred eeeeecCCCCChhhhHHHHHHHh
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+++.|++|+|||+++..+++..
T Consensus 60 ~~ll~G~~G~GKT~la~~la~~l 82 (353)
T 1sxj_D 60 HMLFYGPPGTGKTSTILALTKEL 82 (353)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 49999999999999998887764
No 437
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A*
Probab=75.56 E-value=1.4 Score=40.43 Aligned_cols=25 Identities=12% Similarity=0.215 Sum_probs=21.4
Q ss_pred CceeeeecCCCCChhhhHHHHHHHh
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+.-+.|.|++|+|||+|+..+++..
T Consensus 29 ~~~vll~G~~GtGKt~la~~i~~~~ 53 (265)
T 2bjv_A 29 DKPVLIIGERGTGKELIASRLHYLS 53 (265)
T ss_dssp CSCEEEECCTTSCHHHHHHHHHHTS
T ss_pred CCCEEEECCCCCcHHHHHHHHHHhc
Confidence 3568999999999999999887654
No 438
>4dkx_A RAS-related protein RAB-6A; GTP binding fold, membrane trafficking, GTP, cytosol, protei transport; HET: GDP; 1.90A {Homo sapiens} PDB: 3bbp_A*
Probab=75.41 E-value=1.5 Score=39.66 Aligned_cols=22 Identities=5% Similarity=0.155 Sum_probs=19.3
Q ss_pred ceeeeecCCCCChhhhHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~ 182 (400)
-|+.++|.+|||||+|+..+..
T Consensus 14 ~KivlvGd~~VGKTsLi~r~~~ 35 (216)
T 4dkx_A 14 FKLVFLGEQSVGKTSLITRFMY 35 (216)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEEECcCCcCHHHHHHHHHh
Confidence 3799999999999999987754
No 439
>2gno_A DNA polymerase III, gamma subunit-related protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: DNA; 2.00A {Thermotoga maritima} SCOP: a.80.1.1 c.37.1.20
Probab=75.35 E-value=5.6 Score=37.91 Aligned_cols=74 Identities=8% Similarity=0.038 Sum_probs=40.9
Q ss_pred CceeeeecCCCCChhhhHHHHHHHhccchhhcccccccccCCCCCeEEEEEEec-cc-hHHHHHHHHHhhhcCC-CccEE
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMG-VN-METAQFFKRDFEENGS-MERVT 236 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iG-er-~e~~~~~~~~l~~~g~-l~~t~ 236 (400)
..-+++.|++|+|||+++..+++..+.+.. ++ .+ +..+-+-| +. -+.+..+.+.+..... -++.+
T Consensus 18 ~~~~Lf~Gp~G~GKtt~a~~la~~~~~~~~---------~~--~d-~~~l~~~~~~~~id~ir~li~~~~~~p~~~~~kv 85 (305)
T 2gno_A 18 GISILINGEDLSYPREVSLELPEYVEKFPP---------KA--SD-VLEIDPEGENIGIDDIRTIKDFLNYSPELYTRKY 85 (305)
T ss_dssp SEEEEEECSSSSHHHHHHHHHHHHHHTSCC---------CT--TT-EEEECCSSSCBCHHHHHHHHHHHTSCCSSSSSEE
T ss_pred CcEEEEECCCCCCHHHHHHHHHHhCchhhc---------cC--CC-EEEEcCCcCCCCHHHHHHHHHHHhhccccCCceE
Confidence 346788999999999999888875321100 11 22 33333333 22 3445555555543332 23667
Q ss_pred EEEeCCCCC
Q 015796 237 LFLNLANDP 245 (400)
Q Consensus 237 vv~~t~~~~ 245 (400)
+|+..++.-
T Consensus 86 viIdead~l 94 (305)
T 2gno_A 86 VIVHDCERM 94 (305)
T ss_dssp EEETTGGGB
T ss_pred EEeccHHHh
Confidence 776665543
No 440
>2wsm_A Hydrogenase expression/formation protein (HYPB); metal binding protein; 2.30A {Archaeoglobus fulgidus}
Probab=75.28 E-value=1.6 Score=38.39 Aligned_cols=25 Identities=8% Similarity=0.132 Sum_probs=21.0
Q ss_pred CceeeeecCCCCChhhhHHHHHHHh
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
--++.|.|.+|+|||||+..++.+.
T Consensus 30 ~~~i~i~G~~g~GKTTl~~~l~~~~ 54 (221)
T 2wsm_A 30 TVAVNIMGAIGSGKTLLIERTIERI 54 (221)
T ss_dssp CEEEEEEECTTSCHHHHHHHHHHHH
T ss_pred ceEEEEEcCCCCCHHHHHHHHHHHh
Confidence 3468999999999999998887653
No 441
>2g3y_A GTP-binding protein GEM; small GTPase, GDP, inactive state, RGK family, structur genomics, structural genomics consortium, SGC, signaling PR; HET: GDP; 2.40A {Homo sapiens} SCOP: c.37.1.8
Probab=75.25 E-value=1.5 Score=39.32 Aligned_cols=21 Identities=14% Similarity=0.322 Sum_probs=18.7
Q ss_pred ceeeeecCCCCChhhhHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQIC 181 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~ 181 (400)
-|+.|.|.+|+|||+|+..+.
T Consensus 38 ~kVvlvG~~~vGKSSLl~r~~ 58 (211)
T 2g3y_A 38 YRVVLIGEQGVGKSTLANIFA 58 (211)
T ss_dssp EEEEEECCTTSSHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHH
Confidence 379999999999999998765
No 442
>2h92_A Cytidylate kinase; rossmann fold, transferase; HET: C5P PG4; 2.30A {Staphylococcus aureus}
Probab=75.21 E-value=1.7 Score=38.50 Aligned_cols=25 Identities=20% Similarity=0.226 Sum_probs=21.2
Q ss_pred CceeeeecCCCCChhhhHHHHHHHh
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+..+.|.|++|+||||+...+++.-
T Consensus 3 ~~~i~i~G~~gsGkst~~~~l~~~~ 27 (219)
T 2h92_A 3 AINIALDGPAAAGKSTIAKRVASEL 27 (219)
T ss_dssp CCCEEEECCTTSSHHHHHHHHHHHT
T ss_pred ceEEEEECCCCCCHHHHHHHHHHhc
Confidence 4568999999999999999887753
No 443
>2j1l_A RHO-related GTP-binding protein RHOD; GTPase, membrane, prenylation, hydrolase, nucleotide-binding, methylation, lipoprotein, endosome DYNA; HET: GDP; 2.5A {Homo sapiens}
Probab=75.10 E-value=1.5 Score=38.69 Aligned_cols=22 Identities=14% Similarity=0.200 Sum_probs=19.2
Q ss_pred ceeeeecCCCCChhhhHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~ 182 (400)
-|+.++|.+|+|||+|+..+..
