BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015797
(400 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 263 bits (672), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 135/314 (42%), Positives = 198/314 (63%), Gaps = 8/314 (2%)
Query: 28 FSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKA-EMEFAVEVE 86
FSL+EL A++NF+ N LG GGFG VY G+L DG+ +AVKRLK + E++F EVE
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 87 ILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIG 146
+++ H+NLL LRG+C ERL+VY YM N + L+W +R IA+G
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 147
Query: 147 SAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTL 206
SA G+ YLH H P IIHRD+KA+N+LLD +F+A V DFG AKL+ HV V+GT+
Sbjct: 148 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTI 207
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIE--KVNSAIKRTITDWALPLACER 264
G++APEY GK+SE DV+ +G++LLEL +G++ + ++ + + DW L E+
Sbjct: 208 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 267
Query: 265 KFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLLKGES-KEKLTELE 323
K L D L GN+ +EE+++++ VAL C S P +RP M EV+ +L+G+ E+ E +
Sbjct: 268 KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERWEEWQ 327
Query: 324 NDELFKSHQVADYN 337
+E+F+ D+N
Sbjct: 328 KEEMFRQ----DFN 337
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/307 (42%), Positives = 192/307 (62%), Gaps = 4/307 (1%)
Query: 28 FSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKV-WSNKAEMEFAVEVE 86
FSL+EL A++NF N LG GGFG VY G+L DG +AVKRLK + E++F EVE
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 87 ILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIG 146
+++ H+NLL LRG+C ERL+VY YM N + L+W +R IA+G
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 147 SAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTL 206
SA G+ YLH H P IIHRD+KA+N+LLD +F+A V DFG AKL+ HV V+G +
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXI 199
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIE--KVNSAIKRTITDWALPLACER 264
G++APEY GK+SE DV+ +G++LLEL +G++ + ++ + + DW L E+
Sbjct: 200 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 259
Query: 265 KFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLLKGES-KEKLTELE 323
K L D L GN+ +EE+++++ VAL C S P +RP M EV+ +L+G+ E+ E +
Sbjct: 260 KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERWEEWQ 319
Query: 324 NDELFKS 330
+E+F+
Sbjct: 320 KEEMFRQ 326
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 181 bits (459), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 162/286 (56%), Gaps = 5/286 (1%)
Query: 24 TWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAV 83
++R+ L +L ATNNF++ +G G FG VY G L DG+++A+KR S++ EF
Sbjct: 26 SYRV-PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFET 84
Query: 84 EVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
E+E L+ RH +L+SL G+C E E +++Y YM N ++W +R++I
Sbjct: 85 EIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPD-GATHVTTRV 202
IG+A G+ YLH A IIHRD+K+ N+LLD +F ++ DFG +K + G TH+ V
Sbjct: 145 CIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVV 201
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLAC 262
KGTLGY+ PEY + G+ +E DVYSFG++L E+ + I + + +WA+
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN 261
Query: 263 ERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
+ ++ DP L E L++ A+ C E RP+M +VL
Sbjct: 262 NGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 178 bits (451), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 161/286 (56%), Gaps = 5/286 (1%)
Query: 24 TWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAV 83
++R+ L +L ATNNF++ +G G FG VY G L DG+++A+KR S++ EF
Sbjct: 26 SYRV-PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFET 84
Query: 84 EVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
E+E L+ RH +L+SL G+C E E +++Y YM N ++W +R++I
Sbjct: 85 EIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPD-GATHVTTRV 202
IG+A G+ YLH A IIHRD+K+ N+LLD +F ++ DFG +K + TH+ V
Sbjct: 145 CIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVV 201
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLAC 262
KGTLGY+ PEY + G+ +E DVYSFG++L E+ + I + + +WA+
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN 261
Query: 263 ERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
+ ++ DP L E L++ A+ C E RP+M +VL
Sbjct: 262 NGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 157 bits (397), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 170/304 (55%), Gaps = 29/304 (9%)
Query: 25 WRIFSLKELHSATNNFNY------DNKLGEGGFGSVYWGQLWDGSQIAVKRLK----VWS 74
+ FS EL + TNNF+ NK+GEGGFG VY G + + + +AVK+L + +
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITT 70
Query: 75 NKAEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECL 134
+ + +F E++++A+ +H+NL+ L G+ ++G + +VY YMPN CL
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPN------GSLLDRLSCL 124
Query: 135 -----LNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAK 189
L+W+ R IA G+A GI +LH + H IHRDIK++N+LLD F A+++DFG A+
Sbjct: 125 DGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLAR 181
Query: 190 LIPDGA-THVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSA 248
A T + +R+ GT Y+APE A+ G+ + D+YSFG++LLE+ +G +++ +
Sbjct: 182 ASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE-HRE 239
Query: 249 IKRTITDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
+ + E+ + D ++N + ++ + VA C H K KRP + +V
Sbjct: 240 PQLLLDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQ 298
Query: 309 DLLK 312
LL+
Sbjct: 299 QLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 169/304 (55%), Gaps = 29/304 (9%)
Query: 25 WRIFSLKELHSATNNFNY------DNKLGEGGFGSVYWGQLWDGSQIAVKRLK----VWS 74
+ FS EL + TNNF+ NK+GEGGFG VY G + + + +AVK+L + +
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITT 70
Query: 75 NKAEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECL 134
+ + +F E++++A+ +H+NL+ L G+ ++G + +VY YMPN CL
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPN------GSLLDRLSCL 124
Query: 135 -----LNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAK 189
L+W+ R IA G+A GI +LH + H IHRDIK++N+LLD F A+++DFG A+
Sbjct: 125 DGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLAR 181
Query: 190 LIPDGA-THVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSA 248
A T + R+ GT Y+APE A+ G+ + D+YSFG++LLE+ +G +++ +
Sbjct: 182 ASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE-HRE 239
Query: 249 IKRTITDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
+ + E+ + D ++N + ++ + VA C H K KRP + +V
Sbjct: 240 PQLLLDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQ 298
Query: 309 DLLK 312
LL+
Sbjct: 299 QLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 168/304 (55%), Gaps = 29/304 (9%)
Query: 25 WRIFSLKELHSATNNFNY------DNKLGEGGFGSVYWGQLWDGSQIAVKRLK----VWS 74
+ FS EL + TNNF+ NK+GEGGFG VY G + + + +AVK+L + +
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITT 64
Query: 75 NKAEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECL 134
+ + +F E++++A+ +H+NL+ L G+ ++G + +VY YMPN CL
Sbjct: 65 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPN------GSLLDRLSCL 118
Query: 135 -----LNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAK 189
L+W+ R IA G+A GI +LH + H IHRDIK++N+LLD F A+++DFG A+
Sbjct: 119 DGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLAR 175
Query: 190 LIPDGATHVT-TRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSA 248
A V R+ GT Y+APE A+ G+ + D+YSFG++LLE+ +G +++ +
Sbjct: 176 ASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE-HRE 233
Query: 249 IKRTITDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
+ + E+ + D ++N + ++ + VA C H K KRP + +V
Sbjct: 234 PQLLLDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQ 292
Query: 309 DLLK 312
LL+
Sbjct: 293 QLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 163/304 (53%), Gaps = 29/304 (9%)
Query: 25 WRIFSLKELHSATNNFNY------DNKLGEGGFGSVYWGQLWDGSQIAVKRLK----VWS 74
+ FS EL + TNNF+ NK GEGGFG VY G + + + +AVK+L + +
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITT 61
Query: 75 NKAEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECL 134
+ + +F E+++ A+ +H+NL+ L G+ ++G + +VY Y PN CL
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL------SCL 115
Query: 135 -----LNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAK 189
L+W+ R IA G+A GI +LH + H IHRDIK++N+LLD F A+++DFG A+
Sbjct: 116 DGTPPLSWHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLAR 172
Query: 190 LIPDGATHV-TTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSA 248
A V +R+ GT Y APE A+ G+ + D+YSFG++LLE+ +G +++ +
Sbjct: 173 ASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE-HRE 230
Query: 249 IKRTITDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
+ + E+ + D + N + ++ VA C H K KRP + +V
Sbjct: 231 PQLLLDIKEEIEDEEKTIEDYIDKKXN-DADSTSVEAXYSVASQCLHEKKNKRPDIKKVQ 289
Query: 309 DLLK 312
LL+
Sbjct: 290 QLLQ 293
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 145/277 (52%), Gaps = 23/277 (8%)
Query: 39 NFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEM--EFAVEVEILARVRHKNL 96
+ N K+G G FG+V+ + W GS +AVK L AE EF EV I+ R+RH N+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAE-WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 97 LSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+ G + IV +Y+ E L+ RR+ +A A+G+ YLH+
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGARE-QLDERRRLSMAYDVAKGMNYLHN 155
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTR-VKGTLGYLAPEYAM 215
P I+HR++K+ N+L+D + +V DFG ++L +T ++++ GT ++APE
Sbjct: 156 R-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLR 212
Query: 216 LGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLN 275
++E DVYSFG++L ELA+ ++P +N A + + A+ C+R L PR N
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQPWGNLNPA--QVVA--AVGFKCKR----LEIPR-N 263
Query: 276 GNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLLK 312
N +V + C ++P KRP+ ++DLL+
Sbjct: 264 LN------PQVAAIIEGCWTNEPWKRPSFATIMDLLR 294
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 147/292 (50%), Gaps = 23/292 (7%)
Query: 39 NFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEM--EFAVEVEILARVRHKNL 96
+ N K+G G FG+V+ + W GS +AVK L AE EF EV I+ R+RH N+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAE-WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 97 LSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+ G + IV +Y+ E L+ RR+ +A A+G+ YLH+
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGARE-QLDERRRLSMAYDVAKGMNYLHN 155
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTR-VKGTLGYLAPEYAM 215
P I+HRD+K+ N+L+D + +V DFG ++L + + ++ GT ++APE
Sbjct: 156 R-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLR 212
Query: 216 LGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLN 275
++E DVYSFG++L ELA+ ++P +N A + + A+ C+R L PR N
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQPWGNLNPA--QVVA--AVGFKCKR----LEIPR-N 263
Query: 276 GNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLLKGESKEKLTELENDEL 327
N +V + C ++P KRP+ ++DLL+ K + +L
Sbjct: 264 LN------PQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPNRSDL 309
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 126/262 (48%), Gaps = 26/262 (9%)
Query: 45 KLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
KLG+G FG V+ G W+G+ ++A+K LK + E F E +++ ++RH+ L+ L
Sbjct: 15 KLGQGCFGEVWMGT-WNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVV 72
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
+E + IV +YM L + +D+A A G+ Y+ + +
Sbjct: 73 SE-EPIXIVTEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 126
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ + +VADFG A+LI D K + + APE A+ G+ +
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 186
Query: 224 DVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEE 282
DV+SFGILL EL + G+ P + + R + D ER + P + +
Sbjct: 187 DVWSFGILLTELTTKGRVPYPGM---VNREVLD-----QVERGYRMPCPPECPESLHD-- 236
Query: 283 LKRVVLVALTCAHSKPEKRPTM 304
+ C +PE+RPT
Sbjct: 237 ------LMCQCWRKEPEERPTF 252
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 127/262 (48%), Gaps = 26/262 (9%)
Query: 45 KLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
KLG+G FG V+ G W+G+ ++A+K LK + E F E +++ ++RH+ L+ L
Sbjct: 274 KLGQGCFGEVWMGT-WNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVV 331
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
+E + IV +YM L + +D+A A G+ Y+ + +
Sbjct: 332 SE-EPIYIVTEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 385
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ + +VADFG A+LI D K + + APE A+ G+ +
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 445
Query: 224 DVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEE 282
DV+SFGILL EL + G+ P + + R + D ER + P E
Sbjct: 446 DVWSFGILLTELTTKGRVPYPGM---VNREVLD-----QVERGYRMPCPPE-----CPES 492
Query: 283 LKRVVLVALTCAHSKPEKRPTM 304
L ++ C +PE+RPT
Sbjct: 493 LHDLM---CQCWRKEPEERPTF 511
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 127/262 (48%), Gaps = 26/262 (9%)
Query: 45 KLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
KLG+G FG V+ G W+G+ ++A+K LK + E F E +++ ++RH+ L+ L
Sbjct: 191 KLGQGCFGEVWMGT-WNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVV 248
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
+E + IV +YM L + +D+A A G+ Y+ + +
Sbjct: 249 SE-EPIYIVTEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 302
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ + +VADFG A+LI D K + + APE A+ G+ +
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 224 DVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEE 282
DV+SFGILL EL + G+ P + + R + D ER + P E
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGM---VNREVLD-----QVERGYRMPCPPE-----CPES 409
Query: 283 LKRVVLVALTCAHSKPEKRPTM 304
L ++ C +PE+RPT
Sbjct: 410 LHDLM---CQCWRKEPEERPTF 428
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 127/262 (48%), Gaps = 26/262 (9%)
Query: 45 KLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
KLG+G FG V+ G W+G+ ++A+K LK + E F E +++ ++RH+ L+ L
Sbjct: 191 KLGQGCFGEVWMGT-WNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVV 248
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
+E + IV +YM L + +D+A A G+ Y+ + +
Sbjct: 249 SE-EPIYIVTEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 302
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ + +VADFG A+LI D K + + APE A+ G+ +
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 224 DVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEE 282
DV+SFGILL EL + G+ P + + R + D ER + P E
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGM---VNREVLD-----QVERGYRMPCPPE-----CPES 409
Query: 283 LKRVVLVALTCAHSKPEKRPTM 304
L ++ C +PE+RPT
Sbjct: 410 LHDLM---CQCWRKEPEERPTF 428
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 126/262 (48%), Gaps = 26/262 (9%)
Query: 45 KLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
KLG+G FG V+ G W+G+ ++A+K LK + E F E +++ ++RH+ L+ L
Sbjct: 18 KLGQGCFGEVWMGT-WNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVV 75
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
+E + IV +YM L + +D+A A G+ Y+ + +
Sbjct: 76 SE-EPIYIVTEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 129
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ + +VADFG A+LI D K + + APE A+ G+ +
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 189
Query: 224 DVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEE 282
DV+SFGILL EL + G+ P + + R + D ER + P + +
Sbjct: 190 DVWSFGILLTELTTKGRVPYPGM---VNREVLD-----QVERGYRMPCPPECPESLHD-- 239
Query: 283 LKRVVLVALTCAHSKPEKRPTM 304
+ C +PE+RPT
Sbjct: 240 ------LMCQCWRKEPEERPTF 255
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 126/262 (48%), Gaps = 26/262 (9%)
Query: 45 KLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
KLG+G FG V+ G W+G+ ++A+K LK + E F E +++ ++RH+ L+ L
Sbjct: 25 KLGQGCFGEVWMGT-WNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKIRHEKLVQLYAVV 82
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
+E + IV +YM L + +D+A A G+ Y+ + +
Sbjct: 83 SE-EPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ + +VADFG A+LI D K + + APE A+ G+ +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 224 DVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEE 282
DV+SFGILL EL + G+ P + + R + D ER + P E
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGM---VNREVLD-----QVERGYRMPCPPE-----CPES 243
Query: 283 LKRVVLVALTCAHSKPEKRPTM 304
L ++ C PE+RPT
Sbjct: 244 LHDLM---CQCWRKDPEERPTF 262
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 127/262 (48%), Gaps = 26/262 (9%)
Query: 45 KLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
KLG+G FG V+ G W+G+ ++A+K LK + E F E +++ ++RH+ L+ L
Sbjct: 191 KLGQGCFGEVWMGT-WNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVV 248
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
+E + IV +YM L + +D+A A G+ Y+ + +
Sbjct: 249 SE-EPIYIVGEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 302
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ + +VADFG A+LI D K + + APE A+ G+ +
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 224 DVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEE 282
DV+SFGILL EL + G+ P + + R + D ER + P E
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGM---VNREVLD-----QVERGYRMPCPPE-----CPES 409
Query: 283 LKRVVLVALTCAHSKPEKRPTM 304
L ++ C +PE+RPT
Sbjct: 410 LHDLM---CQCWRKEPEERPTF 428
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 125/262 (47%), Gaps = 26/262 (9%)
Query: 45 KLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
KLG+G FG V+ G W+G+ ++A+K LK + E F E +++ ++RH+ L+ L
Sbjct: 25 KLGQGCFGEVWMGT-WNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
+E + IV +YM L + +D+A A G+ Y+ + +
Sbjct: 83 SE-EPIYIVIEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ + +VADFG A+LI D K + + APE A+ G+ +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 224 DVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEE 282
DV+SFGILL EL + G+ P + + R + D ER + P + +
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGM---VNREVLD-----QVERGYRMPCPPECPESLHD-- 246
Query: 283 LKRVVLVALTCAHSKPEKRPTM 304
+ C PE+RPT
Sbjct: 247 ------LMCQCWRKDPEERPTF 262
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 126/262 (48%), Gaps = 26/262 (9%)
Query: 45 KLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
KLG+G FG V+ G W+G+ ++A+K LK + E F E +++ ++RH+ L+ L
Sbjct: 25 KLGQGCFGEVWMGT-WNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
+E + IV +YM L + +D+A A G+ Y+ + +
Sbjct: 83 SE-EPIYIVIEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ + +VADFG A+LI D K + + APE A+ G+ +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 224 DVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEE 282
DV+SFGILL EL + G+ P + + R + D ER + P E
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGM---VNREVLD-----QVERGYRMPCPPE-----CPES 243
Query: 283 LKRVVLVALTCAHSKPEKRPTM 304
L ++ C PE+RPT
Sbjct: 244 LHDLM---CQCWRKDPEERPTF 262
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 125/262 (47%), Gaps = 26/262 (9%)
Query: 45 KLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
KLG+G FG V+ G W+G+ ++A+K LK + E F E +++ ++RH+ L+ L
Sbjct: 16 KLGQGCFGEVWMGT-WNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVV 73
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
+E + IV +YM L + +D+A A G+ Y+ + +
Sbjct: 74 SE-EPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 127
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ + +VADFG A+LI D K + + APE A+ G+ +
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 224 DVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEE 282
DV+SFGILL EL + G+ P + + R + D ER + P + +
Sbjct: 188 DVWSFGILLTELTTKGRVPYPGM---VNREVLD-----QVERGYRMPCPPECPESLHD-- 237
Query: 283 LKRVVLVALTCAHSKPEKRPTM 304
+ C PE+RPT
Sbjct: 238 ------LMCQCWRKDPEERPTF 253
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 130/273 (47%), Gaps = 48/273 (17%)
Query: 45 KLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
KLG+G FG V+ G W+G+ ++A+K LK + E F E +++ ++RH+ L+ L
Sbjct: 25 KLGQGCFGEVWMGT-WNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNW-----------NRRMDIAIGSAEGIV 152
+E + IV +YM CLL++ + +D+A A G+
Sbjct: 83 SE-EPIYIVMEYMSKG-------------CLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
Y+ + +HRD++A+N+L+ + +VADFG A+LI D K + + APE
Sbjct: 129 YVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 213 YAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSELAD 271
A+ G+ + DV+SFGILL EL + G+ P + + R + D ER +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---VNREVLD-----QVERGYRMPCP 237
Query: 272 PRLNGNFVEEELKRVVLVALTCAHSKPEKRPTM 304
P E L ++ C PE+RPT
Sbjct: 238 PE-----CPESLHDLM---CQCWRKDPEERPTF 262
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 126/262 (48%), Gaps = 26/262 (9%)
Query: 45 KLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
KLG+G FG V+ G W+G+ ++A+K LK + E F E +++ ++RH+ L+ L
Sbjct: 25 KLGQGCFGEVWMGT-WNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
+E + IV +YM L + +D+A A G+ Y+ + +
Sbjct: 83 SE-EPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ + +VADFG A+LI D K + + APE A+ G+ +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 224 DVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEE 282
DV+SFGILL EL + G+ P + + R + D ER + P E
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGM---VNREVLD-----QVERGYRMPCPPE-----CPES 243
Query: 283 LKRVVLVALTCAHSKPEKRPTM 304
L ++ C PE+RPT
Sbjct: 244 LHDLM---CQCWRKDPEERPTF 262
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 125/262 (47%), Gaps = 26/262 (9%)
Query: 45 KLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
KLG+G FG V+ G W+G+ ++A+K LK + E F E +++ ++RH+ L+ L
Sbjct: 14 KLGQGCFGEVWMGT-WNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVV 71
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
+E + IV +YM L + +D+A A G+ Y+ + +
Sbjct: 72 SE-EPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 125
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ + +VADFG A+LI D K + + APE A+ G+ +
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 185
Query: 224 DVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEE 282
DV+SFGILL EL + G+ P + + R + D ER + P + +
Sbjct: 186 DVWSFGILLTELTTKGRVPYPGM---VNREVLD-----QVERGYRMPCPPECPESLHD-- 235
Query: 283 LKRVVLVALTCAHSKPEKRPTM 304
+ C PE+RPT
Sbjct: 236 ------LMCQCWRKDPEERPTF 251
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 126/262 (48%), Gaps = 26/262 (9%)
Query: 45 KLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
KLG+G FG V+ G W+G+ ++A+K LK + E F E +++ ++RH+ L+ L
Sbjct: 25 KLGQGCFGEVWMGT-WNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
+E + IV +YM L + +D+A A G+ Y+ + +
Sbjct: 83 SE-EPIYIVCEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ + +VADFG A+LI D K + + APE A+ G+ +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 224 DVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEE 282
DV+SFGILL EL + G+ P + + R + D ER + P E
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGM---VNREVLD-----QVERGYRMPCPPE-----CPES 243
Query: 283 LKRVVLVALTCAHSKPEKRPTM 304
L ++ C PE+RPT
Sbjct: 244 LHDLM---CQCWRKDPEERPTF 262
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 125/278 (44%), Gaps = 48/278 (17%)
Query: 44 NKLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGY 102
+LG G FG V G+ W G +AVK +K + +E EF E + + ++ H L+ G
Sbjct: 14 KELGSGQFGVVKLGK-WKGQYDVAVKMIKE-GSMSEDEFFQEAQTMMKLSHPKLVKFYGV 71
Query: 103 CAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRR----------MDIAIGSAEGIV 152
C++ IV +Y+ N CLLN+ R +++ EG+
Sbjct: 72 CSKEYPIYIVTEYISNG-------------CLLNYLRSHGKGLEPSQLLEMCYDVCEGMA 118
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
+L H IHRD+ A N L+D D +V+DFG + + D + K + + APE
Sbjct: 119 FLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPE 175
Query: 213 YAMLGKASESCDVYSFGILLLELAS-GKKPIE-KVNSAIKRTITDWALPLACERKFSELA 270
K S DV++FGIL+ E+ S GK P + NS + ++ + L
Sbjct: 176 VFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVS----------QGHRLY 225
Query: 271 DPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
P L + + + + +C H PEKRPT ++L
Sbjct: 226 RPHLASDTIYQ-------IMYSCWHELPEKRPTFQQLL 256
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 130/273 (47%), Gaps = 48/273 (17%)
Query: 45 KLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
KLG+G FG V+ G W+G+ ++A+K LK + E F E +++ ++RH+ L+ L
Sbjct: 25 KLGQGCFGEVWMGT-WNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNW-----------NRRMDIAIGSAEGIV 152
+E + IV +YM CLL++ + +D+A A G+
Sbjct: 83 SE-EPIYIVTEYMSKG-------------CLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
Y+ + +HRD++A+N+L+ + +VADFG A+LI D K + + APE
Sbjct: 129 YVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 213 YAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSELAD 271
A+ G+ + DV+SFGILL EL + G+ P + + R + D ER +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---VNREVLD-----QVERGYRMPCP 237
Query: 272 PRLNGNFVEEELKRVVLVALTCAHSKPEKRPTM 304
P E L ++ C PE+RPT
Sbjct: 238 PE-----CPESLHDLM---CQCWRKDPEERPTF 262
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 125/262 (47%), Gaps = 26/262 (9%)
Query: 45 KLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
KLG+G FG V+ G W+G+ ++A+K LK N + F E +++ ++RH+ L+ L
Sbjct: 192 KLGQGCFGEVWMGT-WNGTTRVAIKTLKP-GNMSPEAFLQEAQVMKKLRHEKLVQLYAVV 249
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
+E + IV +YM L + +D+A A G+ Y+ + +
Sbjct: 250 SE-EPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 303
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ + +VADFG +LI D K + + APE A+ G+ +
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 363
Query: 224 DVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEE 282
DV+SFGILL EL + G+ P + + R + D ER + P E
Sbjct: 364 DVWSFGILLTELTTKGRVPYPGM---VNREVLD-----QVERGYRMPCPPE-----CPES 410
Query: 283 LKRVVLVALTCAHSKPEKRPTM 304
L ++ C PE+RPT
Sbjct: 411 LHDLM---CQCWRKDPEERPTF 429
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 127/262 (48%), Gaps = 26/262 (9%)
Query: 45 KLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
KLG+G FG V+ G W+G+ ++A+K LK + E F E +++ ++RH+ L+ L
Sbjct: 22 KLGQGCFGEVWMGT-WNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
+E + IV +YM L + +D++ A G+ Y+ + +
Sbjct: 80 SE-EPIYIVTEYMNKGSLLDFLKGETGK--YLRLPQLVDMSAQIASGMAYVERM---NYV 133
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ + +VADFG A+LI D K + + APE A+ G+ +
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 224 DVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEE 282
DV+SFGILL EL + G+ P + + R + D ER + P E
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGM---VNREVLD-----QVERGYRMPCPPE-----CPES 240
Query: 283 LKRVVLVALTCAHSKPEKRPTM 304
L ++ C +PE+RPT
Sbjct: 241 LHDLM---CQCWRKEPEERPTF 259
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 126/262 (48%), Gaps = 26/262 (9%)
Query: 45 KLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
KLG+G FG V+ G W+G+ ++A+K LK + E F E +++ ++RH+ L+ L
Sbjct: 22 KLGQGCFGEVWMGT-WNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
+E + IV +YM L + +D++ A G+ Y+ + +
Sbjct: 80 SE-EPIYIVTEYMNKGSLLDFLKGETGK--YLRLPQLVDMSAQIASGMAYVERM---NYV 133
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ + +VADFG A+LI D K + + APE A+ G+ +
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 224 DVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEE 282
DV+SFGILL EL + G+ P + + R + D ER + P + +
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGM---VNREVLD-----QVERGYRMPCPPECPESLHD-- 243
Query: 283 LKRVVLVALTCAHSKPEKRPTM 304
+ C +PE+RPT
Sbjct: 244 ------LMCQCWRKEPEERPTF 259
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 125/262 (47%), Gaps = 26/262 (9%)
Query: 45 KLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
KLG+G FG V+ G W+G+ ++A+K LK + E F E +++ ++RH+ L+ L
Sbjct: 25 KLGQGCFGEVWMGT-WNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
+E + IV +YM L + +D+A A G+ Y+ + +
Sbjct: 83 SE-EPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD+ A+N+L+ + +VADFG A+LI D K + + APE A+ G+ +
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 224 DVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEE 282
DV+SFGILL EL + G+ P + + R + D ER + P E
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGM---VNREVLD-----QVERGYRMPCPPE-----CPES 243
Query: 283 LKRVVLVALTCAHSKPEKRPTM 304
L ++ C PE+RPT
Sbjct: 244 LHDLM---CQCWRKDPEERPTF 262
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 15/210 (7%)
Query: 44 NKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEM--EFAVEVEILARVRHKNLLSLRG 101
++G G FG+VY G+ W G +AVK L V + + F EV +L + RH N+L G
Sbjct: 41 QRIGSGSFGTVYKGK-WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
Y + Q ++ + E + + +DIA +A+G+ YLH +
Sbjct: 99 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAKS--- 151
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPD-GATHVTTRVKGTLGYLAPEYAML---G 217
IIHRD+K++N+ L D ++ DFG A + +H ++ G++ ++APE +
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 211
Query: 218 KASESCDVYSFGILLLELASGKKPIEKVNS 247
S DVY+FGI+L EL +G+ P +N+
Sbjct: 212 PYSFQSDVYAFGIVLYELMTGQLPYSNINN 241
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 15/210 (7%)
Query: 44 NKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEM--EFAVEVEILARVRHKNLLSLRG 101
++G G FG+VY G+ W G +AVK L V + + F EV +L + RH N+L G
Sbjct: 42 QRIGSGSFGTVYKGK-WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
Y + Q ++ + E + + +DIA +A+G+ YLH +
Sbjct: 100 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAKS--- 152
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPD-GATHVTTRVKGTLGYLAPEYAML---G 217
IIHRD+K++N+ L D ++ DFG A + +H ++ G++ ++APE +
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 218 KASESCDVYSFGILLLELASGKKPIEKVNS 247
S DVY+FGI+L EL +G+ P +N+
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLPYSNINN 242
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 15/210 (7%)
Query: 44 NKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEM--EFAVEVEILARVRHKNLLSLRG 101
++G G FG+VY G+ W G +AVK L V + + F EV +L + RH N+L G
Sbjct: 16 QRIGSGSFGTVYKGK-WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
Y + Q ++ + E + + +DIA +A+G+ YLH +
Sbjct: 74 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAKS--- 126
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPD-GATHVTTRVKGTLGYLAPEYAML---G 217
IIHRD+K++N+ L D ++ DFG A + +H ++ G++ ++APE +
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 186
Query: 218 KASESCDVYSFGILLLELASGKKPIEKVNS 247
S DVY+FGI+L EL +G+ P +N+
Sbjct: 187 PYSFQSDVYAFGIVLYELMTGQLPYSNINN 216
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 15/210 (7%)
Query: 44 NKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEM--EFAVEVEILARVRHKNLLSLRG 101
++G G FG+VY G+ W G +AVK L V + + F EV +L + RH N+L G
Sbjct: 19 QRIGSGSFGTVYKGK-WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
Y + Q ++ + E + + +DIA +A+G+ YLH +
Sbjct: 77 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAKS--- 129
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPD-GATHVTTRVKGTLGYLAPEYAML---G 217
IIHRD+K++N+ L D ++ DFG A + +H ++ G++ ++APE +
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 218 KASESCDVYSFGILLLELASGKKPIEKVNS 247
S DVY+FGI+L EL +G+ P +N+
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLPYSNINN 219
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 15/210 (7%)
Query: 44 NKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEM--EFAVEVEILARVRHKNLLSLRG 101
++G G FG+VY G+ W G +AVK L V + + F EV +L + RH N+L G
Sbjct: 14 QRIGSGSFGTVYKGK-WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
Y + Q ++ + E + + +DIA +A+G+ YLH +
Sbjct: 72 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAKS--- 124
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPD-GATHVTTRVKGTLGYLAPEYAML---G 217
IIHRD+K++N+ L D ++ DFG A + +H ++ G++ ++APE +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 218 KASESCDVYSFGILLLELASGKKPIEKVNS 247
S DVY+FGI+L EL +G+ P +N+
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLPYSNINN 214
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 15/210 (7%)
Query: 44 NKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEM--EFAVEVEILARVRHKNLLSLRG 101
++G G FG+VY G+ W G +AVK L V + + F EV +L + RH N+L G
Sbjct: 19 QRIGSGSFGTVYKGK-WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
Y + Q ++ + E + + +DIA +A+G+ YLH +
Sbjct: 77 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAKS--- 129
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPD-GATHVTTRVKGTLGYLAPEYAML---G 217
IIHRD+K++N+ L D ++ DFG A + +H ++ G++ ++APE +
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 218 KASESCDVYSFGILLLELASGKKPIEKVNS 247
S DVY+FGI+L EL +G+ P +N+
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLPYSNINN 219
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 133/279 (47%), Gaps = 44/279 (15%)
Query: 45 KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEM--EFAVEVEILARVRHKNLLSLRGY 102
++G G FG+VY G+ W G +AVK L V + + F EV +L + RH N+L GY
Sbjct: 19 RIGSGSFGTVYKGK-WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 103 CAEGQERLI--------VYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYL 154
+ Q ++ +Y ++ E + +DIA +A G+ YL
Sbjct: 77 STKPQLAIVTQWCEGSSLYHHL------------HASETKFEMKKLIDIARQTARGMDYL 124
Query: 155 HHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPD-GATHVTTRVKGTLGYLAPEY 213
H + IIHRD+K++N+ L D ++ DFG A + +H ++ G++ ++APE
Sbjct: 125 HAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 181
Query: 214 AMLGKA---SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERKFS-EL 269
+ + S DVY+FGI+L EL +G+ P +N+ D + + S +L
Sbjct: 182 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN------RDQIIEMVGRGSLSPDL 235
Query: 270 ADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
+ R N + +KR++ C K ++RP+ +L
Sbjct: 236 SKVRSN---CPKRMKRLM---AECLKKKRDERPSFPRIL 268
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 44 NKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEM--EFAVEVEILARVRHKNLLSLRG 101
++G G FG+VY G+ W G +AVK L V + + F EV +L + RH N+L G
Sbjct: 14 QRIGSGSFGTVYKGK-WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
Y Q ++ + E + + +DIA +A+G+ YLH +
Sbjct: 72 YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAKS--- 124
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPD-GATHVTTRVKGTLGYLAPEYAML---G 217
IIHRD+K++N+ L D ++ DFG A + +H ++ G++ ++APE +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 218 KASESCDVYSFGILLLELASGKKPIEKVNS 247
S DVY+FGI+L EL +G+ P +N+
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLPYSNINN 214
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 129/289 (44%), Gaps = 58/289 (20%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVE-------ILARVRHKNLLS 98
+G GGFG VY W G ++AVK + + + + + +E + A ++H N+++
Sbjct: 15 IGIGGFGKVY-RAFWIGDEVAVKAAR---HDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 99 LRGYCAEGQERLIVYDYM-PNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
LRG C + +V ++ + L+NW A+ A G+ YLH
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDE 124
Query: 158 ATPHIIHRDIKASNVLL-----DADFK---AQVADFGFAKLIPDGATHVTTRVK--GTLG 207
A IIHRD+K+SN+L+ + D ++ DFG A+ H TT++ G
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAAGAYA 179
Query: 208 YLAPEYAMLGKASESCDVYSFGILLLELASGKKP---IEKVNSAIKRTITDWALPL--AC 262
++APE S+ DV+S+G+LL EL +G+ P I+ + A + ALP+ C
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTC 239
Query: 263 ERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
F++L + C + P RP+ +LD L
Sbjct: 240 PEPFAKLME--------------------DCWNPDPHSRPSFTNILDQL 268
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 44 NKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEM--EFAVEVEILARVRHKNLLSLRG 101
++G G FG+VY G+ W G +AVK L V + + F EV +L + RH N+L G
Sbjct: 34 QRIGSGSFGTVYKGK-WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
Y + Q ++ + E + + +DIA +A+G+ YLH +
Sbjct: 92 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAKS--- 144
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPD-GATHVTTRVKGTLGYLAPEYAML---G 217
IIHRD+K++N+ L D ++ DFG A +H ++ G++ ++APE +
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 204
Query: 218 KASESCDVYSFGILLLELASGKKPIEKVNS 247
S DVY+FGI+L EL +G+ P +N+
Sbjct: 205 PYSFQSDVYAFGIVLYELMTGQLPYSNINN 234
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 44 NKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEM--EFAVEVEILARVRHKNLLSLRG 101
++G G FG+VY G+ W G +AVK L V + + F EV +L + RH N+L G
Sbjct: 42 QRIGSGSFGTVYKGK-WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
Y + Q ++ + E + + +DIA +A+G+ YLH +
Sbjct: 100 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAKS--- 152
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPD-GATHVTTRVKGTLGYLAPEYAML---G 217
IIHRD+K++N+ L D ++ DFG A +H ++ G++ ++APE +
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 218 KASESCDVYSFGILLLELASGKKPIEKVNS 247
S DVY+FGI+L EL +G+ P +N+
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLPYSNINN 242
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 44 NKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEM--EFAVEVEILARVRHKNLLSLRG 101
++G G FG+VY G+ W G +AVK L V + + F EV +L + RH N+L G
Sbjct: 14 QRIGSGSFGTVYKGK-WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
Y + Q ++ + E + + +DIA +A+G+ YLH +
Sbjct: 72 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAKS--- 124
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPD-GATHVTTRVKGTLGYLAPEYAML---G 217
IIHRD+K++N+ L D ++ DFG A +H ++ G++ ++APE +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 218 KASESCDVYSFGILLLELASGKKPIEKVNS 247
S DVY+FGI+L EL +G+ P +N+
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLPYSNINN 214
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 134/293 (45%), Gaps = 50/293 (17%)
Query: 39 NFNYDNKLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLL 97
+ + +LG G FG V +G+ W G +A+K +K + +E EF E +++ + H+ L+
Sbjct: 9 DLTFLKELGTGQFGVVKYGK-WRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLV 66
Query: 98 SLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRM----------DIAIGS 147
L G C + + I+ +YM N CLLN+ R M ++
Sbjct: 67 QLYGVCTKQRPIFIITEYMANG-------------CLLNYLREMRHRFQTQQLLEMCKDV 113
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLG 207
E + YL + +HRD+ A N L++ +V+DFG ++ + D + K +
Sbjct: 114 CEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR 170
Query: 208 YLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKF 266
+ PE M K S D+++FG+L+ E+ S GK P E+ ++ T A L R
Sbjct: 171 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEHIAQGLRLYR-- 226
Query: 267 SELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPT----MLEVLDLLKGES 315
P L ++V + +C H K ++RPT + +LD++ ES
Sbjct: 227 -----PHLAS-------EKVYTIMYSCWHEKADERPTFKILLSNILDVMDEES 267
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 134/293 (45%), Gaps = 50/293 (17%)
Query: 39 NFNYDNKLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLL 97
+ + +LG G FG V +G+ W G +A+K +K + +E EF E +++ + H+ L+
Sbjct: 5 DLTFLKELGTGQFGVVKYGK-WRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLV 62
Query: 98 SLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRM----------DIAIGS 147
L G C + + I+ +YM N CLLN+ R M ++
Sbjct: 63 QLYGVCTKQRPIFIITEYMANG-------------CLLNYLREMRHRFQTQQLLEMCKDV 109
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLG 207
E + YL + +HRD+ A N L++ +V+DFG ++ + D + K +
Sbjct: 110 CEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR 166
Query: 208 YLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKF 266
+ PE M K S D+++FG+L+ E+ S GK P E+ ++ T A L R
Sbjct: 167 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEHIAQGLRLYR-- 222
Query: 267 SELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPT----MLEVLDLLKGES 315
P L ++V + +C H K ++RPT + +LD++ ES
Sbjct: 223 -----PHLAS-------EKVYTIMYSCWHEKADERPTFKILLSNILDVMDEES 263
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 44/280 (15%)
Query: 44 NKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEM--EFAVEVEILARVRHKNLLSLRG 101
++G G FG+VY G+ W G +AVK L V + + F EV +L + RH N+L G
Sbjct: 30 QRIGSGSFGTVYKGK-WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 102 YCAEGQERLI--------VYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
Y + Q ++ +Y ++ E + +DIA +A G+ Y
Sbjct: 88 YSTKPQLAIVTQWCEGSSLYHHL------------HASETKFEMKKLIDIARQTARGMDY 135
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPD-GATHVTTRVKGTLGYLAPE 212
LH + IIHRD+K++N+ L D ++ DFG A +H ++ G++ ++APE
Sbjct: 136 LHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 192
Query: 213 YAMLGKA---SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERKFS-E 268
+ + S DVY+FGI+L EL +G+ P +N+ D + + S +
Sbjct: 193 VIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN------RDQIIEMVGRGSLSPD 246
Query: 269 LADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
L+ R N + +KR++ C K ++RP+ +L
Sbjct: 247 LSKVRSN---CPKRMKRLM---AECLKKKRDERPSFPRIL 280
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 30/260 (11%)
Query: 34 HSATNNFNYDNKLGEGGFGSVYWGQLW------DGSQIAVKRLKVWSNKAEMEFAVEVEI 87
H +N +LGEG FG V+ + + D +AVK LK S+ A +F E E+
Sbjct: 9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAEL 68
Query: 88 LARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECL---------LNWN 138
L ++H++++ G C EG ++V++YM + L L +
Sbjct: 69 LTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQS 128
Query: 139 RRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHV 198
+ + IA A G+VYL A+ H +HRD+ N L+ + ++ DFG ++ D +
Sbjct: 129 QMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR---DVYSTD 182
Query: 199 TTRVKG----TLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV-NSAIKRT 252
RV G + ++ PE M K + DV+S G++L E+ + GK+P ++ N+ +
Sbjct: 183 YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIEC 242
Query: 253 ITDWAL---PLACERKFSEL 269
IT + P C ++ EL
Sbjct: 243 ITQGRVLQRPRTCPQEVYEL 262
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 134/293 (45%), Gaps = 50/293 (17%)
Query: 39 NFNYDNKLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLL 97
+ + +LG G FG V +G+ W G +A+K +K + +E EF E +++ + H+ L+
Sbjct: 16 DLTFLKELGTGQFGVVKYGK-WRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLV 73
Query: 98 SLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRM----------DIAIGS 147
L G C + + I+ +YM N CLLN+ R M ++
Sbjct: 74 QLYGVCTKQRPIFIITEYMANG-------------CLLNYLREMRHRFQTQQLLEMCKDV 120
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLG 207
E + YL + +HRD+ A N L++ +V+DFG ++ + D + K +
Sbjct: 121 CEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR 177
Query: 208 YLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKF 266
+ PE M K S D+++FG+L+ E+ S GK P E+ ++ T A L R
Sbjct: 178 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEHIAQGLRLYR-- 233
Query: 267 SELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPT----MLEVLDLLKGES 315
P L ++V + +C H K ++RPT + +LD++ ES
Sbjct: 234 -----PHLAS-------EKVYTIMYSCWHEKADERPTFKILLSNILDVMDEES 274
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 134/293 (45%), Gaps = 50/293 (17%)
Query: 39 NFNYDNKLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLL 97
+ + +LG G FG V +G+ W G +A+K +K + +E EF E +++ + H+ L+
Sbjct: 25 DLTFLKELGTGQFGVVKYGK-WRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLV 82
Query: 98 SLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRM----------DIAIGS 147
L G C + + I+ +YM N CLLN+ R M ++
Sbjct: 83 QLYGVCTKQRPIFIITEYMANG-------------CLLNYLREMRHRFQTQQLLEMCKDV 129
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLG 207
E + YL + +HRD+ A N L++ +V+DFG ++ + D + K +
Sbjct: 130 CEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR 186
Query: 208 YLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKF 266
+ PE M K S D+++FG+L+ E+ S GK P E+ ++ T A L R
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEHIAQGLRLYR-- 242
Query: 267 SELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPT----MLEVLDLLKGES 315
P L ++V + +C H K ++RPT + +LD++ ES
Sbjct: 243 -----PHLAS-------EKVYTIMYSCWHEKADERPTFKILLSNILDVMDEES 283
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 134/293 (45%), Gaps = 50/293 (17%)
Query: 39 NFNYDNKLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLL 97
+ + +LG G FG V +G+ W G +A+K +K + +E EF E +++ + H+ L+
Sbjct: 25 DLTFLKELGTGQFGVVKYGK-WRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLV 82
Query: 98 SLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRM----------DIAIGS 147
L G C + + I+ +YM N CLLN+ R M ++
Sbjct: 83 QLYGVCTKQRPIFIITEYMANG-------------CLLNYLREMRHRFQTQQLLEMCKDV 129
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLG 207
E + YL + +HRD+ A N L++ +V+DFG ++ + D + K +
Sbjct: 130 CEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVR 186
Query: 208 YLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKF 266
+ PE M K S D+++FG+L+ E+ S GK P E+ ++ T A L R
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEHIAQGLRLYR-- 242
Query: 267 SELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPT----MLEVLDLLKGES 315
P L ++V + +C H K ++RPT + +LD++ ES
Sbjct: 243 -----PHLAS-------EKVYTIMYSCWHEKADERPTFKILLSNILDVMDEES 283
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 131/280 (46%), Gaps = 44/280 (15%)
Query: 44 NKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEM--EFAVEVEILARVRHKNLLSLRG 101
++G G FG+VY G+ W G +AVK L V + + F EV +L + RH N+L G
Sbjct: 30 QRIGSGSFGTVYKGK-WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 102 YCAEGQERLI--------VYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
Y Q ++ +Y ++ E + +DIA +A G+ Y
Sbjct: 88 YSTAPQLAIVTQWCEGSSLYHHL------------HASETKFEMKKLIDIARQTARGMDY 135
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPD-GATHVTTRVKGTLGYLAPE 212
LH + IIHRD+K++N+ L D ++ DFG A +H ++ G++ ++APE
Sbjct: 136 LHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 192
Query: 213 YAMLGKA---SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERKFS-E 268
+ + S DVY+FGI+L EL +G+ P +N+ D + + S +
Sbjct: 193 VIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN------RDQIIEMVGRGSLSPD 246
Query: 269 LADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
L+ R N + +KR++ C K ++RP+ +L
Sbjct: 247 LSKVRSN---CPKRMKRLM---AECLKKKRDERPSFPRIL 280
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 132/290 (45%), Gaps = 53/290 (18%)
Query: 39 NFNYDNKLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLL 97
+ + +LG G FG V +G+ W G +A+K +K + +E EF E +++ + H+ L+
Sbjct: 10 DLTFLKELGTGQFGVVKYGK-WRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLV 67
Query: 98 SLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRM----------DIAIGS 147
L G C + + I+ +YM N CLLN+ R M ++
Sbjct: 68 QLYGVCTKQRPIFIITEYMANG-------------CLLNYLREMRHRFQTQQLLEMCKDV 114
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLG 207
E + YL + +HRD+ A N L++ +V+DFG ++ + D + K +
Sbjct: 115 CEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR 171
Query: 208 YLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKF 266
+ PE M K S D+++FG+L+ E+ S GK P E+ ++ T A L R
Sbjct: 172 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEHIAQGLRLYR-- 227
Query: 267 SELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPT-------MLEVLD 309
P L ++V + +C H K ++RPT +L+V+D
Sbjct: 228 -----PHLAS-------EKVYTIMYSCWHEKADERPTFKILLSNILDVMD 265
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 126/263 (47%), Gaps = 28/263 (10%)
Query: 45 KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCA 104
+LG G FG V+ G +++AVK LK S + F E ++ +++H+ L+ L Y
Sbjct: 28 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAV 84
Query: 105 EGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
QE + I+ +YM N + L N+ +D+A AEG+ ++ + I
Sbjct: 85 VTQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYI 139
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ ++ADFG A+LI D K + + APE G +
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 199
Query: 224 DVYSFGILLLELAS-GKKPIEKV-NSAIKRTITDWALPLACERKFSELADPRLNGNFVEE 281
DV+SFGILL E+ + G+ P + N + + + ER + + + E
Sbjct: 200 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYR-----MVRPDNCPE 245
Query: 282 ELKRVVLVALTCAHSKPEKRPTM 304
EL +++ + C +PE RPT
Sbjct: 246 ELYQLMRL---CWKERPEDRPTF 265
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 137/307 (44%), Gaps = 47/307 (15%)
Query: 34 HSATNNFNYDNKLGEGGFGSVYWGQLWDGSQ------IAVKRLKVWSNKAEMEFAVEVEI 87
H + +LGEG FG V+ + ++ S +AVK LK + A +F E E+
Sbjct: 11 HIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAEL 70
Query: 88 LARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECL------------L 135
L ++H++++ G C +G ++V++YM + + L
Sbjct: 71 LTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGEL 130
Query: 136 NWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGA 195
++ + IA A G+VYL A+ H +HRD+ N L+ A+ ++ DFG ++ D
Sbjct: 131 GLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR---DVY 184
Query: 196 THVTTRVKG----TLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKP-IEKVNSAI 249
+ RV G + ++ PE M K + DV+SFG++L E+ + GK+P + N+ +
Sbjct: 185 STDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV 244
Query: 250 KRTITDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLD 309
IT + L PR+ K V V L C +P++R + E+
Sbjct: 245 IECITQGRV----------LERPRVCP-------KEVYDVMLGCWQREPQQRLNIKEIYK 287
Query: 310 LLKGESK 316
+L K
Sbjct: 288 ILHALGK 294
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 126/263 (47%), Gaps = 28/263 (10%)
Query: 45 KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCA 104
+LG G FG V+ G +++AVK LK S + F E ++ +++H+ L+ L Y
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAV 82
Query: 105 EGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
QE + I+ +YM N + L N+ +D+A AEG+ ++ + I
Sbjct: 83 VTQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYI 137
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ ++ADFG A+LI D K + + APE G +
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 224 DVYSFGILLLELAS-GKKPIEKV-NSAIKRTITDWALPLACERKFSELADPRLNGNFVEE 281
DV+SFGILL E+ + G+ P + N + + + ER + + + E
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYR-----MVRPDNCPE 243
Query: 282 ELKRVVLVALTCAHSKPEKRPTM 304
EL +++ + C +PE RPT
Sbjct: 244 ELYQLMRL---CWKERPEDRPTF 263
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 126/263 (47%), Gaps = 28/263 (10%)
Query: 45 KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCA 104
+LG G FG V+ G +++AVK LK S + F E ++ +++H+ L+ L Y
Sbjct: 29 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAV 85
Query: 105 EGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
QE + I+ +YM N + L N+ +D+A AEG+ ++ + I
Sbjct: 86 VTQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYI 140
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ ++ADFG A+LI D K + + APE G +
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 200
Query: 224 DVYSFGILLLELAS-GKKPIEKV-NSAIKRTITDWALPLACERKFSELADPRLNGNFVEE 281
DV+SFGILL E+ + G+ P + N + + + ER + + + E
Sbjct: 201 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYR-----MVRPDNCPE 246
Query: 282 ELKRVVLVALTCAHSKPEKRPTM 304
EL +++ + C +PE RPT
Sbjct: 247 ELYQLMRL---CWKERPEDRPTF 266
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 126/263 (47%), Gaps = 28/263 (10%)
Query: 45 KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCA 104
+LG G FG V+ G +++AVK LK S + F E ++ +++H+ L+ L Y
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAV 76
Query: 105 EGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
QE + I+ +YM N + L N+ +D+A AEG+ ++ + I
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYI 131
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ ++ADFG A+LI D K + + APE G +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 224 DVYSFGILLLELAS-GKKPIEKV-NSAIKRTITDWALPLACERKFSELADPRLNGNFVEE 281
DV+SFGILL E+ + G+ P + N + + + ER + + + E
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYR-----MVRPDNCPE 237
Query: 282 ELKRVVLVALTCAHSKPEKRPTM 304
EL +++ + C +PE RPT
Sbjct: 238 ELYQLMRL---CWKERPEDRPTF 257
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 126/263 (47%), Gaps = 28/263 (10%)
Query: 45 KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCA 104
+LG G FG V+ G +++AVK LK S + F E ++ +++H+ L+ L Y
Sbjct: 22 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAV 78
Query: 105 EGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
QE + I+ +YM N + L N+ +D+A AEG+ ++ + I
Sbjct: 79 VTQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYI 133
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ ++ADFG A+LI D K + + APE G +
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 224 DVYSFGILLLELAS-GKKPIEKV-NSAIKRTITDWALPLACERKFSELADPRLNGNFVEE 281
DV+SFGILL E+ + G+ P + N + + + ER + + + E
Sbjct: 194 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYR-----MVRPDNCPE 239
Query: 282 ELKRVVLVALTCAHSKPEKRPTM 304
EL +++ + C +PE RPT
Sbjct: 240 ELYQLMRL---CWKERPEDRPTF 259
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 126/263 (47%), Gaps = 28/263 (10%)
Query: 45 KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCA 104
+LG G FG V+ G +++AVK LK S + F E ++ +++H+ L+ L Y
Sbjct: 21 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAV 77
Query: 105 EGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
QE + I+ +YM N + L N+ +D+A AEG+ ++ + I
Sbjct: 78 VTQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYI 132
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ ++ADFG A+LI D K + + APE G +
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 224 DVYSFGILLLELAS-GKKPIEKV-NSAIKRTITDWALPLACERKFSELADPRLNGNFVEE 281
DV+SFGILL E+ + G+ P + N + + + ER + + + E
Sbjct: 193 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYR-----MVRPDNCPE 238
Query: 282 ELKRVVLVALTCAHSKPEKRPTM 304
EL +++ + C +PE RPT
Sbjct: 239 ELYQLMRL---CWKERPEDRPTF 258
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 126/263 (47%), Gaps = 28/263 (10%)
Query: 45 KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCA 104
+LG G FG V+ G +++AVK LK S + F E ++ +++H+ L+ L Y
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAV 76
Query: 105 EGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
QE + I+ +YM N + L N+ +D+A AEG+ ++ + I
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYI 131
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ ++ADFG A+LI D K + + APE G +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 224 DVYSFGILLLELAS-GKKPIEKV-NSAIKRTITDWALPLACERKFSELADPRLNGNFVEE 281
DV+SFGILL E+ + G+ P + N + + + ER + + + E
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYR-----MVRPDNCPE 237
Query: 282 ELKRVVLVALTCAHSKPEKRPTM 304
EL +++ + C +PE RPT
Sbjct: 238 ELYQLMRL---CWKERPEDRPTF 257
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 132/290 (45%), Gaps = 53/290 (18%)
Query: 39 NFNYDNKLGEGGFGSVYWGQLWDGS-QIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLL 97
+ + +LG G FG V +G+ W G +A+K +K + +E EF E +++ + H+ L+
Sbjct: 10 DLTFLKELGTGQFGVVKYGK-WRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLV 67
Query: 98 SLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRM----------DIAIGS 147
L G C + + I+ +YM N CLLN+ R M ++
Sbjct: 68 QLYGVCTKQRPIFIITEYMANG-------------CLLNYLREMRHRFQTQQLLEMCKDV 114
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLG 207
E + YL + +HRD+ A N L++ +V+DFG ++ + D + K +
Sbjct: 115 CEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVR 171
Query: 208 YLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKF 266
+ PE M K S D+++FG+L+ E+ S GK P E+ ++ T A L R
Sbjct: 172 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEHIAQGLRLYR-- 227
Query: 267 SELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPT-------MLEVLD 309
P L ++V + +C H K ++RPT +L+V+D
Sbjct: 228 -----PHLAS-------EKVYTIMYSCWHEKADERPTFKILLSNILDVMD 265
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 126/263 (47%), Gaps = 28/263 (10%)
Query: 45 KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCA 104
+LG G FG V+ G +++AVK LK S + F E ++ +++H+ L+ L Y
Sbjct: 30 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAV 86
Query: 105 EGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
QE + I+ +YM N + L N+ +D+A AEG+ ++ + I
Sbjct: 87 VTQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYI 141
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ ++ADFG A+LI D K + + APE G +
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 201
Query: 224 DVYSFGILLLELAS-GKKPIEKV-NSAIKRTITDWALPLACERKFSELADPRLNGNFVEE 281
DV+SFGILL E+ + G+ P + N + + + ER + + + E
Sbjct: 202 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYR-----MVRPDNCPE 247
Query: 282 ELKRVVLVALTCAHSKPEKRPTM 304
EL +++ + C +PE RPT
Sbjct: 248 ELYQLMRL---CWKERPEDRPTF 267
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 126/263 (47%), Gaps = 28/263 (10%)
Query: 45 KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCA 104
+LG G FG V+ G +++AVK LK S + F E ++ +++H+ L+ L Y
Sbjct: 25 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAV 81
Query: 105 EGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
QE + I+ +YM N + L N+ +D+A AEG+ ++ + I
Sbjct: 82 VTQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYI 136
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ ++ADFG A+LI D K + + APE G +
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 196
Query: 224 DVYSFGILLLELAS-GKKPIEKV-NSAIKRTITDWALPLACERKFSELADPRLNGNFVEE 281
DV+SFGILL E+ + G+ P + N + + + ER + + + E
Sbjct: 197 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYR-----MVRPDNCPE 242
Query: 282 ELKRVVLVALTCAHSKPEKRPTM 304
EL +++ + C +PE RPT
Sbjct: 243 ELYQLMRL---CWKERPEDRPTF 262
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 126/263 (47%), Gaps = 28/263 (10%)
Query: 45 KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCA 104
+LG G FG V+ G +++AVK LK S + F E ++ +++H+ L+ L Y
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAV 82
Query: 105 EGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
QE + I+ +YM N + L N+ +D+A AEG+ ++ + I
Sbjct: 83 VTQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYI 137
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ ++ADFG A+LI D K + + APE G +
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 224 DVYSFGILLLELAS-GKKPIEKV-NSAIKRTITDWALPLACERKFSELADPRLNGNFVEE 281
DV+SFGILL E+ + G+ P + N + + + ER + + + E
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYR-----MVRPDNCPE 243
Query: 282 ELKRVVLVALTCAHSKPEKRPTM 304
EL +++ + C +PE RPT
Sbjct: 244 ELYQLMRL---CWKERPEDRPTF 263
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 126/262 (48%), Gaps = 26/262 (9%)
Query: 45 KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCA 104
+LG G FG V+ G +++AVK LK S + F E ++ +++H+ L+ L Y
Sbjct: 15 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAV 71
Query: 105 EGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
QE + I+ +YM N + L N+ +D+A AEG+ ++ + I
Sbjct: 72 VTQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYI 126
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ ++ADFG A+LI D K + + APE G +
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 224 DVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEE 282
DV+SFGILL E+ + G+ P +T+ + ER + + P + EE
Sbjct: 187 DVWSFGILLTEIVTHGRIPYPG--------MTNPEVIQNLERGY-RMVRP----DNCPEE 233
Query: 283 LKRVVLVALTCAHSKPEKRPTM 304
L +++ + C +PE RPT
Sbjct: 234 LYQLMRL---CWKERPEDRPTF 252
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 10/205 (4%)
Query: 45 KLGEGGFGSVYWGQLWDG-SQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
+LG G FG V+ G W+G +++A+K LK + E F E +I+ +++H L+ L
Sbjct: 16 RLGNGQFGEVWMGT-WNGNTKVAIKTLKPGTMSPE-SFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
+E + IV +YM N L N +D+A A G+ Y+ + I
Sbjct: 74 SE-EPIYIVTEYM-NKGSLLDFLKDGEGRALKLPNL-VDMAAQVAAGMAYIERM---NYI 127
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++++N+L+ ++ADFG A+LI D K + + APE A+ G+ +
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 224 DVYSFGILLLELAS-GKKPIEKVNS 247
DV+SFGILL EL + G+ P +N+
Sbjct: 188 DVWSFGILLTELVTKGRVPYPGMNN 212
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 126/263 (47%), Gaps = 28/263 (10%)
Query: 45 KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCA 104
+LG G FG V+ G +++AVK LK S + F E ++ +++H+ L+ L Y
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAV 76
Query: 105 EGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
QE + I+ +YM N + L N+ +D+A AEG+ ++ + I
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYI 131
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ ++ADFG A+LI D K + + APE G +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 224 DVYSFGILLLELAS-GKKPIEKV-NSAIKRTITDWALPLACERKFSELADPRLNGNFVEE 281
DV+SFGILL E+ + G+ P + N + + + ER + + + E
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYR-----MVRPDNCPE 237
Query: 282 ELKRVVLVALTCAHSKPEKRPTM 304
EL +++ + C +PE RPT
Sbjct: 238 ELYQLMRL---CWKERPEDRPTF 257
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 123/272 (45%), Gaps = 35/272 (12%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCAE 105
+G G FG V + W +A+K+++ S F VE+ L+RV H N++ L G C
Sbjct: 16 VGRGAFGVVCKAK-WRAKDVAIKQIE--SESERKAFIVELRQLSRVNHPNIVKLYGACL- 71
Query: 106 GQERLIVYDY-----MPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
+V +Y + N ++W + ++G+ YLH
Sbjct: 72 -NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPK 124
Query: 161 HIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKA 219
+IHRD+K N+LL A ++ DFG A D TH+T KG+ ++APE
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDFGTAC---DIQTHMTNN-KGSAAWMAPEVFEGSNY 180
Query: 220 SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFV 279
SE CDV+S+GI+L E+ + +KP +++ R + WA+ P L N
Sbjct: 181 SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM--WAV--------HNGTRPPLIKNLP 230
Query: 280 EEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
K + + C P +RP+M E++ ++
Sbjct: 231 ----KPIESLMTRCWSKDPSQRPSMEEIVKIM 258
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 123/272 (45%), Gaps = 35/272 (12%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCAE 105
+G G FG V + W +A+K+++ S F VE+ L+RV H N++ L G C
Sbjct: 17 VGRGAFGVVCKAK-WRAKDVAIKQIE--SESERKAFIVELRQLSRVNHPNIVKLYGACL- 72
Query: 106 GQERLIVYDY-----MPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
+V +Y + N ++W + ++G+ YLH
Sbjct: 73 -NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPK 125
Query: 161 HIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKA 219
+IHRD+K N+LL A ++ DFG A D TH+T KG+ ++APE
Sbjct: 126 ALIHRDLKPPNLLLVAGGTVLKICDFGTAC---DIQTHMTNN-KGSAAWMAPEVFEGSNY 181
Query: 220 SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFV 279
SE CDV+S+GI+L E+ + +KP +++ R + WA+ P L N
Sbjct: 182 SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM--WAV--------HNGTRPPLIKNLP 231
Query: 280 EEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
K + + C P +RP+M E++ ++
Sbjct: 232 ----KPIESLMTRCWSKDPSQRPSMEEIVKIM 259
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 121/276 (43%), Gaps = 26/276 (9%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLL 97
+ + ++G G FG V+ G + ++A+K +K + +E +F E E++ ++ H L+
Sbjct: 27 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKE-GSMSEDDFIEEAEVMMKLSHPKLV 85
Query: 98 SLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
L G C E +V+++M + L + + + EG+ YL
Sbjct: 86 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEA 142
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLG 217
+IHRD+ A N L+ + +V+DFG + + D +T K + + +PE
Sbjct: 143 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 199
Query: 218 KASESCDVYSFGILLLELAS-GKKPIE-KVNSAIKRTITDWALPLACERKFSELADPRLN 275
+ S DV+SFG+L+ E+ S GK P E + NS + I+ L PRL
Sbjct: 200 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF----------RLYKPRLA 249
Query: 276 GNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
V + + C +PE RP +L L
Sbjct: 250 STHVYQIMNH-------CWKERPEDRPAFSRLLRQL 278
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 126/262 (48%), Gaps = 26/262 (9%)
Query: 45 KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCA 104
+LG G FG V+ G +++AVK LK S + F E ++ +++H+ L+ L Y
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAV 72
Query: 105 EGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
QE + I+ +YM N + L N+ +D+A AEG+ ++ + I
Sbjct: 73 VTQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYI 127
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HR+++A+N+L+ ++ADFG A+LI D K + + APE G +
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 187
Query: 224 DVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEE 282
DV+SFGILL E+ + G+ P +T+ + ER + + P + EE
Sbjct: 188 DVWSFGILLTEIVTHGRIPYPG--------MTNPEVIQNLERGY-RMVRP----DNCPEE 234
Query: 283 LKRVVLVALTCAHSKPEKRPTM 304
L +++ + C +PE RPT
Sbjct: 235 LYQLMRL---CWKERPEDRPTF 253
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 120/237 (50%), Gaps = 19/237 (8%)
Query: 46 LGEGGFGSVYWGQLWDGS-----QIAVKRLKV-WSNKAEMEFAVEVEILARVRHKNLLSL 99
+G G FG VY G L S +A+K LK ++ K ++F E I+ + H N++ L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 100 RGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHAT 159
G ++ + +I+ +YM N +L + + + G A G+ YL A
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVL---QLVGMLRGIAAGMKYL---AN 165
Query: 160 PHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG--ATHVTTRVKGTLGYLAPEYAMLG 217
+ +HRD+ A N+L++++ +V+DFG ++++ D AT+ T+ K + + APE
Sbjct: 166 MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR 225
Query: 218 KASESCDVYSFGILLLELAS-GKKPI-EKVNSAIKRTITD---WALPLACERKFSEL 269
K + + DV+SFGI++ E+ + G++P E N + + I D P+ C +L
Sbjct: 226 KFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQL 282
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 129/279 (46%), Gaps = 34/279 (12%)
Query: 41 NYDNKLGEGGFGSVYWGQLWD--GSQI--AVKRLKVWSNKAEM-EFAVEVEILARVRHKN 95
+++ +G G FG VY G L D G +I AVK L ++ E+ +F E I+ H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 96 LLSLRGYC--AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
+LSL G C +EG L+V YM + + + + + A+G+ Y
Sbjct: 92 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKY 147
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPD---GATHVTTRVKGTLGYLA 210
L A+ +HRD+ A N +LD F +VADFG A+ + D + H T K + ++A
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 211 PEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSEL 269
E K + DV+SFG+LL EL + G P VN+ D + L R+
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF------DITVYLLQGRRL--- 255
Query: 270 ADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
L + + L V+ L C H K E RP+ E++
Sbjct: 256 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 287
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 129/279 (46%), Gaps = 34/279 (12%)
Query: 41 NYDNKLGEGGFGSVYWGQLWD--GSQI--AVKRLKVWSNKAEM-EFAVEVEILARVRHKN 95
+++ +G G FG VY G L D G +I AVK L ++ E+ +F E I+ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 96 LLSLRGYC--AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
+LSL G C +EG L+V YM + + + + + A+G+ Y
Sbjct: 93 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKY 148
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG---ATHVTTRVKGTLGYLA 210
L A+ +HRD+ A N +LD F +VADFG A+ + D + H T K + ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 211 PEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSEL 269
E K + DV+SFG+LL EL + G P VN+ D + L R+
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF------DITVYLLQGRRL--- 256
Query: 270 ADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
L + + L V+ L C H K E RP+ E++
Sbjct: 257 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 288
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 129/279 (46%), Gaps = 34/279 (12%)
Query: 41 NYDNKLGEGGFGSVYWGQLWD--GSQI--AVKRLKVWSNKAEM-EFAVEVEILARVRHKN 95
+++ +G G FG VY G L D G +I AVK L ++ E+ +F E I+ H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 96 LLSLRGYC--AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
+LSL G C +EG L+V YM + + + + + A+G+ Y
Sbjct: 92 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKY 147
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG---ATHVTTRVKGTLGYLA 210
L A+ +HRD+ A N +LD F +VADFG A+ + D + H T K + ++A
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 211 PEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSEL 269
E K + DV+SFG+LL EL + G P VN+ D + L R+
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF------DITVYLLQGRRL--- 255
Query: 270 ADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
L + + L V+ L C H K E RP+ E++
Sbjct: 256 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 287
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 120/276 (43%), Gaps = 26/276 (9%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLL 97
+ + ++G G FG V+ G + ++A+K ++ +E +F E E++ ++ H L+
Sbjct: 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLV 68
Query: 98 SLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
L G C E +V+++M + L + + + EG+ YL
Sbjct: 69 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEA 125
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLG 217
+IHRD+ A N L+ + +V+DFG + + D +T K + + +PE
Sbjct: 126 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 182
Query: 218 KASESCDVYSFGILLLELAS-GKKPIE-KVNSAIKRTITDWALPLACERKFSELADPRLN 275
+ S DV+SFG+L+ E+ S GK P E + NS + I+ L PRL
Sbjct: 183 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF----------RLYKPRLA 232
Query: 276 GNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
V + + C +PE RP +L L
Sbjct: 233 STHVYQIMNH-------CWRERPEDRPAFSRLLRQL 261
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 120/276 (43%), Gaps = 26/276 (9%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLL 97
+ + ++G G FG V+ G + ++A+K ++ +E +F E E++ ++ H L+
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLV 63
Query: 98 SLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
L G C E +V+++M + L + + + EG+ YL
Sbjct: 64 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEA 120
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLG 217
+IHRD+ A N L+ + +V+DFG + + D +T K + + +PE
Sbjct: 121 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 177
Query: 218 KASESCDVYSFGILLLELAS-GKKPIE-KVNSAIKRTITDWALPLACERKFSELADPRLN 275
+ S DV+SFG+L+ E+ S GK P E + NS + I+ L PRL
Sbjct: 178 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF----------RLYKPRLA 227
Query: 276 GNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
V + + C +PE RP +L L
Sbjct: 228 STHVYQIMNH-------CWKERPEDRPAFSRLLRQL 256
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 129/279 (46%), Gaps = 34/279 (12%)
Query: 41 NYDNKLGEGGFGSVYWGQLWD--GSQI--AVKRLKVWSNKAEM-EFAVEVEILARVRHKN 95
+++ +G G FG VY G L D G +I AVK L ++ E+ +F E I+ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 96 LLSLRGYC--AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
+LSL G C +EG L+V YM + + + + + A+G+ Y
Sbjct: 93 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKY 148
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG---ATHVTTRVKGTLGYLA 210
L A+ +HRD+ A N +LD F +VADFG A+ + D + H T K + ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 211 PEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSEL 269
E K + DV+SFG+LL EL + G P VN+ D + L R+
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF------DITVYLLQGRRL--- 256
Query: 270 ADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
L + + L V+ L C H K E RP+ E++
Sbjct: 257 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 288
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 120/276 (43%), Gaps = 26/276 (9%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLL 97
+ + ++G G FG V+ G + ++A+K ++ +E +F E E++ ++ H L+
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLV 65
Query: 98 SLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
L G C E +V+++M + L + + + EG+ YL
Sbjct: 66 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEA 122
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLG 217
+IHRD+ A N L+ + +V+DFG + + D +T K + + +PE
Sbjct: 123 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 179
Query: 218 KASESCDVYSFGILLLELAS-GKKPIE-KVNSAIKRTITDWALPLACERKFSELADPRLN 275
+ S DV+SFG+L+ E+ S GK P E + NS + I+ L PRL
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF----------RLYKPRLA 229
Query: 276 GNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
V + + C +PE RP +L L
Sbjct: 230 STHVYQIMNH-------CWKERPEDRPAFSRLLRQL 258
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 33/219 (15%)
Query: 44 NKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEM--EFAVEVEILARVRHKNLLSLRG 101
++G G FG+VY G+ W G +AVK LKV E F EV +L + RH N+L G
Sbjct: 42 TRIGSGSFGTVYKGK-WHGD-VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 102 YCAEGQERLI--------VYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
Y + ++ +Y ++ E + +DIA +A+G+ Y
Sbjct: 100 YMTKDNLAIVTQWCEGSSLYKHL------------HVQETKFQMFQLIDIARQTAQGMDY 147
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP--DGATHVTTRVKGTLGYLAP 211
LH +IIHRD+K++N+ L ++ DFG A + G+ V + G++ ++AP
Sbjct: 148 LH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV-EQPTGSVLWMAP 203
Query: 212 EYAML---GKASESCDVYSFGILLLELASGKKPIEKVNS 247
E + S DVYS+GI+L EL +G+ P +N+
Sbjct: 204 EVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN 242
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 121/276 (43%), Gaps = 26/276 (9%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLL 97
+ + ++G G FG V+ G + ++A+K ++ +E +F E E++ ++ H L+
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLV 65
Query: 98 SLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
L G C E +V+++M + L + + + EG+ YL
Sbjct: 66 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEA 122
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLG 217
+ +IHRD+ A N L+ + +V+DFG + + D +T K + + +PE
Sbjct: 123 S---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 179
Query: 218 KASESCDVYSFGILLLELAS-GKKPIE-KVNSAIKRTITDWALPLACERKFSELADPRLN 275
+ S DV+SFG+L+ E+ S GK P E + NS + I+ L PRL
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF----------RLYKPRLA 229
Query: 276 GNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
V + + C +PE RP +L L
Sbjct: 230 STHVYQIMNH-------CWKERPEDRPAFSRLLRQL 258
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 129/279 (46%), Gaps = 34/279 (12%)
Query: 41 NYDNKLGEGGFGSVYWGQLWD--GSQI--AVKRLKVWSNKAEM-EFAVEVEILARVRHKN 95
+++ +G G FG VY G L D G +I AVK L ++ E+ +F E I+ H N
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 96 LLSLRGYC--AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
+LSL G C +EG L+V YM + + + + + A+G+ Y
Sbjct: 90 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKY 145
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG---ATHVTTRVKGTLGYLA 210
L A+ +HRD+ A N +LD F +VADFG A+ + D + H T K + ++A
Sbjct: 146 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 211 PEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSEL 269
E K + DV+SFG+LL EL + G P VN+ D + L R+
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF------DITVYLLQGRRL--- 253
Query: 270 ADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
L + + L V+ L C H K E RP+ E++
Sbjct: 254 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 285
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 129/279 (46%), Gaps = 34/279 (12%)
Query: 41 NYDNKLGEGGFGSVYWGQLWD--GSQI--AVKRLKVWSNKAEM-EFAVEVEILARVRHKN 95
+++ +G G FG VY G L D G +I AVK L ++ E+ +F E I+ H N
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 96 LLSLRGYC--AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
+LSL G C +EG L+V YM + + + + + A+G+ Y
Sbjct: 88 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKY 143
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG---ATHVTTRVKGTLGYLA 210
L A+ +HRD+ A N +LD F +VADFG A+ + D + H T K + ++A
Sbjct: 144 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 211 PEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSEL 269
E K + DV+SFG+LL EL + G P VN+ D + L R+
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF------DITVYLLQGRRL--- 251
Query: 270 ADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
L + + L V+ L C H K E RP+ E++
Sbjct: 252 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 283
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 129/279 (46%), Gaps = 34/279 (12%)
Query: 41 NYDNKLGEGGFGSVYWGQLWD--GSQI--AVKRLKVWSNKAEM-EFAVEVEILARVRHKN 95
+++ +G G FG VY G L D G +I AVK L ++ E+ +F E I+ H N
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 96 LLSLRGYC--AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
+LSL G C +EG L+V YM + + + + + A+G+ Y
Sbjct: 111 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKY 166
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG---ATHVTTRVKGTLGYLA 210
L A+ +HRD+ A N +LD F +VADFG A+ + D + H T K + ++A
Sbjct: 167 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 211 PEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSEL 269
E K + DV+SFG+LL EL + G P VN+ D + L R+
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF------DITVYLLQGRRL--- 274
Query: 270 ADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
L + + L V+ L C H K E RP+ E++
Sbjct: 275 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 306
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 129/279 (46%), Gaps = 34/279 (12%)
Query: 41 NYDNKLGEGGFGSVYWGQLWD--GSQI--AVKRLKVWSNKAEM-EFAVEVEILARVRHKN 95
+++ +G G FG VY G L D G +I AVK L ++ E+ +F E I+ H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 96 LLSLRGYC--AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
+LSL G C +EG L+V YM + + + + + A+G+ Y
Sbjct: 91 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKY 146
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG---ATHVTTRVKGTLGYLA 210
L A+ +HRD+ A N +LD F +VADFG A+ + D + H T K + ++A
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 211 PEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSEL 269
E K + DV+SFG+LL EL + G P VN+ D + L R+
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF------DITVYLLQGRRL--- 254
Query: 270 ADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
L + + L V+ L C H K E RP+ E++
Sbjct: 255 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 286
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 129/279 (46%), Gaps = 34/279 (12%)
Query: 41 NYDNKLGEGGFGSVYWGQLWD--GSQI--AVKRLKVWSNKAEM-EFAVEVEILARVRHKN 95
+++ +G G FG VY G L D G +I AVK L ++ E+ +F E I+ H N
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 96 LLSLRGYC--AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
+LSL G C +EG L+V YM + + + + + A+G+ Y
Sbjct: 85 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKY 140
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG---ATHVTTRVKGTLGYLA 210
L A+ +HRD+ A N +LD F +VADFG A+ + D + H T K + ++A
Sbjct: 141 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 211 PEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSEL 269
E K + DV+SFG+LL EL + G P VN+ D + L R+
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF------DITVYLLQGRRL--- 248
Query: 270 ADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
L + + L V+ L C H K E RP+ E++
Sbjct: 249 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 280
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 125/263 (47%), Gaps = 28/263 (10%)
Query: 45 KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCA 104
+LG G G V+ G +++AVK LK S + F E ++ +++H+ L+ L Y
Sbjct: 20 RLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAV 76
Query: 105 EGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
QE + I+ +YM N + L N+ +D+A AEG+ ++ + I
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYI 131
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD++A+N+L+ ++ADFG A+LI D K + + APE G +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 224 DVYSFGILLLELAS-GKKPIEKV-NSAIKRTITDWALPLACERKFSELADPRLNGNFVEE 281
DV+SFGILL E+ + G+ P + N + + + ER + + + E
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYR-----MVRPDNCPE 237
Query: 282 ELKRVVLVALTCAHSKPEKRPTM 304
EL +++ + C +PE RPT
Sbjct: 238 ELYQLMRL---CWKERPEDRPTF 257
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 26/271 (9%)
Query: 43 DNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGY 102
+ KLG G FG V+ +++AVK +K S E F E ++ ++H L+ L
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHAV 78
Query: 103 CAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHI 162
+ + I+ ++M + L + +D + AEG+ ++ +
Sbjct: 79 VTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQR---NY 132
Query: 163 IHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASES 222
IHRD++A+N+L+ A ++ADFG A++I D K + + APE G +
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 192
Query: 223 CDVYSFGILLLELAS-GKKPIEKV-NSAIKRTITDWALPLACERKFSELADPRLNGNFVE 280
DV+SFGILL+E+ + G+ P + N + R A ER + PR
Sbjct: 193 SDVWSFGILLMEIVTYGRIPYPGMSNPEVIR---------ALERGYRM---PRPEN--CP 238
Query: 281 EELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
EEL ++ + C ++PE+RPT + +L
Sbjct: 239 EELYNIM---MRCWKNRPEERPTFEYIQSVL 266
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 129/279 (46%), Gaps = 34/279 (12%)
Query: 41 NYDNKLGEGGFGSVYWGQLWD--GSQI--AVKRLKVWSNKAEM-EFAVEVEILARVRHKN 95
+++ +G G FG VY G L D G +I AVK L ++ E+ +F E I+ H N
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 96 LLSLRGYC--AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
+LSL G C +EG L+V YM + + + + + A+G+ Y
Sbjct: 112 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKY 167
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG---ATHVTTRVKGTLGYLA 210
L A+ +HRD+ A N +LD F +VADFG A+ + D + H T K + ++A
Sbjct: 168 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 211 PEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSEL 269
E K + DV+SFG+LL EL + G P VN+ D + L R+
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF------DITVYLLQGRRL--- 275