T Consensus 35 ~ki~vvG~~~vGKSsli~~l~~ 56 (214)
T 2j1l_A 35 VKVVLVGDGGCGKTSLLMVFAD 56 (214)
T ss_dssp EEEEEEECTTSSHHHHHHHHHC
T ss_pred EEEEEECcCCCCHHHHHHHHHc
Confidence 3799999999999999988753
No 444
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=75.03 E-value=1.4 Score=41.32 Aligned_cols=21 Identities=14% Similarity=0.219 Sum_probs=19.0
Q ss_pred eeeeecCCCCChhhhHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~ 182 (400)
.++|.|++|+||||++..++.
T Consensus 77 iI~I~G~~GSGKSTva~~La~ 97 (281)
T 2f6r_A 77 VLGLTGISGSGKSSVAQRLKN 97 (281)
T ss_dssp EEEEEECTTSCHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 589999999999999999874
No 445
>2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A*
Probab=74.80 E-value=1.8 Score=43.59 Aligned_cols=26 Identities=23% Similarity=0.423 Sum_probs=22.7
Q ss_pred CceeeeecCCCCChhhhHHHHHHHhc
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
+..+++.|++|+|||+|+..+++..+
T Consensus 63 ~~~iLl~GppGtGKT~la~ala~~l~ 88 (456)
T 2c9o_A 63 GRAVLLAGPPGTGKTALALAIAQELG 88 (456)
T ss_dssp TCEEEEECCTTSSHHHHHHHHHHHHC
T ss_pred CCeEEEECCCcCCHHHHHHHHHHHhC
Confidence 45699999999999999999988765
No 446
>1um8_A ATP-dependent CLP protease ATP-binding subunit CL; CLPP binding loop, chaperone; HET: ADP; 2.60A {Helicobacter pylori} SCOP: c.37.1.20
Probab=74.73 E-value=1.7 Score=42.27 Aligned_cols=26 Identities=15% Similarity=0.257 Sum_probs=22.0
Q ss_pred CceeeeecCCCCChhhhHHHHHHHhc
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
..-+++.|++|+|||+++..+++..+
T Consensus 72 ~~~ill~Gp~GtGKT~la~~la~~l~ 97 (376)
T 1um8_A 72 KSNILLIGPTGSGKTLMAQTLAKHLD 97 (376)
T ss_dssp CCCEEEECCTTSSHHHHHHHHHHHTT
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHhC
Confidence 34589999999999999999987653
No 447
>2qu8_A Putative nucleolar GTP-binding protein 1; GTPase, malaria, structural genomics, structural genomics consortium, SGC, unknown function; HET: GDP; 2.01A {Plasmodium falciparum}
Probab=74.31 E-value=1.6 Score=38.97 Aligned_cols=22 Identities=18% Similarity=0.238 Sum_probs=19.3
Q ss_pred ceeeeecCCCCChhhhHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~ 182 (400)
-|+.++|.+|+|||+|+..+..
T Consensus 30 ~kI~vvG~~~vGKSsLin~l~~ 51 (228)
T 2qu8_A 30 KTIILSGAPNVGKSSFMNIVSR 51 (228)
T ss_dssp EEEEEECSTTSSHHHHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHhC
Confidence 4799999999999999988753
No 448
>3llu_A RAS-related GTP-binding protein C; structural genomics consortium, SGC, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; HET: GNP; 1.40A {Homo sapiens} PDB: 2q3f_A*
Probab=74.29 E-value=1.6 Score=37.87 Aligned_cols=22 Identities=14% Similarity=0.157 Sum_probs=18.7
Q ss_pred ceeeeecCCCCChhhhHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~ 182 (400)
-|+.++|.+|+|||+|+..+..
T Consensus 21 ~ki~~vG~~~vGKTsLi~~l~~ 42 (196)
T 3llu_A 21 PRILLMGLRRSGKSSIQKVVFH 42 (196)
T ss_dssp CEEEEEESTTSSHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHHh
Confidence 4799999999999999876543
No 449
>3cpj_B GTP-binding protein YPT31/YPT8; RAB GTPase, prenylation, vesicular transport, acetylation, golgi apparatus, lipoprotein, membrane; HET: GDP; 2.35A {Saccharomyces cerevisiae}
Probab=74.09 E-value=1.7 Score=38.63 Aligned_cols=22 Identities=18% Similarity=0.439 Sum_probs=19.5
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+...
T Consensus 15 ki~v~G~~~vGKSsli~~l~~~ 36 (223)
T 3cpj_B 15 KIVLIGDSGVGKSNLLSRFTKN 36 (223)
T ss_dssp EEEEESCTTSSHHHHHHHHHHC
T ss_pred EEEEECcCCCCHHHHHHHHhcC
Confidence 7899999999999999887653
No 450
>2yc2_C IFT27, small RAB-related GTPase; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_C
Probab=73.87 E-value=0.88 Score=39.31 Aligned_cols=23 Identities=9% Similarity=0.196 Sum_probs=5.0
Q ss_pred ceeeeecCCCCChhhhHHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
-|+.++|.+|+|||+|+..+..+
T Consensus 21 ~~i~v~G~~~~GKssli~~l~~~ 43 (208)
T 2yc2_C 21 CKVAVVGEATVGKSALISMFTSK 43 (208)
T ss_dssp EEEEEC-----------------
T ss_pred eEEEEECCCCCCHHHHHHHHHhC
Confidence 47999999999999999877544
No 451
>1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G
Probab=73.84 E-value=1.3 Score=42.10 Aligned_cols=25 Identities=8% Similarity=0.121 Sum_probs=21.5
Q ss_pred ceeeeecCCCCChhhhHHHHHHHhc
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
.-++|.|++|+|||+|+..+++...
T Consensus 46 ~~vLl~G~~GtGKT~la~~la~~~~ 70 (350)
T 1g8p_A 46 GGVLVFGDRGTGKSTAVRALAALLP 70 (350)
T ss_dssp CCEEEECCGGGCTTHHHHHHHHHSC
T ss_pred ceEEEECCCCccHHHHHHHHHHhCc
Confidence 3499999999999999999887654
No 452
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=73.83 E-value=1.4 Score=44.37 Aligned_cols=20 Identities=10% Similarity=0.267 Sum_probs=17.9
Q ss_pred eeeecCCCCChhhhHHHHHH
Q 015796 163 IPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 163 ~~I~g~~G~GKt~L~~~i~~ 182 (400)
++|.|++|+|||||+..++.
T Consensus 34 I~lvG~sGaGKSTLln~L~g 53 (418)
T 2qag_C 34 LMVVGESGLGKSTLINSLFL 53 (418)
T ss_dssp EEEECCTTSSHHHHHHHHTT
T ss_pred EEEECCCCCcHHHHHHHHhC
Confidence 39999999999999998864
No 453
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20
Probab=73.64 E-value=2.1 Score=39.88 Aligned_cols=24 Identities=13% Similarity=0.253 Sum_probs=20.8
Q ss_pred ceeeeecCCCCChhhhHHHHHHHh
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
..+++.|++|+|||+++..+++..
T Consensus 47 ~~~ll~G~~G~GKT~la~~l~~~l 70 (327)
T 1iqp_A 47 PHLLFAGPPGVGKTTAALALAREL 70 (327)
T ss_dssp CEEEEESCTTSSHHHHHHHHHHHH
T ss_pred CeEEEECcCCCCHHHHHHHHHHHh
Confidence 359999999999999999888763
No 454
>2xtp_A GTPase IMAP family member 2; immune system, G protein; HET: MSE; 1.50A {Homo sapiens} PDB: 2xto_A* 2xtm_A* 2xtn_A* 3p1j_A
Probab=73.62 E-value=1.7 Score=39.72 Aligned_cols=23 Identities=22% Similarity=0.302 Sum_probs=20.2
Q ss_pred ceeeeecCCCCChhhhHHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
-|++|+|.+|+|||+|+..+...
T Consensus 23 ~~I~lvG~~g~GKStl~n~l~~~ 45 (260)
T 2xtp_A 23 LRIILVGKTGTGKSAAGNSILRK 45 (260)
T ss_dssp EEEEEEECTTSCHHHHHHHHHTS
T ss_pred eEEEEECCCCCCHHHHHHHHhCC
Confidence 47999999999999999888654
No 455
>1tue_A Replication protein E1; helicase, replication, E1E2 complex, AAA+ protein; 2.10A {Human papillomavirus type 18} SCOP: c.37.1.20
Probab=73.46 E-value=1.6 Score=39.88 Aligned_cols=27 Identities=4% Similarity=-0.004 Sum_probs=21.5
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.|...++|.|++|+|||+++..+++..
T Consensus 56 Pkkn~ili~GPPGtGKTt~a~ala~~l 82 (212)
T 1tue_A 56 PKKNCLVFCGPANTGKSYFGMSFIHFI 82 (212)
T ss_dssp TTCSEEEEESCGGGCHHHHHHHHHHHH
T ss_pred CcccEEEEECCCCCCHHHHHHHHHHHh
Confidence 343469999999999999988877653
No 456
>3co5_A Putative two-component system transcriptional RES regulator; structural genomics, APC89341.1; 2.40A {Neisseria gonorrhoeae}
Probab=73.22 E-value=0.6 Score=39.08 Aligned_cols=22 Identities=23% Similarity=0.276 Sum_probs=18.1
Q ss_pred CceeeeecCCCCChhhhHHHHH
Q 015796 160 GQKIPLFSAAGLPHNEIAAQIC 181 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~ 181 (400)
+.-+.|.|++|+|||+++..|+
T Consensus 27 ~~~vll~G~~GtGKt~lA~~i~ 48 (143)
T 3co5_A 27 TSPVFLTGEAGSPFETVARYFH 48 (143)
T ss_dssp SSCEEEEEETTCCHHHHHGGGC
T ss_pred CCcEEEECCCCccHHHHHHHHH
Confidence 4558999999999999976653
No 457
>1ewq_A DNA mismatch repair protein MUTS; multiple domains of protein, mostly mixed alpha-beta structures, one domain is entirely helical; HET: DNA; 2.20A {Thermus aquaticus} SCOP: a.113.1.1 c.37.1.12 c.55.6.1 d.75.2.1 PDB: 1nne_A* 1fw6_A* 1ewr_A*
Probab=73.17 E-value=2 Score=46.48 Aligned_cols=23 Identities=4% Similarity=-0.074 Sum_probs=21.3
Q ss_pred CceeeeecCCCCChhhhHHHHHH
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
|+.++|.|++|+|||||+.+|+.
T Consensus 576 g~i~~I~GpNGsGKSTlLr~iag 598 (765)
T 1ewq_A 576 HELVLITGPNMAGKSTFLRQTAL 598 (765)
T ss_dssp SCEEEEESCSSSSHHHHHHHHHH
T ss_pred CcEEEEECCCCCChHHHHHHHHh
Confidence 99999999999999999998764
No 458
>3b1v_A Ferrous iron uptake transporter protein B; G protein, iron transport, GTPase, transmembrane, potassium; HET: GGM; 1.85A {Streptococcus thermophilus} PDB: 3b1w_A* 3lx5_A* 3lx8_A* 3ss8_A* 3b1z_A 3b1y_A* 3b1x_A* 3tah_A*
Probab=73.17 E-value=1.8 Score=40.64 Aligned_cols=22 Identities=14% Similarity=0.154 Sum_probs=19.6
Q ss_pred ceeeeecCCCCChhhhHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~ 182 (400)
-|+.+.|.+|+|||+|+..++.
T Consensus 4 ~kI~lvG~~nvGKSTL~n~L~g 25 (272)
T 3b1v_A 4 TEIALIGNPNSGKTSLFNLITG 25 (272)
T ss_dssp EEEEEECCTTSSHHHHHHHHHC
T ss_pred eEEEEECCCCCCHHHHHHHHHC
Confidence 4789999999999999988864
No 459
>3t5d_A Septin-7; GTP-binding protein, cytoskeleton, signaling protein; HET: GDP; 3.30A {Homo sapiens} PDB: 3tw4_A*
Probab=72.43 E-value=1.8 Score=40.20 Aligned_cols=25 Identities=12% Similarity=0.355 Sum_probs=17.7
Q ss_pred eeccCc--eeeeecCCCCChhhhHHHH
Q 015796 156 SIARGQ--KIPLFSAAGLPHNEIAAQI 180 (400)
Q Consensus 156 pigkGq--r~~I~g~~G~GKt~L~~~i 180 (400)
|+-+|. ++.++|.+|+|||+|+..|
T Consensus 2 p~~~g~~~~I~vvG~~g~GKSTLin~L 28 (274)
T 3t5d_A 2 PLGSGFEFTLMVVGESGLGKSTLINSL 28 (274)
T ss_dssp -----CEEEEEEEECTTSSHHHHHHHH
T ss_pred CCcCccEEEEEEECCCCCCHHHHHHHH
Confidence 444553 5899999999999999775
No 460
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*
Probab=72.38 E-value=2.2 Score=40.48 Aligned_cols=26 Identities=15% Similarity=0.023 Sum_probs=22.9
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHh
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+|+.+++.|..|+||||++..++..-
T Consensus 97 ~~~~i~i~g~~G~GKTT~~~~la~~~ 122 (295)
T 1ls1_A 97 DRNLWFLVGLQGSGKTTTAAKLALYY 122 (295)
T ss_dssp SSEEEEEECCTTTTHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 88999999999999999998887553
No 461
>3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A*
Probab=72.28 E-value=4.6 Score=43.99 Aligned_cols=23 Identities=26% Similarity=0.468 Sum_probs=20.5
Q ss_pred eeeecCCCCChhhhHHHHHHHhc
Q 015796 163 IPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 163 ~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
+++.|++|+|||+|+..+++..+
T Consensus 241 ILL~GPPGTGKT~LAraiA~elg 263 (806)
T 3cf2_A 241 ILLYGPPGTGKTLIARAVANETG 263 (806)
T ss_dssp EEEECCTTSCHHHHHHHHHTTTT
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 89999999999999999887654
No 462
>2x77_A ADP-ribosylation factor; GTP-binding protein, small GTPase, nucleotide-binding; HET: GDP; 2.10A {Leishmania major}
Probab=72.14 E-value=1.4 Score=37.69 Aligned_cols=22 Identities=5% Similarity=0.104 Sum_probs=19.0
Q ss_pred CceeeeecCCCCChhhhHHHHH
Q 015796 160 GQKIPLFSAAGLPHNEIAAQIC 181 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~ 181 (400)
--|+.++|.+|+|||+|+..+.