Query: 270 ADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
L + + L V+ L C H K E RP+ E++
Sbjct: 276 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 307
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 26/271 (9%)
Query: 43 DNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGY 102
+ KLG G FG V+ +++AVK +K S E F E ++ ++H L+ L
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAV 251
Query: 103 CAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHI 162
+ + I+ ++M + L + +D + AEG+ ++ +
Sbjct: 252 VTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQR---NY 305
Query: 163 IHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASES 222
IHRD++A+N+L+ A ++ADFG A++I D K + + APE G +
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 365
Query: 223 CDVYSFGILLLELAS-GKKPIEKV-NSAIKRTITDWALPLACERKFSELADPRLNGNFVE 280
DV+SFGILL+E+ + G+ P + N + R A ER + PR
Sbjct: 366 SDVWSFGILLMEIVTYGRIPYPGMSNPEVIR---------ALERGYRM---PRPEN--CP 411
Query: 281 EELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
EEL ++ + C ++PE+RPT + +L
Sbjct: 412 EELYNIM---MRCWKNRPEERPTFEYIQSVL 439
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 129/279 (46%), Gaps = 34/279 (12%)
Query: 41 NYDNKLGEGGFGSVYWGQLWD--GSQI--AVKRLKVWSNKAEM-EFAVEVEILARVRHKN 95
+++ +G G FG VY G L D G +I AVK L ++ E+ +F E I+ H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 96 LLSLRGYC--AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
+LSL G C +EG L+V YM + + + + + A+G+ +
Sbjct: 91 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKF 146
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPD---GATHVTTRVKGTLGYLA 210
L A+ +HRD+ A N +LD F +VADFG A+ + D + H T K + ++A
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 211 PEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSEL 269
E K + DV+SFG+LL EL + G P VN+ D + L R+
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF------DITVYLLQGRRL--- 254
Query: 270 ADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
L + + L V+ L C H K E RP+ E++
Sbjct: 255 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 286
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 129/279 (46%), Gaps = 34/279 (12%)
Query: 41 NYDNKLGEGGFGSVYWGQLWD--GSQI--AVKRLKVWSNKAEM-EFAVEVEILARVRHKN 95
+++ +G G FG VY G L D G +I AVK L ++ E+ +F E I+ H N
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 96 LLSLRGYC--AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
+LSL G C +EG L+V YM + + + + + A+G+ +
Sbjct: 98 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKF 153
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPD---GATHVTTRVKGTLGYLA 210
L A+ +HRD+ A N +LD F +VADFG A+ + D + H T K + ++A
Sbjct: 154 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 211 PEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSEL 269
E K + DV+SFG+LL EL + G P VN+ D + L R+
Sbjct: 211 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF------DITVYLLQGRRL--- 261
Query: 270 ADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
L + + L V+ L C H K E RP+ E++
Sbjct: 262 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 293
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 45 KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCA 104
+LG G FG V+ G + +++AVK LK + + F E ++ ++H L+ L
Sbjct: 20 RLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQ-AFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 105 EGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIH 164
+ I+ +YM + LL + +D + AEG+ Y+ + IH
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIERK---NYIH 133
Query: 165 RDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCD 224
RD++A+NVL+ ++ADFG A++I D K + + APE G + D
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSD 193
Query: 225 VYSFGILLLELAS-GKKP 241
V+SFGILL E+ + GK P
Sbjct: 194 VWSFGILLYEIVTYGKIP 211
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 129/279 (46%), Gaps = 34/279 (12%)
Query: 41 NYDNKLGEGGFGSVYWGQLWD--GSQI--AVKRLKVWSNKAEM-EFAVEVEILARVRHKN 95
+++ +G G FG VY G L D G +I AVK L ++ E+ +F E I+ H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 96 LLSLRGYC--AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
+LSL G C +EG L+V YM + + + + + A+G+ +
Sbjct: 94 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKF 149
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPD---GATHVTTRVKGTLGYLA 210
L A+ +HRD+ A N +LD F +VADFG A+ + D + H T K + ++A
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 211 PEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSEL 269
E K + DV+SFG+LL EL + G P VN+ D + L R+
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF------DITVYLLQGRRL--- 257
Query: 270 ADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
L + + L V+ L C H K E RP+ E++
Sbjct: 258 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 289
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 129/279 (46%), Gaps = 34/279 (12%)
Query: 41 NYDNKLGEGGFGSVYWGQLWD--GSQI--AVKRLKVWSNKAEM-EFAVEVEILARVRHKN 95
+++ +G G FG VY G L D G +I AVK L ++ E+ +F E I+ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 96 LLSLRGYC--AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
+LSL G C +EG L+V YM + + + + + A+G+ +
Sbjct: 93 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKF 148
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPD---GATHVTTRVKGTLGYLA 210
L A+ +HRD+ A N +LD F +VADFG A+ + D + H T K + ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 211 PEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSEL 269
E K + DV+SFG+LL EL + G P VN+ D + L R+
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF------DITVYLLQGRRL--- 256
Query: 270 ADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
L + + L V+ L C H K E RP+ E++
Sbjct: 257 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 288
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 129/279 (46%), Gaps = 34/279 (12%)
Query: 41 NYDNKLGEGGFGSVYWGQLWD--GSQI--AVKRLKVWSNKAEM-EFAVEVEILARVRHKN 95
+++ +G G FG VY G L D G +I AVK L ++ E+ +F E I+ H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 96 LLSLRGYC--AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
+LSL G C +EG L+V YM + + + + + A+G+ +
Sbjct: 94 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKF 149
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPD---GATHVTTRVKGTLGYLA 210
L A+ +HRD+ A N +LD F +VADFG A+ + D + H T K + ++A
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 211 PEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSEL 269
E K + DV+SFG+LL EL + G P VN+ D + L R+
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF------DITVYLLQGRRL--- 257
Query: 270 ADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
L + + L V+ L C H K E RP+ E++
Sbjct: 258 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 289
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 129/279 (46%), Gaps = 34/279 (12%)
Query: 41 NYDNKLGEGGFGSVYWGQLWD--GSQI--AVKRLKVWSNKAEM-EFAVEVEILARVRHKN 95
+++ +G G FG VY G L D G +I AVK L ++ E+ +F E I+ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 96 LLSLRGYC--AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
+LSL G C +EG L+V YM + + + + + A+G+ +
Sbjct: 93 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKF 148
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPD---GATHVTTRVKGTLGYLA 210
L A+ +HRD+ A N +LD F +VADFG A+ + D + H T K + ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 211 PEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSEL 269
E K + DV+SFG+LL EL + G P VN+ D + L R+
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF------DITVYLLQGRRL--- 256
Query: 270 ADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
L + + L V+ L C H K E RP+ E++
Sbjct: 257 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 288
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 129/279 (46%), Gaps = 34/279 (12%)
Query: 41 NYDNKLGEGGFGSVYWGQLWD--GSQI--AVKRLKVWSNKAEM-EFAVEVEILARVRHKN 95
+++ +G G FG VY G L D G +I AVK L ++ E+ +F E I+ H N
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 96 LLSLRGYC--AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
+LSL G C +EG L+V YM + + + + + A+G+ +
Sbjct: 152 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKF 207
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPD---GATHVTTRVKGTLGYLA 210
L A+ +HRD+ A N +LD F +VADFG A+ + D + H T K + ++A
Sbjct: 208 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 211 PEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSEL 269
E K + DV+SFG+LL EL + G P VN+ D + L R+
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF------DITVYLLQGRRL--- 315
Query: 270 ADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
L + + L V+ L C H K E RP+ E++
Sbjct: 316 ----LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 347
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 119/276 (43%), Gaps = 26/276 (9%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLL 97
+ + ++G G FG V+ G + ++A+K ++ +E +F E E++ ++ H L+
Sbjct: 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLV 66
Query: 98 SLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
L G C E +V ++M + L + + + EG+ YL
Sbjct: 67 QLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEA 123
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLG 217
+IHRD+ A N L+ + +V+DFG + + D +T K + + +PE
Sbjct: 124 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 180
Query: 218 KASESCDVYSFGILLLELAS-GKKPIE-KVNSAIKRTITDWALPLACERKFSELADPRLN 275
+ S DV+SFG+L+ E+ S GK P E + NS + I+ L PRL
Sbjct: 181 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS----------TGFRLYKPRLA 230
Query: 276 GNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
V + + C +PE RP +L L
Sbjct: 231 STHVYQIMNH-------CWRERPEDRPAFSRLLRQL 259
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 16/219 (7%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQ----IAVKRLKV-WSNKAEMEFAVEV 85
KEL + N + D +G G FG V G+L S+ +A+K LKV ++ K +F E
Sbjct: 40 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 86 EILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAI 145
I+ + H N++ L G + + +IV +YM N ++ + + +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLR 154
Query: 146 GSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG--ATHVTTRVK 203
G A G+ YL +HRD+ A N+L++++ +V+DFG A+++ D A + T K
Sbjct: 155 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGK 211
Query: 204 GTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKP 241
+ + +PE K + + DV+S+GI+L E+ S G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 15/224 (6%)
Query: 19 GKKQPTWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAE 78
G P W I + KLG G FG V+ G + +++AVK LK + +
Sbjct: 1 GAMDPAWEI--------PRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQ 52
Query: 79 MEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWN 138
F E ++ ++H L+ L + + I+ ++M + LL
Sbjct: 53 -AFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP-- 109
Query: 139 RRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHV 198
+ +D + AEG+ Y+ + IHRD++A+NVL+ ++ADFG A++I D
Sbjct: 110 KLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA 166
Query: 199 TTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKP 241
K + + APE G + +V+SFGILL E+ + GK P
Sbjct: 167 REGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 112/219 (51%), Gaps = 16/219 (7%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQ----IAVKRLKV-WSNKAEMEFAVEV 85
KEL + N + D +G G FG V G+L S+ +A+K LKV ++ K +F E
Sbjct: 40 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 86 EILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAI 145
I+ + H N++ L G + + +IV +YM N ++ + + +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLR 154
Query: 146 GSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG--ATHVTTRVK 203
G A G+ YL +HRD+ A N+L++++ +V+DFG ++++ D A + T K
Sbjct: 155 GIASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 204 GTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKP 241
+ + +PE K + + DV+S+GI+L E+ S G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 135/301 (44%), Gaps = 47/301 (15%)
Query: 19 GKKQPTWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLW-DGSQIAVKRLKVWSNKA 77
G + P R+ +L A N Y+ ++G+GGFG V+ G+L D S +A+K L + ++
Sbjct: 5 GSEFPKSRLPTL-----ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEG 59
Query: 78 E-------MEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXX 130
E EF EV I++ + H N++ L G +V +++P
Sbjct: 60 ETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH 117
Query: 131 XECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLL-----DADFKAQVADF 185
+ W+ ++ + + A GI Y+ + P I+HRD+++ N+ L +A A+VADF
Sbjct: 118 P---IKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173
Query: 186 GFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASES----CDVYSFGILLLELASGKKP 241
G ++ + H + + G ++APE +G ES D YSF ++L + +G+ P
Sbjct: 174 GLSQ----QSVHSVSGLLGNFQWMAPE--TIGAEEESYTEKADTYSFAMILYTILTGEGP 227
Query: 242 IEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKR 301
++ + K + E PRL N +E C P+KR
Sbjct: 228 FDEYSYG-KIKFINMIREEGLRPTIPEDCPPRLR-NVIE-----------LCWSGDPKKR 274
Query: 302 P 302
P
Sbjct: 275 P 275
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 112/219 (51%), Gaps = 16/219 (7%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQ----IAVKRLKV-WSNKAEMEFAVEV 85
KEL + N + D +G G FG V G+L S+ +A+K LKV ++ K +F E
Sbjct: 11 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 68
Query: 86 EILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAI 145
I+ + H N++ L G + + +IV +YM N ++ + + +
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLR 125
Query: 146 GSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG--ATHVTTRVK 203
G A G+ YL +HRD+ A N+L++++ +V+DFG ++++ D A + T K
Sbjct: 126 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 182
Query: 204 GTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKP 241
+ + +PE K + + DV+S+GI+L E+ S G++P
Sbjct: 183 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 112/219 (51%), Gaps = 16/219 (7%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQ----IAVKRLKV-WSNKAEMEFAVEV 85
KEL + N + D +G G FG V G+L S+ +A+K LKV ++ K +F E
Sbjct: 38 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 95
Query: 86 EILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAI 145
I+ + H N++ L G + + +IV +YM N ++ + + +
Sbjct: 96 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLR 152
Query: 146 GSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG--ATHVTTRVK 203
G A G+ YL +HRD+ A N+L++++ +V+DFG ++++ D A + T K
Sbjct: 153 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 209
Query: 204 GTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKP 241
+ + +PE K + + DV+S+GI+L E+ S G++P
Sbjct: 210 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 112/219 (51%), Gaps = 16/219 (7%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQ----IAVKRLKV-WSNKAEMEFAVEV 85
KEL + N + D +G G FG V G+L S+ +A+K LKV ++ K +F E
Sbjct: 40 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 86 EILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAI 145
I+ + H N++ L G + + +IV +YM N ++ + + +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLR 154
Query: 146 GSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG--ATHVTTRVK 203
G A G+ YL +HRD+ A N+L++++ +V+DFG ++++ D A + T K
Sbjct: 155 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 204 GTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKP 241
+ + +PE K + + DV+S+GI+L E+ S G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 122/278 (43%), Gaps = 38/278 (13%)
Query: 46 LGEGGFGSVYWGQLWDGSQ----IAVKRLKV-WSNKAEMEFAVEVEILARVRHKNLLSLR 100
+G G G V +G+L Q +A+K LK ++ + +F E I+ + H N++ L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
G G+ +IV +YM N ++ + + G G+ YL
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQL---VGMLRGVGAGMRYLSDLG-- 171
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPD--GATHVTTRVKGTLGYLAPEYAMLGK 218
+HRD+ A NVL+D++ +V+DFG ++++ D A + TT K + + APE
Sbjct: 172 -YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT 230
Query: 219 ASESCDVYSFGILLLE-LASGKKPI-EKVNSAIKRTITD---WALPLACERKFSELADPR 273
S + DV+SFG+++ E LA G++P N + ++ + P+ C +L
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQL---- 286
Query: 274 LNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
L C H +RP +++ +L
Sbjct: 287 ----------------MLDCWHKDRAQRPRFSQIVSVL 308
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 112/219 (51%), Gaps = 16/219 (7%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQ----IAVKRLKV-WSNKAEMEFAVEV 85
KEL + N + D +G G FG V G+L S+ +A+K LKV ++ K +F E
Sbjct: 28 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 85
Query: 86 EILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAI 145
I+ + H N++ L G + + +IV +YM N ++ + + +
Sbjct: 86 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLR 142
Query: 146 GSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG--ATHVTTRVK 203
G A G+ YL +HRD+ A N+L++++ +V+DFG ++++ D A + T K
Sbjct: 143 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 199
Query: 204 GTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKP 241
+ + +PE K + + DV+S+GI+L E+ S G++P
Sbjct: 200 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 112/219 (51%), Gaps = 16/219 (7%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQ----IAVKRLKV-WSNKAEMEFAVEV 85
KEL + N + D +G G FG V G+L S+ +A+K LKV ++ K +F E
Sbjct: 40 KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 86 EILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAI 145
I+ + H N++ L G + + +IV +YM N ++ + + +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLR 154
Query: 146 GSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG--ATHVTTRVK 203
G A G+ YL +HRD+ A N+L++++ +V+DFG ++++ D A + T K
Sbjct: 155 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 204 GTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKP 241
+ + +PE K + + DV+S+GI+L E+ S G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 106/223 (47%), Gaps = 22/223 (9%)
Query: 45 KLGEGGFGSVYWGQL------WDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLS 98
+LGEG FG V+ + D +AVK LK S A +F E E+L ++H++++
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECL-----------LNWNRRMDIAIGS 147
G C EG+ L+V++YM + L L + + +A
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATH-VTTRVKGTL 206
A G+VYL A H +HRD+ N L+ ++ DFG ++ I + V R +
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
++ PE + K + DV+SFG++L E+ + GK+P ++++
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 244
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 112/219 (51%), Gaps = 16/219 (7%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQ----IAVKRLKV-WSNKAEMEFAVEV 85
KEL + N + D +G G FG V G+L S+ +A+K LKV ++ K +F E
Sbjct: 40 KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 86 EILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAI 145
I+ + H N++ L G + + +IV +YM N ++ + + +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLR 154
Query: 146 GSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG--ATHVTTRVK 203
G A G+ YL +HRD+ A N+L++++ +V+DFG ++++ D A + T K
Sbjct: 155 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 204 GTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKP 241
+ + +PE K + + DV+S+GI+L E+ S G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 112/219 (51%), Gaps = 16/219 (7%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQ----IAVKRLKV-WSNKAEMEFAVEV 85
KEL + N + D +G G FG V G+L S+ +A+K LKV ++ K +F E
Sbjct: 40 KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 86 EILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAI 145
I+ + H N++ L G + + +IV +YM N ++ + + +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLR 154
Query: 146 GSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG--ATHVTTRVK 203
G A G+ YL +HRD+ A N+L++++ +V+DFG ++++ D A + T K
Sbjct: 155 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 204 GTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKP 241
+ + +PE K + + DV+S+GI+L E+ S G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 106/223 (47%), Gaps = 22/223 (9%)
Query: 45 KLGEGGFGSVYWGQL------WDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLS 98
+LGEG FG V+ + D +AVK LK S A +F E E+L ++H++++
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECL-----------LNWNRRMDIAIGS 147
G C EG+ L+V++YM + L L + + +A
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATH-VTTRVKGTL 206
A G+VYL A H +HRD+ N L+ ++ DFG ++ I + V R +
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
++ PE + K + DV+SFG++L E+ + GK+P ++++
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 238
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 22/223 (9%)
Query: 45 KLGEGGFGSVYWGQL------WDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLS 98
+LGEG FG V+ + D +AVK LK S A +F E E+L ++H++++
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECL-----------LNWNRRMDIAIGS 147
G C EG+ L+V++YM + L L + + +A
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAK-LIPDGATHVTTRVKGTL 206
A G+VYL A H +HRD+ N L+ ++ DFG ++ + V R +
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
++ PE + K + DV+SFG++L E+ + GK+P ++++
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 267
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 16/219 (7%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQ----IAVKRLKV-WSNKAEMEFAVEV 85
KEL + N + D +G G FG V G+L S+ +A+K LKV ++ K +F E
Sbjct: 40 KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 86 EILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAI 145
I+ + H N++ L G + + +IV +YM N ++ + + +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLR 154
Query: 146 GSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG--ATHVTTRVK 203
G A G+ YL +HRD+ A N+L++++ +V+DFG +++ D A + T K
Sbjct: 155 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGK 211
Query: 204 GTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKP 241
+ + +PE K + + DV+S+GI+L E+ S G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 135/301 (44%), Gaps = 47/301 (15%)
Query: 19 GKKQPTWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLW-DGSQIAVKRLKVWSNKA 77
G + P R+ +L A N Y+ ++G+GGFG V+ G+L D S +A+K L + ++
Sbjct: 5 GSEFPKSRLPTL-----ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEG 59
Query: 78 E-------MEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXX 130
E EF EV I++ + H N++ L G +V +++P
Sbjct: 60 ETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH 117
Query: 131 XECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLL-----DADFKAQVADF 185
+ W+ ++ + + A GI Y+ + P I+HRD+++ N+ L +A A+VADF
Sbjct: 118 P---IKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173
Query: 186 GFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASES----CDVYSFGILLLELASGKKP 241
G ++ + H + + G ++APE +G ES D YSF ++L + +G+ P
Sbjct: 174 GTSQ----QSVHSVSGLLGNFQWMAPE--TIGAEEESYTEKADTYSFAMILYTILTGEGP 227
Query: 242 IEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKR 301
++ + K + E PRL N +E C P+KR
Sbjct: 228 FDEYSYG-KIKFINMIREEGLRPTIPEDCPPRLR-NVIE-----------LCWSGDPKKR 274
Query: 302 P 302
P
Sbjct: 275 P 275
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 107/204 (52%), Gaps = 14/204 (6%)
Query: 46 LGEGGFGSVYWGQL-WDGSQ---IAVKRLKV-WSNKAEMEFAVEVEILARVRHKNLLSLR 100
+G G FG V G+L G + +A+K LKV ++ K +F E I+ + H N++ L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
G G+ +IV ++M N ++ + + + G A G+ YL A
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVI---QLVGMLRGIAAGMRYL---ADM 164
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG--ATHVTTRVKGTLGYLAPEYAMLGK 218
+HRD+ A N+L++++ +V+DFG +++I D A + TT K + + APE K
Sbjct: 165 GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRK 224
Query: 219 ASESCDVYSFGILLLELAS-GKKP 241
+ + DV+S+GI++ E+ S G++P
Sbjct: 225 FTSASDVWSYGIVMWEVMSYGERP 248
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 122/279 (43%), Gaps = 40/279 (14%)
Query: 46 LGEGGFGSVYWGQLWDGSQ----IAVKRLKV-WSNKAEMEFAVEVEILARVRHKNLLSLR 100
+G G G V +G+L Q +A+K LK ++ + +F E I+ + H N++ L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
G G+ +IV +YM N ++ + + G G+ YL
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQL---VGMLRGVGAGMRYLSDLG-- 171
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLI---PDGATHVTTRVKGTLGYLAPEYAMLG 217
+HRD+ A NVL+D++ +V+DFG ++++ PD A TT K + + APE
Sbjct: 172 -YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAX-TTTGGKIPIRWTAPEAIAFR 229
Query: 218 KASESCDVYSFGILLLE-LASGKKPI-EKVNSAIKRTITD---WALPLACERKFSELADP 272
S + DV+SFG+++ E LA G++P N + ++ + P+ C +L
Sbjct: 230 TFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQL--- 286
Query: 273 RLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
L C H +RP +++ +L
Sbjct: 287 -----------------MLDCWHKDRAQRPRFSQIVSVL 308
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 44 NKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAE---MEFAVEVEILARVRHKNLLSL 99
+KLG GG +VY + ++A+K + + + E F EV +++ H+N++S+
Sbjct: 17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76
Query: 100 RGYCAEGQERLIVYDYM--PNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
E +V +Y+ P + +N+ ++ +GI + H
Sbjct: 77 IDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQI------LDGIKHAHDM 130
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLG 217
I+HRDIK N+L+D++ ++ DFG AK + + + T V GT+ Y +PE A G
Sbjct: 131 ---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAK-G 186
Query: 218 KASESC-DVYSFGILLLELASGKKP 241
+A++ C D+YS GI+L E+ G+ P
Sbjct: 187 EATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQRTATYITELANAL 126
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P T + GTL YL P
Sbjct: 127 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPP 180
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 138
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P T + GTL YL P
Sbjct: 139 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPP 192
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 193 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 134/301 (44%), Gaps = 47/301 (15%)
Query: 19 GKKQPTWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLW-DGSQIAVKRLKVWSNKA 77
G + P R+ +L A N Y+ ++G+GGFG V+ G+L D S +A+K L + ++
Sbjct: 5 GSEFPKSRLPTL-----ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEG 59
Query: 78 E-------MEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXX 130
E EF EV I++ + H N++ L G +V +++P
Sbjct: 60 ETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH 117
Query: 131 XECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLL-----DADFKAQVADF 185
+ W+ ++ + + A GI Y+ + P I+HRD+++ N+ L +A A+VADF
Sbjct: 118 P---IKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173
Query: 186 GFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASES----CDVYSFGILLLELASGKKP 241
++ + H + + G ++APE +G ES D YSF ++L + +G+ P
Sbjct: 174 SLSQ----QSVHSVSGLLGNFQWMAPE--TIGAEEESYTEKADTYSFAMILYTILTGEGP 227
Query: 242 IEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKR 301
++ + K + E PRL N +E C P+KR
Sbjct: 228 FDEYSYG-KIKFINMIREEGLRPTIPEDCPPRLR-NVIE-----------LCWSGDPKKR 274
Query: 302 P 302
P
Sbjct: 275 P 275
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 122
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P T + GTL YL P
Sbjct: 123 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR---TTLSGTLDYLPP 176
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 147
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P T + GTL YL P
Sbjct: 148 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPP 201
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 126
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P T + GTL YL P
Sbjct: 127 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPP 180
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 181 EXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 124
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P T + GTL YL P
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPP 178
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 16/219 (7%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQ----IAVKRLKV-WSNKAEMEFAVEV 85
KEL + N + D +G G FG V G+L S+ +A+K LKV ++ K +F E
Sbjct: 40 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 86 EILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAI 145
I+ + H N++ L G + + +IV + M N ++ + + +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI---QLVGMLR 154
Query: 146 GSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG--ATHVTTRVK 203
G A G+ YL +HRD+ A N+L++++ +V+DFG ++++ D A + T K
Sbjct: 155 GIASGMKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 204 GTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKP 241
+ + +PE K + + DV+S+GI+L E+ S G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 126
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P T + GTL YL P
Sbjct: 127 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPP 180
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P T + GTL YL P
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TELCGTLDYLPP 175
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 94/212 (44%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQRTATYITELANAL 126
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P + GTL YL P
Sbjct: 127 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLXGTLDYLPP 180
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P T + GTL YL P
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPP 175
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 16/219 (7%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQ----IAVKRLKV-WSNKAEMEFAVEV 85
KEL + N + D +G G FG V G+L S+ +A+K LKV ++ K +F E
Sbjct: 11 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 68
Query: 86 EILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAI 145
I+ + H N++ L G + + +IV + M N ++ + + +
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI---QLVGMLR 125
Query: 146 GSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG--ATHVTTRVK 203
G A G+ YL +HRD+ A N+L++++ +V+DFG ++++ D A + T K
Sbjct: 126 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 182
Query: 204 GTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKP 241
+ + +PE K + + DV+S+GI+L E+ S G++P
Sbjct: 183 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 122
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P T + GTL YL P
Sbjct: 123 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLCGTLDYLPP 176
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 126
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P T + GTL YL P
Sbjct: 127 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLCGTLDYLPP 180
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 124
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P T + GTL YL P
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPP 178
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P T + GTL YL P
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLCGTLDYLPP 175
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 16/219 (7%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQ----IAVKRLKV-WSNKAEMEFAVEV 85
KEL + N + D +G G FG V G+L S+ +A+K LKV ++ K +F E
Sbjct: 40 KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 86 EILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAI 145
I+ + H N++ L G + + +IV + M N ++ + + +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI---QLVGMLR 154
Query: 146 GSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG--ATHVTTRVK 203
G A G+ YL +HRD+ A N+L++++ +V+DFG ++++ D A + T K
Sbjct: 155 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 204 GTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKP 241
+ + +PE K + + DV+S+GI+L E+ S G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 120
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P T + GTL YL P
Sbjct: 121 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPP 174
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 175 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P T + GTL YL P
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TXLCGTLDYLPP 175
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P T + GTL YL P
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLCGTLDYLPP 175
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 125
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P T + GTL YL P
Sbjct: 126 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPP 179
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 36/271 (13%)
Query: 43 DNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGY 102
+ KLG G FG V+ +++AVK +K S E F E ++ ++H L+ L
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAV 245
Query: 103 CAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHI 162
+ + I+ ++M + L + +D + AEG+ ++ +
Sbjct: 246 VTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQR---NY 299
Query: 163 IHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASES 222
IHRD++A+N+L+ A ++ADFG A++ GA K + + APE G +
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLARV---GA-------KFPIKWTAPEAINFGSFTIK 349
Query: 223 CDVYSFGILLLELAS-GKKPIEKV-NSAIKRTITDWALPLACERKFSELADPRLNGNFVE 280
DV+SFGILL+E+ + G+ P + N + R A ER + PR
Sbjct: 350 SDVWSFGILLMEIVTYGRIPYPGMSNPEVIR---------ALERGYRM---PRPEN--CP 395
Query: 281 EELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
EEL ++ + C ++PE+RPT + +L
Sbjct: 396 EELYNIM---MRCWKNRPEERPTFEYIQSVL 423
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFA-------VEVEIL 88
A +F LG+G FG+VY + + + + LKV KA++E A EVEI
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAR--EKQRKFILALKVLF-KAQLEKAGVEHQLRREVEIQ 59
Query: 89 ARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSA 148
+ +RH N+L L GY + ++ +Y P + R A
Sbjct: 60 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 115
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGY 208
+ Y H + +IHRDIK N+LL + + ++ADFG++ P T + GTL Y
Sbjct: 116 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDY 169
Query: 209 LAPEYAMLGKASESCDVYSFGILLLELASGKKPIE 243
L PE E D++S G+L E GK P E
Sbjct: 170 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 123
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++A+FG++ P T + GTL YL P
Sbjct: 124 SYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR---TTLCGTLDYLPP 177
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 93/212 (43%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 122
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P GTL YL P
Sbjct: 123 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC---GTLDYLPP 176
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 39 NFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARVRHK 94
+F+ LG+G FG+VY + I A+K L K KA +E + EVEI + +RH
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 95 NLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYL 154
N+L L GY + ++ +Y P + R A + Y
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR----FDEQRTATYITELANALSYC 128
Query: 155 HHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYA 214
H + +IHRDIK N+LL ++ + ++ADFG++ P T + GTL YL PE
Sbjct: 129 H---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMI 182
Query: 215 MLGKASESCDVYSFGILLLELASGKKPIE 243
E D++S G+L E G P E
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 94/212 (44%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 123
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P + GTL YL P
Sbjct: 124 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLCGTLDYLPP 177
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 149/360 (41%), Gaps = 93/360 (25%)
Query: 16 KEKGKKQPTWRIFSLKELHSAT-----------------NNFNYDNKLGEGGFGSVYWGQ 58
K+K K Q W+I E +S T NN + LG G FG V
Sbjct: 7 KQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEAT 66
Query: 59 LWDGSQ------IAVKRLKVWSNKAEME-FAVEVEILARV-RHKNLLSLRGYCAEGQERL 110
+ + +AVK LK ++ E E E++I++ + +H+N+++L G C G L
Sbjct: 67 AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL 126
Query: 111 IVYDYMPNXXXXXXXXXXXXXEC---LLNWNRR-------------------MDIAIGSA 148
++ +Y C LLN+ RR + + A
Sbjct: 127 VITEYC----------------CYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 170
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGT--- 205
+G+ +L A+ + IHRD+ A NVLL A++ DFG A+ I + + ++ VKG
Sbjct: 171 QGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI---VKGNARL 224
Query: 206 -LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEK--VNSAIKRTITDWALPLA 261
+ ++APE + DV+S+GILL E+ S G P VNS + + D
Sbjct: 225 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDG----- 279
Query: 262 CERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLLKGESKEKLTE 321
++A P K + + C +P RPT ++ L+ +++E E
Sbjct: 280 -----YQMAQPAFAP-------KNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRRE 327
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 94/212 (44%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 147
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P + GTL YL P
Sbjct: 148 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---DDLCGTLDYLPP 201
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 124
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++A+FG++ P T + GTL YL P
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR---TTLCGTLDYLPP 178
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 46 LGEGGFGSVYWGQL-WDGSQ---IAVKRLKV-WSNKAEMEFAVEVEILARVRHKNLLSLR 100
+G G FG V G+L G + +A+K LKV ++ K +F E I+ + H N++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
G + + +IV +YM N ++ + + + G + G+ YL
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVI---QLVGMLRGISAGMKYLSDMG-- 144
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG--ATHVTTRVKGTLGYLAPEYAMLGK 218
+HRD+ A N+L++++ +V+DFG ++++ D A + T K + + APE K
Sbjct: 145 -YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRK 203
Query: 219 ASESCDVYSFGILLLELAS-GKKP 241
+ + DV+S+GI++ E+ S G++P
Sbjct: 204 FTSASDVWSYGIVMWEVVSYGERP 227
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 21/219 (9%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLK---VWSNKAEMEFAVEVEILARV 91
+ +F LG G FG V+ + +G A+K LK V K E +L+ V
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIG---SA 148
H ++ + G + Q+ ++ DY+ LL ++R + +A
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGELF----------SLLRKSQRFPNPVAKFYAA 113
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGY 208
E + L + + II+RD+K N+LLD + ++ DFGFAK +PD VT + GT Y
Sbjct: 114 EVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGTPDY 169
Query: 209 LAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNS 247
+APE ++S D +SFGIL+ E+ +G P N+
Sbjct: 170 IAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT 208
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 94/212 (44%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 124
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P + GTL YL P
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLCGTLDYLPP 178
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 28 FSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEV 85
SL + + +KLG G FG VY G +W +AVK LK + + E EF E
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQFGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEA 58
Query: 86 EILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAI 145
++ ++H NL+ L G C I+ ++M LL++ R +
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN-------------LLDYLRECNRQE 105
Query: 146 GSAEGIVYLHHHATP--------HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATH 197
SA ++Y+ + + IHRD+ A N L+ + +VADFG ++L+
Sbjct: 106 VSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXT 165
Query: 198 VTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
K + + APE K S DV++FG+LL E+A+ G P ++ +
Sbjct: 166 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPS 217
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 93/212 (43%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 124
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P GTL YL P
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC---GTLDYLPP 178
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 128/289 (44%), Gaps = 33/289 (11%)
Query: 34 HSATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVW---SNKAEMEFAVEVEILA 89
++ NF + K+G G F VY L DG +A+K+++++ KA + E+++L
Sbjct: 28 YNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLK 87
Query: 90 RVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLN----WNRRMDIAI 145
++ H N++ E E IV + + L+ W + + +
Sbjct: 88 QLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW--KYFVQL 145
Query: 146 GSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGT 205
SA L H + ++HRDIK +NV + A ++ D G + T + V GT
Sbjct: 146 CSA-----LEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GT 199
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI--EKVNSAIKRTITDWALPLACE 263
Y++PE + D++S G LL E+A+ + P +K+N L C
Sbjct: 200 PYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-----------LYSLC- 247
Query: 264 RKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLLK 312
+K + P L + EEL+++V + C + PEKRP + V D+ K
Sbjct: 248 KKIEQCDYPPLPSDHYSEELRQLVNM---CINPDPEKRPDVTYVYDVAK 293
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 94/212 (44%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P + GTL YL P
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLCGTLDYLPP 175
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 116/269 (43%), Gaps = 40/269 (14%)
Query: 45 KLGEGGFGSVYWGQLWDGSQI-AVKRLKV---WSNKAEMEFAVEVEILARVRHKNLLSLR 100
++G G FG+VY+ + S++ A+K++ SN+ + EV L ++RH N + R
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAI---GSAEGIVYLHHH 157
G +V +Y + ++IA G+ +G+ YLH H
Sbjct: 82 GCYLREHTAWLVMEYCLGSASDLLEVHKKPLQ-------EVEIAAVTHGALQGLAYLHSH 134
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAML- 216
++IHRD+KA N+LL ++ DFG A ++ V GT ++APE +
Sbjct: 135 ---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVILAM 186
Query: 217 --GKASESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERKFSELADPRL 274
G+ DV+S GI +ELA K P+ +N+ ++ ++ P L
Sbjct: 187 DEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------------MSALYHIAQNESPAL 234
Query: 275 NGNFVEEELKRVVLVALTCAHSKPEKRPT 303
E + V +C P+ RPT
Sbjct: 235 QSGHWSEYFRNFV---DSCLQKIPQDRPT 260
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 117/267 (43%), Gaps = 36/267 (13%)
Query: 45 KLGEGGFGSVYWGQLWDGSQI-AVKRLKV---WSNKAEMEFAVEVEILARVRHKNLLSLR 100
++G G FG+VY+ + S++ A+K++ SN+ + EV L ++RH N + R
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 101 G-YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHAT 159
G Y E L++ + + E + + G+ +G+ YLH H
Sbjct: 121 GCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEI-----AAVTHGALQGLAYLHSH-- 173
Query: 160 PHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAML--- 216
++IHRD+KA N+LL ++ DFG A ++ V GT ++APE +
Sbjct: 174 -NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVILAMDE 227
Query: 217 GKASESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNG 276
G+ DV+S GI +ELA K P+ +N+ ++ ++ P L
Sbjct: 228 GQYDGKVDVWSLGITCIELAERKPPLFNMNA------------MSALYHIAQNESPALQS 275
Query: 277 NFVEEELKRVVLVALTCAHSKPEKRPT 303
E + V +C P+ RPT
Sbjct: 276 GHWSEYFRNFV---DSCLQKIPQDRPT 299
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 94/212 (44%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + + I A+K L K KA +E + EVEI + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P GTL YL P
Sbjct: 122 SYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC---GTLDYLPP 175
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 93/212 (43%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P GTL YL P
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC---GTLDYLPP 175
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 93/206 (45%), Gaps = 10/206 (4%)
Query: 44 NKLGEGGFGSVYWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+KLG G +G VY G +W +AVK LK + + E EF E ++ ++H NL+ L G
Sbjct: 38 HKLGGGQYGEVYVG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 95
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
C IV +YMP E M I SA + + +
Sbjct: 96 VCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSA-----MEYLEKKN 150
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASE 221
IHRD+ A N L+ + +VADFG ++L+ K + + APE S
Sbjct: 151 FIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSI 210
Query: 222 SCDVYSFGILLLELAS-GKKPIEKVN 246
DV++FG+LL E+A+ G P ++
Sbjct: 211 KSDVWAFGVLLWEIATYGMSPYPGID 236
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 149/360 (41%), Gaps = 97/360 (26%)
Query: 16 KEKGKKQPTWRIFSLKELHSAT-----------------NNFNYDNKLGEGGFGSVYWGQ 58
K+K K Q W+I E +S T NN + LG G FG V
Sbjct: 7 KQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEAT 66
Query: 59 LWDGSQ------IAVKRLKVWSNKAEME-FAVEVEILARV-RHKNLLSLRGYCAEGQERL 110
+ + +AVK LK ++ E E E++I++ + +H+N+++L G C G L
Sbjct: 67 AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL 126
Query: 111 IVYDYMPNXXXXXXXXXXXXXEC---LLNWNRRMD--------IAIGS------------ 147
++ +Y C LLN+ RR AI +
Sbjct: 127 VITEYC----------------CYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFS 170
Query: 148 ---AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG 204
A+G+ +L A+ + IHRD+ A NVLL A++ DFG A+ I + + ++ VKG
Sbjct: 171 SQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI---VKG 224
Query: 205 T----LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEK--VNSAIKRTITDWA 257
+ ++APE + DV+S+GILL E+ S G P VNS + + D
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDG- 283
Query: 258 LPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLLKGESKE 317
++A P K + + C +P RPT ++ L+ +++E
Sbjct: 284 ---------YQMAQPAFAP-------KNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 45 KLGEGGFGSV---YWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSL 99
+LG+G FGSV + L D G +AVK+L+ + + +F E+EIL ++H N++
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 100 RGYC-AEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+G C + G+ L ++ +Y+P ++ + + +G+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 130
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYAM 215
T IHRD+ N+L++ + + ++ DFG K++P + G + + APE
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLT 190
Query: 216 LGKASESCDVYSFGILLLELAS 237
K S + DV+SFG++L EL +
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 45 KLGEGGFGSV---YWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSL 99
+LG+G FGSV + L D G +AVK+L+ + + +F E+EIL ++H N++
Sbjct: 16 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 100 RGYC-AEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+G C + G+ L ++ +Y+P ++ + + +G+ YL
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 129
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYAM 215
T IHRD+ N+L++ + + ++ DFG K++P + G + + APE
Sbjct: 130 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 189
Query: 216 LGKASESCDVYSFGILLLELAS 237
K S + DV+SFG++L EL +
Sbjct: 190 ESKFSVASDVWSFGVVLYELFT 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 45 KLGEGGFGSV---YWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSL 99
+LG+G FGSV + L D G +AVK+L+ + + +F E+EIL ++H N++
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 100 RGYC-AEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+G C + G+ L ++ +Y+P ++ + + +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 133
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYAM 215
T IHRD+ N+L++ + + ++ DFG K++P + G + + APE
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 216 LGKASESCDVYSFGILLLELAS 237
K S + DV+SFG++L EL +
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 45 KLGEGGFGSV---YWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSL 99
+LG+G FGSV + L D G +AVK+L+ + + +F E+EIL ++H N++
Sbjct: 15 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 100 RGYC-AEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+G C + G+ L ++ +Y+P ++ + + +G+ YL
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 128
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYAM 215
T IHRD+ N+L++ + + ++ DFG K++P + G + + APE
Sbjct: 129 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 188
Query: 216 LGKASESCDVYSFGILLLELAS 237
K S + DV+SFG++L EL +
Sbjct: 189 ESKFSVASDVWSFGVVLYELFT 210
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 149/360 (41%), Gaps = 97/360 (26%)
Query: 16 KEKGKKQPTWRIFSLKELHSAT-----------------NNFNYDNKLGEGGFGSVYWGQ 58
K+K K Q W+I E +S T NN + LG G FG V
Sbjct: 7 KQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEAT 66
Query: 59 LWDGSQ------IAVKRLKVWSNKAEME-FAVEVEILARV-RHKNLLSLRGYCAEGQERL 110
+ + +AVK LK ++ E E E++I++ + +H+N+++L G C G L
Sbjct: 67 AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL 126
Query: 111 IVYDYMPNXXXXXXXXXXXXXEC---LLNWNRRMD--------IAIGS------------ 147
++ +Y C LLN+ RR AI +
Sbjct: 127 VITEYC----------------CYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFS 170
Query: 148 ---AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG 204
A+G+ +L A+ + IHRD+ A NVLL A++ DFG A+ I + + ++ VKG
Sbjct: 171 SQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI---VKG 224
Query: 205 T----LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEK--VNSAIKRTITDWA 257
+ ++APE + DV+S+GILL E+ S G P VNS + + D
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDG- 283
Query: 258 LPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLLKGESKE 317
++A P K + + C +P RPT ++ L+ +++E
Sbjct: 284 ---------YQMAQPAF-------APKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 45 KLGEGGFGSV---YWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSL 99
+LG+G FGSV + L D G +AVK+L+ + + +F E+EIL ++H N++
Sbjct: 21 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 100 RGYC-AEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+G C + G+ L ++ +Y+P ++ + + +G+ YL
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 134
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYAM 215
T IHRD+ N+L++ + + ++ DFG K++P + G + + APE
Sbjct: 135 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 194
Query: 216 LGKASESCDVYSFGILLLELAS 237
K S + DV+SFG++L EL +
Sbjct: 195 ESKFSVASDVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 45 KLGEGGFGSV---YWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSL 99
+LG+G FGSV + L D G +AVK+L+ + + +F E+EIL ++H N++
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 100 RGYC-AEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+G C + G+ L ++ +Y+P ++ + + +G+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 130
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYAM 215
T IHRD+ N+L++ + + ++ DFG K++P + G + + APE
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 216 LGKASESCDVYSFGILLLELAS 237
K S + DV+SFG++L EL +
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 45 KLGEGGFGSV---YWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSL 99
+LG+G FGSV + L D G +AVK+L+ + + +F E+EIL ++H N++
Sbjct: 22 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 100 RGYC-AEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+G C + G+ L ++ +Y+P ++ + + +G+ YL
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 135
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYAM 215
T IHRD+ N+L++ + + ++ DFG K++P + G + + APE
Sbjct: 136 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 195
Query: 216 LGKASESCDVYSFGILLLELAS 237
K S + DV+SFG++L EL +
Sbjct: 196 ESKFSVASDVWSFGVVLYELFT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 45 KLGEGGFGSV---YWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSL 99
+LG+G FGSV + L D G +AVK+L+ + + +F E+EIL ++H N++
Sbjct: 24 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 100 RGYC-AEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+G C + G+ L ++ +Y+P ++ + + +G+ YL
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 137
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYAM 215
T IHRD+ N+L++ + + ++ DFG K++P + G + + APE
Sbjct: 138 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 197
Query: 216 LGKASESCDVYSFGILLLELAS 237
K S + DV+SFG++L EL +
Sbjct: 198 ESKFSVASDVWSFGVVLYELFT 219
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 94/212 (44%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARV 91
A +F LG+G FG+VY + I A+K L K KA +E + EVEI + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L L GY + ++ +Y P + R A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 124
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H + +IHRDIK N+LL + + ++ADFG++ P + GTL YL P
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---DDLCGTLDYLPP 178
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++S G+L E GK P E
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 45 KLGEGGFGSV---YWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSL 99
+LG+G FGSV + L D G +AVK+L+ + + +F E+EIL ++H N++
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 100 RGYC-AEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+G C + G+ L ++ +Y+P ++ + + +G+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 130
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYAM 215
T IHRD+ N+L++ + + ++ DFG K++P + G + + APE
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 216 LGKASESCDVYSFGILLLELAS 237
K S + DV+SFG++L EL +
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 39 NFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL-KVWSNKAEMEFAV--EVEILARVRHK 94
+F+ LG+G FG+VY + I A+K L K KA +E + EVEI + +RH
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 95 NLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYL 154
N+L L GY + ++ +Y P + R A + Y
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR----FDEQRTATYITELANALSYC 128
Query: 155 HHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYA 214
H + +IHRDIK N+LL ++ + ++ADFG++ P GTL YL PE
Sbjct: 129 H---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC---GTLDYLPPEMI 182
Query: 215 MLGKASESCDVYSFGILLLELASGKKPIE 243
E D++S G+L E G P E
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 45 KLGEGGFGSV---YWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSL 99
+LG+G FGSV + L D G +AVK+L+ + + +F E+EIL ++H N++
Sbjct: 23 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 100 RGYC-AEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+G C + G+ L ++ +Y+P ++ + + +G+ YL
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 136
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYAM 215
T IHRD+ N+L++ + + ++ DFG K++P + G + + APE
Sbjct: 137 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 196
Query: 216 LGKASESCDVYSFGILLLELAS 237
K S + DV+SFG++L EL +
Sbjct: 197 ESKFSVASDVWSFGVVLYELFT 218
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 45 KLGEGGFGSV---YWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSL 99
+LG+G FGSV + L D G +AVK+L+ + + +F E+EIL ++H N++
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 100 RGYC-AEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+G C + G+ L ++ +Y+P ++ + + +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER---IDHIKLLQYTSQICKGMEYL--- 133
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYAM 215
T IHRD+ N+L++ + + ++ DFG K++P + G + + APE
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 216 LGKASESCDVYSFGILLLELAS 237
K S + DV+SFG++L EL +
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 26/231 (11%)
Query: 29 SLKELHSATNNFNYDNKLGEGGFGSVYWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVE 86
SL + + +KLG G +G VY G +W +AVK LK + + E EF E
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 59
Query: 87 ILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIG 146
++ ++H NL+ L G C I+ ++M LL++ R +
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGN-------------LLDYLRECNRQEV 106
Query: 147 SAEGIVYLHHHATP--------HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHV 198
SA ++Y+ + + IHRD+ A N L+ + +VADFG ++L+
Sbjct: 107 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA 166
Query: 199 TTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
K + + APE K S DV++FG+LL E+A+ G P ++ +
Sbjct: 167 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPS 217
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 45 KLGEGGFGSV---YWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSL 99
+LG+G FGSV + L D G +AVK+L+ + + +F E+EIL ++H N++
Sbjct: 48 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 100 RGYC-AEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+G C + G+ L ++ +Y+P ++ + + +G+ YL
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 161
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYAM 215
T IHRD+ N+L++ + + ++ DFG K++P + G + + APE
Sbjct: 162 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 221
Query: 216 LGKASESCDVYSFGILLLELAS 237
K S + DV+SFG++L EL +
Sbjct: 222 ESKFSVASDVWSFGVVLYELFT 243
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 45 KLGEGGFGSV---YWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSL 99
+LG+G FGSV + L D G +AVK+L+ + + +F E+EIL ++H N++
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 100 RGYC-AEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+G C + G+ L ++ +Y+P ++ + + +G+ YL
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 148
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYAM 215
T IHRD+ N+L++ + + ++ DFG K++P + G + + APE
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 216 LGKASESCDVYSFGILLLELAS 237
K S + DV+SFG++L EL +
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 27/208 (12%)
Query: 45 KLGEGGFGSV---YWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSL 99
+LG+G FGSV + L D G +AVK+L+ + + +F E+EIL ++H N++
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 100 RGYC-AEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD------IAIGSAEGI 151
+G C + G+ L ++ +++P E L R+D +G+
Sbjct: 80 KGVCYSAGRRNLKLIMEFLP---------YGSLREYLQKHKERIDHIKLLQYTSQICKGM 130
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYL 209
YL T IHRD+ N+L++ + + ++ DFG K++P + G + +
Sbjct: 131 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 210 APEYAMLGKASESCDVYSFGILLLELAS 237
APE K S + DV+SFG++L EL +
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 29/214 (13%)
Query: 38 NNFNYDNKLGEGGFGSV---YWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVR 92
+ Y ++LG+G FGSV + L D G+ +AVK+L+ + +F E++IL +
Sbjct: 10 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 69
Query: 93 HKNLLSLRG--YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEG 150
++ RG Y Q +V +Y+P+ CL ++ +R + ++
Sbjct: 70 SDFIVKYRGVSYGPGRQSLRLVMEYLPSG-------------CLRDFLQRHRARLDASRL 116
Query: 151 IVY-------LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVK 203
++Y + + + +HRD+ A N+L++++ ++ADFG AKL+P + R
Sbjct: 117 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREP 176
Query: 204 G--TLGYLAPEYAMLGKASESCDVYSFGILLLEL 235
G + + APE S DV+SFG++L EL
Sbjct: 177 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 210
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 28 FSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEV 85
SL + + +KLG G +G VY G +W +AVK LK + + E EF E
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEA 58
Query: 86 EILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAI 145
++ ++H NL+ L G C I+ ++M LL++ R +
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN-------------LLDYLRECNRQE 105
Query: 146 GSAEGIVYLHHHATP--------HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATH 197
SA ++Y+ + + IHRD+ A N L+ + +VADFG ++L+
Sbjct: 106 VSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFT 165
Query: 198 VTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
K + + APE K S DV++FG+LL E+A+ G P ++ +
Sbjct: 166 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPS 217
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 45 KLGEGGFGSV---YWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSL 99
+LG+G FGSV + L D G +AVK+L+ + + +F E+EIL ++H N++
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 100 RGYC-AEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+G C + G+ L ++ +Y+P ++ + + +G+ YL
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 148
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYAM 215
T IHRD+ N+L++ + + ++ DFG K++P + G + + APE
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 216 LGKASESCDVYSFGILLLELAS 237
K S + DV+SFG++L EL +
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 45 KLGEGGFGSV---YWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSL 99
+LG+G FGSV + L D G +AVK+L+ + + +F E+EIL ++H N++
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 100 RGYC-AEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+G C + G+ L ++ +Y+P ++ + + +G+ YL
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 131
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYAM 215
T IHR++ N+L++ + + ++ DFG K++P + + G + + APE
Sbjct: 132 GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT 191
Query: 216 LGKASESCDVYSFGILLLELAS 237
K S + DV+SFG++L EL +
Sbjct: 192 ESKFSVASDVWSFGVVLYELFT 213
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 46 LGEGGFGSVYWGQLWD------GSQIAVKRLKVWSNKAEM-EFAVEVEILARVRHKNLLS 98
LGEG FG V + +D G Q+AVK LK S + + E+EIL + H+N++
Sbjct: 29 LGEGHFGKVELCR-YDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK 87
Query: 99 LRGYCAE--GQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+G C E G ++ +++P+ +N +++ A+ +G+ YL
Sbjct: 88 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQLKYAVQICKGMDYL-- 142
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTR--VKGTLGYLAPEYA 214
+ +HRD+ A NVL++++ + ++ DFG K I T + + + APE
Sbjct: 143 -GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 201
Query: 215 MLGKASESCDVYSFGILLLELAS 237
M K + DV+SFG+ L EL +
Sbjct: 202 MQSKFYIASDVWSFGVTLHELLT 224
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 149/366 (40%), Gaps = 99/366 (27%)
Query: 16 KEKGKKQPTWRIFSLKELHSAT-----------------NNFNYDNKLGEGGFGSVYWGQ 58
K+K K Q W+I E +S T NN + LG G FG V
Sbjct: 7 KQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEAT 66
Query: 59 LWDGSQ------IAVKRLKVWSNKAEME-FAVEVEILARV-RHKNLLSLRGYCAEGQERL 110
+ + +AVK LK ++ E E E++I++ + +H+N+++L G C G L
Sbjct: 67 AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL 126
Query: 111 IVYDYMPNXXXXXXXXXXXXXEC---LLNWNRR-------------------------MD 142
++ +Y C LLN+ RR +
Sbjct: 127 VITEYC----------------CYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLH 170
Query: 143 IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRV 202
+ A+G+ +L A+ + IHRD+ A NVLL A++ DFG A+ I + + ++ V
Sbjct: 171 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI---V 224
Query: 203 KGT----LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEK--VNSAIKRTITD 255
KG + ++APE + DV+S+GILL E+ S G P VNS + + D
Sbjct: 225 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD 284
Query: 256 WALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLLKGES 315
++A P K + + C +P RPT ++ L+ ++
Sbjct: 285 G----------YQMAQPAF-------APKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 327
Query: 316 KEKLTE 321
+E E
Sbjct: 328 QEDRRE 333
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 46 LGEGGFGSVYWGQLWD------GSQIAVKRLKVWSNKAEM-EFAVEVEILARVRHKNLLS 98
LGEG FG V + +D G Q+AVK LK S + + E+EIL + H+N++
Sbjct: 17 LGEGHFGKVELCR-YDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK 75
Query: 99 LRGYCAE--GQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+G C E G ++ +++P+ +N +++ A+ +G+ YL
Sbjct: 76 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQLKYAVQICKGMDYL-- 130
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTR--VKGTLGYLAPEYA 214
+ +HRD+ A NVL++++ + ++ DFG K I T + + + APE
Sbjct: 131 -GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 189
Query: 215 MLGKASESCDVYSFGILLLELAS 237
M K + DV+SFG+ L EL +
Sbjct: 190 MQSKFYIASDVWSFGVTLHELLT 212
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 146/354 (41%), Gaps = 93/354 (26%)
Query: 18 KGKKQPTWRIFSLKELHSAT-----------------NNFNYDNKLGEGGFGSVYWGQLW 60
K K Q W+I E +S T NN + LG G FG V +
Sbjct: 1 KPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAF 60
Query: 61 DGSQ------IAVKRLKVWSNKAEME-FAVEVEILARV-RHKNLLSLRGYCAEGQERLIV 112
+ +AVK LK ++ E E E++I++ + +H+N+++L G C G L++
Sbjct: 61 GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVI 120
Query: 113 YDYMPNXXXXXXXXXXXXXEC---LLNWNRR-------------------MDIAIGSAEG 150
+Y C LLN+ RR + + A+G
Sbjct: 121 TEYC----------------CYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 164
Query: 151 IVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGT----L 206
+ +L A+ + IHRD+ A NVLL A++ DFG A+ I + + ++ VKG +
Sbjct: 165 MAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI---VKGNARLPV 218
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEK--VNSAIKRTITDWALPLACE 263
++APE + DV+S+GILL E+ S G P VNS + + D
Sbjct: 219 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDG------- 271
Query: 264 RKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLLKGESKE 317
++A P K + + C +P RPT ++ L+ +++E
Sbjct: 272 ---YQMAQPAFAP-------KNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 315
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 29/214 (13%)
Query: 38 NNFNYDNKLGEGGFGSV---YWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVR 92
+ Y ++LG+G FGSV + L D G+ +AVK+L+ + +F E++IL +
Sbjct: 11 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 70
Query: 93 HKNLLSLRG--YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEG 150
++ RG Y Q +V +Y+P+ CL ++ +R + ++
Sbjct: 71 SDFIVKYRGVSYGPGRQSLRLVMEYLPSG-------------CLRDFLQRHRARLDASRL 117
Query: 151 IVY-------LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVK 203
++Y + + + +HRD+ A N+L++++ ++ADFG AKL+P + R
Sbjct: 118 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREP 177
Query: 204 G--TLGYLAPEYAMLGKASESCDVYSFGILLLEL 235
G + + APE S DV+SFG++L EL
Sbjct: 178 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 211
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 101/222 (45%), Gaps = 24/222 (10%)
Query: 46 LGEGGFGSVYWGQLWD------GSQIAVKRLKVWSN-KAEMEFAVEVEILARVRHKNLLS 98
LGEG FG V +D G +AVK LK + + E+EIL + H++++
Sbjct: 17 LGEGHFGKVSL-YCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 75
Query: 99 LRGYCAEGQERLI--VYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+G C + E+ + V +Y+P C+ + + A EG+ YLH
Sbjct: 76 YKGCCEDQGEKSVQLVMEYVP----LGSLRDYLPRHCV-GLAQLLLFAQQICEGMAYLH- 129
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYA 214
H IHR + A NVLLD D ++ DFG AK +P+G + R G + + APE
Sbjct: 130 --AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 187
Query: 215 MLGKASESCDVYSFGILLLELA----SGKKPIEKVNSAIKRT 252
K + DV+SFG+ L EL S + P K I T
Sbjct: 188 KECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHT 229
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 29/214 (13%)
Query: 38 NNFNYDNKLGEGGFGSV---YWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVR 92
+ Y ++LG+G FGSV + L D G+ +AVK+L+ + +F E++IL +
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 82
Query: 93 HKNLLSLRG--YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEG 150
++ RG Y Q +V +Y+P+ CL ++ +R + ++
Sbjct: 83 SDFIVKYRGVSYGPGRQSLRLVMEYLPSG-------------CLRDFLQRHRARLDASRL 129
Query: 151 IVY-------LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVK 203
++Y + + + +HRD+ A N+L++++ ++ADFG AKL+P + R
Sbjct: 130 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREP 189
Query: 204 G--TLGYLAPEYAMLGKASESCDVYSFGILLLEL 235
G + + APE S DV+SFG++L EL
Sbjct: 190 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 223
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 104/204 (50%), Gaps = 14/204 (6%)
Query: 46 LGEGGFGSVYWGQLWDGSQ----IAVKRLKV-WSNKAEMEFAVEVEILARVRHKNLLSLR 100
+G G FG V G+L + +A+K LK +++K +F E I+ + H N++ L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
G + + +I+ +YM N ++ + + + G G+ YL +
Sbjct: 97 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGMLRGIGSGMKYLSDMSA- 152
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG--ATHVTTRVKGTLGYLAPEYAMLGK 218
+HRD+ A N+L++++ +V+DFG ++++ D A + T K + + APE K
Sbjct: 153 --VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 210
Query: 219 ASESCDVYSFGILLLELAS-GKKP 241
+ + DV+S+GI++ E+ S G++P
Sbjct: 211 FTSASDVWSYGIVMWEVMSYGERP 234
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 101/222 (45%), Gaps = 24/222 (10%)
Query: 46 LGEGGFGSVYWGQLWD------GSQIAVKRLKVWSN-KAEMEFAVEVEILARVRHKNLLS 98
LGEG FG V +D G +AVK LK + + E+EIL + H++++
Sbjct: 16 LGEGHFGKVSL-YCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 74
Query: 99 LRGYCAEGQERLI--VYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+G C + E+ + V +Y+P C+ + + A EG+ YLH
Sbjct: 75 YKGCCEDQGEKSVQLVMEYVP----LGSLRDYLPRHCV-GLAQLLLFAQQICEGMAYLH- 128
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYA 214
H IHR + A NVLLD D ++ DFG AK +P+G + R G + + APE
Sbjct: 129 --AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 186
Query: 215 MLGKASESCDVYSFGILLLELA----SGKKPIEKVNSAIKRT 252
K + DV+SFG+ L EL S + P K I T
Sbjct: 187 KECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHT 228
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 36/211 (17%)
Query: 46 LGEGGFGSVYWGQLWD------GSQIAVKRLKV-WSNKAEMEFAVEVEILARVRHKNLLS 98
LGEG FG V +D G +AVK LK + + E++IL + H++++
Sbjct: 22 LGEGHFGKVSL-YCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 99 LRGYCA-EGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS--------A 148
+G C +G++ L +V +Y+P L ++ R I +
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGS-------------LRDYLPRHSIGLAQLLLFAQQIC 127
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TL 206
EG+ YLH + H IHR++ A NVLLD D ++ DFG AK +P+G + R G +
Sbjct: 128 EGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 184
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELAS 237
+ APE K + DV+SFG+ L EL +
Sbjct: 185 FWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 44 NKLGEGGFGSVYWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+KLG G +G VY G +W +AVK LK + + E EF E ++ ++H NL+ L G
Sbjct: 20 HKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 77
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
C I+ ++M E +N + +A + + YL +
Sbjct: 78 VCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---N 132
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASE 221
IHRD+ A N L+ + +VADFG ++L+ K + + APE K S
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSI 192
Query: 222 SCDVYSFGILLLELAS-GKKPIEKVN 246
DV++FG+LL E+A+ G P ++
Sbjct: 193 KSDVWAFGVLLWEIATYGMSPYPGID 218
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 26/214 (12%)
Query: 44 NKLGEGGFGSVYWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+KLG G +G VY G +W +AVK LK + + E EF E ++ ++H NL+ L G
Sbjct: 19 HKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 76
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP- 160
C I+ ++M LL++ R + SA ++Y+ +
Sbjct: 77 VCTREPPFYIITEFMTYGN-------------LLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 161 -------HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEY 213
+ IHRD+ A N L+ + +VADFG ++L+ K + + APE
Sbjct: 124 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 183
Query: 214 AMLGKASESCDVYSFGILLLELAS-GKKPIEKVN 246
K S DV++FG+LL E+A+ G P ++
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 26/214 (12%)
Query: 44 NKLGEGGFGSVYWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+KLG G +G VY G +W +AVK LK + + E EF E ++ ++H NL+ L G
Sbjct: 19 HKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 76
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP- 160
C I+ ++M LL++ R + SA ++Y+ +
Sbjct: 77 VCTREPPFYIIIEFMTYGN-------------LLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 161 -------HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEY 213
+ IHRD+ A N L+ + +VADFG ++L+ K + + APE
Sbjct: 124 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 183
Query: 214 AMLGKASESCDVYSFGILLLELAS-GKKPIEKVN 246
K S DV++FG+LL E+A+ G P ++
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 44 NKLGEGGFGSVYWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+KLG G +G VY G +W +AVK LK + + E EF E ++ ++H NL+ L G
Sbjct: 21 HKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 78
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
C I+ ++M E +N + +A + + YL +
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---N 133
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASE 221
IHRD+ A N L+ + +VADFG ++L+ K + + APE K S
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSI 193
Query: 222 SCDVYSFGILLLELAS-GKKPIEKVN 246
DV++FG+LL E+A+ G P ++
Sbjct: 194 KSDVWAFGVLLWEIATYGMSPYPGID 219
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 26/214 (12%)
Query: 44 NKLGEGGFGSVYWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+KLG G +G VY G +W +AVK LK + + E EF E ++ ++H NL+ L G
Sbjct: 24 HKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 81
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP- 160
C I+ ++M LL++ R + SA ++Y+ +
Sbjct: 82 VCTREPPFYIITEFMTYGN-------------LLDYLRECNRQEVSAVVLLYMATQISSA 128
Query: 161 -------HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEY 213
+ IHRD+ A N L+ + +VADFG ++L+ K + + APE
Sbjct: 129 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 188
Query: 214 AMLGKASESCDVYSFGILLLELAS-GKKPIEKVN 246
K S DV++FG+LL E+A+ G P ++
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 222
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 26/214 (12%)
Query: 44 NKLGEGGFGSVYWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+KLG G +G VY G +W +AVK LK + + E EF E ++ ++H NL+ L G
Sbjct: 19 HKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 76
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP- 160
C I+ ++M LL++ R + SA ++Y+ +
Sbjct: 77 VCTREPPFYIIIEFMTYGN-------------LLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 161 -------HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEY 213
+ IHRD+ A N L+ + +VADFG ++L+ K + + APE
Sbjct: 124 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 183
Query: 214 AMLGKASESCDVYSFGILLLELAS-GKKPIEKVN 246
K S DV++FG+LL E+A+ G P ++
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 26/214 (12%)
Query: 44 NKLGEGGFGSVYWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+KLG G +G VY G +W +AVK LK + + E EF E ++ ++H NL+ L G
Sbjct: 19 HKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 76
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP- 160
C I+ ++M LL++ R + SA ++Y+ +
Sbjct: 77 VCTREPPFYIITEFMTYGN-------------LLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 161 -------HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEY 213
+ IHRD+ A N L+ + +VADFG ++L+ K + + APE
Sbjct: 124 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 183
Query: 214 AMLGKASESCDVYSFGILLLELAS-GKKPIEKVN 246
K S DV++FG+LL E+A+ G P ++
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 44 NKLGEGGFGSVYWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+KLG G +G VY G +W +AVK LK + + E EF E ++ ++H NL+ L G
Sbjct: 20 HKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 77
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
C I+ ++M E +N + +A + + YL +
Sbjct: 78 VCTREPPFYIIIEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---N 132
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASE 221
IHRD+ A N L+ + +VADFG ++L+ K + + APE K S
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 192
Query: 222 SCDVYSFGILLLELAS-GKKPIEKVN 246
DV++FG+LL E+A+ G P ++
Sbjct: 193 KSDVWAFGVLLWEIATYGMSPYPGID 218
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 36/211 (17%)
Query: 46 LGEGGFGSVYWGQLWD------GSQIAVKRLKV-WSNKAEMEFAVEVEILARVRHKNLLS 98
LGEG FG V +D G +AVK LK + + E++IL + H++++
Sbjct: 22 LGEGHFGKVSL-YCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 99 LRGYCA-EGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS--------A 148
+G C +G++ L +V +Y+P L ++ R I +
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGS-------------LRDYLPRHSIGLAQLLLFAQQIC 127
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TL 206
EG+ YLH H IHR++ A NVLLD D ++ DFG AK +P+G + R G +
Sbjct: 128 EGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 184
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELAS 237
+ APE K + DV+SFG+ L EL +
Sbjct: 185 FWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 22/206 (10%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCAE 105
+G+G FG V G + G+++AVK +K ++ F E ++ ++RH NL+ L G E
Sbjct: 201 IGKGEFGDVMLGD-YRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 106 GQERL-IVYDYMPNXXXXXXXXXXXXX----ECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
+ L IV +YM +CLL ++ +D+ E + YL +
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS--LDVC----EAMEYLEGN--- 308
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKAS 220
+ +HRD+ A NVL+ D A+V+DFG K A+ K + + APE K S
Sbjct: 309 NFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFS 364
Query: 221 ESCDVYSFGILLLELAS-GKKPIEKV 245
DV+SFGILL E+ S G+ P ++
Sbjct: 365 TKSDVWSFGILLWEIYSFGRVPYPRI 390
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 22/206 (10%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCAE 105
+G+G FG V G + G+++AVK +K ++ F E ++ ++RH NL+ L G E
Sbjct: 14 IGKGEFGDVMLGD-YRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 106 GQERL-IVYDYMPNXXXX----XXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
+ L IV +YM +CLL ++ +D+ E + YL +
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS--LDVC----EAMEYLEGN--- 121
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKAS 220
+ +HRD+ A NVL+ D A+V+DFG K A+ K + + APE K S
Sbjct: 122 NFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFS 177
Query: 221 ESCDVYSFGILLLELAS-GKKPIEKV 245
DV+SFGILL E+ S G+ P ++
Sbjct: 178 TKSDVWSFGILLWEIYSFGRVPYPRI 203
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 104/204 (50%), Gaps = 14/204 (6%)
Query: 46 LGEGGFGSVYWGQLWDGSQ----IAVKRLKV-WSNKAEMEFAVEVEILARVRHKNLLSLR 100
+G G FG V G+L + +A+K LK +++K +F E I+ + H N++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
G + + +I+ +YM N ++ + + + G G+ YL +
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGMLRGIGSGMKYLSDMSY- 137
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG--ATHVTTRVKGTLGYLAPEYAMLGK 218
+HRD+ A N+L++++ +V+DFG ++++ D A + T K + + APE K
Sbjct: 138 --VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 195
Query: 219 ASESCDVYSFGILLLELAS-GKKP 241
+ + DV+S+GI++ E+ S G++P
Sbjct: 196 FTSASDVWSYGIVMWEVMSYGERP 219
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 22/206 (10%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCAE 105
+G+G FG V G + G+++AVK +K ++ F E ++ ++RH NL+ L G E
Sbjct: 29 IGKGEFGDVMLGD-YRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 106 GQERL-IVYDYMPNXXXX----XXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
+ L IV +YM +CLL ++ +D+ E + YL +
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS--LDVC----EAMEYLEGN--- 136
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKAS 220
+ +HRD+ A NVL+ D A+V+DFG K A+ K + + APE K S
Sbjct: 137 NFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFS 192
Query: 221 ESCDVYSFGILLLELAS-GKKPIEKV 245
DV+SFGILL E+ S G+ P ++
Sbjct: 193 TKSDVWSFGILLWEIYSFGRVPYPRI 218
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 104/251 (41%), Gaps = 17/251 (6%)
Query: 34 HSATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL---KVWSNKAEMEFAVEVEILA 89
H ++F LG+G FG+VY + I A+K L ++ E + E+EI A
Sbjct: 19 HFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQA 78
Query: 90 RVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE 149
+ H N+L L Y + + ++ +Y P C + R I A+
Sbjct: 79 HLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQK----SCTFDEQRTATIMEELAD 134
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYL 209
++Y H +IHRDIK N+LL + ++ADFG++ P GTL YL
Sbjct: 135 ALMYCHGKK---VIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC---GTLDYL 188
Query: 210 APEYAMLGKASESCDVYSFGILLLELASGKKPIEKV--NSAIKRTI-TDWALPLACERKF 266
PE +E D++ G+L EL G P E N +R + D P +
Sbjct: 189 PPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGA 248
Query: 267 SELADPRLNGN 277
+L L N
Sbjct: 249 QDLISKLLRHN 259
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 44 NKLGEGGFGSVYWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+KLG G +G VY G +W +AVK LK + + E EF E ++ ++H NL+ L G
Sbjct: 24 HKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 81
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
C I+ ++M E +N + +A + + YL +
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---N 136
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASE 221
IHRD+ A N L+ + +VADFG ++L+ K + + APE K S
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 222 SCDVYSFGILLLELAS-GKKPIEKVN 246
DV++FG+LL E+A+ G P ++
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPYPGID 222
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 10/206 (4%)
Query: 44 NKLGEGGFGSVYWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+KLG G +G VY G +W +AVK LK + + E EF E ++ ++H NL+ L G
Sbjct: 21 HKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 78
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
C I+ ++M E M I SA + + +
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKN 133
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASE 221
IHRD+ A N L+ + +VADFG ++L+ K + + APE K S
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 222 SCDVYSFGILLLELAS-GKKPIEKVN 246
DV++FG+LL E+A+ G P ++
Sbjct: 194 KSDVWAFGVLLWEIATYGMSPYPGID 219
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 44 NKLGEGGFGSVYWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+KLG G +G VY G +W +AVK LK + + E EF E ++ ++H NL+ L G
Sbjct: 24 HKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 81
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