T Consensus 22 ~~~i~v~G~~~~GKssli~~l~ 43 (189)
T 2x77_A 22 KIRVLMLGLDNAGKTSILYRLH 43 (189)
T ss_dssp CEEEEEEEETTSSHHHHHHHTC
T ss_pred ceEEEEECCCCCCHHHHHHHHH
Confidence 4579999999999999997763
No 463
>3lxw_A GTPase IMAP family member 1; immunity, structural genomics consortium, SGC, immune system; HET: GDP; 2.21A {Homo sapiens} PDB: 3v70_A*
Probab=71.33 E-value=2.1 Score=39.18 Aligned_cols=22 Identities=14% Similarity=0.237 Sum_probs=19.3
Q ss_pred ceeeeecCCCCChhhhHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~ 182 (400)
-|++++|.+|+|||+|+..|..
T Consensus 22 l~I~lvG~~g~GKSSlin~l~~ 43 (247)
T 3lxw_A 22 RRLILVGRTGAGKSATGNSILG 43 (247)
T ss_dssp EEEEEESSTTSSHHHHHHHHHT
T ss_pred eEEEEECCCCCcHHHHHHHHhC
Confidence 4789999999999999988754
No 464
>1mky_A Probable GTP-binding protein ENGA; GTPase, DER, KH-domain, tandem G-domains, ligand binding protein; HET: GDP; 1.90A {Thermotoga maritima} SCOP: c.37.1.8 c.37.1.8 d.52.5.1
Probab=71.08 E-value=2 Score=42.90 Aligned_cols=23 Identities=9% Similarity=0.205 Sum_probs=20.2
Q ss_pred ceeeeecCCCCChhhhHHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
-|++|.|.+|+|||||+..+...
T Consensus 181 ~kvaivG~~gvGKSTLln~l~g~ 203 (439)
T 1mky_A 181 IKVAIVGRPNVGKSTLFNAILNK 203 (439)
T ss_dssp EEEEEECSTTSSHHHHHHHHHTS
T ss_pred ceEEEECCCCCCHHHHHHHHhCC
Confidence 48999999999999999988654
No 465
>3tqf_A HPR(Ser) kinase; transferase, hydrolase; 2.80A {Coxiella burnetii}
Probab=70.89 E-value=3.7 Score=36.63 Aligned_cols=27 Identities=7% Similarity=0.156 Sum_probs=22.6
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
..|.-++|.|++|+|||||+..+.+..
T Consensus 14 v~G~gvli~G~SGaGKStlal~L~~rG 40 (181)
T 3tqf_A 14 IDKMGVLITGEANIGKSELSLALIDRG 40 (181)
T ss_dssp ETTEEEEEEESSSSSHHHHHHHHHHTT
T ss_pred ECCEEEEEEcCCCCCHHHHHHHHHHcC
Confidence 557779999999999999988877643
No 466
>1jal_A YCHF protein; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; 2.40A {Haemophilus influenzae} SCOP: c.37.1.8 d.15.10.2
Probab=70.86 E-value=2.3 Score=41.94 Aligned_cols=24 Identities=8% Similarity=0.192 Sum_probs=21.3
Q ss_pred CceeeeecCCCCChhhhHHHHHHH
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|-|++|.|.+|+|||||+..+...
T Consensus 2 ~~kI~IVG~pnvGKSTL~n~Lt~~ 25 (363)
T 1jal_A 2 GFKCGIVGLPNVGKSTLFNALTKA 25 (363)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHHCC
Confidence 568999999999999999998754
No 467
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A
Probab=70.45 E-value=2.5 Score=39.21 Aligned_cols=23 Identities=13% Similarity=0.213 Sum_probs=20.2
Q ss_pred eeeeecCCCCChhhhHHHHHHHh
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+++.|++|+|||+++..+++..
T Consensus 40 ~~ll~G~~G~GKt~la~~l~~~l 62 (319)
T 2chq_A 40 HLLFSGPPGTGKTATAIALARDL 62 (319)
T ss_dssp CEEEESSSSSSHHHHHHHHHHHH
T ss_pred eEEEECcCCcCHHHHHHHHHHHh
Confidence 48999999999999998887763
No 468
>3a1s_A Iron(II) transport protein B; FEOB, iron transporter, small GTPase, G protein, GDI; HET: GDP; 1.50A {Thermotoga maritima} PDB: 3a1t_A* 3a1u_A* 3a1v_A* 3a1w_A
Probab=70.44 E-value=2.3 Score=39.43 Aligned_cols=21 Identities=10% Similarity=0.203 Sum_probs=19.0
Q ss_pred eeeeecCCCCChhhhHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~ 182 (400)
|++++|.+|+|||+|+..+..
T Consensus 7 kI~lvG~~nvGKTsL~n~l~g 27 (258)
T 3a1s_A 7 KVALAGCPNVGKTSLFNALTG 27 (258)
T ss_dssp EEEEECCTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHC
Confidence 689999999999999988864
No 469
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=70.23 E-value=20 Score=36.79 Aligned_cols=27 Identities=7% Similarity=0.100 Sum_probs=21.1
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+...+.|.|.+|+||||++..|+...
T Consensus 99 ~~~~vI~ivG~~GvGKTTl~~kLA~~l 125 (504)
T 2j37_W 99 GKQNVIMFVGLQGSGKTTTCSKLAYYY 125 (504)
T ss_dssp S--EEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 345578999999999999998887654
No 470
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=70.15 E-value=2.3 Score=39.67 Aligned_cols=22 Identities=14% Similarity=0.113 Sum_probs=19.3
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
.+.|.|.+|+||||+...+++.