C I+ ++M E +N + +A + + YL +
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---N 136
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASE 221
IHRD+ A N L+ + +VADFG ++L+ K + + APE K S
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 222 SCDVYSFGILLLELAS-GKKPIEKVN 246
DV++FG+LL E+A+ G P ++
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPYPGID 222
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 44 NKLGEGGFGSVYWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+KLG G +G VY G +W +AVK LK + + E EF E ++ ++H NL+ L G
Sbjct: 24 HKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 81
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
C I+ ++M E +N + +A + + YL +
Sbjct: 82 VCTREPPFYIIIEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---N 136
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASE 221
IHRD+ A N L+ + +VADFG ++L+ K + + APE K S
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 222 SCDVYSFGILLLELAS-GKKPIEKVN 246
DV++FG+LL E+A+ G P ++
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPYPGID 222
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 10/206 (4%)
Query: 44 NKLGEGGFGSVYWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+KLG G +G VY G +W +AVK LK + + E EF E ++ ++H NL+ L G
Sbjct: 21 HKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 78
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
C I+ ++M E M I SA + + +
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKN 133
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASE 221
IHRD+ A N L+ + +VADFG ++L+ K + + APE K S
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 222 SCDVYSFGILLLELAS-GKKPIEKVN 246
DV++FG+LL E+A+ G P ++
Sbjct: 194 KSDVWAFGVLLWEIATYGMSPYPGID 219
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 10/206 (4%)
Query: 44 NKLGEGGFGSVYWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+KLG G +G VY G +W +AVK LK + + E EF E ++ ++H NL+ L G
Sbjct: 32 HKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 89
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
C I+ ++M E M I SA + + +
Sbjct: 90 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKN 144
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASE 221
IHRD+ A N L+ + +VADFG ++L+ K + + APE K S
Sbjct: 145 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 204
Query: 222 SCDVYSFGILLLELAS-GKKPIEKVN 246
DV++FG+LL E+A+ G P ++
Sbjct: 205 KSDVWAFGVLLWEIATYGMSPYPGID 230
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 29/214 (13%)
Query: 38 NNFNYDNKLGEGGFGSV---YWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVR 92
+ Y ++LG+G FGSV + L D G+ +AVK+L+ + +F E++IL +
Sbjct: 7 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 66
Query: 93 HKNLLSLRG--YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEG 150
++ RG Y E +V +Y+P+ CL ++ +R + ++
Sbjct: 67 SDFIVKYRGVSYGPGRPELRLVMEYLPSG-------------CLRDFLQRHRARLDASRL 113
Query: 151 IVY-------LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVK 203
++Y + + + +HRD+ A N+L++++ ++ADFG AKL+P R
Sbjct: 114 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREP 173
Query: 204 G--TLGYLAPEYAMLGKASESCDVYSFGILLLEL 235
G + + APE S DV+SFG++L EL
Sbjct: 174 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 207
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 44 NKLGEGGFGSVYWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+KLG G +G VY G +W +AVK LK + + E EF E ++ ++H NL+ L G
Sbjct: 24 HKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 81
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
C I+ ++M E +N + +A + + YL +
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---N 136
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASE 221
IHRD+ A N L+ + +VADFG ++L+ K + + APE K S
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 222 SCDVYSFGILLLELAS-GKKPIEKVN 246
DV++FG+LL E+A+ G P ++
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPYPGID 222
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 104/204 (50%), Gaps = 14/204 (6%)
Query: 46 LGEGGFGSVYWGQLWDGSQ----IAVKRLKV-WSNKAEMEFAVEVEILARVRHKNLLSLR 100
+G G FG V G+L + +A+K LK +++K +F E I+ + H N++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
G + + +I+ +YM N ++ + + + G G+ YL +
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGMLRGIGSGMKYLSDMSY- 131
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG--ATHVTTRVKGTLGYLAPEYAMLGK 218
+HRD+ A N+L++++ +V+DFG ++++ D A + T K + + APE K
Sbjct: 132 --VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 189
Query: 219 ASESCDVYSFGILLLELAS-GKKP 241
+ + DV+S+GI++ E+ S G++P
Sbjct: 190 FTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 44 NKLGEGGFGSVYWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+KLG G +G VY G +W +AVK LK + + E EF E ++ ++H NL+ L G
Sbjct: 23 HKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 80
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
C I+ ++M E +N + +A + + YL +
Sbjct: 81 VCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---N 135
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASE 221
IHRD+ A N L+ + +VADFG ++L+ K + + APE K S
Sbjct: 136 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 195
Query: 222 SCDVYSFGILLLELAS-GKKPIEKVN 246
DV++FG+LL E+A+ G P ++
Sbjct: 196 KSDVWAFGVLLWEIATYGMSPYPGID 221
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 44 NKLGEGGFGSVYWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+KLG G +G VY G +W +AVK LK + + E EF E ++ ++H NL+ L G
Sbjct: 19 HKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 76
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
C I+ ++M E +N + +A + + YL +
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---N 131
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASE 221
IHRD+ A N L+ + +VADFG ++L+ K + + APE K S
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 222 SCDVYSFGILLLELAS-GKKPIEKVN 246
DV++FG+LL E+A+ G P ++
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPYPGID 217
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 148/339 (43%), Gaps = 54/339 (15%)
Query: 19 GKKQPTWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLW-DGSQI--AVKRLKVWSN 75
GK P I+ + + N+ + + +GEG FG V ++ DG ++ A+KR+K +++
Sbjct: 10 GKNNPDPTIYPVLDW----NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS 65
Query: 76 KAE-MEFAVEVEILARV-RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXEC 133
K + +FA E+E+L ++ H N+++L G C + +Y P+ E
Sbjct: 66 KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLET 125
Query: 134 ------------LLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQ 181
L+ + + A A G+ YL + IHRD+ A N+L+ ++ A+
Sbjct: 126 DPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAK 182
Query: 182 VADFGFAKLIPDGATHVTTRVKGTLG--YLAPEYAMLGKASESCDVYSFGILLLELAS-G 238
+ADFG ++ G + G L ++A E + + DV+S+G+LL E+ S G
Sbjct: 183 IADFGLSR----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG 238
Query: 239 KKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEELK---RVVLVALTCAH 295
P C +EL + G +E+ L V + C
Sbjct: 239 GTPY-------------------CGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWR 279
Query: 296 SKPEKRPTMLEVLDLLKGESKEKLTELENDELFKSHQVA 334
KP +RP+ ++L L +E+ T + N L++ A
Sbjct: 280 EKPYERPSFAQILVSLNRMLEERKTYV-NTTLYEKFTYA 317
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 135/299 (45%), Gaps = 46/299 (15%)
Query: 45 KLGEGGFGSVYWGQLWD------GSQIAVKRL-KVWSNKAEMEFAVEVEILARVRHKNLL 97
+LG+G FG VY G D +++AVK + + S + +EF E ++ +++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 98 SLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNR-------RMDIAIGSAEG 150
L G ++GQ L+V + M + E N R + +A A+G
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRP-EAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 151 IVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLG--Y 208
+ YL+ +HRD+ A N ++ DF ++ DFG + I + A + KG L +
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETA-YYRKGGKGLLPVRW 198
Query: 209 LAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV-NSAIKRTITDWALPLACERKF 266
+APE G + S D++SFG++L E+ S ++P + + N + + + D
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD----------- 247
Query: 267 SELADPRLNGNFVEEE---LKRVVLVALTCAHSKPEKRPTMLEVLDLLKGESKEKLTEL 322
G ++++ +RV + C P+ RPT LE+++LLK + E+
Sbjct: 248 ---------GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 297
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 44 NKLGEGGFGSVYWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+KLG G +G VY G +W +AVK LK + + E EF E ++ ++H NL+ L G
Sbjct: 19 HKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 76
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
C I+ ++M E +N + +A + + YL +
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---N 131
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASE 221
IHRD+ A N L+ + +VADFG ++L+ K + + APE K S
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 222 SCDVYSFGILLLELAS-GKKPIEKVN 246
DV++FG+LL E+A+ G P ++
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPYPGID 217
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 67/306 (21%)
Query: 34 HSATNNFNYDNK----LGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAVEVEIL 88
H+ F D K +G GGFG V+ + DG +KR+K + KAE E V+ L
Sbjct: 3 HTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKAL 58
Query: 89 ARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLL------------N 136
A++ H N++ G C +G +DY P +CL
Sbjct: 59 AKLDHVNIVHYNG-CWDG------FDYDPETSSKNSSRSKT--KCLFIQMEFCDKGTLEQ 109
Query: 137 W--NRR---------MDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADF 185
W RR +++ +G+ Y+H + +I+RD+K SN+ L + ++ DF
Sbjct: 110 WIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDF 166
Query: 186 GFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKV 245
G + + R KGTL Y++PE + D+Y+ G++L EL
Sbjct: 167 GLVTSLKNDGKR--XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH-------- 216
Query: 246 NSAIKRTITDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTML 305
+ D A + + F++L D ++ F ++E + +L L KPE RP
Sbjct: 217 -------VCDTAFETS--KFFTDLRDGIISDIFDKKE--KTLLQKLLS--KKPEDRPNTS 263
Query: 306 EVLDLL 311
E+L L
Sbjct: 264 EILRTL 269
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 101/206 (49%), Gaps = 22/206 (10%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCAE 105
+G+G FG V G + G+++AVK +K ++ F E ++ ++RH NL+ L G E
Sbjct: 20 IGKGEFGDVMLGD-YRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 106 GQERL-IVYDYMPNXXXX----XXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
+ L IV +YM +CLL ++ +D+ E + YL +
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS--LDVC----EAMEYLEGN--- 127
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKAS 220
+ +HRD+ A NVL+ D A+V+DFG K A+ K + + APE S
Sbjct: 128 NFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREAAFS 183
Query: 221 ESCDVYSFGILLLELAS-GKKPIEKV 245
DV+SFGILL E+ S G+ P ++
Sbjct: 184 TKSDVWSFGILLWEIYSFGRVPYPRI 209
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 95/211 (45%), Gaps = 36/211 (17%)
Query: 46 LGEGGFGSVYWGQLWD------GSQIAVKRLKVWSNKAEME-FAVEVEILARVRHKNLLS 98
LGEG FG V +D G +AVK LK + + E++IL + H++++
Sbjct: 39 LGEGHFGKVSL-YCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIK 97
Query: 99 LRGYC--AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS--------A 148
+G C A +V +Y+P L ++ R I +
Sbjct: 98 YKGCCEDAGAASLQLVMEYVP-------------LGSLRDYLPRHSIGLAQLLLFAQQIC 144
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TL 206
EG+ YLH H IHRD+ A NVLLD D ++ DFG AK +P+G R G +
Sbjct: 145 EGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPV 201
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELAS 237
+ APE K + DV+SFG+ L EL +
Sbjct: 202 FWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 86/181 (47%), Gaps = 18/181 (9%)
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVK----G 204
EG+ YLH + IHRD+KA N+LL D Q+ADFG + + G +V+ G
Sbjct: 132 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 205 TLGYLAPEYAMLGKASE-SCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACE 263
T ++APE + + D++SFGI +ELA+G P K +T P + E
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE 248
Query: 264 RKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLD---LLKGESKEKLT 320
+ + D + + + K + L C PEKRPT E+L K ++KE L
Sbjct: 249 ---TGVQDKEMLKKYGKSFRKMISL----CLQKDPEKRPTAAELLRHKFFQKAKNKEFLQ 301
Query: 321 E 321
E
Sbjct: 302 E 302
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 115/238 (48%), Gaps = 20/238 (8%)
Query: 46 LGEGGFGSVYWGQL-WDGSQ---IAVKRLKV-WSNKAEMEFAVEVEILARVRHKNLLSLR 100
+G G FG V G L G + +A+K LK ++ K +F E I+ + H N++ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
G + +I+ ++M N ++ + + + G A G+ YL A
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI---QLVGMLRGIAAGMKYL---ADM 154
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVT-TRVKG---TLGYLAPEYAML 216
+ +HRD+ A N+L++++ +V+DFG ++ + D + T T G + + APE
Sbjct: 155 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 214
Query: 217 GKASESCDVYSFGILLLELAS-GKKPI-EKVNSAIKRTI-TDWAL--PLACERKFSEL 269
K + + DV+S+GI++ E+ S G++P + N + I D+ L P+ C +L
Sbjct: 215 RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQL 272
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 141/320 (44%), Gaps = 50/320 (15%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQLW-DGSQI--AVKRLKVWSNKAE-MEFAVEVEILARV-R 92
N+ + + +GEG FG V ++ DG ++ A+KR+K +++K + +FA E+E+L ++
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 93 HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXEC------------LLNWNRR 140
H N+++L G C + +Y P+ E L+ +
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 141 MDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTT 200
+ A A G+ YL + IHRD+ A N+L+ ++ A++ADFG ++ G
Sbjct: 135 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK 187
Query: 201 RVKGTLG--YLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWA 257
+ G L ++A E + + DV+S+G+LL E+ S G P
Sbjct: 188 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY--------------- 232
Query: 258 LPLACERKFSELADPRLNGNFVEEELK---RVVLVALTCAHSKPEKRPTMLEVLDLLKGE 314
C +EL + G +E+ L V + C KP +RP+ ++L L
Sbjct: 233 ----CGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 288
Query: 315 SKEKLTELENDELFKSHQVA 334
+E+ T + N L++ A
Sbjct: 289 LEERKTYV-NTTLYEKFTYA 307
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 23/208 (11%)
Query: 46 LGEGGFGSVYWGQLW--DGSQIAVKR-LKVWSNKAEMEF--AVEVEILA--RVRHKNLLS 98
LG G FG+V+ G +W +G I + +KV +K+ + AV +LA + H +++
Sbjct: 39 LGSGVFGTVHKG-VWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 97
Query: 99 LRGYCAEGQERLIVYDYMPNXXX---XXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
L G C G +V Y+P + LLNW ++ A+G+ YL
Sbjct: 98 LLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYLE 150
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PDGATHVTTRVKGTLGYLAPEYA 214
H ++HR++ A NVLL + + QVADFG A L+ PD + + K + ++A E
Sbjct: 151 EHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 207
Query: 215 MLGKASESCDVYSFGILLLELAS-GKKP 241
GK + DV+S+G+ + EL + G +P
Sbjct: 208 HFGKYTHQSDVWSYGVTVWELMTFGAEP 235
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 134/299 (44%), Gaps = 46/299 (15%)
Query: 45 KLGEGGFGSVYWGQLWD------GSQIAVKRL-KVWSNKAEMEFAVEVEILARVRHKNLL 97
+LG+G FG VY G D +++AVK + + S + +EF E ++ +++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 98 SLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNR-------RMDIAIGSAEG 150
L G ++GQ L+V + M + E N R + +A A+G
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRP-EAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 151 IVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLG--Y 208
+ YL+ +HRD+ A N ++ DF ++ DFG + I + + KG L +
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRW 198
Query: 209 LAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV-NSAIKRTITDWALPLACERKF 266
+APE G + S D++SFG++L E+ S ++P + + N + + + D
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD----------- 247
Query: 267 SELADPRLNGNFVEEE---LKRVVLVALTCAHSKPEKRPTMLEVLDLLKGESKEKLTEL 322
G ++++ +RV + C P+ RPT LE+++LLK + E+
Sbjct: 248 ---------GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 297
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 134/299 (44%), Gaps = 46/299 (15%)
Query: 45 KLGEGGFGSVYWGQLWD------GSQIAVKRL-KVWSNKAEMEFAVEVEILARVRHKNLL 97
+LG+G FG VY G D +++AVK + + S + +EF E ++ +++
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 98 SLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNR-------RMDIAIGSAEG 150
L G ++GQ L+V + M + E N R + +A A+G
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRP-EAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 151 IVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLG--Y 208
+ YL+ +HRD+ A N ++ DF ++ DFG + I + + KG L +
Sbjct: 142 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRW 197
Query: 209 LAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV-NSAIKRTITDWALPLACERKF 266
+APE G + S D++SFG++L E+ S ++P + + N + + + D
Sbjct: 198 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD----------- 246
Query: 267 SELADPRLNGNFVEEE---LKRVVLVALTCAHSKPEKRPTMLEVLDLLKGESKEKLTEL 322
G ++++ +RV + C P+ RPT LE+++LLK + E+
Sbjct: 247 ---------GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 296
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 44 NKLGEGGFG-SVYWGQLWDGSQIAVKRLKV--WSNKAEMEFAVEVEILARVRHKNLLSLR 100
K+GEG FG ++ DG Q +K + + S+K E EV +LA ++H N++ R
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 101 GYCAEGQERLIVYDYMPN----XXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
E IV DY + +L+W ++ +A L H
Sbjct: 90 ESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA---------LKH 140
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAML 216
I+HRDIK+ N+ L D Q+ DFG A+++ + + GT YL+PE
Sbjct: 141 VHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL-NSTVELARACIGTPYYLSPEICEN 199
Query: 217 GKASESCDVYSFGILLLELASGKKPIE 243
+ D+++ G +L EL + K E
Sbjct: 200 KPYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 26/214 (12%)
Query: 44 NKLGEGGFGSVYWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+KLG G +G VY G +W +AVK LK + + E EF E ++ ++H NL+ L G
Sbjct: 226 HKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 283
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP- 160
C I+ ++M LL++ R + SA ++Y+ +
Sbjct: 284 VCTREPPFYIITEFM-------------TYGNLLDYLRECNRQEVSAVVLLYMATQISSA 330
Query: 161 -------HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEY 213
+ IHR++ A N L+ + +VADFG ++L+ K + + APE
Sbjct: 331 MEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 390
Query: 214 AMLGKASESCDVYSFGILLLELAS-GKKPIEKVN 246
K S DV++FG+LL E+A+ G P ++
Sbjct: 391 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 424
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 126/298 (42%), Gaps = 66/298 (22%)
Query: 46 LGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCA 104
+G GGFG V+ + DG ++R+K + KAE E V+ LA++ H N++ G C
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIVHYNG-CW 74
Query: 105 EG--------QERLIVYDYMPNXXXXXXXXXXXXXECLL------------NW--NRR-- 140
+G + L DY P +CL W RR
Sbjct: 75 DGFDYDPETSDDSLESSDYDPENSKNSSRSKT---KCLFIQMEFCDKGTLEQWIEKRRGE 131
Query: 141 -------MDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPD 193
+++ +G+ Y+H + +IHRD+K SN+ L + ++ DFG + +
Sbjct: 132 KLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKN 188
Query: 194 GATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
TR KGTL Y++PE + D+Y+ G++L EL +
Sbjct: 189 DGKR--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH---------------V 231
Query: 254 TDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
D A + + F++L D ++ F ++E + +L L KPE RP E+L L
Sbjct: 232 CDTAFETS--KFFTDLRDGIISDIFDKKE--KTLLQKLLS--KKPEDRPNTSEILRTL 283
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 79/165 (47%), Gaps = 15/165 (9%)
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVK----G 204
EG+ YLH + IHRD+KA N+LL D Q+ADFG + + G +V+ G
Sbjct: 127 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 183
Query: 205 TLGYLAPEYAMLGKASE-SCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACE 263
T ++APE + + D++SFGI +ELA+G P K +T P + E
Sbjct: 184 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE 243
Query: 264 RKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
+ + D + + + K + L C PEKRPT E+L
Sbjct: 244 ---TGVQDKEMLKKYGKSFRKMISL----CLQKDPEKRPTAAELL 281
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 137/317 (43%), Gaps = 46/317 (14%)
Query: 27 IFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWD------GSQIAVKRL-KVWSNKAEM 79
+F E + +LG+G FG VY G D +++AVK + + S + +
Sbjct: 3 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 62
Query: 80 EFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNR 139
EF E ++ +++ L G ++GQ L+V + M + E N R
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRP-EAENNPGR 121
Query: 140 -------RMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP 192
+ +A A+G+ YL+ +HRD+ A N ++ DF ++ DFG + I
Sbjct: 122 PPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIX 178
Query: 193 DGATHVTTRVKGTLG--YLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV-NSA 248
+ KG L ++APE G + S D++SFG++L E+ S ++P + + N
Sbjct: 179 E-TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 237
Query: 249 IKRTITDWALPLACERKFSELADPRLNGNFVEEE---LKRVVLVALTCAHSKPEKRPTML 305
+ + + D G ++++ +RV + C P+ RPT L
Sbjct: 238 VLKFVMD--------------------GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFL 277
Query: 306 EVLDLLKGESKEKLTEL 322
E+++LLK + E+
Sbjct: 278 EIVNLLKDDLHPSFPEV 294
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 137/317 (43%), Gaps = 46/317 (14%)
Query: 27 IFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWD------GSQIAVKRL-KVWSNKAEM 79
+F E + +LG+G FG VY G D +++AVK + + S + +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 80 EFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNR 139
EF E ++ +++ L G ++GQ L+V + M + E N R
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRP-EAENNPGR 124
Query: 140 -------RMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP 192
+ +A A+G+ YL+ +HRD+ A N ++ DF ++ DFG + I
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIX 181
Query: 193 DGATHVTTRVKGTLG--YLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV-NSA 248
+ KG L ++APE G + S D++SFG++L E+ S ++P + + N
Sbjct: 182 E-TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
Query: 249 IKRTITDWALPLACERKFSELADPRLNGNFVEEE---LKRVVLVALTCAHSKPEKRPTML 305
+ + + D G ++++ +RV + C P+ RPT L
Sbjct: 241 VLKFVMD--------------------GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFL 280
Query: 306 EVLDLLKGESKEKLTEL 322
E+++LLK + E+
Sbjct: 281 EIVNLLKDDLHPSFPEV 297
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 23/208 (11%)
Query: 46 LGEGGFGSVYWGQLW--DGSQIAVKR-LKVWSNKAEMEF--AVEVEILA--RVRHKNLLS 98
LG G FG+V+ G +W +G I + +KV +K+ + AV +LA + H +++
Sbjct: 21 LGSGVFGTVHKG-VWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 79
Query: 99 LRGYCAEGQERLIVYDYMPNXXX---XXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
L G C G +V Y+P + LLNW ++ A+G+ YL
Sbjct: 80 LLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYLE 132
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PDGATHVTTRVKGTLGYLAPEYA 214
H ++HR++ A NVLL + + QVADFG A L+ PD + + K + ++A E
Sbjct: 133 EHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 189
Query: 215 MLGKASESCDVYSFGILLLELAS-GKKP 241
GK + DV+S+G+ + EL + G +P
Sbjct: 190 HFGKYTHQSDVWSYGVTVWELMTFGAEP 217
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 151/344 (43%), Gaps = 56/344 (16%)
Query: 14 DRKEKGKKQPTWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLW-DGSQI--AVKRL 70
+RK K PT I+ + + N+ + + +GEG FG V ++ DG ++ A+KR+
Sbjct: 4 NRKVKNNPDPT--IYPVLDW----NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM 57
Query: 71 KVWSNKAE-MEFAVEVEILARV-RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXX 128
K +++K + +FA E+E+L ++ H N+++L G C + +Y P+
Sbjct: 58 KEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKS 117
Query: 129 XXXEC------------LLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA 176
E L+ + + A A G+ YL + IHR++ A N+L+
Sbjct: 118 RVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGE 174
Query: 177 DFKAQVADFGFAKLIPDGATHVTTRVKGTLG--YLAPEYAMLGKASESCDVYSFGILLLE 234
++ A++ADFG ++ G + G L ++A E + + DV+S+G+LL E
Sbjct: 175 NYVAKIADFGLSR----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 230
Query: 235 LAS-GKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEELK---RVVLVA 290
+ S G P C +EL + G +E+ L V +
Sbjct: 231 IVSLGGTPY-------------------CGMTCAELYEKLPQGYRLEKPLNCDDEVYDLM 271
Query: 291 LTCAHSKPEKRPTMLEVLDLLKGESKEKLTELENDELFKSHQVA 334
C KP +RP+ ++L L +E+ T + N L++ A
Sbjct: 272 RQCWREKPYERPSFAQILVSLNRMLEERKTYV-NTTLYEKFTYA 314
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 102/229 (44%), Gaps = 16/229 (6%)
Query: 39 NFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRL-KVWSNKAEMEFAV--EVEILARVRHK 94
+F N LG+G F VY + + G ++A+K + K KA M V EV+I +++H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 95 NLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYL 154
++L L Y + +V + N + N G++YL
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKP---FSENEARHFMHQIITGMLYL 128
Query: 155 HHHATPHIIHRDIKASNVLLDADFKAQVADFGFA-KLIPDGATHVTTRVKGTLGYLAPEY 213
H H I+HRD+ SN+LL + ++ADFG A +L H T + GT Y++PE
Sbjct: 129 HSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEI 183
Query: 214 AMLGKASESCDVYSFGILLLELASGKKPIEK---VNSAIKRTITDWALP 259
A DV+S G + L G+ P + N+ K + D+ +P
Sbjct: 184 ATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMP 232
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 34/271 (12%)
Query: 44 NKLGEGGFGSVYWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+KLG G +G VY G +W +AVK LK + + E EF E ++ ++H NL+ L G
Sbjct: 223 HKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 280
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
C I+ ++M E M I SA + + +
Sbjct: 281 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKN 335
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASE 221
IHR++ A N L+ + +VADFG ++L+ K + + APE K S
Sbjct: 336 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 395
Query: 222 SCDVYSFGILLLELAS-GKKPIEKVN-SAIKRTI-TDWAL--PLACERKFSELADPRLNG 276
DV++FG+LL E+A+ G P ++ S + + D+ + P C K EL
Sbjct: 396 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR----- 450
Query: 277 NFVEEELKRVVLVALTCAHSKPEKRPTMLEV 307
C P RP+ E+
Sbjct: 451 ---------------ACWQWNPSDRPSFAEI 466
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 125/305 (40%), Gaps = 44/305 (14%)
Query: 24 TWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLW----DGS--QIAVKRL-KVWSNK 76
T I LKE+ N LG G FG VY GQ+ D S Q+AVK L +V+S +
Sbjct: 33 TSSISDLKEV--PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQ 90
Query: 77 AEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLN 136
E++F +E I+++ H+N++ G + R I+ + M +
Sbjct: 91 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 150
Query: 137 WNRRMD---IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVA---DFGFAKL 190
+D +A A G YL + H IHRDI A N LL +VA DFG A+
Sbjct: 151 SLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 207
Query: 191 IPDGATHVTTRVKGT----LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPI-EK 244
I + + R G + ++ PE M G + D +SFG+LL E+ S G P K
Sbjct: 208 IYRASYY---RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 264
Query: 245 VNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTM 304
N + +T DP N V + C +PE RP
Sbjct: 265 SNQEVLEFVTSGG-----------RMDPPKNCP------GPVYRIMTQCWQHQPEDRPNF 307
Query: 305 LEVLD 309
+L+
Sbjct: 308 AIILE 312
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 132/299 (44%), Gaps = 46/299 (15%)
Query: 45 KLGEGGFGSVYWGQLWD------GSQIAVKRL-KVWSNKAEMEFAVEVEILARVRHKNLL 97
+LG+G FG VY G D +++AVK + + S + +EF E ++ +++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 98 SLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNR-------RMDIAIGSAEG 150
L G ++GQ L+V + M + E N R + +A A+G
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRP-EAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 151 IVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLG--Y 208
+ YL+ +HRD+ A N ++ DF ++ DFG + I + KG L +
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE-TDXXRKGGKGLLPVRW 198
Query: 209 LAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV-NSAIKRTITDWALPLACERKF 266
+APE G + S D++SFG++L E+ S ++P + + N + + + D
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD----------- 247
Query: 267 SELADPRLNGNFVEEE---LKRVVLVALTCAHSKPEKRPTMLEVLDLLKGESKEKLTEL 322
G ++++ +RV + C P RPT LE+++LLK + E+
Sbjct: 248 ---------GGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFPEV 297
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 104/233 (44%), Gaps = 14/233 (6%)
Query: 44 NKLGEGGFGSVYWGQLWD--GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+KLG G +G VY G +W +AVK LK + + E EF E ++ ++H NL+ L G
Sbjct: 265 HKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 322
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
C I+ ++M E M I SA + + +
Sbjct: 323 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKN 377
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASE 221
IHR++ A N L+ + +VADFG ++L+ K + + APE K S
Sbjct: 378 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 437
Query: 222 SCDVYSFGILLLELAS-GKKPIEKVN-SAIKRTI-TDWAL--PLACERKFSEL 269
DV++FG+LL E+A+ G P ++ S + + D+ + P C K EL
Sbjct: 438 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYEL 490
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 45 KLGEGGFGSVY-WGQLWDGSQIAVKRLKV-WSNKAEMEFAVEVEILARVRHKNLLSLRGY 102
+LG GGFG V W G Q+A+K+ + S K + +E++I+ ++ H N++S R
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR-E 80
Query: 103 CAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIV---------- 152
+G ++L PN + L + + + G EG +
Sbjct: 81 VPDGLQKL-----APNDLPLLAMEYCEGGD-LRKYLNQFENCCGLKEGPIRTLLSDISSA 134
Query: 153 --YLHHHATPHIIHRDIKASNVLLDADFKA---QVADFGFAKLIPDGATHVTTRVKGTLG 207
YLH + IIHRD+K N++L + ++ D G+AK + G + T GTL
Sbjct: 135 LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG--ELCTEFVGTLQ 189
Query: 208 YLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
YLAPE K + + D +SFG L E +G +P
Sbjct: 190 YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 45 KLGEGGFGSVY-WGQLWDGSQIAVKRLKV-WSNKAEMEFAVEVEILARVRHKNLLSLRGY 102
+LG GGFG V W G Q+A+K+ + S K + +E++I+ ++ H N++S R
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR-E 79
Query: 103 CAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIV---------- 152
+G ++L PN + L + + + G EG +
Sbjct: 80 VPDGLQKL-----APNDLPLLAMEYCEGGD-LRKYLNQFENCCGLKEGPIRTLLSDISSA 133
Query: 153 --YLHHHATPHIIHRDIKASNVLLDADFKA---QVADFGFAKLIPDGATHVTTRVKGTLG 207
YLH + IIHRD+K N++L + ++ D G+AK + G + T GTL
Sbjct: 134 LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG--ELCTEFVGTLQ 188
Query: 208 YLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
YLAPE K + + D +SFG L E +G +P
Sbjct: 189 YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 26/222 (11%)
Query: 46 LGEGGFGSVYWGQLW--DGSQI----AVKRL-KVWSNKAEMEFAVEVEILARVRHKNLLS 98
LG G FG+VY G +W +G + A+K L + KA +EF E I+A + H +L+
Sbjct: 23 LGSGAFGTVYKG-IWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 99 LRGYCAEGQERLIVYDYMPN---XXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
L G C +L+ MP+ + LLNW + A+G++YL
Sbjct: 82 LLGVCLSPTIQLVT-QLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLE 134
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTRVKGTLGYLAPEYA 214
++HRD+ A NVL+ + ++ DFG A+L+ D + K + ++A E
Sbjct: 135 ER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 191
Query: 215 MLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITD 255
K + DV+S+G+ + EL + G KP + + + R I D
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT---REIPD 230
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 40 FNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRLKVWSNKAEMEFAVEVEILARVRHKNLLS 98
F+ KLGEG +GSVY + QI A+K++ V S+ E+ E+ I+ + +++
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEI--IKEISIMQQCDSPHVVK 88
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHA 158
G + + IV +Y L + I + +G+ YLH
Sbjct: 89 YYGSYFKNTDLWIVMEYC---GAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR 145
Query: 159 TPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGK 218
IHRDIKA N+LL+ + A++ADFG A + D V GT ++APE ++ +
Sbjct: 146 K---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK-RNXVIGTPFWMAPE--VIQE 199
Query: 219 ASESC--DVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNG 276
+C D++S GI +E+A GK P ++ R I + +P F + P L
Sbjct: 200 IGYNCVADIWSLGITAIEMAEGKPPYADIHPM--RAI--FMIPTNPPPTFRK---PELWS 252
Query: 277 NFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
+ + +K+ C PE+R T ++L
Sbjct: 253 DNFTDFVKQ-------CLVKSPEQRATATQLL 277
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 104/231 (45%), Gaps = 25/231 (10%)
Query: 24 TWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLW----DGS--QIAVKRL-KVWSNK 76
T I LKE+ N LG G FG VY GQ+ D S Q+AVK L +V S +
Sbjct: 19 TSSISDLKEV--PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ 76
Query: 77 AEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLN 136
E++F +E I++++ H+N++ G + R I+ + M +
Sbjct: 77 DELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 136
Query: 137 WNRRMD---IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVA---DFGFAKL 190
+D +A A G YL + H IHRDI A N LL +VA DFG A+
Sbjct: 137 SLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 193
Query: 191 IPDGATHVTTRVKGT----LGYLAPEYAMLGKASESCDVYSFGILLLELAS 237
I + + R G + ++ PE M G + D +SFG+LL E+ S
Sbjct: 194 IYRASYY---RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 103/231 (44%), Gaps = 25/231 (10%)
Query: 24 TWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLW----DGS--QIAVKRL-KVWSNK 76
T I LKE+ N LG G FG VY GQ+ D S Q+AVK L +V S +
Sbjct: 45 TSSISDLKEV--PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ 102
Query: 77 AEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLN 136
E++F +E I+++ H+N++ G + R I+ + M +
Sbjct: 103 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 162
Query: 137 WNRRMD---IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVA---DFGFAKL 190
+D +A A G YL + H IHRDI A N LL +VA DFG A+
Sbjct: 163 SLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 219
Query: 191 IPDGATHVTTRVKGT----LGYLAPEYAMLGKASESCDVYSFGILLLELAS 237
I + + R G + ++ PE M G + D +SFG+LL E+ S
Sbjct: 220 IYRASYY---RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 125/305 (40%), Gaps = 44/305 (14%)
Query: 24 TWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLW----DGS--QIAVKRL-KVWSNK 76
T I LKE+ N LG G FG VY GQ+ D S Q+AVK L +V S +
Sbjct: 33 TSSISDLKEV--PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ 90
Query: 77 AEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLN 136
E++F +E I++++ H+N++ G + R I+ + M +
Sbjct: 91 DELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 150
Query: 137 WNRRMD---IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVA---DFGFAKL 190
+D +A A G YL + H IHRDI A N LL +VA DFG A+
Sbjct: 151 SLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 207
Query: 191 IPDGATHVTTRVKGT----LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPI-EK 244
I + + R G + ++ PE M G + D +SFG+LL E+ S G P K
Sbjct: 208 IYRASYY---RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 264
Query: 245 VNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTM 304
N + +T DP N V + C +PE RP
Sbjct: 265 SNQEVLEFVTSGG-----------RMDPPKNCP------GPVYRIMTQCWQHQPEDRPNF 307
Query: 305 LEVLD 309
+L+
Sbjct: 308 AIILE 312
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 103/231 (44%), Gaps = 25/231 (10%)
Query: 24 TWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLW----DGS--QIAVKRL-KVWSNK 76
T I LKE+ N LG G FG VY GQ+ D S Q+AVK L +V S +
Sbjct: 35 TSSISDLKEV--PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ 92
Query: 77 AEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLN 136
E++F +E I+++ H+N++ G + R I+ + M +
Sbjct: 93 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 152
Query: 137 WNRRMD---IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVA---DFGFAKL 190
+D +A A G YL + H IHRDI A N LL +VA DFG A+
Sbjct: 153 SLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 209
Query: 191 IPDGATHVTTRVKGT----LGYLAPEYAMLGKASESCDVYSFGILLLELAS 237
I + + R G + ++ PE M G + D +SFG+LL E+ S
Sbjct: 210 IYRASYY---RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 103/231 (44%), Gaps = 25/231 (10%)
Query: 24 TWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLW----DGS--QIAVKRL-KVWSNK 76
T I LKE+ N LG G FG VY GQ+ D S Q+AVK L +V S +
Sbjct: 25 TSSISDLKEV--PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ 82
Query: 77 AEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLN 136
E++F +E I+++ H+N++ G + R I+ + M +
Sbjct: 83 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 142
Query: 137 WNRRMD---IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVA---DFGFAKL 190
+D +A A G YL + H IHRDI A N LL +VA DFG A+
Sbjct: 143 SLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 199
Query: 191 IPDGATHVTTRVKGT----LGYLAPEYAMLGKASESCDVYSFGILLLELAS 237
I + + R G + ++ PE M G + D +SFG+LL E+ S
Sbjct: 200 IYRASYY---RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 26/222 (11%)
Query: 46 LGEGGFGSVYWGQLW--DGSQI----AVKRL-KVWSNKAEMEFAVEVEILARVRHKNLLS 98
LG G FG+VY G +W +G + A+K L + KA +EF E I+A + H +L+
Sbjct: 46 LGSGAFGTVYKG-IWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 104
Query: 99 LRGYCAEGQERLIVYDYMPN---XXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
L G C +L V MP+ + LLNW + A+G++YL
Sbjct: 105 LLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLE 157
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTRVKGTLGYLAPEYA 214
++HRD+ A NVL+ + ++ DFG A+L+ D + K + ++A E
Sbjct: 158 ER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 214
Query: 215 MLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITD 255
K + DV+S+G+ + EL + G KP + + + R I D
Sbjct: 215 HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT---REIPD 253
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 133/299 (44%), Gaps = 46/299 (15%)
Query: 45 KLGEGGFGSVYWGQLWD------GSQIAVKRL-KVWSNKAEMEFAVEVEILARVRHKNLL 97
+LG+G FG VY G D +++AVK + + S + +EF E ++ +++
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 98 SLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNR-------RMDIAIGSAEG 150
L G ++GQ L+V + M + E N R + +A A+G
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRP-EAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 151 IVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLG--Y 208
+ YL+ +HR++ A N ++ DF ++ DFG + I + + KG L +
Sbjct: 144 MAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRW 199
Query: 209 LAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV-NSAIKRTITDWALPLACERKF 266
+APE G + S D++SFG++L E+ S ++P + + N + + + D
Sbjct: 200 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD----------- 248
Query: 267 SELADPRLNGNFVEEE---LKRVVLVALTCAHSKPEKRPTMLEVLDLLKGESKEKLTEL 322
G ++++ +RV + C P RPT LE+++LLK + E+
Sbjct: 249 ---------GGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFPEV 298
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 133/299 (44%), Gaps = 46/299 (15%)
Query: 45 KLGEGGFGSVYWGQLWD------GSQIAVKRL-KVWSNKAEMEFAVEVEILARVRHKNLL 97
+LG+G FG VY G D +++AVK + + S + +EF E ++ +++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 98 SLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNR-------RMDIAIGSAEG 150
L G ++GQ L+V + M + E N R + +A A+G
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRP-EAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 151 IVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLG--Y 208
+ YL+ +HR++ A N ++ DF ++ DFG + I + + KG L +
Sbjct: 143 MAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRW 198
Query: 209 LAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV-NSAIKRTITDWALPLACERKF 266
+APE G + S D++SFG++L E+ S ++P + + N + + + D
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD----------- 247
Query: 267 SELADPRLNGNFVEEE---LKRVVLVALTCAHSKPEKRPTMLEVLDLLKGESKEKLTEL 322
G ++++ +RV + C P RPT LE+++LLK + E+
Sbjct: 248 ---------GGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFPEV 297
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 124/305 (40%), Gaps = 44/305 (14%)
Query: 24 TWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLW----DGS--QIAVKRL-KVWSNK 76
T I LKE+ N LG G FG VY GQ+ D S Q+AVK L +V S +
Sbjct: 33 TSSISDLKEV--PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ 90
Query: 77 AEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLN 136
E++F +E I+++ H+N++ G + R I+ + M +
Sbjct: 91 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPS 150
Query: 137 WNRRMD---IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVA---DFGFAKL 190
+D +A A G YL + H IHRDI A N LL +VA DFG A+
Sbjct: 151 SLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 207
Query: 191 IPDGATHVTTRVKGT----LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPI-EK 244
I + + R G + ++ PE M G + D +SFG+LL E+ S G P K
Sbjct: 208 IYRASYY---RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 264
Query: 245 VNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTM 304
N + +T DP N V + C +PE RP
Sbjct: 265 SNQEVLEFVTSGG-----------RMDPPKNCP------GPVYRIMTQCWQHQPEDRPNF 307
Query: 305 LEVLD 309
+L+
Sbjct: 308 AIILE 312
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 103/231 (44%), Gaps = 25/231 (10%)
Query: 24 TWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLW----DGS--QIAVKRL-KVWSNK 76
T I LKE+ N LG G FG VY GQ+ D S Q+AVK L +V S +
Sbjct: 18 TSSISDLKEV--PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ 75
Query: 77 AEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLN 136
E++F +E I+++ H+N++ G + R I+ + M +
Sbjct: 76 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPS 135
Query: 137 WNRRMD---IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVA---DFGFAKL 190
+D +A A G YL + H IHRDI A N LL +VA DFG A+
Sbjct: 136 SLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 192
Query: 191 IPDGATHVTTRVKGT----LGYLAPEYAMLGKASESCDVYSFGILLLELAS 237
I + + R G + ++ PE M G + D +SFG+LL E+ S
Sbjct: 193 IYRASYY---RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 136/330 (41%), Gaps = 89/330 (26%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQLWDGSQ------IAVKRLKVWSNKAEME-FAVEVEILAR 90
NN + LG G FG V + + +AVK LK ++ E E E++I++
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 91 V-RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXEC---LLNWNRR------ 140
+ +H+N+++L G C G L++ +Y C LLN+ RR
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYC----------------CYGDLLNFLRRKAEAML 134
Query: 141 --------------------------MDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLL 174
+ + A+G+ +L A+ + IHRD+ A NVLL
Sbjct: 135 GPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLL 191
Query: 175 DADFKAQVADFGFAKLIPDGATHVTTRVKGT----LGYLAPEYAMLGKASESCDVYSFGI 230
A++ DFG A+ I + + ++ VKG + ++APE + DV+S+GI
Sbjct: 192 TNGHVAKIGDFGLARDIMNDSNYI---VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 248
Query: 231 LLLELAS-GKKPIEK--VNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEELKRVV 287
LL E+ S G P VNS + + D ++A P K +
Sbjct: 249 LLWEIFSLGLNPYPGILVNSKFYKLVKDG----------YQMAQPAF-------APKNIY 291
Query: 288 LVALTCAHSKPEKRPTMLEVLDLLKGESKE 317
+ C +P RPT ++ L+ +++E
Sbjct: 292 SIMQACWALEPTHRPTFQQICSFLQEQAQE 321
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 103/231 (44%), Gaps = 25/231 (10%)
Query: 24 TWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLW----DGS--QIAVKRL-KVWSNK 76
T I LKE+ N LG G FG VY GQ+ D S Q+AVK L +V S +
Sbjct: 18 TSSISDLKEV--PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ 75
Query: 77 AEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLN 136
E++F +E I+++ H+N++ G + R I+ + M +
Sbjct: 76 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 135
Query: 137 WNRRMD---IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVA---DFGFAKL 190
+D +A A G YL + H IHRDI A N LL +VA DFG A+
Sbjct: 136 SLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 192
Query: 191 IPDGATHVTTRVKGT----LGYLAPEYAMLGKASESCDVYSFGILLLELAS 237
I + + R G + ++ PE M G + D +SFG+LL E+ S
Sbjct: 193 IYRASYY---RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 132/317 (41%), Gaps = 39/317 (12%)
Query: 45 KLGEGGFGSVYWGQLWDGSQ-----IAVKRLK--VWSNKAEME-FAVEVEILARVRHKNL 96
KLG+G FG V G+ WD +AVK LK V S M+ F EV + + H+NL
Sbjct: 19 KLGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 97 LSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+ L G +++ + P L +R A+ AEG+ YL
Sbjct: 78 IRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSR---YAVQVAEGMGYLE- 132
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTR--VKGTLGYLAPEYA 214
+ IHRD+ A N+LL ++ DFG + +P H + K + APE
Sbjct: 133 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 215 MLGKASESCDVYSFGILLLELAS-GKKPIEKVN-SAIKRTITDWALPLACERKFSELADP 272
S + D + FG+ L E+ + G++P +N S I I +++ L P
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI---------DKEGERLPRP 241
Query: 273 RLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLLKGESKEKLTELEN-DELFKSH 331
E+ + + V + C KPE RPT + + D L + L++ +E K H
Sbjct: 242 -------EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRALQDFEEPDKLH 294
Query: 332 QVADYNDGKAVAEDSAE 348
ND V E AE
Sbjct: 295 --IQMNDVITVIEGRAE 309
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 42/280 (15%)
Query: 46 LGEGGFG-SVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCA 104
LG+G FG ++ G + +K L + + + F EV+++ + H N+L G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 105 EGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIH 164
+ + + +Y+ + W++R+ A A G+ YLH + +IIH
Sbjct: 78 KDKRLNFITEYI---KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIH 131
Query: 165 RDIKASNVLLDADFKAQVADFGFAKLIPDGATHV-------------TTRVKGTLGYLAP 211
RD+ + N L+ + VADFG A+L+ D T V G ++AP
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIEKVNS---AIKRTITDWALPLACERKF-S 267
E E DV+SFGI+L E+ I +VN+ + RT+ D+ L + R F
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEI------IGRVNADPDYLPRTM-DFGLNV---RGFLD 241
Query: 268 ELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEV 307
P +F + + C PEKRP+ +++
Sbjct: 242 RYCPPNCPPSFFP--------ITVRCCDLDPEKRPSFVKL 273
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 125/303 (41%), Gaps = 38/303 (12%)
Query: 46 LGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAE---MEFAVEVEILARVRHKNLLSL-- 99
LG GG V+ + L D +AVK L+ + + F E + A + H ++++
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 100 --RGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
G IV +Y+ E + R +++ + + + + H +
Sbjct: 80 TGEAETPAGPLPYIVMEYV----DGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN 135
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHV--TTRVKGTLGYLAPEYAM 215
IIHRD+K +N+L+ A +V DFG A+ I D V T V GT YL+PE A
Sbjct: 136 G---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQAR 192
Query: 216 LGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLN 275
DVYS G +L E+ +G+ P D + +A + + P
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTG----------DSPVSVAYQHVREDPIPPSAR 242
Query: 276 GNFVEEELKRVVLVALTCAHSKPEKR-PTMLEV-LDLLK---GESKEK---LTELENDEL 327
+ +L VVL AL PE R T E+ DL++ GE E LT+ E L
Sbjct: 243 HEGLSADLDAVVLKALA---KNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAERTSL 299
Query: 328 FKS 330
S
Sbjct: 300 LSS 302
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 123/305 (40%), Gaps = 44/305 (14%)
Query: 24 TWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLW----DGS--QIAVKRL-KVWSNK 76
T I LKE+ N LG G FG VY GQ+ D S Q+AVK L +V S +
Sbjct: 59 TSSISDLKEV--PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ 116
Query: 77 AEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLN 136
E++F +E I+++ H+N++ G + R I+ + M +
Sbjct: 117 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 176
Query: 137 WNRRMD---IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVA---DFGFAKL 190
+D +A A G YL + H IHRDI A N LL +VA DFG A+
Sbjct: 177 SLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 233
Query: 191 IPDGATHVTTRVKGT----LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPI-EK 244
I + R G + ++ PE M G + D +SFG+LL E+ S G P K
Sbjct: 234 IYRAGYY---RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 290
Query: 245 VNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTM 304
N + +T DP N V + C +PE RP
Sbjct: 291 SNQEVLEFVTSGG-----------RMDPPKNCP------GPVYRIMTQCWQHQPEDRPNF 333
Query: 305 LEVLD 309
+L+
Sbjct: 334 AIILE 338
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 102/231 (44%), Gaps = 25/231 (10%)
Query: 24 TWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLW----DGS--QIAVKRL-KVWSNK 76
T I LKE+ N LG G FG VY GQ+ D S Q+AVK L +V S +
Sbjct: 36 TSSISDLKEV--PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ 93
Query: 77 AEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLN 136
E++F +E I+++ H+N++ G + R I+ + M +
Sbjct: 94 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 153
Query: 137 WNRRMD---IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVA---DFGFAKL 190
+D +A A G YL + H IHRDI A N LL +VA DFG A+
Sbjct: 154 SLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 210
Query: 191 IPDGATHVTTRVKGT----LGYLAPEYAMLGKASESCDVYSFGILLLELAS 237
I + R G + ++ PE M G + D +SFG+LL E+ S
Sbjct: 211 IYRAGYY---RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 103/231 (44%), Gaps = 25/231 (10%)
Query: 24 TWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLW----DGS--QIAVKRL-KVWSNK 76
T I LKE+ N LG G FG VY GQ+ D S Q+AVK L +V S +
Sbjct: 19 TSSISDLKEV--PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ 76
Query: 77 AEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLN 136
E++F +E I+++ H+N++ G + R I+ + M +
Sbjct: 77 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 136
Query: 137 WNRRMD---IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVA---DFGFAKL 190
+D +A A G YL + H IHRDI A N LL +VA DFG A+
Sbjct: 137 SLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 193
Query: 191 IPDGATHVTTRVKGT----LGYLAPEYAMLGKASESCDVYSFGILLLELAS 237
I + + R G + ++ PE M G + D +SFG+LL E+ S
Sbjct: 194 IYRASYY---RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 46 LGEGGFGSVYWGQLWDG----SQIAVKRLKV-WSNKAEMEFAVEVEILARVRHKNLLSLR 100
+G G FG V G+L S +A+K LK ++ + EF E I+ + H N++ L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
G +I+ ++M N ++ + + + G A G+ YL +
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGIASGMRYLAEMS-- 138
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRV----KGTLGYLAPEYAML 216
+HRD+ A N+L++++ +V+DFG ++ + + ++ T K + + APE
Sbjct: 139 -YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAF 197
Query: 217 GKASESCDVYSFGILLLELAS-GKKP 241
K + + D +S+GI++ E+ S G++P
Sbjct: 198 RKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 103/231 (44%), Gaps = 25/231 (10%)
Query: 24 TWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLW----DGS--QIAVKRL-KVWSNK 76
T I LKE+ N LG G FG VY GQ+ D S Q+AVK L +V S +
Sbjct: 19 TSSISDLKEV--PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ 76
Query: 77 AEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLN 136
E++F +E I+++ H+N++ G + R I+ + M +
Sbjct: 77 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 136
Query: 137 WNRRMD---IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVA---DFGFAKL 190
+D +A A G YL + H IHRDI A N LL +VA DFG A+
Sbjct: 137 SLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQD 193
Query: 191 IPDGATHVTTRVKGT----LGYLAPEYAMLGKASESCDVYSFGILLLELAS 237
I + + R G + ++ PE M G + D +SFG+LL E+ S
Sbjct: 194 IYRASYY---RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 103/231 (44%), Gaps = 25/231 (10%)
Query: 24 TWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLW----DGS--QIAVKRL-KVWSNK 76
T I LKE+ N LG G FG VY GQ+ D S Q+AVK L +V S +
Sbjct: 10 TSSISDLKEV--PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ 67
Query: 77 AEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLN 136
E++F +E I+++ H+N++ G + R I+ + M +
Sbjct: 68 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 127
Query: 137 WNRRMD---IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVA---DFGFAKL 190
+D +A A G YL + H IHRDI A N LL +VA DFG A+
Sbjct: 128 SLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 184
Query: 191 IPDGATHVTTRVKGT----LGYLAPEYAMLGKASESCDVYSFGILLLELAS 237
I + + R G + ++ PE M G + D +SFG+LL E+ S
Sbjct: 185 IYRASYY---RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 123/289 (42%), Gaps = 39/289 (13%)
Query: 46 LGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCA 104
LG+G +G VY G+ L + +IA+K + ++ E+ + ++HKN++ G +
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 105 EGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD--IAIGS-----AEGIVYLHHH 157
E I + +P W D IG EG+ YLH +
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRS--------KWGPLKDNEQTIGFYTKQILEGLKYLHDN 141
Query: 158 ATPHIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAML 216
I+HRDIK NVL++ +++DFG +K + G T GTL Y+APE
Sbjct: 142 ---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDK 197
Query: 217 GKA--SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERKFSELADPRL 274
G ++ D++S G ++E+A+GK P ++ P A K ++
Sbjct: 198 GPRGYGKAADIWSLGCTIIEMATGKPPFYELGE-----------PQAAMFKVGMF---KV 243
Query: 275 NGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL--DLLKGESKEKLTE 321
+ E L C P+KR ++L + LK SK+K T+
Sbjct: 244 HPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKKKKTQ 292
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 46 LGEGGFGSVYWGQLWDGSQ-IAVKRL-KVWSNKAEMEFAVEVEI--LARVRHKNLLSLRG 101
LGEG FG V + Q +A+K + + K++M VE EI L +RH +++ L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
+ ++V +Y E + RR I A I Y H H
Sbjct: 77 VITTPTDIVMVIEYAGGELFDYIVEKKRMTE---DEGRRFFQQIICA--IEYCHRHK--- 128
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGK--A 219
I+HRD+K N+LLD + ++ADFG + ++ DG T+ G+ Y APE + GK A
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VINGKLYA 185
Query: 220 SESCDVYSFGILLLELASGKKPIE---------KVNSAI 249
DV+S GI+L + G+ P + KVNS +
Sbjct: 186 GPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCV 224
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 45 KLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
K+G+G G+VY + G ++A++++ + + E+ ++ ++ N+++
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
G E +V +Y+ E ++ + + + + +LH + +I
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVT-----ETCMDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 164 HRDIKASNVLLDADFKAQVADFGF-AKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASES 222
HRDIK+ N+LL D ++ DFGF A++ P+ + T + GT ++APE
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPK 196
Query: 223 CDVYSFGILLLELASGKKP 241
D++S GI+ +E+ G+ P
Sbjct: 197 VDIWSLGIMAIEMIEGEPP 215
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 46 LGEGGFGSVYWGQLWDG----SQIAVKRLKV-WSNKAEMEFAVEVEILARVRHKNLLSLR 100
+G G FG V G+L S +A+K LK ++ + EF E I+ + H N++ L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
G +I+ ++M N ++ + + + G A G+ YL +
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGIASGMRYLAEMS-- 136
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRV----KGTLGYLAPEYAML 216
+HRD+ A N+L++++ +V+DFG ++ + + ++ T K + + APE
Sbjct: 137 -YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAF 195
Query: 217 GKASESCDVYSFGILLLELAS-GKKP 241
K + + D +S+GI++ E+ S G++P
Sbjct: 196 RKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 125/303 (41%), Gaps = 38/303 (12%)
Query: 46 LGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAE---MEFAVEVEILARVRHKNLLSL-- 99
LG GG V+ + L D +AVK L+ + + F E + A + H ++++
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 100 --RGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
G IV +Y+ E + R +++ + + + + H +
Sbjct: 80 TGEAETPAGPLPYIVMEYV----DGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN 135
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHV--TTRVKGTLGYLAPEYAM 215
IIHRD+K +N+++ A +V DFG A+ I D V T V GT YL+PE A
Sbjct: 136 G---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 216 LGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLN 275
DVYS G +L E+ +G+ P D + +A + + P
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTG----------DSPVSVAYQHVREDPIPPSAR 242
Query: 276 GNFVEEELKRVVLVALTCAHSKPEKR-PTMLEV-LDLLK---GESKEK---LTELENDEL 327
+ +L VVL AL PE R T E+ DL++ GE E LT+ E L
Sbjct: 243 HEGLSADLDAVVLKALA---KNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAERTSL 299
Query: 328 FKS 330
S
Sbjct: 300 LSS 302
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 114/238 (47%), Gaps = 20/238 (8%)
Query: 46 LGEGGFGSVYWGQL-WDGSQ---IAVKRLKV-WSNKAEMEFAVEVEILARVRHKNLLSLR 100
+G G FG V G L G + +A+K LK ++ K +F E I+ + H N++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
G + +I+ ++M N ++ + + + G A G+ YL A
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI---QLVGMLRGIAAGMKYL---ADM 128
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVT-TRVKG---TLGYLAPEYAML 216
+ +HR + A N+L++++ +V+DFG ++ + D + T T G + + APE
Sbjct: 129 NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 188
Query: 217 GKASESCDVYSFGILLLELAS-GKKPI-EKVNSAIKRTI-TDWAL--PLACERKFSEL 269
K + + DV+S+GI++ E+ S G++P + N + I D+ L P+ C +L
Sbjct: 189 RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQL 246
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 26/220 (11%)
Query: 39 NFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLK----VWSNKAEMEFAVEVEILARVRH 93
+F + LGEG F +V +L + A+K L+ + NK E ++++R+ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-VTRERDVMSRLDH 91
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD------IAIGS 147
+ L + ++ Y N CLL + R++ +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNG-------------CLLKYIRKIGSFDETCTRFYT 138
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PDGATHVTTRVKGTL 206
AE + L + IIHRD+K N+LL+ D Q+ DFG AK++ P+ GT
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 198
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVN 246
Y++PE AS+S D+++ G ++ +L +G P N
Sbjct: 199 QYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 118/279 (42%), Gaps = 36/279 (12%)
Query: 45 KLGEGGFGSVYWGQLWDGSQ-----IAVKRLK--VWSNKAEME-FAVEVEILARVRHKNL 96
KLG+G FG V G+ WD +AVK LK V S M+ F EV + + H+NL
Sbjct: 15 KLGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 97 LSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+ L G +++ + P L +R A+ AEG+ YL
Sbjct: 74 IRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSR---YAVQVAEGMGYLE- 128
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTR--VKGTLGYLAPEYA 214
+ IHRD+ A N+LL ++ DFG + +P H + K + APE
Sbjct: 129 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 215 MLGKASESCDVYSFGILLLELAS-GKKPIEKVN-SAIKRTITDWALPLACERKFSELADP 272
S + D + FG+ L E+ + G++P +N S I I +++ L P
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI---------DKEGERLPRP 237
Query: 273 RLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
E+ + + V + C KPE RPT + + D L
Sbjct: 238 -------EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 118/279 (42%), Gaps = 36/279 (12%)
Query: 45 KLGEGGFGSVYWGQLWDGSQ-----IAVKRLK--VWSNKAEME-FAVEVEILARVRHKNL 96
KLG+G FG V G+ WD +AVK LK V S M+ F EV + + H+NL
Sbjct: 25 KLGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 97 LSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+ L G +++ + P L +R A+ AEG+ YL
Sbjct: 84 IRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSR---YAVQVAEGMGYLE- 138
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTR--VKGTLGYLAPEYA 214
+ IHRD+ A N+LL ++ DFG + +P H + K + APE
Sbjct: 139 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 196
Query: 215 MLGKASESCDVYSFGILLLELAS-GKKPIEKVN-SAIKRTITDWALPLACERKFSELADP 272
S + D + FG+ L E+ + G++P +N S I I +++ L P
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI---------DKEGERLPRP 247
Query: 273 RLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
E+ + + V + C KPE RPT + + D L
Sbjct: 248 -------EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 279
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 118/279 (42%), Gaps = 36/279 (12%)
Query: 45 KLGEGGFGSVYWGQLWDGSQ-----IAVKRLK--VWSNKAEME-FAVEVEILARVRHKNL 96
KLG+G FG V G+ WD +AVK LK V S M+ F EV + + H+NL
Sbjct: 25 KLGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 97 LSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+ L G +++ + P L +R A+ AEG+ YL
Sbjct: 84 IRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSR---YAVQVAEGMGYLE- 138
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTR--VKGTLGYLAPEYA 214
+ IHRD+ A N+LL ++ DFG + +P H + K + APE
Sbjct: 139 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 196
Query: 215 MLGKASESCDVYSFGILLLELAS-GKKPIEKVN-SAIKRTITDWALPLACERKFSELADP 272
S + D + FG+ L E+ + G++P +N S I I +++ L P
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI---------DKEGERLPRP 247
Query: 273 RLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
E+ + + V + C KPE RPT + + D L
Sbjct: 248 -------EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 279
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 118/279 (42%), Gaps = 36/279 (12%)
Query: 45 KLGEGGFGSVYWGQLWDGSQ-----IAVKRLK--VWSNKAEME-FAVEVEILARVRHKNL 96
KLG+G FG V G+ WD +AVK LK V S M+ F EV + + H+NL
Sbjct: 19 KLGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 97 LSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+ L G +++ + P L +R A+ AEG+ YL
Sbjct: 78 IRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSR---YAVQVAEGMGYLE- 132
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTR--VKGTLGYLAPEYA 214
+ IHRD+ A N+LL ++ DFG + +P H + K + APE
Sbjct: 133 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 215 MLGKASESCDVYSFGILLLELAS-GKKPIEKVN-SAIKRTITDWALPLACERKFSELADP 272
S + D + FG+ L E+ + G++P +N S I I +++ L P
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI---------DKEGERLPRP 241
Query: 273 RLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
E+ + + V + C KPE RPT + + D L
Sbjct: 242 -------EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 273
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 118/279 (42%), Gaps = 36/279 (12%)
Query: 45 KLGEGGFGSVYWGQLWDGSQ-----IAVKRLK--VWSNKAEME-FAVEVEILARVRHKNL 96
KLG+G FG V G+ WD +AVK LK V S M+ F EV + + H+NL
Sbjct: 15 KLGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 97 LSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+ L G +++ + P L +R A+ AEG+ YL
Sbjct: 74 IRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSR---YAVQVAEGMGYLE- 128
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTR--VKGTLGYLAPEYA 214
+ IHRD+ A N+LL ++ DFG + +P H + K + APE
Sbjct: 129 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 215 MLGKASESCDVYSFGILLLELAS-GKKPIEKVN-SAIKRTITDWALPLACERKFSELADP 272
S + D + FG+ L E+ + G++P +N S I I +++ L P
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI---------DKEGERLPRP 237
Query: 273 RLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
E+ + + V + C KPE RPT + + D L
Sbjct: 238 -------EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 134/330 (40%), Gaps = 84/330 (25%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQLWD------GSQIAVKRLKVWSNKAEME-FAVEVEILAR 90
N ++ LG G FG V + +AVK LK ++ E E E+++L+
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 91 V-RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXEC---LLNWNRR------ 140
+ H N+++L G C G L++ +Y C LLN+ RR
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYC----------------CYGDLLNFLRRKRDSFI 142
Query: 141 ---------------------MDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFK 179
+ + A+G+ +L A+ + IHRD+ A N+LL
Sbjct: 143 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRI 199
Query: 180 AQVADFGFAKLIPDGATHVTTRVKGT----LGYLAPEYAMLGKASESCDVYSFGILLLE- 234
++ DFG A+ I + + +V VKG + ++APE + DV+S+GI L E
Sbjct: 200 TKICDFGLARDIKNDSNYV---VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 256
Query: 235 --LASGKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALT 292
L S P V+S + I + L+ E +E+ D + T
Sbjct: 257 FSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYD-----------------IMKT 299
Query: 293 CAHSKPEKRPTMLEVLDLLKGESKEKLTEL 322
C + P KRPT +++ L++ + E +
Sbjct: 300 CWDADPLKRPTFKQIVQLIEKQISESTNHI 329
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 118/279 (42%), Gaps = 36/279 (12%)
Query: 45 KLGEGGFGSVYWGQLWDGSQ-----IAVKRLK--VWSNKAEME-FAVEVEILARVRHKNL 96
KLG+G FG V G+ WD +AVK LK V S M+ F EV + + H+NL
Sbjct: 15 KLGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 97 LSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+ L G +++ + P L +R A+ AEG+ YL
Sbjct: 74 IRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSR---YAVQVAEGMGYLE- 128
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTR--VKGTLGYLAPEYA 214
+ IHRD+ A N+LL ++ DFG + +P H + K + APE
Sbjct: 129 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 186
Query: 215 MLGKASESCDVYSFGILLLELAS-GKKPIEKVN-SAIKRTITDWALPLACERKFSELADP 272
S + D + FG+ L E+ + G++P +N S I I +++ L P
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI---------DKEGERLPRP 237
Query: 273 RLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
E+ + + V + C KPE RPT + + D L
Sbjct: 238 -------EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 17/206 (8%)
Query: 46 LGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAE---MEFAVEVEILARVRHKNLLSL-- 99
LG GG V+ + L D +AVK L+ + + F E + A + H ++++
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 100 --RGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
G IV +Y+ E + R +++ + + + + H +
Sbjct: 80 TGEAETPAGPLPYIVMEYV----DGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN 135
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHV--TTRVKGTLGYLAPEYAM 215
IIHRD+K +N+++ A +V DFG A+ I D V T V GT YL+PE A
Sbjct: 136 G---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 216 LGKASESCDVYSFGILLLELASGKKP 241
DVYS G +L E+ +G+ P
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 10/222 (4%)
Query: 45 KLGEGGFGSVYWGQLW-DGSQIAVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLSLRGY 102
++G G FG V+ G+L D + +AVK + + +F E IL + H N++ L G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 103 CAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHI 162
C + Q IV + + L + + +A G+ YL
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRTEGAR---LRVKTLLQMVGDAAAGMEYLESKCC--- 234
Query: 163 IHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGT-LGYLAPEYAMLGKASE 221
IHRD+ A N L+ +++DFG ++ DG + ++ + + APE G+ S
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 222 SCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLAC 262
DV+SFGILL E S G P +++ R + L C
Sbjct: 295 ESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPC 336
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 16/206 (7%)
Query: 44 NKLGEGGFGSVYWGQ-LWDGSQIAVK---RLKVWSNKAEMEFAVEVEILARVRHKNLLSL 99
+ LG G FG V G+ G ++AVK R K+ S + E++ L RH +++ L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 100 RGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHAT 159
+ + +V +Y+ E + RR+ I SA + Y H H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM--EARRLFQQILSA--VDYCHRHM- 131
Query: 160 PHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGK- 218
++HRD+K NVLLDA A++ADFG + ++ DG T+ G+ Y APE + G+
Sbjct: 132 --VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNYAAPE-VISGRL 186
Query: 219 -ASESCDVYSFGILLLELASGKKPIE 243
A D++S G++L L G P +
Sbjct: 187 YAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 46 LGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCA 104
LG+G +G VY G+ L + +IA+K + ++ E+ + ++HKN++ G +
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 105 EGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD--IAIGS-----AEGIVYLHHH 157
E I + +P W D IG EG+ YLH +
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRS--------KWGPLKDNEQTIGFYTKQILEGLKYLHDN 127
Query: 158 ATPHIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAML 216
I+HRDIK NVL++ +++DFG +K + G T GTL Y+APE
Sbjct: 128 ---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDK 183
Query: 217 GK--ASESCDVYSFGILLLELASGKKPI 242
G ++ D++S G ++E+A+GK P
Sbjct: 184 GPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 134/330 (40%), Gaps = 84/330 (25%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQLWD------GSQIAVKRLKVWSNKAEME-FAVEVEILAR 90
N ++ LG G FG V + +AVK LK ++ E E E+++L+
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 91 V-RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXEC---LLNWNRR------ 140
+ H N+++L G C G L++ +Y C LLN+ RR
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYC----------------CYGDLLNFLRRKRDSFI 149
Query: 141 ---------------------MDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFK 179
+ + A+G+ +L A+ + IHRD+ A N+LL
Sbjct: 150 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRI 206
Query: 180 AQVADFGFAKLIPDGATHVTTRVKGT----LGYLAPEYAMLGKASESCDVYSFGILLLE- 234
++ DFG A+ I + + +V VKG + ++APE + DV+S+GI L E
Sbjct: 207 TKICDFGLARHIKNDSNYV---VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 263
Query: 235 --LASGKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALT 292
L S P V+S + I + L+ E +E+ D + T
Sbjct: 264 FSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYD-----------------IMKT 306
Query: 293 CAHSKPEKRPTMLEVLDLLKGESKEKLTEL 322
C + P KRPT +++ L++ + E +
Sbjct: 307 CWDADPLKRPTFKQIVQLIEKQISESTNHI 336
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 136/317 (42%), Gaps = 46/317 (14%)
Query: 27 IFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDG-------SQIAVKRL-KVWSNKAE 78
+F E A +LG+G FG VY G + G +++A+K + + S +
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 63
Query: 79 MEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPN---XXXXXXXXXXXXXECLL 135
+EF E ++ +++ L G ++GQ L++ + M +L
Sbjct: 64 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 123
Query: 136 ---NWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP 192
+ ++ + +A A+G+ YL+ + +HRD+ A N ++ DF ++ DFG + I
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 180
Query: 193 DGATHVTTRVKGTLG--YLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV-NSA 248
+ + KG L +++PE G + DV+SFG++L E+A+ ++P + + N
Sbjct: 181 E-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 239
Query: 249 IKRTITDWAL---PLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTML 305
+ R + + L P C EL C P+ RP+ L
Sbjct: 240 VLRFVMEGGLLDKPDNCPDMLFELMR--------------------MCWQYNPKMRPSFL 279
Query: 306 EVLDLLKGESKEKLTEL 322
E++ +K E + E+
Sbjct: 280 EIISSIKEEMEPGFREV 296
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 45 KLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
K+G+G G+VY + G ++A++++ + + E+ ++ ++ N+++
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
G E +V +Y+ E ++ + + + + +LH + +I
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVT-----ETCMDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 164 HRDIKASNVLLDADFKAQVADFGF-AKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASES 222
HRDIK+ N+LL D ++ DFGF A++ P+ + + + GT ++APE
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SEMVGTPYWMAPEVVTRKAYGPK 196
Query: 223 CDVYSFGILLLELASGKKP 241
D++S GI+ +E+ G+ P
Sbjct: 197 VDIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 45 KLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
K+G+G G+VY + G ++A++++ + + E+ ++ ++ N+++
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
G E +V +Y+ E ++ + + + + +LH + +I
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVT-----ETCMDEGQIAAVCRECLQALEFLHSN---QVI 139
Query: 164 HRDIKASNVLLDADFKAQVADFGF-AKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASES 222
HRDIK+ N+LL D ++ DFGF A++ P+ + + + GT ++APE
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVTRKAYGPK 197
Query: 223 CDVYSFGILLLELASGKKP 241
D++S GI+ +E+ G+ P
Sbjct: 198 VDIWSLGIMAIEMIEGEPP 216
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 19/212 (8%)
Query: 39 NFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRL--KVWSNKAEMEFAVEVEI--LARVRH 93
N+ LGEG FG V G ++A+K + KV + K++M+ +E EI L +RH
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLA-KSDMQGRIEREISYLRLLRH 72
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
+++ L E ++V +Y N E RR I SA + Y
Sbjct: 73 PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE---QEARRFFQQIISA--VEY 127
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEY 213
H H I+HRD+K N+LLD ++ADFG + ++ DG T+ G+ Y APE
Sbjct: 128 CHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE- 181
Query: 214 AMLGK--ASESCDVYSFGILLLELASGKKPIE 243
+ GK A DV+S G++L + + P +
Sbjct: 182 VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 45 KLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
K+G+G G+VY + G ++A++++ + + E+ ++ ++ N+++
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
G E +V +Y+ E ++ + + + + +LH + +I
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVT-----ETCMDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 164 HRDIKASNVLLDADFKAQVADFGF-AKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASES 222
HRDIK+ N+LL D ++ DFGF A++ P+ + + + GT ++APE
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVTRKAYGPK 196
Query: 223 CDVYSFGILLLELASGKKP 241
D++S GI+ +E+ G+ P
Sbjct: 197 VDIWSLGIMAIEMIEGEPP 215
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 10/222 (4%)
Query: 45 KLGEGGFGSVYWGQLW-DGSQIAVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLSLRGY 102
++G G FG V+ G+L D + +AVK + + +F E IL + H N++ L G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 103 CAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHI 162
C + Q IV + + L + + +A G+ YL
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRTEGAR---LRVKTLLQMVGDAAAGMEYLESKCC--- 234
Query: 163 IHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGT-LGYLAPEYAMLGKASE 221
IHRD+ A N L+ +++DFG ++ DG + ++ + + APE G+ S
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 222 SCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLAC 262
DV+SFGILL E S G P +++ R + L C
Sbjct: 295 ESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPC 336
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 19/212 (8%)
Query: 39 NFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRL--KVWSNKAEMEFAVEVEI--LARVRH 93
N+ LGEG FG V G ++A+K + KV + K++M+ +E EI L +RH
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLA-KSDMQGRIEREISYLRLLRH 63
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
+++ L E ++V +Y N E RR I SA + Y
Sbjct: 64 PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE---QEARRFFQQIISA--VEY 118
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEY 213
H H I+HRD+K N+LLD ++ADFG + ++ DG T+ G+ Y APE
Sbjct: 119 CHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE- 172
Query: 214 AMLGK--ASESCDVYSFGILLLELASGKKPIE 243
+ GK A DV+S G++L + + P +
Sbjct: 173 VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 19/212 (8%)
Query: 39 NFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRL--KVWSNKAEMEFAVEVEI--LARVRH 93
N+ LGEG FG V G ++A+K + KV + K++M+ +E EI L +RH
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLA-KSDMQGRIEREISYLRLLRH 73
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
+++ L E ++V +Y N E RR I SA + Y
Sbjct: 74 PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE---QEARRFFQQIISA--VEY 128
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEY 213
H H I+HRD+K N+LLD ++ADFG + ++ DG T+ G+ Y APE
Sbjct: 129 CHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE- 182
Query: 214 AMLGK--ASESCDVYSFGILLLELASGKKPIE 243
+ GK A DV+S G++L + + P +
Sbjct: 183 VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 134/330 (40%), Gaps = 84/330 (25%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQLWD------GSQIAVKRLKVWSNKAEME-FAVEVEILAR 90
N ++ LG G FG V + +AVK LK ++ E E E+++L+
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 91 V-RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXEC---LLNWNRR------ 140
+ H N+++L G C G L++ +Y C LLN+ RR
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYC----------------CYGDLLNFLRRKRDSFI 126
Query: 141 ---------------------MDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFK 179
+ + A+G+ +L A+ + IHRD+ A N+LL
Sbjct: 127 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRI 183
Query: 180 AQVADFGFAKLIPDGATHVTTRVKGT----LGYLAPEYAMLGKASESCDVYSFGILLLE- 234
++ DFG A+ I + + +V VKG + ++APE + DV+S+GI L E
Sbjct: 184 TKICDFGLARDIKNDSNYV---VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 240
Query: 235 --LASGKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALT 292
L S P V+S + I + L+ E +E+ D + T
Sbjct: 241 FSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYD-----------------IMKT 283
Query: 293 CAHSKPEKRPTMLEVLDLLKGESKEKLTEL 322
C + P KRPT +++ L++ + E +
Sbjct: 284 CWDADPLKRPTFKQIVQLIEKQISESTNHI 313
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 134/330 (40%), Gaps = 84/330 (25%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQLWD------GSQIAVKRLKVWSNKAEME-FAVEVEILAR 90
N ++ LG G FG V + +AVK LK ++ E E E+++L+
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 91 V-RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXEC---LLNWNRR------ 140
+ H N+++L G C G L++ +Y C LLN+ RR
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYC----------------CYGDLLNFLRRKRDSFI 149
Query: 141 ---------------------MDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFK 179
+ + A+G+ +L A+ + IHRD+ A N+LL
Sbjct: 150 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRI 206
Query: 180 AQVADFGFAKLIPDGATHVTTRVKGT----LGYLAPEYAMLGKASESCDVYSFGILLLE- 234
++ DFG A+ I + + +V VKG + ++APE + DV+S+GI L E
Sbjct: 207 TKICDFGLARDIKNDSNYV---VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 263
Query: 235 --LASGKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALT 292
L S P V+S + I + L+ E +E+ D + T
Sbjct: 264 FSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYD-----------------IMKT 306
Query: 293 CAHSKPEKRPTMLEVLDLLKGESKEKLTEL 322
C + P KRPT +++ L++ + E +
Sbjct: 307 CWDADPLKRPTFKQIVQLIEKQISESTNHI 336
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 134/330 (40%), Gaps = 84/330 (25%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQLWD------GSQIAVKRLKVWSNKAEME-FAVEVEILAR 90
N ++ LG G FG V + +AVK LK ++ E E E+++L+
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 91 V-RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXEC---LLNWNRR------ 140
+ H N+++L G C G L++ +Y C LLN+ RR
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYC----------------CYGDLLNFLRRKRDSFI 144
Query: 141 ---------------------MDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFK 179
+ + A+G+ +L A+ + IHRD+ A N+LL
Sbjct: 145 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRI 201
Query: 180 AQVADFGFAKLIPDGATHVTTRVKGT----LGYLAPEYAMLGKASESCDVYSFGILLLE- 234
++ DFG A+ I + + +V VKG + ++APE + DV+S+GI L E
Sbjct: 202 TKICDFGLARDIKNDSNYV---VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 258
Query: 235 --LASGKKPIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALT 292
L S P V+S + I + L+ E +E+ D + T
Sbjct: 259 FSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYD-----------------IMKT 301
Query: 293 CAHSKPEKRPTMLEVLDLLKGESKEKLTEL 322
C + P KRPT +++ L++ + E +
Sbjct: 302 CWDADPLKRPTFKQIVQLIEKQISESTNHI 331
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 19/212 (8%)
Query: 39 NFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRL--KVWSNKAEMEFAVEVEI--LARVRH 93
N+ LGEG FG V G ++A+K + KV + K++M+ +E EI L +RH
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLA-KSDMQGRIEREISYLRLLRH 67
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
+++ L E ++V +Y N E RR I SA + Y
Sbjct: 68 PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE---QEARRFFQQIISA--VEY 122
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEY 213
H H I+HRD+K N+LLD ++ADFG + ++ DG T+ G+ Y APE
Sbjct: 123 CHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE- 176
Query: 214 AMLGK--ASESCDVYSFGILLLELASGKKPIE 243
+ GK A DV+S G++L + + P +
Sbjct: 177 VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 44 NKLGEGGFGSVYWGQL-WDGSQIAVK---RLKVWSNKAEMEFAVEVEILARVRHKNLLSL 99
+ LG G FG V G+ G ++AVK R K+ S + E++ L RH +++ L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 100 RGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHAT 159
+ + +V +Y+ + +RR+ I S G+ Y H H
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYICKNGRLD--EKESRRLFQQILS--GVDYCHRHM- 136
Query: 160 PHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGK- 218
++HRD+K NVLLDA A++ADFG + ++ DG G+ Y APE + G+
Sbjct: 137 --VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRXSCGSPNYAAPE-VISGRL 191
Query: 219 -ASESCDVYSFGILLLELASGKKPIE 243
A D++S G++L L G P +
Sbjct: 192 YAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 118/268 (44%), Gaps = 28/268 (10%)
Query: 45 KLGEGGFGSVYWG-QLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
K+GEG G V + G Q+AVK + + + EV I+ +H N++ +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
G+E ++ +++ + LN + + + + YLH +I
Sbjct: 112 LVGEELWVLMEFLQGGALTDIVS-----QVRLNEEQIATVCEAVLQALAYLHAQG---VI 163
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRDIK+ ++LL D + +++DFGF I V GT ++APE +
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV-GTPYWMAPEVISRSLYATEV 222
Query: 224 DVYSFGILLLELASGKKPI--EKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEE 281
D++S GI+++E+ G+ P + A+KR + D P + K S P L +F+E
Sbjct: 223 DIWSLGIMVIEMVDGEPPYFSDSPVQAMKR-LRDSPPP---KLKNSHKVSPVLR-DFLER 277
Query: 282 ELKRVVLVALTCAHSKPEKRPTMLEVLD 309
L R P++R T E+LD