T Consensus 4 ~I~l~G~~GsGKST~a~~L~~~ 25 (301)
T 1ltq_A 4 IILTIGCPGSGKSTWAREFIAK 25 (301)
T ss_dssp EEEEECCTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHh
Confidence 4788999999999999998863
No 471
>1ypw_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48; HET: ADP ANP; 3.50A {Mus musculus} PDB: 1oz4_A* 1yq0_A* 1yqi_A* 1r7r_A* 3cf2_A* 3cf1_A* 3cf3_A*
Probab=69.97 E-value=1.9 Score=46.95 Aligned_cols=29 Identities=10% Similarity=0.281 Sum_probs=24.9
Q ss_pred eccCceeeeecCCCCChhhhHHHHHHHhc
Q 015796 157 IARGQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 157 igkGqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
+..+..+++.|++|+|||+|+..++...+
T Consensus 508 ~~~~~~vLL~GppGtGKT~Lakala~~~~ 536 (806)
T 1ypw_A 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQ 536 (806)
T ss_dssp CCCCCCCCCBCCTTSSHHHHHHHHHHHHT
T ss_pred CCCCceeEEECCCCCCHHHHHHHHHHHhC
Confidence 44677799999999999999999987764
No 472
>3upu_A ATP-dependent DNA helicase DDA; RECA-like domain, SH3 domain, PIN-tower interface, coupling hydrolysis to DNA unwinding, ssDNA; 3.30A {Enterobacteria phage T4}
Probab=69.94 E-value=2.3 Score=42.79 Aligned_cols=23 Identities=13% Similarity=0.179 Sum_probs=19.7
Q ss_pred eeeeecCCCCChhhhHHHHHHHh
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
-+.|.|++|+|||+++..+++..
T Consensus 47 ~~li~G~aGTGKT~ll~~~~~~l 69 (459)
T 3upu_A 47 HVTINGPAGTGATTLTKFIIEAL 69 (459)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHH
Confidence 78999999999999988776543
No 473
>1qhl_A Protein (cell division protein MUKB); SMC, chromosome partitioning; 2.20A {Escherichia coli} SCOP: c.37.1.12
Probab=69.93 E-value=0.8 Score=42.16 Aligned_cols=23 Identities=13% Similarity=0.070 Sum_probs=19.7
Q ss_pred ceeeeecCCCCChhhhHHHHHHH
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+..+|.|++|+|||||+..|+.-
T Consensus 28 ~~~~i~GpnGsGKSTll~~i~g~ 50 (227)
T 1qhl_A 28 LVTTLSGGNGAGKSTTMAAFVTA 50 (227)
T ss_dssp HHHHHHSCCSHHHHHHHHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHhcc
Confidence 56789999999999999988643
No 474
>3hu3_A Transitional endoplasmic reticulum ATPase; VCP, transport protein; HET: AGS; 2.20A {Homo sapiens} PDB: 3hu2_A* 3hu1_A* 1e32_A* 1s3s_A*
Probab=69.90 E-value=2.7 Score=42.93 Aligned_cols=26 Identities=23% Similarity=0.399 Sum_probs=21.8
Q ss_pred CceeeeecCCCCChhhhHHHHHHHhc
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
..-++|.|++|+|||+|+..|++..+
T Consensus 238 ~~~vLL~GppGtGKT~lAraia~~~~ 263 (489)
T 3hu3_A 238 PRGILLYGPPGTGKTLIARAVANETG 263 (489)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHCS
T ss_pred CCcEEEECcCCCCHHHHHHHHHHHhC
Confidence 34599999999999999999877643
No 475
>1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=69.89 E-value=2.6 Score=39.09 Aligned_cols=23 Identities=4% Similarity=0.130 Sum_probs=20.2
Q ss_pred eeeeecCCCCChhhhHHHHHHHh
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
.+.+.|++|+|||+++..+++..
T Consensus 44 ~~ll~G~~G~GKt~la~~l~~~l 66 (323)
T 1sxj_B 44 HMIISGMPGIGKTTSVHCLAHEL 66 (323)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHH
T ss_pred eEEEECcCCCCHHHHHHHHHHHh
Confidence 38999999999999999888763
No 476
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=69.76 E-value=2.8 Score=42.91 Aligned_cols=25 Identities=16% Similarity=0.377 Sum_probs=21.9
Q ss_pred ceeeeecCCCCChhhhHHHHHHHhc
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
.-++|.|++|+|||+++..+++..+
T Consensus 78 ~~lLL~GppGtGKTtla~~la~~l~ 102 (516)
T 1sxj_A 78 RAAMLYGPPGIGKTTAAHLVAQELG 102 (516)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHTT
T ss_pred cEEEEECCCCCCHHHHHHHHHHHcC
Confidence 5689999999999999999987754
No 477
>3gj0_A GTP-binding nuclear protein RAN; G protein, GDP, acetylation, cytoplasm, HOST- virus interaction, nucleotide-binding, nucleus, phosphoprotein; HET: GDP; 1.48A {Homo sapiens} SCOP: c.37.1.8 PDB: 3gj3_A* 3gj5_A* 3gj4_A* 3gj6_A* 3gj7_A* 3gj8_A* 1i2m_A 1a2k_C 1ibr_A* 1k5d_A* 1k5g_A* 1qbk_C* 3a6p_C* 3ch5_A* 4gmx_A* 4gpt_A* 4hat_A* 4hau_A* 4hav_A* 4haw_A* ...
Probab=69.74 E-value=1.4 Score=38.91 Aligned_cols=20 Identities=15% Similarity=0.204 Sum_probs=17.5
Q ss_pred eeeeecCCCCChhhhHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQIC 181 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~ 181 (400)
|+.++|.+|+|||+|+..+.
T Consensus 17 ki~v~G~~~~GKSsli~~~~ 36 (221)
T 3gj0_A 17 KLVLVGDGGTGKTTFVKRHL 36 (221)
T ss_dssp EEEEEECTTSSHHHHHTTBH
T ss_pred EEEEECCCCCCHHHHHHHHH
Confidence 68999999999999987743
No 478
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=69.46 E-value=2.5 Score=41.39 Aligned_cols=24 Identities=8% Similarity=0.231 Sum_probs=20.9
Q ss_pred eeeeecCCCCChhhhHHHHHHHhc
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
-++|.|++|+|||+|...|+..-+
T Consensus 9 lI~I~GptgSGKTtla~~La~~l~ 32 (340)
T 3d3q_A 9 LIVIVGPTASGKTELSIEVAKKFN 32 (340)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHTT
T ss_pred eEEEECCCcCcHHHHHHHHHHHcC
Confidence 478999999999999999987644
No 479
>3i8s_A Ferrous iron transport protein B; GTPase, GPCR, iron uptake, FEO, cell inner membrane, cell ME GTP-binding, ION transport, membrane; 1.80A {Escherichia coli} PDB: 3i8x_A* 3i92_A* 3hyr_A 3hyt_A* 2wic_A* 2wib_A* 2wia_A*
Probab=69.36 E-value=2.1 Score=39.99 Aligned_cols=22 Identities=14% Similarity=0.154 Sum_probs=19.5
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+++++|.+|+|||+|+..+..+
T Consensus 5 ~I~lvG~~n~GKSTLin~l~g~ 26 (274)
T 3i8s_A 5 TIGLIGNPNSGKTTLFNQLTGS 26 (274)
T ss_dssp EEEEEECTTSSHHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 6899999999999999888654
No 480
>2dby_A GTP-binding protein; GDP, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: GDP; 1.76A {Thermus thermophilus} PDB: 2dwq_A
Probab=69.33 E-value=2.3 Score=42.00 Aligned_cols=22 Identities=5% Similarity=0.188 Sum_probs=19.8
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
+++|.|.+|+|||||+..+.+.