Sbjct: 278 MLVR-----------DPQERATAQELLD 294
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 25/233 (10%)
Query: 29 SLKELHSATNNFNYDN------KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEME-F 81
S+K+ T + N ++ +LG+G FG VY Q + S +A ++ ++ E+E +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 82 AVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRM 141
VE++ILA H N++ L I+ ++ E L ++
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQ 138
Query: 142 DIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTR 201
+ + + + YLH + IIHRD+KA N+L D ++ADFG + T R
Sbjct: 139 VVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSA----KNTRTIQR 191
Query: 202 ---VKGTLGYLAPEYAMLGKASE-----SCDVYSFGILLLELASGKKPIEKVN 246
GT ++APE M + + DV+S GI L+E+A + P ++N
Sbjct: 192 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELN 244
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 45 KLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
K+G+G G+VY + G ++A++++ + + E+ ++ ++ N+++
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
G E +V +Y+ E ++ + + + + +LH + +I
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVT-----ETCMDEGQIAAVCRECLQALEFLHSN---QVI 139
Query: 164 HRDIKASNVLLDADFKAQVADFGF-AKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASES 222
HR+IK+ N+LL D ++ DFGF A++ P+ + T + GT ++APE
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPK 197
Query: 223 CDVYSFGILLLELASGKKP 241
D++S GI+ +E+ G+ P
Sbjct: 198 VDIWSLGIMAIEMIEGEPP 216
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQLW--DGSQI----AVKRLK-VWSNKAEMEFAVEVEILAR 90
F LG G FG+VY G LW +G ++ A+K L+ S KA E E ++A
Sbjct: 12 TEFKKIKVLGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 70
Query: 91 VRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS--- 147
V + ++ L G C +LI MP CLL++ R IGS
Sbjct: 71 VDNPHVCRLLGICLTSTVQLIT-QLMP-------------FGCLLDYVREHKDNIGSQYL 116
Query: 148 -------AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTT 200
AEG+ YL ++HRD+ A NVL+ ++ DFG AKL+ GA
Sbjct: 117 LNWCVQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEY 171
Query: 201 RVKG---TLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+G + ++A E + + DV+S+G+ + EL + G KP + + ++
Sbjct: 172 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 223
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 136/317 (42%), Gaps = 46/317 (14%)
Query: 27 IFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDG-------SQIAVKRL-KVWSNKAE 78
++ E A +LG+G FG VY G + G +++A+K + + S +
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 72
Query: 79 MEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPN---XXXXXXXXXXXXXECLL 135
+EF E ++ +++ L G ++GQ L++ + M +L
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 132
Query: 136 ---NWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP 192
+ ++ + +A A+G+ YL+ + +HRD+ A N ++ DF ++ DFG + I
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 193 DGATHVTTRVKGTLG--YLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV-NSA 248
+ + KG L +++PE G + DV+SFG++L E+A+ ++P + + N
Sbjct: 190 E-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 248
Query: 249 IKRTITDWAL---PLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTML 305
+ R + + L P C EL C P+ RP+ L
Sbjct: 249 VLRFVMEGGLLDKPDNCPDMLFELMR--------------------MCWQYNPKMRPSFL 288
Query: 306 EVLDLLKGESKEKLTEL 322
E++ +K E + E+
Sbjct: 289 EIISSIKEEMEPGFREV 305
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 25/233 (10%)
Query: 29 SLKELHSATNNFNYDN------KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEME-F 81
S+K+ T + N ++ +LG+G FG VY Q + S +A ++ ++ E+E +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 82 AVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRM 141
VE++ILA H N++ L I+ ++ E L ++
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQ 138
Query: 142 DIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTR 201
+ + + + YLH + IIHRD+KA N+L D ++ADFG + T R
Sbjct: 139 VVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSA----KNTRXIQR 191
Query: 202 ---VKGTLGYLAPEYAMLGKASE-----SCDVYSFGILLLELASGKKPIEKVN 246
GT ++APE M + + DV+S GI L+E+A + P ++N
Sbjct: 192 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELN 244
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 136/317 (42%), Gaps = 46/317 (14%)
Query: 27 IFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDG-------SQIAVKRL-KVWSNKAE 78
++ E A +LG+G FG VY G + G +++A+K + + S +
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 62
Query: 79 MEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPN---XXXXXXXXXXXXXECLL 135
+EF E ++ +++ L G ++GQ L++ + M +L
Sbjct: 63 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 122
Query: 136 ---NWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP 192
+ ++ + +A A+G+ YL+ + +HRD+ A N ++ DF ++ DFG + I
Sbjct: 123 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 179
Query: 193 DGATHVTTRVKGTLG--YLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV-NSA 248
+ + KG L +++PE G + DV+SFG++L E+A+ ++P + + N
Sbjct: 180 E-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 238
Query: 249 IKRTITDWAL---PLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTML 305
+ R + + L P C EL C P+ RP+ L
Sbjct: 239 VLRFVMEGGLLDKPDNCPDMLFELMR--------------------MCWQYNPKMRPSFL 278
Query: 306 EVLDLLKGESKEKLTEL 322
E++ +K E + E+
Sbjct: 279 EIISSIKEEMEPGFREV 295
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 13/199 (6%)
Query: 45 KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVRHKNLLSLRGY 102
K+GEG +G VY + G +A+KR+++ + + E+ +L + H N++SL
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 103 CAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS-AEGIVYLHHHATPH 161
+ +V+++M + + ++ I + G+ + H H
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQ-----DSQIKIYLYQLLRGVAHCHQH---R 139
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKA-S 220
I+HRD+K N+L+++D ++ADFG A+ T V TL Y AP+ M K S
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYS 198
Query: 221 ESCDVYSFGILLLELASGK 239
S D++S G + E+ +GK
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 25/233 (10%)
Query: 29 SLKELHSATNNFNYDN------KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEME-F 81
S+K+ T + N ++ +LG+G FG VY Q + S +A ++ ++ E+E +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 82 AVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRM 141
VE++ILA H N++ L I+ ++ E L ++
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQ 138
Query: 142 DIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTR 201
+ + + + YLH + IIHRD+KA N+L D ++ADFG + T R
Sbjct: 139 VVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSA----KNTRXIQR 191
Query: 202 ---VKGTLGYLAPEYAMLGKASE-----SCDVYSFGILLLELASGKKPIEKVN 246
GT ++APE M + + DV+S GI L+E+A + P ++N
Sbjct: 192 RDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELN 244
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 13/199 (6%)
Query: 45 KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVRHKNLLSLRGY 102
K+GEG +G VY + G +A+KR+++ + + E+ +L + H N++SL
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 103 CAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS-AEGIVYLHHHATPH 161
+ +V+++M + + ++ I + G+ + H H
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQ-----DSQIKIYLYQLLRGVAHCHQH---R 139
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKA-S 220
I+HRD+K N+L+++D ++ADFG A+ T V TL Y AP+ M K S
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYS 198
Query: 221 ESCDVYSFGILLLELASGK 239
S D++S G + E+ +GK
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 136/317 (42%), Gaps = 46/317 (14%)
Query: 27 IFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDG-------SQIAVKRL-KVWSNKAE 78
++ E A +LG+G FG VY G + G +++A+K + + S +
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 66
Query: 79 MEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPN---XXXXXXXXXXXXXECLL 135
+EF E ++ +++ L G ++GQ L++ + M +L
Sbjct: 67 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 136 ---NWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP 192
+ ++ + +A A+G+ YL+ + +HRD+ A N ++ DF ++ DFG + I
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 183
Query: 193 DGATHVTTRVKGTLG--YLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV-NSA 248
+ + KG L +++PE G + DV+SFG++L E+A+ ++P + + N
Sbjct: 184 E-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 242
Query: 249 IKRTITDWAL---PLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTML 305
+ R + + L P C EL C P+ RP+ L
Sbjct: 243 VLRFVMEGGLLDKPDNCPDMLFELMR--------------------MCWQYNPKMRPSFL 282
Query: 306 EVLDLLKGESKEKLTEL 322
E++ +K E + E+
Sbjct: 283 EIISSIKEEMEPGFREV 299
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 136/317 (42%), Gaps = 46/317 (14%)
Query: 27 IFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDG-------SQIAVKRL-KVWSNKAE 78
++ E A +LG+G FG VY G + G +++A+K + + S +
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 65
Query: 79 MEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPN---XXXXXXXXXXXXXECLL 135
+EF E ++ +++ L G ++GQ L++ + M +L
Sbjct: 66 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 136 ---NWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP 192
+ ++ + +A A+G+ YL+ + +HRD+ A N ++ DF ++ DFG + I
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 182
Query: 193 DGATHVTTRVKGTLG--YLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV-NSA 248
+ + KG L +++PE G + DV+SFG++L E+A+ ++P + + N
Sbjct: 183 E-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 241
Query: 249 IKRTITDWAL---PLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTML 305
+ R + + L P C EL C P+ RP+ L
Sbjct: 242 VLRFVMEGGLLDKPDNCPDMLFELMR--------------------MCWQYNPKMRPSFL 281
Query: 306 EVLDLLKGESKEKLTEL 322
E++ +K E + E+
Sbjct: 282 EIISSIKEEMEPGFREV 298
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 136/317 (42%), Gaps = 46/317 (14%)
Query: 27 IFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDG-------SQIAVKRL-KVWSNKAE 78
++ E A +LG+G FG VY G + G +++A+K + + S +
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 72
Query: 79 MEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPN---XXXXXXXXXXXXXECLL 135
+EF E ++ +++ L G ++GQ L++ + M +L
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 132
Query: 136 ---NWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP 192
+ ++ + +A A+G+ YL+ + +HRD+ A N ++ DF ++ DFG + I
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 193 DGATHVTTRVKGTLG--YLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV-NSA 248
+ + KG L +++PE G + DV+SFG++L E+A+ ++P + + N
Sbjct: 190 E-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 248
Query: 249 IKRTITDWAL---PLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTML 305
+ R + + L P C EL C P+ RP+ L
Sbjct: 249 VLRFVMEGGLLDKPDNCPDMLFELMR--------------------MCWQYNPKMRPSFL 288
Query: 306 EVLDLLKGESKEKLTEL 322
E++ +K E + E+
Sbjct: 289 EIISSIKEEMEPGFREV 305
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 136/317 (42%), Gaps = 46/317 (14%)
Query: 27 IFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDG-------SQIAVKRL-KVWSNKAE 78
++ E A +LG+G FG VY G + G +++A+K + + S +
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 65
Query: 79 MEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPN---XXXXXXXXXXXXXECLL 135
+EF E ++ +++ L G ++GQ L++ + M +L
Sbjct: 66 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 136 ---NWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP 192
+ ++ + +A A+G+ YL+ + +HRD+ A N ++ DF ++ DFG + I
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 182
Query: 193 DGATHVTTRVKGTLG--YLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV-NSA 248
+ + KG L +++PE G + DV+SFG++L E+A+ ++P + + N
Sbjct: 183 E-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 241
Query: 249 IKRTITDWAL---PLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTML 305
+ R + + L P C EL C P+ RP+ L
Sbjct: 242 VLRFVMEGGLLDKPDNCPDMLFELMR--------------------MCWQYNPKMRPSFL 281
Query: 306 EVLDLLKGESKEKLTEL 322
E++ +K E + E+
Sbjct: 282 EIISSIKEEMEPGFREV 298
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 135/317 (42%), Gaps = 46/317 (14%)
Query: 27 IFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDG-------SQIAVKRL-KVWSNKAE 78
++ E A +LG+G FG VY G + G +++A+K + + S +
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 66
Query: 79 MEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPN---XXXXXXXXXXXXXECLL 135
+EF E ++ +++ L G ++GQ L++ + M +L
Sbjct: 67 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 136 ---NWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP 192
+ ++ + +A A+G+ YL+ + +HRD+ A N ++ DF ++ DFG + I
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIX 183
Query: 193 DGATHVTTRVKGTLG--YLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV-NSA 248
+ KG L +++PE G + DV+SFG++L E+A+ ++P + + N
Sbjct: 184 E-TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 242
Query: 249 IKRTITDWAL---PLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTML 305
+ R + + L P C EL C P+ RP+ L
Sbjct: 243 VLRFVMEGGLLDKPDNCPDMLFELMR--------------------MCWQYNPKMRPSFL 282
Query: 306 EVLDLLKGESKEKLTEL 322
E++ +K E + E+
Sbjct: 283 EIISSIKEEMEPGFREV 299
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 104/224 (46%), Gaps = 41/224 (18%)
Query: 46 LGEGGFGSVYWGQLW--DGSQI----AVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLS 98
LG G FG+VY G LW +G ++ A+K L+ S KA E E ++A V + ++
Sbjct: 33 LGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 91
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS----------A 148
L G C +LI MP CLL++ R IGS A
Sbjct: 92 LLGICLTSTVQLIT-QLMP-------------FGCLLDYVREHKDNIGSQYLLNWCVQIA 137
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---T 205
+G+ YL ++HRD+ A NVL+ ++ DFG AKL+ GA +G
Sbjct: 138 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 192
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+ ++A E + + DV+S+G+ + EL + G KP + + ++
Sbjct: 193 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 236
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 41/224 (18%)
Query: 46 LGEGGFGSVYWGQLW--DGSQI----AVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLS 98
LG G FG+VY G LW +G ++ A+K L+ S KA E E ++A V + ++
Sbjct: 24 LGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS----------A 148
L G C +LI+ MP CLL++ R IGS A
Sbjct: 83 LLGICLTSTVQLIM-QLMP-------------FGCLLDYVREHKDNIGSQYLLNWCVQIA 128
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---T 205
+G+ YL ++HRD+ A NVL+ ++ DFG AKL+ GA +G
Sbjct: 129 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 183
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+ ++A E + + DV+S+G+ + EL + G KP + + ++
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 227
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 41/224 (18%)
Query: 46 LGEGGFGSVYWGQLW--DGSQI----AVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLS 98
LG G FG+VY G LW +G ++ A+K L+ S KA E E ++A V + ++
Sbjct: 27 LGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS----------A 148
L G C +LI+ MP CLL++ R IGS A
Sbjct: 86 LLGICLTSTVQLIM-QLMP-------------FGCLLDYVREHKDNIGSQYLLNWCVQIA 131
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---T 205
+G+ YL ++HRD+ A NVL+ ++ DFG AKL+ GA +G
Sbjct: 132 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 186
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+ ++A E + + DV+S+G+ + EL + G KP + + ++
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 230
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 104/224 (46%), Gaps = 41/224 (18%)
Query: 46 LGEGGFGSVYWGQLW--DGSQI----AVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLS 98
LG G FG+VY G LW +G ++ A+K L+ S KA E E ++A V + ++
Sbjct: 48 LGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 106
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS----------A 148
L G C +LI MP CLL++ R IGS A
Sbjct: 107 LLGICLTSTVQLIT-QLMP-------------FGCLLDYVREHKDNIGSQYLLNWCVQIA 152
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---T 205
+G+ YL ++HRD+ A NVL+ ++ DFG AKL+ GA +G
Sbjct: 153 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 207
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+ ++A E + + DV+S+G+ + EL + G KP + + ++
Sbjct: 208 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 251
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 41/224 (18%)
Query: 46 LGEGGFGSVYWGQLW--DGSQI----AVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLS 98
LG G FG+VY G LW +G ++ A+K L+ S KA E E ++A V + ++
Sbjct: 23 LGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS----------A 148
L G C +LI+ MP CLL++ R IGS A
Sbjct: 82 LLGICLTSTVQLIM-QLMP-------------FGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---T 205
+G+ YL ++HRD+ A NVL+ ++ DFG AKL+ GA +G
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 182
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+ ++A E + + DV+S+G+ + EL + G KP + + ++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 226
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 41/224 (18%)
Query: 46 LGEGGFGSVYWGQLW--DGSQI----AVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLS 98
LG G FG+VY G LW +G ++ A+K L+ S KA E E ++A V + ++
Sbjct: 25 LGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS----------A 148
L G C +LI+ MP CLL++ R IGS A
Sbjct: 84 LLGICLTSTVQLIM-QLMP-------------FGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---T 205
+G+ YL ++HRD+ A NVL+ ++ DFG AKL+ GA +G
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 184
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+ ++A E + + DV+S+G+ + EL + G KP + + ++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 228
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 44 NKLGEGGFGSVYWGQ-LWDGSQIAVK---RLKVWSNKAEMEFAVEVEILARVRHKNLLSL 99
+ LG G FG V G+ G ++AVK R K+ S + E++ L RH +++ L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 100 RGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHAT 159
+ + +V +Y+ E + RR+ I SA + Y H H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM--EARRLFQQILSA--VDYCHRHM- 131
Query: 160 PHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGK- 218
++HRD+K NVLLDA A++ADFG + ++ DG G+ Y APE + G+
Sbjct: 132 --VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRDSCGSPNYAAPE-VISGRL 186
Query: 219 -ASESCDVYSFGILLLELASGKKPIE 243
A D++S G++L L G P +
Sbjct: 187 YAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 41/224 (18%)
Query: 46 LGEGGFGSVYWGQLW--DGSQI----AVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLS 98
LG G FG+VY G LW +G ++ A+K L+ S KA E E ++A V + ++
Sbjct: 26 LGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS----------A 148
L G C +LI+ MP CLL++ R IGS A
Sbjct: 85 LLGICLTSTVQLIM-QLMP-------------FGCLLDYVREHKDNIGSQYLLNWCVQIA 130
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---T 205
+G+ YL ++HRD+ A NVL+ ++ DFG AKL+ GA +G
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 185
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+ ++A E + + DV+S+G+ + EL + G KP + + ++
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 229
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 134/312 (42%), Gaps = 46/312 (14%)
Query: 32 ELHSATNNFNYDNKLGEGGFGSVYWGQLWDG-------SQIAVKRL-KVWSNKAEMEFAV 83
E A +LG+G FG VY G + G +++A+K + + S + +EF
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 84 EVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPN---XXXXXXXXXXXXXECLL---NW 137
E ++ +++ L G ++GQ L++ + M +L +
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 138 NRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATH 197
++ + +A A+G+ YL+ + +HRD+ A N ++ DF ++ DFG + I + +
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE-TDY 180
Query: 198 VTTRVKGTLG--YLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV-NSAIKRTI 253
KG L +++PE G + DV+SFG++L E+A+ ++P + + N + R +
Sbjct: 181 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 240
Query: 254 TDWAL---PLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDL 310
+ L P C EL C P+ RP+ LE++
Sbjct: 241 MEGGLLDKPDNCPDMLFELMR--------------------MCWQYNPKMRPSFLEIISS 280
Query: 311 LKGESKEKLTEL 322
+K E + E+
Sbjct: 281 IKEEMEPGFREV 292
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 136/317 (42%), Gaps = 46/317 (14%)
Query: 27 IFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDG-------SQIAVKRL-KVWSNKAE 78
++ E A +LG+G FG VY G + G +++A+K + + S +
Sbjct: 36 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 94
Query: 79 MEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPN---XXXXXXXXXXXXXECLL 135
+EF E ++ +++ L G ++GQ L++ + M +L
Sbjct: 95 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 154
Query: 136 ---NWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP 192
+ ++ + +A A+G+ YL+ + +HRD+ A N ++ DF ++ DFG + I
Sbjct: 155 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 211
Query: 193 DGATHVTTRVKGTLG--YLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV-NSA 248
+ + KG L +++PE G + DV+SFG++L E+A+ ++P + + N
Sbjct: 212 E-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 270
Query: 249 IKRTITDWAL---PLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTML 305
+ R + + L P C EL C P+ RP+ L
Sbjct: 271 VLRFVMEGGLLDKPDNCPDMLFELMR--------------------MCWQYNPKMRPSFL 310
Query: 306 EVLDLLKGESKEKLTEL 322
E++ +K E + E+
Sbjct: 311 EIISSIKEEMEPGFREV 327
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 104/224 (46%), Gaps = 41/224 (18%)
Query: 46 LGEGGFGSVYWGQLW--DGSQI----AVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLS 98
LG G FG+VY G LW +G ++ A+K L+ S KA E E ++A V + ++
Sbjct: 29 LGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 87
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS----------A 148
L G C +LI MP CLL++ R IGS A
Sbjct: 88 LLGICLTSTVQLIT-QLMP-------------FGCLLDYVREHKDNIGSQYLLNWCVQIA 133
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---T 205
+G+ YL ++HRD+ A NVL+ ++ DFG AKL+ GA +G
Sbjct: 134 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 188
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+ ++A E + + DV+S+G+ + EL + G KP + + ++
Sbjct: 189 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 232
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 115/260 (44%), Gaps = 48/260 (18%)
Query: 10 GKVSDRKEKGKKQPTWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLW--DGSQI-- 65
G + R + Q RI LKE F LG G FG+VY G LW +G ++
Sbjct: 1 GAMGIRSGEAPNQALLRI--LKE-----TEFKKIKVLGSGAFGTVYKG-LWIPEGEKVKI 52
Query: 66 --AVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXX 122
A+K L+ S KA E E ++A V + ++ L G C +LI MP
Sbjct: 53 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMP----- 106
Query: 123 XXXXXXXXXECLLNWNRRMDIAIGS----------AEGIVYLHHHATPHIIHRDIKASNV 172
CLL++ R IGS A+G+ YL ++HRD+ A NV
Sbjct: 107 --------FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 155
Query: 173 LLDADFKAQVADFGFAKLIPDGATHVTTRVKG---TLGYLAPEYAMLGKASESCDVYSFG 229
L+ ++ DFG AKL+ GA +G + ++A E + + DV+S+G
Sbjct: 156 LVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 213
Query: 230 ILLLELAS-GKKPIEKVNSA 248
+ + EL + G KP + + ++
Sbjct: 214 VTVWELMTFGSKPYDGIPAS 233
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 28/221 (12%)
Query: 39 NFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLK----VWSNKAEMEFAVEVEILARVRH 93
+F + LGEG F +V +L + A+K L+ + NK E ++++R+ H
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-VTRERDVMSRLDH 96
Query: 94 KNLLSLRGYCAEGQERLIV-YDYMPNXXXXXXXXXXXXXECLLNWNRRMD------IAIG 146
+ L +C + E+L Y N LL + R++
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGE-------------LLKYIRKIGSFDETCTRFY 142
Query: 147 SAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PDGATHVTTRVKGT 205
+AE + L + IIHRD+K N+LL+ D Q+ DFG AK++ P+ GT
Sbjct: 143 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVN 246
Y++PE A +S D+++ G ++ +L +G P N
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 243
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 104/224 (46%), Gaps = 41/224 (18%)
Query: 46 LGEGGFGSVYWGQLW--DGSQI----AVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLS 98
LG G FG+VY G LW +G ++ A+K L+ S KA E E ++A V + ++
Sbjct: 23 LGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS----------A 148
L G C +LI MP CLL++ R IGS A
Sbjct: 82 LLGICLTSTVQLIT-QLMP-------------FGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---T 205
+G+ YL ++HRD+ A NVL+ ++ DFG AKL+ GA +G
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 182
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+ ++A E + + DV+S+G+ + EL + G KP + + ++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 226
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 104/224 (46%), Gaps = 41/224 (18%)
Query: 46 LGEGGFGSVYWGQLW--DGSQI----AVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLS 98
LG G FG+VY G LW +G ++ A+K L+ S KA E E ++A V + ++
Sbjct: 25 LGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS----------A 148
L G C +LI MP CLL++ R IGS A
Sbjct: 84 LLGICLTSTVQLIT-QLMP-------------FGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---T 205
+G+ YL ++HRD+ A NVL+ ++ DFG AKL+ GA +G
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 184
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+ ++A E + + DV+S+G+ + EL + G KP + + ++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 228
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 104/224 (46%), Gaps = 41/224 (18%)
Query: 46 LGEGGFGSVYWGQLW--DGSQI----AVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLS 98
LG G FG+VY G LW +G ++ A+K L+ S KA E E ++A V + ++
Sbjct: 26 LGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS----------A 148
L G C +LI MP CLL++ R IGS A
Sbjct: 85 LLGICLTSTVQLIT-QLMP-------------FGCLLDYVREHKDNIGSQYLLNWCVQIA 130
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---T 205
+G+ YL ++HRD+ A NVL+ ++ DFG AKL+ GA +G
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 185
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+ ++A E + + DV+S+G+ + EL + G KP + + ++
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 229
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 104/224 (46%), Gaps = 41/224 (18%)
Query: 46 LGEGGFGSVYWGQLW--DGSQI----AVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLS 98
LG G FG+VY G LW +G ++ A+K L+ S KA E E ++A V + ++
Sbjct: 26 LGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS----------A 148
L G C +LI MP CLL++ R IGS A
Sbjct: 85 LLGICLTSTVQLIT-QLMP-------------FGCLLDYVREHKDNIGSQYLLNWCVQIA 130
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---T 205
+G+ YL ++HRD+ A NVL+ ++ DFG AKL+ GA +G
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 185
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+ ++A E + + DV+S+G+ + EL + G KP + + ++
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 229
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 104/224 (46%), Gaps = 41/224 (18%)
Query: 46 LGEGGFGSVYWGQLW--DGSQI----AVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLS 98
LG G FG+VY G LW +G ++ A+K L+ S KA E E ++A V + ++
Sbjct: 17 LGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 75
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS----------A 148
L G C +LI MP CLL++ R IGS A
Sbjct: 76 LLGICLTSTVQLIT-QLMP-------------FGCLLDYVREHKDNIGSQYLLNWCVQIA 121
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---T 205
+G+ YL ++HRD+ A NVL+ ++ DFG AKL+ GA +G
Sbjct: 122 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 176
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+ ++A E + + DV+S+G+ + EL + G KP + + ++
Sbjct: 177 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 220
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 104/224 (46%), Gaps = 41/224 (18%)
Query: 46 LGEGGFGSVYWGQLW--DGSQI----AVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLS 98
LG G FG+VY G LW +G ++ A+K L+ S KA E E ++A V + ++
Sbjct: 26 LGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS----------A 148
L G C +LI MP CLL++ R IGS A
Sbjct: 85 LLGICLTSTVQLIT-QLMP-------------FGCLLDYVREHKDNIGSQYLLNWCVQIA 130
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---T 205
+G+ YL ++HRD+ A NVL+ ++ DFG AKL+ GA +G
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 185
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+ ++A E + + DV+S+G+ + EL + G KP + + ++
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 229
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 133/312 (42%), Gaps = 46/312 (14%)
Query: 32 ELHSATNNFNYDNKLGEGGFGSVYWGQLWDG-------SQIAVKRL-KVWSNKAEMEFAV 83
E A +LG+G FG VY G + G +++A+K + + S + +EF
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 84 EVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPN---XXXXXXXXXXXXXECLL---NW 137
E ++ +++ L G ++GQ L++ + M +L +
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 138 NRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATH 197
++ + +A A+G+ YL+ + +HRD+ A N ++ DF ++ DFG + I +
Sbjct: 123 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE-TDX 178
Query: 198 VTTRVKGTLG--YLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV-NSAIKRTI 253
KG L +++PE G + DV+SFG++L E+A+ ++P + + N + R +
Sbjct: 179 XRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 238
Query: 254 TDWAL---PLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDL 310
+ L P C EL C P+ RP+ LE++
Sbjct: 239 MEGGLLDKPDNCPDMLLELMR--------------------MCWQYNPKMRPSFLEIISS 278
Query: 311 LKGESKEKLTEL 322
+K E + E+
Sbjct: 279 IKEEMEPGFREV 290
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQLW--DGSQI----AVKRLK-VWSNKAEMEFAVEVEILAR 90
F LG G FG+VY G LW +G ++ A+K L+ S KA E E ++A
Sbjct: 15 TEFKKIKVLGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 73
Query: 91 VRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS--- 147
V + ++ L G C +LI MP CLL++ R IGS
Sbjct: 74 VDNPHVCRLLGICLTSTVQLIT-QLMP-------------FGCLLDYVREHKDNIGSQYL 119
Query: 148 -------AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTT 200
A+G+ YL ++HRD+ A NVL+ ++ DFG AKL+ GA
Sbjct: 120 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEY 174
Query: 201 RVKG---TLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+G + ++A E + + DV+S+G+ + EL + G KP + + ++
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 226
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 132 ECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI 191
E + R +++ + + + + H + IIHRD+K +N+++ A +V DFG A+ I
Sbjct: 110 EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAI 166
Query: 192 PDGATHV--TTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAI 249
D V T V GT YL+PE A DVYS G +L E+ +G+ P
Sbjct: 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG----- 221
Query: 250 KRTITDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKR-PTMLEV- 307
D + +A + + P + +L VVL AL PE R T E+
Sbjct: 222 -----DSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALA---KNPENRYQTAAEMR 273
Query: 308 LDLLK---GESKEK---LTELENDELFKS 330
DL++ GE E LT+ E L S
Sbjct: 274 ADLVRVHNGEPPEAPKVLTDAERTSLLSS 302
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 132 ECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI 191
E + R +++ + + + + H + IIHRD+K +N+++ A +V DFG A+ I
Sbjct: 110 EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAI 166
Query: 192 PDGATHV--TTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAI 249
D V T V GT YL+PE A DVYS G +L E+ +G+ P
Sbjct: 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG----- 221
Query: 250 KRTITDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKR-PTMLEV- 307
D + +A + + P + +L VVL AL PE R T E+
Sbjct: 222 -----DSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALA---KNPENRYQTAAEMR 273
Query: 308 LDLLK---GESKEK---LTELENDELFKS 330
DL++ GE E LT+ E L S
Sbjct: 274 ADLVRVHNGEPPEAPKVLTDAERTSLLSS 302
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 14/200 (7%)
Query: 45 KLGEGGFGSVYWG-QLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
K+GEG G V + G Q+AVK++ + + EV I+ H N++ +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
G E +V +++ +N + + + + YLH+ +I
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIATVCLSVLRALSYLHNQG---VI 163
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTR--VKGTLGYLAPEYAMLGKASE 221
HRDIK+ ++LL +D + +++DFGF + + V R + GT ++APE
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFCAQV---SKEVPKRKXLVGTPYWMAPEVISRLPYGT 220
Query: 222 SCDVYSFGILLLELASGKKP 241
D++S GI+++E+ G+ P
Sbjct: 221 EVDIWSLGIMVIEMIDGEPP 240
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKAS 220
I++RD+K N+LLD +++D G A +P+G T + RV GT+GY+APE + +
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVVKNERYT 363
Query: 221 ESCDVYSFGILLLELASGKKPIEKVNSAIKR 251
S D ++ G LL E+ +G+ P ++ IKR
Sbjct: 364 FSPDWWALGCLLYEMIAGQSPFQQRKKKIKR 394
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKAS 220
I++RD+K N+LLD +++D G A +P+G T + RV GT+GY+APE + +
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVVKNERYT 363
Query: 221 ESCDVYSFGILLLELASGKKPIEKVNSAIKR 251
S D ++ G LL E+ +G+ P ++ IKR
Sbjct: 364 FSPDWWALGCLLYEMIAGQSPFQQRKKKIKR 394
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 112/271 (41%), Gaps = 25/271 (9%)
Query: 33 LHSATNNFNYDNKLGEGGFGSVY------WGQLWDGSQIAVKRLKVWSNKAEMEFAVEVE 86
+H N+F+ +G GGFG VY G+++ + KR+K+ + E E
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM--KQGETLALNERI 240
Query: 87 ILARVRHKN--LLSLRGYCAEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
+L+ V + + Y ++L + D M D+
Sbjct: 241 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS-------EADM 293
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVK 203
+AE I+ L H +++RD+K +N+LLD +++D G A H +
Sbjct: 294 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 350
Query: 204 GTLGYLAPEYAMLGKASE-SCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLAC 262
GT GY+APE G A + S D +S G +L +L G P + + K I L +A
Sbjct: 351 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 410
Query: 263 ERKFSELADPRLNGNFVEEELKRVVLVALTC 293
E + P L + +E L+R V L C
Sbjct: 411 E--LPDSFSPELR-SLLEGLLQRDVNRRLGC 438
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 112/271 (41%), Gaps = 25/271 (9%)
Query: 33 LHSATNNFNYDNKLGEGGFGSVY------WGQLWDGSQIAVKRLKVWSNKAEMEFAVEVE 86
+H N+F+ +G GGFG VY G+++ + KR+K+ + E E
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM--KQGETLALNERI 241
Query: 87 ILARVRHKN--LLSLRGYCAEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
+L+ V + + Y ++L + D M D+
Sbjct: 242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS-------EADM 294
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVK 203
+AE I+ L H +++RD+K +N+LLD +++D G A H +
Sbjct: 295 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 204 GTLGYLAPEYAMLGKASE-SCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLAC 262
GT GY+APE G A + S D +S G +L +L G P + + K I L +A
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 411
Query: 263 ERKFSELADPRLNGNFVEEELKRVVLVALTC 293
E + P L + +E L+R V L C
Sbjct: 412 E--LPDSFSPELR-SLLEGLLQRDVNRRLGC 439
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 41/224 (18%)
Query: 46 LGEGGFGSVYWGQLW--DGSQI----AVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLS 98
LG G FG+VY G LW +G ++ A+K L+ S KA E E ++A V + ++
Sbjct: 25 LGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS----------A 148
L G C +LI+ MP CLL++ R IGS A
Sbjct: 84 LLGICLTSTVQLIM-QLMP-------------FGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---T 205
+G+ YL ++HRD+ A NVL+ ++ DFG AKL+ GA +G
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGKVP 184
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+ ++A E + + DV+S+G+ + EL + G KP + + ++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 228
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 41/224 (18%)
Query: 46 LGEGGFGSVYWGQLW--DGSQI----AVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLS 98
LG G FG+VY G LW +G ++ A+K L+ S KA E E ++A V + ++
Sbjct: 27 LGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS----------A 148
L G C +LI+ MP CLL++ R IGS A
Sbjct: 86 LLGICLTSTVQLIM-QLMP-------------FGCLLDYVREHKDNIGSQYLLNWCVQIA 131
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---T 205
+G+ YL ++HRD+ A NVL+ ++ DFG AKL+ GA +G
Sbjct: 132 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGKVP 186
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+ ++A E + + DV+S+G+ + EL + G KP + + ++
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 230
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 41/224 (18%)
Query: 46 LGEGGFGSVYWGQLW--DGSQI----AVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLS 98
LG G FG+VY G LW +G ++ A+K L+ S KA E E ++A V + ++
Sbjct: 25 LGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS----------A 148
L G C +LI+ MP CLL++ R IGS A
Sbjct: 84 LLGICLTSTVQLIM-QLMP-------------FGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---T 205
+G+ YL ++HRD+ A NVL+ ++ DFG AKL+ GA +G
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGKVP 184
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+ ++A E + + DV+S+G+ + EL + G KP + + ++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 228
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 112/271 (41%), Gaps = 25/271 (9%)
Query: 33 LHSATNNFNYDNKLGEGGFGSVY------WGQLWDGSQIAVKRLKVWSNKAEMEFAVEVE 86
+H N+F+ +G GGFG VY G+++ + KR+K+ + E E
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM--KQGETLALNERI 241
Query: 87 ILARVRHKN--LLSLRGYCAEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
+L+ V + + Y ++L + D M D+
Sbjct: 242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS-------EADM 294
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVK 203
+AE I+ L H +++RD+K +N+LLD +++D G A H +
Sbjct: 295 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 204 GTLGYLAPEYAMLGKASE-SCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLAC 262
GT GY+APE G A + S D +S G +L +L G P + + K I L +A
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 411
Query: 263 ERKFSELADPRLNGNFVEEELKRVVLVALTC 293
E + P L + +E L+R V L C
Sbjct: 412 E--LPDSFSPELR-SLLEGLLQRDVNRRLGC 439
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 112/271 (41%), Gaps = 25/271 (9%)
Query: 33 LHSATNNFNYDNKLGEGGFGSVY------WGQLWDGSQIAVKRLKVWSNKAEMEFAVEVE 86
+H N+F+ +G GGFG VY G+++ + KR+K+ + E E
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM--KQGETLALNERI 241
Query: 87 ILARVRHKN--LLSLRGYCAEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
+L+ V + + Y ++L + D M D+
Sbjct: 242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS-------EADM 294
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVK 203
+AE I+ L H +++RD+K +N+LLD +++D G A H +
Sbjct: 295 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 204 GTLGYLAPEYAMLGKASE-SCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLAC 262
GT GY+APE G A + S D +S G +L +L G P + + K I L +A
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 411
Query: 263 ERKFSELADPRLNGNFVEEELKRVVLVALTC 293
E + P L + +E L+R V L C
Sbjct: 412 E--LPDSFSPELR-SLLEGLLQRDVNRRLGC 439
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 135/317 (42%), Gaps = 46/317 (14%)
Query: 27 IFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDG-------SQIAVKRL-KVWSNKAE 78
++ E A +LG+G FG VY G + G +++A+K + + S +
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 59
Query: 79 MEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPN---XXXXXXXXXXXXXECLL 135
+EF E ++ +++ L G ++GQ L++ + M +L
Sbjct: 60 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 136 ---NWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP 192
+ ++ + +A A+G+ YL+ + +HRD+ A N + DF ++ DFG + I
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIY 176
Query: 193 DGATHVTTRVKGTLG--YLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV-NSA 248
+ + KG L +++PE G + DV+SFG++L E+A+ ++P + + N
Sbjct: 177 E-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 235
Query: 249 IKRTITDWAL---PLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTML 305
+ R + + L P C EL C P+ RP+ L
Sbjct: 236 VLRFVMEGGLLDKPDNCPDMLLELMR--------------------MCWQYNPKMRPSFL 275
Query: 306 EVLDLLKGESKEKLTEL 322
E++ +K E + E+
Sbjct: 276 EIISSIKEEMEPGFREV 292
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 104/224 (46%), Gaps = 41/224 (18%)
Query: 46 LGEGGFGSVYWGQLW--DGSQI----AVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLS 98
LG G FG+VY G LW +G ++ A+K L+ S KA E E ++A V + ++
Sbjct: 25 LGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS----------A 148
L G C +LI MP CLL++ R IGS A
Sbjct: 84 LLGICLTSTVQLIT-QLMP-------------FGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---T 205
+G+ YL ++HRD+ A NVL+ ++ DFG AKL+ GA +G
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGKVP 184
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+ ++A E + + DV+S+G+ + EL + G KP + + ++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 228
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRLK----VWSNKAEMEFAVEVEILARVR 92
+FN+ LG+G FG V + ++ AVK LK + + E VE +LA