T Consensus 3 ~v~IVG~pnvGKSTL~n~L~~~ 24 (368)
T 2dby_A 3 AVGIVGLPNVGKSTLFNALTRA 24 (368)
T ss_dssp SEEEECCSSSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 6899999999999999988765
No 481
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B*
Probab=69.31 E-value=2.8 Score=39.91 Aligned_cols=24 Identities=13% Similarity=0.178 Sum_probs=20.5
Q ss_pred eeeeecCCCCChhhhHHHHHHHhc
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
-++|.|++|+|||+++..+++...
T Consensus 40 ~~ll~G~~G~GKT~la~~la~~l~ 63 (373)
T 1jr3_A 40 AYLFSGTRGVGKTSIARLLAKGLN 63 (373)
T ss_dssp EEEEESCTTSSHHHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHHhC
Confidence 478999999999999998887653
No 482
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=69.29 E-value=4.2 Score=40.43 Aligned_cols=25 Identities=8% Similarity=0.013 Sum_probs=20.3
Q ss_pred CceeeeecCCCCChhhhHHHHHHHh
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
..-+.+.|.+|+||||++..+++..
T Consensus 258 ~~lIil~G~pGSGKSTla~~L~~~~ 282 (416)
T 3zvl_A 258 PEVVVAVGFPGAGKSTFIQEHLVSA 282 (416)
T ss_dssp CCEEEEESCTTSSHHHHHHHHTGGG
T ss_pred CEEEEEECCCCCCHHHHHHHHHHhc
Confidence 3457788999999999998887554
No 483
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Probab=68.71 E-value=8.2 Score=41.15 Aligned_cols=92 Identities=13% Similarity=0.247 Sum_probs=0.0
Q ss_pred eeeecCCCCChhhhHHHHHHHhccchhhcccccccccCCCCCeEEEEEEeccchH------------------HHHHHHH
Q 015796 163 IPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNME------------------TAQFFKR 224 (400)
Q Consensus 163 ~~I~g~~G~GKt~L~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~V~~~iGer~e------------------~~~~~~~ 224 (400)
+++.|++|+|||+++..+++..+. .++.+-|.+-.+ +...+.+
T Consensus 491 ~ll~G~~GtGKT~la~~la~~l~~-------------------~~~~i~~s~~~~~~~~~~l~g~~~g~~g~~~~~~l~~ 551 (758)
T 1r6b_X 491 FLFAGPTGVGKTEVTVQLSKALGI-------------------ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTD 551 (758)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHTC-------------------EEEEEEGGGCSSSSCCSSSCCCCSCSHHHHHTTHHHH
T ss_pred EEEECCCCCcHHHHHHHHHHHhcC-------------------CEEEEechhhcchhhHhhhcCCCCCCcCccccchHHH
Q ss_pred HhhhcCCCccEEEEEeCCCCCHHHHHhHHHHHHHHHHHhhhhCC-----CeEEEEEcc
Q 015796 225 DFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECG-----KHVLVILTD 277 (400)
Q Consensus 225 ~l~~~g~l~~t~vv~~t~~~~~~~r~~a~~~a~tiAEyfr~d~G-----~~Vlli~Ds 277 (400)
.+.... +++++..-.+..+..-....+..+.-.++-. ..| +++++|+-+
T Consensus 552 ~~~~~~---~~vl~lDEi~~~~~~~~~~Ll~~le~~~~~~-~~g~~~~~~~~~iI~ts 605 (758)
T 1r6b_X 552 AVIKHP---HAVLLLDEIEKAHPDVFNILLQVMDNGTLTD-NNGRKADFRNVVLVMTT 605 (758)
T ss_dssp HHHHCS---SEEEEEETGGGSCHHHHHHHHHHHHHSEEEE-TTTEEEECTTEEEEEEE
T ss_pred HHHhCC---CcEEEEeCccccCHHHHHHHHHHhcCcEEEc-CCCCEEecCCeEEEEec
No 484
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis}
Probab=68.66 E-value=3 Score=42.17 Aligned_cols=26 Identities=19% Similarity=0.277 Sum_probs=21.7
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHh
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
...-++|.|++|+|||+|+..+++..
T Consensus 200 ~~~~~LL~G~pG~GKT~la~~la~~l 225 (468)
T 3pxg_A 200 TKNNPVLIGEPGVGKTAIAEGLAQQI 225 (468)
T ss_dssp SSCEEEEESCTTTTTHHHHHHHHHHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHHHH
Confidence 34457999999999999999888764
No 485
>3th5_A RAS-related C3 botulinum toxin substrate 1; rossmann fold, GTPase, GTP binding, protein binding, signali protein; HET: GNP; 2.30A {Homo sapiens}
Probab=71.58 E-value=1 Score=39.19 Aligned_cols=23 Identities=4% Similarity=0.024 Sum_probs=19.6
Q ss_pred cCceeeeecCCCCChhhhHHHHH
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQIC 181 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~ 181 (400)
+.=|+.++|.+|+|||+|+..+.
T Consensus 29 ~~~ki~v~G~~~~GKSsli~~l~ 51 (204)
T 3th5_A 29 QAIKCVVVGDGAVGKTCLLISYT 51 (204)
Confidence 44579999999999999997765
No 486
>3iby_A Ferrous iron transport protein B; G protein, G domain, iron uptake, cell inner membrane, cell GTP-binding, ION transport, membrane; 2.50A {Legionella pneumophila}
Probab=68.42 E-value=2.6 Score=39.02 Aligned_cols=22 Identities=5% Similarity=0.057 Sum_probs=19.4
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
|+.++|.+|+|||+|+..+...
T Consensus 3 kI~lvG~~n~GKSTL~n~L~g~ 24 (256)
T 3iby_A 3 HALLIGNPNCGKTTLFNALTNA 24 (256)
T ss_dssp EEEEEESTTSSHHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHHCC
Confidence 7899999999999999888643
No 487
>4dhe_A Probable GTP-binding protein ENGB; melioidosis, RAS-like GTPase, cell division, cell cycle, SEP GTP-binding; 2.20A {Burkholderia thailandensis}
Probab=68.18 E-value=1.3 Score=38.96 Aligned_cols=24 Identities=13% Similarity=0.249 Sum_probs=20.5
Q ss_pred CceeeeecCCCCChhhhHHHHHHH
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
--|+.++|.+|+|||+|+..+..+
T Consensus 29 ~~~i~v~G~~~~GKSslin~l~~~ 52 (223)
T 4dhe_A 29 QPEIAFAGRSNAGKSTAINVLCNQ 52 (223)
T ss_dssp SCEEEEEESCHHHHHHHHHHHTTC
T ss_pred CCEEEEEcCCCCCHHHHHHHHhCC
Confidence 357999999999999999887654
No 488
>1nij_A Hypothetical protein YJIA; structural genomics, P-loop protein, GTP binding, structure function project, S2F, unknown function; 2.00A {Escherichia coli} SCOP: c.37.1.10 d.237.1.1
Probab=67.84 E-value=2.3 Score=40.64 Aligned_cols=22 Identities=14% Similarity=0.087 Sum_probs=19.2
Q ss_pred eeeeecCCCCChhhhHHHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~~~ 183 (400)
-+.|.|..|+|||||+..|...
T Consensus 6 v~~i~G~~GaGKTTll~~l~~~ 27 (318)
T 1nij_A 6 VTLLTGFLGAGKTTLLRHILNE 27 (318)
T ss_dssp EEEEEESSSSSCHHHHHHHHHS
T ss_pred EEEEEecCCCCHHHHHHHHHhh
Confidence 4688999999999999998865
No 489
>3nbx_X ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structure, rossman fold, hydro; HET: ADP; 2.91A {Escherichia coli}
Probab=67.81 E-value=1.9 Score=44.28 Aligned_cols=28 Identities=18% Similarity=0.269 Sum_probs=23.2
Q ss_pred eccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 157 IARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 157 igkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+..|.-+++.|++|+|||+|+..|++..
T Consensus 38 l~~~~~VLL~GpPGtGKT~LAraLa~~l 65 (500)
T 3nbx_X 38 ALSGESVFLLGPPGIAKSLIARRLKFAF 65 (500)
T ss_dssp HHHTCEEEEECCSSSSHHHHHHHGGGGB
T ss_pred HhcCCeeEeecCchHHHHHHHHHHHHHH
Confidence 3456789999999999999998887654
No 490
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}
Probab=67.78 E-value=3 Score=38.18 Aligned_cols=27 Identities=22% Similarity=0.303 Sum_probs=20.3
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHHh
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
-+|.-+-|-|++|+||||++..++..-
T Consensus 23 ~~g~~I~~eG~~GsGKsT~~~~l~~~l 49 (227)
T 3v9p_A 23 ARGKFITFEGIDGAGKTTHLQWFCDRL 49 (227)
T ss_dssp CCCCEEEEECCC---CHHHHHHHHHHH
T ss_pred cCCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 478889999999999999998887654
No 491
>2o8b_B DNA mismatch repair protein MSH6; DNA damage response, somatic hypermutat protein-DNA complex, DNA mispair, cancer; HET: DNA ADP; 2.75A {Homo sapiens} PDB: 2o8c_B* 2o8d_B* 2o8e_B* 2o8f_B*
Probab=67.75 E-value=3.1 Score=46.56 Aligned_cols=30 Identities=7% Similarity=-0.024 Sum_probs=24.5
Q ss_pred eeeeeecc-------CceeeeecCCCCChhhhHHHHH
Q 015796 152 DVMNSIAR-------GQKIPLFSAAGLPHNEIAAQIC 181 (400)
Q Consensus 152 D~l~pigk-------Gqr~~I~g~~G~GKt~L~~~i~ 181 (400)
|.-+.+.+ |+.++|.|+.|+|||||+.+++
T Consensus 774 di~l~~~~~~~~~~~g~i~~ItGpNgsGKSTlLr~iG 810 (1022)
T 2o8b_B 774 DILIGCEEEEQENGKAYCVLVTGPNMGGKSTLMRQAG 810 (1022)
T ss_dssp EEEESCCCSCC---CCCEEEEECCTTSSHHHHHHHHH
T ss_pred eeeeccccccccCCCCcEEEEECCCCCChHHHHHHHH
Confidence 44455555 8999999999999999998873
No 492
>1p5z_B DCK, deoxycytidine kinase; nucleoside kinase, P-loop, ARAC, cytarabine, transferase; HET: AR3 ADP; 1.60A {Homo sapiens} SCOP: c.37.1.1 PDB: 1p60_A* 1p61_B* 1p62_B* 2a7q_A* 2qrn_A* 2qro_A* 3exk_A* 3hp1_A* 2no7_A* 2no1_A* 2no6_A* 2no0_A* 2no9_A* 2noa_A* 2zi5_A* 2zi4_A* 2zi6_A* 2zi7_B* 2zia_A* 3kfx_A* ...
Probab=67.69 E-value=1.5 Score=40.46 Aligned_cols=26 Identities=12% Similarity=0.079 Sum_probs=21.2
Q ss_pred ccCceeeeecCCCCChhhhHHHHHHH
Q 015796 158 ARGQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 158 gkGqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
.++..+.|.|..|+||||++..|++.
T Consensus 22 ~~~~~I~ieG~~GsGKST~~~~L~~~ 47 (263)
T 1p5z_B 22 TRIKKISIEGNIAAGKSTFVNILKQL 47 (263)
T ss_dssp -CCEEEEEECSTTSSHHHHHTTTGGG
T ss_pred cCceEEEEECCCCCCHHHHHHHHHHh
Confidence 45677899999999999998887644
No 493
>1g41_A Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dependent proteolysis, chaperone; HET: ADP; 2.30A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1g3i_A* 1im2_A* 1kyi_A* 1g4a_E* 1g4b_E 1yyf_A* 1do0_A* 1do2_A* 1e94_E* 1hqy_E* 1ht1_E* 1ht2_E*
Probab=67.53 E-value=3 Score=42.26 Aligned_cols=25 Identities=24% Similarity=0.469 Sum_probs=22.0
Q ss_pred ceeeeecCCCCChhhhHHHHHHHhc
Q 015796 161 QKIPLFSAAGLPHNEIAAQICRQAG 185 (400)
Q Consensus 161 qr~~I~g~~G~GKt~L~~~i~~~~~ 185 (400)
..++++|++|+|||+++..+++..+
T Consensus 51 ~~iLl~GppGtGKT~lar~lA~~l~ 75 (444)
T 1g41_A 51 KNILMIGPTGVGKTEIARRLAKLAN 75 (444)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHTT
T ss_pred ceEEEEcCCCCCHHHHHHHHHHHcC
Confidence 4599999999999999999988765
No 494
>1wf3_A GTP-binding protein; GTPase, riken structural genomics/prote initiative, RSGI, structural genomics, hydrolase; HET: GNP; 1.88A {Thermus thermophilus} SCOP: c.37.1.8 d.52.3.1
Probab=67.37 E-value=2.5 Score=40.17 Aligned_cols=24 Identities=0% Similarity=0.079 Sum_probs=20.5
Q ss_pred CceeeeecCCCCChhhhHHHHHHH
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQ 183 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~ 183 (400)
-.++.|+|.+|+|||||+..+..+
T Consensus 7 ~g~V~ivG~~nvGKSTLln~l~g~ 30 (301)
T 1wf3_A 7 SGFVAIVGKPNVGKSTLLNNLLGV 30 (301)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHTS
T ss_pred CCEEEEECCCCCCHHHHHHHHhCC
Confidence 346999999999999999888654
No 495
>4djt_A GTP-binding nuclear protein GSP1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, RAN family; HET: GDP; 1.80A {Encephalitozoon cuniculi}
Probab=67.26 E-value=2.4 Score=37.17 Aligned_cols=20 Identities=20% Similarity=0.315 Sum_probs=17.7
Q ss_pred eeeeecCCCCChhhhHHHHH
Q 015796 162 KIPLFSAAGLPHNEIAAQIC 181 (400)
Q Consensus 162 r~~I~g~~G~GKt~L~~~i~ 181 (400)
|+.++|.+|+|||+|+..+.
T Consensus 13 ki~vvG~~~~GKSsli~~l~ 32 (218)
T 4djt_A 13 KICLIGDGGVGKTTYINRVL 32 (218)
T ss_dssp EEEEECCTTSSHHHHHCBCT
T ss_pred EEEEECCCCCCHHHHHHHHh
Confidence 68999999999999987664
No 496
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=66.86 E-value=3.6 Score=37.13 Aligned_cols=26 Identities=12% Similarity=0.121 Sum_probs=22.2
Q ss_pred cCceeeeecCCCCChhhhHHHHHHHh
Q 015796 159 RGQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 159 kGqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
+|.-+.|-|++|+||||++..++..-
T Consensus 5 ~g~~i~~eG~~gsGKsT~~~~l~~~l 30 (213)
T 4edh_A 5 TGLFVTLEGPEGAGKSTNRDYLAERL 30 (213)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CceEEEEEcCCCCCHHHHHHHHHHHH
Confidence 57778899999999999999887653
No 497
>2ygr_A Uvrabc system protein A; hydrolase, nucleotide excision repair; 3.40A {Mycobacterium tuberculosis} PDB: 3zqj_A
Probab=66.84 E-value=2.2 Score=47.55 Aligned_cols=27 Identities=15% Similarity=0.149 Sum_probs=24.2
Q ss_pred eeeeccCceeeeecCCCCChhhhHHHH
Q 015796 154 MNSIARGQKIPLFSAAGLPHNEIAAQI 180 (400)
Q Consensus 154 l~pigkGqr~~I~g~~G~GKt~L~~~i 180 (400)
=+.+-+|+.++|.|.+|+|||||+..|
T Consensus 662 sl~I~~GeivaI~G~nGSGKSTLl~~i 688 (993)
T 2ygr_A 662 DVSFPLGVLTSVTGVSGSGKSTLVNDI 688 (993)
T ss_dssp EEEEESSSEEEEECSTTSSHHHHHTTT
T ss_pred eEEECCCCEEEEEcCCCCCHHHHHHHH
Confidence 367889999999999999999999775
No 498
>2olr_A Phosphoenolpyruvate carboxykinase; carbon dioxide, lyase; HET: ATP; 1.60A {Escherichia coli K12} SCOP: c.91.1.1 c.109.1.1 PDB: 1k3c_A* 1k3d_A* 1aq2_A* 2olq_A* 1os1_A* 2pxz_X* 1ayl_A* 2py7_X* 1oen_A 1ylh_A* 1ygg_A*
Probab=66.67 E-value=4 Score=42.32 Aligned_cols=32 Identities=16% Similarity=0.452 Sum_probs=23.6
Q ss_pred ceeeeeeeeeec-cCceeeeecCCCCChhhhHH
Q 015796 147 GISTIDVMNSIA-RGQKIPLFSAAGLPHNEIAA 178 (400)
Q Consensus 147 GiraID~l~pig-kGqr~~I~g~~G~GKt~L~~ 178 (400)
|+-.+.+...++ .|....+||.+|+|||||..
T Consensus 227 G~L~mH~sanvg~~g~~~lffGlSGtGKTTLs~ 259 (540)
T 2olr_A 227 GIASMHCSANVGEKGDVAVFFGLSGTGKTTLST 259 (540)
T ss_dssp TCEEECEEEEECTTSCEEEEECSTTSSHHHHHC
T ss_pred CcEeecceeeeCCCCCEEEEEccCCCCHHHHhc
Confidence 455555444455 56678999999999999874
No 499
>1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome segregation, cell adhesion, kleisin, MIT cell cycle; HET: ATG; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.12
Probab=66.40 E-value=3.6 Score=40.86 Aligned_cols=26 Identities=8% Similarity=0.146 Sum_probs=22.4
Q ss_pred eccCceeeeecCCCCChhhhHHHHHH
Q 015796 157 IARGQKIPLFSAAGLPHNEIAAQICR 182 (400)
Q Consensus 157 igkGqr~~I~g~~G~GKt~L~~~i~~ 182 (400)
+..|+-.+|.|+.|+|||+|+..|..
T Consensus 23 ~~~~~~~~i~G~nG~GKstll~ai~~ 48 (430)
T 1w1w_A 23 FGESNFTSIIGPNGSGKSNMMDAISF 48 (430)
T ss_dssp CTTCSEEEEECSTTSSHHHHHHHHHH
T ss_pred ecCCCEEEEECCCCCCHHHHHHHHHh
Confidence 45688899999999999999988754
No 500
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=65.80 E-value=19 Score=36.10 Aligned_cols=25 Identities=4% Similarity=0.024 Sum_probs=20.4
Q ss_pred CceeeeecCCCCChhhhHHHHHHHh
Q 015796 160 GQKIPLFSAAGLPHNEIAAQICRQA 184 (400)
Q Consensus 160 Gqr~~I~g~~G~GKt~L~~~i~~~~ 184 (400)
...+.+.|..|+||||++..++...
T Consensus 100 ~~vI~ivG~~GvGKTT~a~~LA~~l 124 (433)
T 2xxa_A 100 PAVVLMAGLQGAGKTTSVGKLGKFL 124 (433)
T ss_dssp SEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHH
Confidence 3567888999999999988887654
Done!