Sbjct: 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTM-VEKRVLALPG 399
Query: 93 HKNLLSLRGYCAEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
L+ C + +RL V +Y+ + +IAIG +
Sbjct: 400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG----L 455
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKL-IPDGATHVTTRVKGTLGYLA 210
+L II+RD+K NV+LD++ ++ADFG K I DG T T GT Y+A
Sbjct: 456 FFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIA 510
Query: 211 PEYAMLGKASESCDVYSFGILLLELASGKKPIE 243
PE +S D ++FG+LL E+ +G+ P E
Sbjct: 511 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 115/260 (44%), Gaps = 48/260 (18%)
Query: 10 GKVSDRKEKGKKQPTWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLW--DGSQI-- 65
G + R + Q RI LKE F LG G FG+VY G LW +G ++
Sbjct: 1 GAMGIRSGEAPNQALLRI--LKE-----TEFKKIKVLGSGAFGTVYKG-LWIPEGEKVKI 52
Query: 66 --AVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXX 122
A+K L+ S KA E E ++A V + ++ L G C +LI MP
Sbjct: 53 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMP----- 106
Query: 123 XXXXXXXXXECLLNWNRRMDIAIGS----------AEGIVYLHHHATPHIIHRDIKASNV 172
CLL++ R IGS A+G+ YL ++HRD+ A NV
Sbjct: 107 --------FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 155
Query: 173 LLDADFKAQVADFGFAKLIPDGATHVTTRVKG---TLGYLAPEYAMLGKASESCDVYSFG 229
L+ ++ DFG AKL+ GA +G + ++A E + + DV+S+G
Sbjct: 156 LVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 213
Query: 230 ILLLELAS-GKKPIEKVNSA 248
+ + EL + G KP + + ++
Sbjct: 214 VTVWELMTFGSKPYDGIPAS 233
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 104/224 (46%), Gaps = 41/224 (18%)
Query: 46 LGEGGFGSVYWGQLW--DGSQI----AVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLS 98
LG G FG+VY G LW +G ++ A+K L+ S KA E E ++A V + ++
Sbjct: 23 LGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS----------A 148
L G C +LI MP CLL++ R IGS A
Sbjct: 82 LLGICLTSTVQLIT-QLMP-------------FGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---T 205
+G+ YL ++HRD+ A NVL+ ++ DFG AKL+ GA +G
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGKVP 182
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+ ++A E + + DV+S+G+ + EL + G KP + + ++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 226
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 29/216 (13%)
Query: 45 KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEME-FAVEVEILARVRHKNLLSLRGYC 103
+LG+G FG VY + + +A ++ ++ E+E + VE+EILA H ++ L G
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRM---DIAIGSAEGIVYLHHHATP 160
+ I+ ++ P +L +R + I + + + L+ +
Sbjct: 86 YHDGKLWIMIEFCPGGAVDA---------IMLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVK-----GTLGYLAPEYAM 215
IIHRD+KA NVL+ + ++ADFG + A ++ T K GT ++APE M
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVS------AKNLKTLQKRDSFIGTPYWMAPEVVM 190
Query: 216 LGKASES-----CDVYSFGILLLELASGKKPIEKVN 246
++ D++S GI L+E+A + P ++N
Sbjct: 191 CETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN 226
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 29/216 (13%)
Query: 45 KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEME-FAVEVEILARVRHKNLLSLRGYC 103
+LG+G FG VY + + +A ++ ++ E+E + VE+EILA H ++ L G
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRM---DIAIGSAEGIVYLHHHATP 160
+ I+ ++ P +L +R + I + + + L+ +
Sbjct: 78 YHDGKLWIMIEFCPGGAVDA---------IMLELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVK-----GTLGYLAPEYAM 215
IIHRD+KA NVL+ + ++ADFG + A ++ T K GT ++APE M
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVS------AKNLKTLQKRDSFIGTPYWMAPEVVM 182
Query: 216 LGKASES-----CDVYSFGILLLELASGKKPIEKVN 246
++ D++S GI L+E+A + P ++N
Sbjct: 183 CETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN 218
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 22/231 (9%)
Query: 20 KKQPTWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRLK----VWS 74
+KQP+ + +K +FN+ LG+G FG V ++ A+K LK +
Sbjct: 6 RKQPSNNLDRVK-----LTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQD 60
Query: 75 NKAEMEFAVEVEILARVRHKNLLSLRGYCAEGQERL-IVYDYMPNXXXXXXXXXXXXXEC 133
+ E VE +LA + L+ C + +RL V +Y+ +
Sbjct: 61 DDVECTM-VEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKE 119
Query: 134 LLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAK-LIP 192
+I+I G+ +LH II+RD+K NV+LD++ ++ADFG K +
Sbjct: 120 PQAVFYAAEISI----GLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMM 172
Query: 193 DGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIE 243
DG T T GT Y+APE +S D +++G+LL E+ +G+ P +
Sbjct: 173 DGVT--TREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGY 208
+G+ YLH IHRDIKA+NVLL + ++ADFG A + D T V GT +
Sbjct: 115 KGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFW 170
Query: 209 LAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERKFSE 268
+APE D++S GI +ELA G+ P +++ P+ +
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH------------PMKVLFLIPK 218
Query: 269 LADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
P L GN+ + LK V C + +P RPT E+L
Sbjct: 219 NNPPTLEGNY-SKPLKEFVEA---CLNKEPSFRPTAKELL 254
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQLWDGSQ----IAVKRLKVWSNKAE--MEFAVEVEILARV 91
+ F LG+G FG V+ + GS A+K LK + K + +E +IL V
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 92 RHKNLLSLR-GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEG 150
H ++ L + EG+ LI+ D++ E + D+ AE
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLIL-DFL----RGGDLFTRLSKEVMFTEE---DVKFYLAEL 135
Query: 151 IVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLA 210
+ L H + II+RD+K N+LLD + ++ DFG +K D + GT+ Y+A
Sbjct: 136 ALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMA 194
Query: 211 PEYAMLGKASESCDVYSFGILLLELASGKKPIE 243
PE ++S D +SFG+L+ E+ +G P +
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 35 SATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLKVWSNKAEMEFAV-EVEILARVR 92
S+++ F KLG G + +VY G G +A+K +K+ S + A+ E+ ++ ++
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 93 HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS----- 147
H+N++ L + +V+++M N + N R +++ +
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDS-----RTVGNTPRGLELNLVKYFQWQ 116
Query: 148 -AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTL 206
+G+ + H + I+HRD+K N+L++ + ++ DFG A+ ++ V TL
Sbjct: 117 LLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TL 172
Query: 207 GYLAPEYAMLGKA-SESCDVYSFGILLLELASGKKPIEKVN 246
Y AP+ M + S S D++S G +L E+ +GK N
Sbjct: 173 WYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN 213
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 91/203 (44%), Gaps = 18/203 (8%)
Query: 49 GGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCAEGQE 108
G FG V+ QL + +AVK + +K + EV L ++H+N+L G AE +
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPI-QDKQSWQNEYEVYSLPGMKHENILQFIG--AEKRG 90
Query: 109 RLIVYD-YMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHAT-------P 160
+ D ++ +++WN IA A G+ YLH P
Sbjct: 91 TSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKP 150
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVK-GTLGYLAPEYA----- 214
I HRDIK+ NVLL + A +ADFG A G + T + GT Y+APE
Sbjct: 151 AISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAIN 210
Query: 215 MLGKASESCDVYSFGILLLELAS 237
A D+Y+ G++L ELAS
Sbjct: 211 FQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRLK----VWSNKAEMEFAVEVEILARVR 92
+FN+ LG+G FG V + ++ AVK LK + + E VE +LA
Sbjct: 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECT-MVEKRVLALPG 78
Query: 93 HKNLLSLRGYCAEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
L+ C + +RL V +Y+ + +IAIG +
Sbjct: 79 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG----L 134
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKL-IPDGATHVTTRVKGTLGYLA 210
+L II+RD+K NV+LD++ ++ADFG K I DG T T GT Y+A
Sbjct: 135 FFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIA 189
Query: 211 PEYAMLGKASESCDVYSFGILLLELASGKKPIE 243
PE +S D ++FG+LL E+ +G+ P E
Sbjct: 190 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 132 ECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI 191
E + R +++ + + + + H + IIHRD+K +N+++ A +V DFG A+ I
Sbjct: 127 EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAI 183
Query: 192 PDGATHV--TTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKP 241
D V T V GT YL+PE A DVYS G +L E+ +G+ P
Sbjct: 184 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 41/232 (17%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQLW--DGSQI----AVKRLK-VWSNKAEMEFAVEVEILAR 90
F LG G FG+VY G LW +G ++ A+ L+ S KA E E ++A
Sbjct: 49 TEFKKIKVLGSGAFGTVYKG-LWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMAS 107
Query: 91 VRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS--- 147
V + ++ L G C +LI MP CLL++ R IGS
Sbjct: 108 VDNPHVCRLLGICLTSTVQLIT-QLMP-------------FGCLLDYVREHKDNIGSQYL 153
Query: 148 -------AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTT 200
A+G+ YL ++HRD+ A NVL+ ++ DFG AKL+ GA
Sbjct: 154 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEY 208
Query: 201 RVKG---TLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+G + ++A E + + DV+S+G+ + EL + G KP + + ++
Sbjct: 209 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 260
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 46 LGEGGFGSVYWGQLW--DGSQI----AVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLS 98
LG G FG+VY G LW +G ++ A+K L+ S KA E E ++A V + ++
Sbjct: 24 LGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXX---XXXXECLLNWNRRMDIAIGSAEGIVYLH 155
L G C +LI+ MP + LLNW + A+G+ YL
Sbjct: 83 LLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 135
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---TLGYLAPE 212
++HRD+ A NVL+ ++ DFG AKL+ GA +G + ++A E
Sbjct: 136 DR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMALE 190
Query: 213 YAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+ + DV+S+G+ + EL + G KP + + ++
Sbjct: 191 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 227
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGY 208
+G+ YLH IHRDIKA+NVLL + ++ADFG A + D T V GT +
Sbjct: 135 KGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFW 190
Query: 209 LAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERKFSE 268
+APE D++S GI +ELA G+ P +++ P+ +
Sbjct: 191 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH------------PMKVLFLIPK 238
Query: 269 LADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
P L GN+ + LK V C + +P RPT E+L
Sbjct: 239 NNPPTLEGNY-SKPLKEFVEA---CLNKEPSFRPTAKELL 274
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQLWDGSQ----IAVKRLKVWSNKAE--MEFAVEVEILARV 91
+ F LG+G FG V+ + GS A+K LK + K + +E +IL V
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 92 RHKNLLSLR-GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEG 150
H ++ L + EG+ LI+ D++ E + D+ AE
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLIL-DFLRGGDLFTRLSK----EVMFTEE---DVKFYLAEL 136
Query: 151 IVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLA 210
+ L H + II+RD+K N+LLD + ++ DFG +K D + GT+ Y+A
Sbjct: 137 ALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMA 195
Query: 211 PEYAMLGKASESCDVYSFGILLLELASGKKPIE 243
PE ++S D +SFG+L+ E+ +G P +
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 228
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 115/260 (44%), Gaps = 48/260 (18%)
Query: 10 GKVSDRKEKGKKQPTWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLW--DGSQI-- 65
G + R + Q RI LKE F L G FG+VY G LW +G ++
Sbjct: 1 GAMGIRSGEAPNQALLRI--LKE-----TEFKKIKVLSSGAFGTVYKG-LWIPEGEKVKI 52
Query: 66 --AVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXX 122
A+K L+ S KA E E ++A V + ++ L G C +LI+ MP
Sbjct: 53 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMP----- 106
Query: 123 XXXXXXXXXECLLNWNRRMDIAIGS----------AEGIVYLHHHATPHIIHRDIKASNV 172
CLL++ R IGS A+G+ YL ++HRD+ A NV
Sbjct: 107 --------FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 155
Query: 173 LLDADFKAQVADFGFAKLIPDGATHVTTRVKG---TLGYLAPEYAMLGKASESCDVYSFG 229
L+ ++ DFG AKL+ GA +G + ++A E + + DV+S+G
Sbjct: 156 LVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 213
Query: 230 ILLLELAS-GKKPIEKVNSA 248
+ + EL + G KP + + ++
Sbjct: 214 VTVWELMTFGSKPYDGIPAS 233
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQLWDGSQ----IAVKRLKVWSNKAE--MEFAVEVEILARV 91
+ F LG+G FG V+ + GS A+K LK + K + +E +IL V
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 92 RHKNLLSLR-GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEG 150
H ++ L + EG+ LI+ D++ E + D+ AE
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLIL-DFLRGGDLFTRLSK----EVMFTEE---DVKFYLAEL 135
Query: 151 IVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLA 210
+ L H + II+RD+K N+LLD + ++ DFG +K D + GT+ Y+A
Sbjct: 136 ALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMA 194
Query: 211 PEYAMLGKASESCDVYSFGILLLELASGKKPIE 243
PE ++S D +SFG+L+ E+ +G P +
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 27/217 (12%)
Query: 46 LGEGGFGSVYWGQLW--DGSQI----AVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLS 98
LG G FG+VY G LW +G ++ A+K L+ S KA E E ++A V + ++
Sbjct: 23 LGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXX---XXXXECLLNWNRRMDIAIGSAEGIVYLH 155
L G C +LI MP + LLNW + A+G+ YL
Sbjct: 82 LLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 134
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---TLGYLAPE 212
++HRD+ A NVL+ ++ DFG AKL+ GA +G + ++A E
Sbjct: 135 DR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMALE 189
Query: 213 YAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+ + DV+S+G+ + EL + G KP + + ++
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 226
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 96/219 (43%), Gaps = 19/219 (8%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWD-GSQIAVKRLK--VWSNKAEMEFAV-EVEILARV 91
+NF + LG+G FG V ++ + G AVK LK V ++E + E IL+
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIA---IGSA 148
R+ L+ C + +RL N + +RR D A +A
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFH---------IQKSRRFDEARARFYAA 131
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKL-IPDGATHVTTRVKGTLG 207
E I L II+RD+K NVLLD + ++ADFG K I +G T T GT
Sbjct: 132 EIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TATFCGTPD 189
Query: 208 YLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVN 246
Y+APE + D ++ G+LL E+ G P E N
Sbjct: 190 YIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN 228
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 41/224 (18%)
Query: 46 LGEGGFGSVYWGQLW--DGSQI----AVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLS 98
L G FG+VY G LW +G ++ A+K L+ S KA E E ++A V + ++
Sbjct: 23 LSSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS----------A 148
L G C +LI MP CLL++ R IGS A
Sbjct: 82 LLGICLTSTVQLIT-QLMP-------------FGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---T 205
+G+ YL ++HRD+ A NVL+ ++ DFG AKL+ GA +G
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 182
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+ ++A E + + DV+S+G+ + EL + G KP + + ++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 226
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL---KVWSNKAEMEFAVEVEILARV 91
++F+ LG+G FG+VY + I A+K L ++ E + E+EI + +
Sbjct: 13 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 72
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L + Y + + ++ ++ P + R A+ +
Sbjct: 73 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR----FDEQRSATFMEELADAL 128
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H +IHRDIK N+L+ + ++ADFG++ P GTL YL P
Sbjct: 129 HYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC---GTLDYLPP 182
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++ G+L E G P +
Sbjct: 183 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 114/260 (43%), Gaps = 48/260 (18%)
Query: 10 GKVSDRKEKGKKQPTWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLW--DGSQI-- 65
G + R + Q RI LKE F L G FG+VY G LW +G ++
Sbjct: 1 GAMGIRSGEAPNQALLRI--LKE-----TEFKKIKVLSSGAFGTVYKG-LWIPEGEKVKI 52
Query: 66 --AVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXX 122
A+K L+ S KA E E ++A V + ++ L G C +LI MP
Sbjct: 53 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMP----- 106
Query: 123 XXXXXXXXXECLLNWNRRMDIAIGS----------AEGIVYLHHHATPHIIHRDIKASNV 172
CLL++ R IGS A+G+ YL ++HRD+ A NV
Sbjct: 107 --------FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 155
Query: 173 LLDADFKAQVADFGFAKLIPDGATHVTTRVKG---TLGYLAPEYAMLGKASESCDVYSFG 229
L+ ++ DFG AKL+ GA +G + ++A E + + DV+S+G
Sbjct: 156 LVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 213
Query: 230 ILLLELAS-GKKPIEKVNSA 248
+ + EL + G KP + + ++
Sbjct: 214 VTVWELMTFGSKPYDGIPAS 233
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL---KVWSNKAEMEFAVEVEILARV 91
++F+ LG+G FG+VY + I A+K L ++ E + E+EI + +
Sbjct: 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 71
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L + Y + + ++ ++ P + R A+ +
Sbjct: 72 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR----FDEQRSATFMEELADAL 127
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H +IHRDIK N+L+ + ++ADFG++ P GTL YL P
Sbjct: 128 HYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC---GTLDYLPP 181
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++ G+L E G P +
Sbjct: 182 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 26/223 (11%)
Query: 39 NFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLK----VWSNKAEMEFAVEVEILARVRH 93
+F + LGEG F +V +L + A+K L+ + NK E ++++R+ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-VTRERDVMSRLDH 91
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD------IAIGS 147
+ L + ++ Y N LL + R++ +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGE-------------LLKYIRKIGSFDETCTRFYT 138
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PDGATHVTTRVKGTL 206
AE + L + IIHRD+K N+LL+ D Q+ DFG AK++ P+ GT
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAI 249
Y++PE A +S D+++ G ++ +L +G P N +
Sbjct: 199 QYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGL 241
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 26/223 (11%)
Query: 39 NFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLK----VWSNKAEMEFAVEVEILARVRH 93
+F + LGEG F +V +L + A+K L+ + NK E ++++R+ H
Sbjct: 10 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-VTRERDVMSRLDH 68
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD------IAIGS 147
+ L + ++ Y N LL + R++ +
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGE-------------LLKYIRKIGSFDETCTRFYT 115
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PDGATHVTTRVKGTL 206
AE + L + IIHRD+K N+LL+ D Q+ DFG AK++ P+ GT
Sbjct: 116 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 175
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAI 249
Y++PE A +S D+++ G ++ +L +G P N +
Sbjct: 176 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 218
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 26/220 (11%)
Query: 39 NFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLK----VWSNKAEMEFAVEVEILARVRH 93
+F + LGEG F +V +L + A+K L+ + NK E ++++R+ H
Sbjct: 11 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-VTRERDVMSRLDH 69
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD------IAIGS 147
+ L + ++ Y N LL + R++ +
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGE-------------LLKYIRKIGSFDETCTRFYT 116
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PDGATHVTTRVKGTL 206
AE + L + IIHRD+K N+LL+ D Q+ DFG AK++ P+ GT
Sbjct: 117 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 176
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVN 246
Y++PE A +S D+++ G ++ +L +G P N
Sbjct: 177 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 216
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 91/209 (43%), Gaps = 16/209 (7%)
Query: 40 FNYDNKLGEGGFGSVYWGQLWDGSQ-IAVKRLKVWS--NKAEMEFAVEVEILARVRHKNL 96
+N LG+G FG V + Q AVK + S NK EVE+L ++ H N+
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 97 LSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+ L + IV + + + I GI Y+H
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAARIIKQVFSGITYMHK 139
Query: 157 HATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEY 213
H +I+HRD+K N+LL++ D ++ DFG + T + R+ GT Y+APE
Sbjct: 140 H---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE- 193
Query: 214 AMLGKASESCDVYSFGILLLELASGKKPI 242
+ G E CDV+S G++L L SG P
Sbjct: 194 VLRGTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 26/223 (11%)
Query: 39 NFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLK----VWSNKAEMEFAVEVEILARVRH 93
+F + LGEG F +V +L + A+K L+ + NK E ++++R+ H
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-VTRERDVMSRLDH 67
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD------IAIGS 147
+ L + ++ Y N LL + R++ +
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGE-------------LLKYIRKIGSFDETCTRFYT 114
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PDGATHVTTRVKGTL 206
AE + L + IIHRD+K N+LL+ D Q+ DFG AK++ P+ GT
Sbjct: 115 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 174
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAI 249
Y++PE A +S D+++ G ++ +L +G P N +
Sbjct: 175 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 217
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 26/223 (11%)
Query: 39 NFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLK----VWSNKAEMEFAVEVEILARVRH 93
+F + LGEG F +V +L + A+K L+ + NK E ++++R+ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-VTRERDVMSRLDH 91
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD------IAIGS 147
+ L + ++ Y N LL + R++ +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGE-------------LLKYIRKIGSFDETCTRFYT 138
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PDGATHVTTRVKGTL 206
AE + L + IIHRD+K N+LL+ D Q+ DFG AK++ P+ GT
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAI 249
Y++PE A +S D+++ G ++ +L +G P N +
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL 241
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 26/220 (11%)
Query: 39 NFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLK----VWSNKAEMEFAVEVEILARVRH 93
+F + LGEG F +V +L + A+K L+ + NK E ++++R+ H
Sbjct: 8 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-VTRERDVMSRLDH 66
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD------IAIGS 147
+ L + ++ Y N LL + R++ +
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGE-------------LLKYIRKIGSFDETCTRFYT 113
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PDGATHVTTRVKGTL 206
AE + L + IIHRD+K N+LL+ D Q+ DFG AK++ P+ GT
Sbjct: 114 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 173
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVN 246
Y++PE A +S D+++ G ++ +L +G P N
Sbjct: 174 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 213
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 147 SAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAK--LIPDGATHVTTRVKG 204
+AE I+ L + I++RD+K N+LLD D ++ADFG K ++ D T+ G
Sbjct: 124 AAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC---G 180
Query: 205 TLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
T Y+APE + K + S D +SFG+LL E+ G+ P
Sbjct: 181 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRL---KVWSNKAEMEFAVEVEILARV 91
++F+ LG+G FG+VY + I A+K L ++ E + E+EI + +
Sbjct: 12 TIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 71
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH N+L + Y + + ++ ++ P + R A+ +
Sbjct: 72 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR----FDEQRSATFMEELADAL 127
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAP 211
Y H +IHRDIK N+L+ + ++ADFG++ P GTL YL P
Sbjct: 128 HYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC---GTLDYLPP 181
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIE 243
E E D++ G+L E G P +
Sbjct: 182 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 26/220 (11%)
Query: 39 NFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLK----VWSNKAEMEFAVEVEILARVRH 93
+F + LGEG F +V +L + A+K L+ + NK E ++++R+ H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-VTRERDVMSRLDH 89
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD------IAIGS 147
+ L + ++ Y N LL + R++ +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGE-------------LLKYIRKIGSFDETCTRFYT 136
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PDGATHVTTRVKGTL 206
AE + L + IIHRD+K N+LL+ D Q+ DFG AK++ P+ GT
Sbjct: 137 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVN 246
Y++PE A +S D+++ G ++ +L +G P N
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 26/220 (11%)
Query: 39 NFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLK----VWSNKAEMEFAVEVEILARVRH 93
+F + LGEG F +V +L + A+K L+ + NK E ++++R+ H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-VTRERDVMSRLDH 89
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD------IAIGS 147
+ L + ++ Y N LL + R++ +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGE-------------LLKYIRKIGSFDETCTRFYT 136
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PDGATHVTTRVKGTL 206
AE + L + IIHRD+K N+LL+ D Q+ DFG AK++ P+ GT
Sbjct: 137 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVN 246
Y++PE A +S D+++ G ++ +L +G P N
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 79/163 (48%), Gaps = 23/163 (14%)
Query: 147 SAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTRVKGT 205
+ +G+ YLH++ +IHRD+K N+ L+ D ++ DFG A I DG T + GT
Sbjct: 151 TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LCGT 205
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERK 265
Y+APE S D++S G +L L GK P E S +K T K
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE--TSCLKETYIRI--------K 255
Query: 266 FSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
+E + PR + N V L R +L H+ P RP++ E+L
Sbjct: 256 KNEYSVPR-HINPVASALIRRML------HADPTLRPSVAELL 291
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 26/220 (11%)
Query: 39 NFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLK----VWSNKAEMEFAVEVEILARVRH 93
+F + LGEG F +V +L + A+K L+ + NK E ++++R+ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-VTRERDVMSRLDH 91
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD------IAIGS 147
+ L + ++ Y N LL + R++ +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGE-------------LLKYIRKIGSFDETCTRFYT 138
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PDGATHVTTRVKGTL 206
AE + L + IIHRD+K N+LL+ D Q+ DFG AK++ P+ GT
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVN 246
Y++PE A +S D+++ G ++ +L +G P N
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 58/238 (24%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLK---VWSNKAEMEFAV--------EVEILARVRHK 94
LGEG +G V Q+AV R+ V +M+ AV E+ I + H+
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 95 NLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----- 149
N++ G+ EG + + +Y R++ IG E
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFD----------------RIEPDIGMPEPDAQR 109
Query: 150 -------GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTR 201
G+VYLH I HRDIK N+LLD +++DFG A + + + +
Sbjct: 110 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 202 VKGTLGYLAPEYAMLGKA---SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
+ GTL Y+APE +L + +E DV+S GI+L + +G+ P ++ + + + +DW
Sbjct: 167 MXGTLPYVAPE--LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY-SDW 221
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 26/220 (11%)
Query: 39 NFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLK----VWSNKAEMEFAVEVEILARVRH 93
+F + LGEG F +V +L + A+K L+ + NK E ++++R+ H
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-VTRERDVMSRLDH 73
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD------IAIGS 147
+ L + ++ Y N LL + R++ +
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGE-------------LLKYIRKIGSFDETCTRFYT 120
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PDGATHVTTRVKGTL 206
AE + L + IIHRD+K N+LL+ D Q+ DFG AK++ P+ GT
Sbjct: 121 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 180
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVN 246
Y++PE A +S D+++ G ++ +L +G P N
Sbjct: 181 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 220
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 26/220 (11%)
Query: 39 NFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLK----VWSNKAEMEFAVEVEILARVRH 93
+F + LGEG F +V +L + A+K L+ + NK E ++++R+ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-VTRERDVMSRLDH 91
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD------IAIGS 147
+ L + ++ Y N LL + R++ +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGE-------------LLKYIRKIGSFDETCTRFYT 138
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PDGATHVTTRVKGTL 206
AE + L + IIHRD+K N+LL+ D Q+ DFG AK++ P+ GT
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVN 246
Y++PE A +S D+++ G ++ +L +G P N
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 26/220 (11%)
Query: 39 NFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLK----VWSNKAEMEFAVEVEILARVRH 93
+F + LGEG F +V +L + A+K L+ + NK E ++++R+ H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-VTRERDVMSRLDH 92
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD------IAIGS 147
+ L + ++ Y N LL + R++ +
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGE-------------LLKYIRKIGSFDETCTRFYT 139
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PDGATHVTTRVKGTL 206
AE + L + IIHRD+K N+LL+ D Q+ DFG AK++ P+ GT
Sbjct: 140 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 199
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVN 246
Y++PE A +S D+++ G ++ +L +G P N
Sbjct: 200 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 239
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 26/220 (11%)
Query: 39 NFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLK----VWSNKAEMEFAVEVEILARVRH 93
+F + LGEG F +V +L + A+K L+ + NK E ++++R+ H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-VTRERDVMSRLDH 92
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD------IAIGS 147
+ L + ++ Y N LL + R++ +
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGE-------------LLKYIRKIGSFDETCTRFYT 139
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PDGATHVTTRVKGTL 206
AE + L + IIHRD+K N+LL+ D Q+ DFG AK++ P+ GT
Sbjct: 140 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 199
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVN 246
Y++PE A +S D+++ G ++ +L +G P N
Sbjct: 200 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 239
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 45 KLGEGGFGSVYWGQLWD-GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
K+GEG G V + G +AVK++ + + EV I+ +H+N++ +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
G E +V +++ +N + + + + + LH +I
Sbjct: 218 LVGDELWVVMEFL-----EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VI 269
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTR--VKGTLGYLAPEYAMLGKASE 221
HRDIK+ ++LL D + +++DFGF + + V R + GT ++APE
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELISRLPYGP 326
Query: 222 SCDVYSFGILLLELASGKKP 241
D++S GI+++E+ G+ P
Sbjct: 327 EVDIWSLGIMVIEMVDGEPP 346
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 26/220 (11%)
Query: 39 NFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLK----VWSNKAEMEFAVEVEILARVRH 93
+F + LGEG F +V +L + A+K L+ + NK E ++++R+ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-VTRERDVMSRLDH 91
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD------IAIGS 147
+ L + ++ Y N LL + R++ +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGE-------------LLKYIRKIGSFDETCTRFYT 138
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PDGATHVTTRVKGTL 206
AE + L + IIHRD+K N+LL+ D Q+ DFG AK++ P+ GT
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVN 246
Y++PE A +S D+++ G ++ +L +G P N
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 26/220 (11%)
Query: 39 NFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLK----VWSNKAEMEFAVEVEILARVRH 93
+F + LGEG F +V +L + A+K L+ + NK E ++++R+ H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-VTRERDVMSRLDH 89
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD------IAIGS 147
+ L + ++ Y N LL + R++ +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGE-------------LLKYIRKIGSFDETCTRFYT 136
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PDGATHVTTRVKGTL 206
AE + L + IIHRD+K N+LL+ D Q+ DFG AK++ P+ GT
Sbjct: 137 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTA 196
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVN 246
Y++PE A +S D+++ G ++ +L +G P N
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 106/238 (44%), Gaps = 58/238 (24%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLK---VWSNKAEMEFAV--------EVEILARVRHK 94
LGEG +G V Q+AV R+ V +M+ AV E+ I A + H+
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 95 NLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----- 149
N++ G+ EG + + +Y R++ IG E
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFD----------------RIEPDIGMPEPDAQR 109
Query: 150 -------GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTR 201
G+VYLH I HRDIK N+LLD +++DFG A + + + +
Sbjct: 110 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 202 VKGTLGYLAPEYAMLGKA---SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
+ GTL Y+APE +L + +E DV+S GI+L + +G+ P ++ + + + +DW
Sbjct: 167 MCGTLPYVAPE--LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY-SDW 221
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 11/207 (5%)
Query: 45 KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVRHKNLLSLRGY 102
K+GEG +G VY Q G A+K++++ + E+ IL ++H N++ L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 103 CAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHI 162
+ ++V++++ E + + + + GI Y H +
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLL----NGIAYCHDR---RV 121
Query: 163 IHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKA-SE 221
+HRD+K N+L++ + + ++ADFG A+ T V TL Y AP+ M K S
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYST 180
Query: 222 SCDVYSFGILLLELASGKKPIEKVNSA 248
+ D++S G + E+ +G V+ A
Sbjct: 181 TIDIWSVGCIFAEMVNGTPLFPGVSEA 207
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 26/220 (11%)
Query: 39 NFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLK----VWSNKAEMEFAVEVEILARVRH 93
+F + LGEG F +V +L + A+K L+ + NK E ++++R+ H
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-VTRERDVMSRLDH 88
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD------IAIGS 147
+ L + ++ Y N LL + R++ +
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGE-------------LLKYIRKIGSFDETCTRFYT 135
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PDGATHVTTRVKGTL 206
AE + L + IIHRD+K N+LL+ D Q+ DFG AK++ P+ GT
Sbjct: 136 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 195
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVN 246
Y++PE A +S D+++ G ++ +L +G P N
Sbjct: 196 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 235
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 130/291 (44%), Gaps = 46/291 (15%)
Query: 46 LGEGGFGSVYWGQLWD-GSQIAVKR-LKVWSNKAEMEFAV-EVEILARVRHKNLLSLRGY 102
+GEG +G V + D G +A+K+ L+ +K + A+ E+++L ++RH+NL++L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 103 CAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHI 162
C + + +V++++ + L++ GI + H H +I
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPNG----LDYQVVQKYLFQIINGIGFCHSH---NI 145
Query: 163 IHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLG--KAS 220
IHRDIK N+L+ ++ DFGFA+ + V T Y APE ++G K
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV-ATRWYRAPE-LLVGDVKYG 203
Query: 221 ESCDVYSFGILLLELASGKKPIEKVNSAIKR-----------------------TITDWA 257
++ DV++ G L+ E+ G +P+ +S I +
Sbjct: 204 KAVDVWAIGCLVTEMFMG-EPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVR 262
Query: 258 LPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
LP ER+ E P+L+ + V+ +A C H P+KRP E+L
Sbjct: 263 LPEIKEREPLERRYPKLS--------EVVIDLAKKCLHIDPDKRPFCAELL 305
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 58/238 (24%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLK---VWSNKAEMEFAV--------EVEILARVRHK 94
LGEG +G V Q+AV R+ V +M+ AV E+ I + H+
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 95 NLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----- 149
N++ G+ EG + + +Y R++ IG E
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFD----------------RIEPDIGMPEPDAQR 108
Query: 150 -------GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTR 201
G+VYLH I HRDIK N+LLD +++DFG A + + + +
Sbjct: 109 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 202 VKGTLGYLAPEYAMLGKA---SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
+ GTL Y+APE +L + +E DV+S GI+L + +G+ P ++ + + + +DW
Sbjct: 166 MXGTLPYVAPE--LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDW 220
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 25/234 (10%)
Query: 17 EKGKKQPTWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRLK---- 71
E K++P+ +I LK +F LG+G FG V+ + +Q A+K LK
Sbjct: 3 ELNKERPSLQI-KLK-----IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV 56
Query: 72 VWSNKAEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLI-VYDYMPNXXXXXXXXXXXX 130
+ + E VE +L+ L+ + +E L V +Y+
Sbjct: 57 LMDDDVECT-MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK 115
Query: 131 XECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAK- 189
+ +R A G+ +LH I++RD+K N+LLD D ++ADFG K
Sbjct: 116 ----FDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKE 168
Query: 190 -LIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
++ D T GT Y+APE + K + S D +SFG+LL E+ G+ P
Sbjct: 169 NMLGDAK---TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 26/223 (11%)
Query: 39 NFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLK----VWSNKAEMEFAVEVEILARVRH 93
+F + LGEG F +V +L + A+K L+ + NK E ++++R+ H
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-VTRERDVMSRLDH 88
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD------IAIGS 147
+ L + ++ Y N LL + R++ +
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGE-------------LLKYIRKIGSFDETCTRFYT 135
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PDGATHVTTRVKGTL 206
AE + L + IIHRD+K N+LL+ D Q+ DFG AK++ P+ GT
Sbjct: 136 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 195
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAI 249
Y++PE A +S D+++ G ++ +L +G P N +
Sbjct: 196 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 238
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 51/222 (22%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARV--RHKNLLS----- 98
+G+G +G V W LW G +AVK ++S++ E + E EI V RH N+L
Sbjct: 16 VGKGRYGEV-WRGLWHGESVAVK---IFSSRDEQSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 99 LRGYCAEGQERLI--------VYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEG 150
+ + Q LI +YD++ L + + +A+ +A G
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQT--------------LEPHLALRLAVSAACG 117
Query: 151 IVYLH-----HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHV----TTR 201
+ +LH P I HRD K+ NVL+ ++ + +AD G A + G+ ++ R
Sbjct: 118 LAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPR 177
Query: 202 VKGTLGYLAPEYAMLGKASESC-------DVYSFGILLLELA 236
V GT Y+APE + + C D+++FG++L E+A
Sbjct: 178 V-GTKRYMAPE-VLDEQIRTDCFESYKWTDIWAFGLVLWEIA 217
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 107/221 (48%), Gaps = 28/221 (12%)
Query: 46 LGEGGFGSVYWGQLWD-GSQIAVKRL---KVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+G G FG VY +L D G +A+K++ K + N+ E++I+ ++ H N++ LR
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRY 80
Query: 102 YC-AEGQERLIVY-----DYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
+ + G+++ +VY DY+P + L ++ + + Y+H
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIH 139
Query: 156 HHATPHIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYA 214
I HRDIK N+LLD D ++ DFG AK + G +V+ + Y APE
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPE-L 193
Query: 215 MLGKA--SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
+ G + S DV+S G +L EL G +PI +S + + +
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 233
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 11/207 (5%)
Query: 45 KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVRHKNLLSLRGY 102
K+GEG +G VY Q G A+K++++ + E+ IL ++H N++ L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 103 CAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHI 162
+ ++V++++ E + + + + GI Y H +
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLL----NGIAYCHDR---RV 121
Query: 163 IHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKA-SE 221
+HRD+K N+L++ + + ++ADFG A+ T V TL Y AP+ M K S
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYST 180
Query: 222 SCDVYSFGILLLELASGKKPIEKVNSA 248
+ D++S G + E+ +G V+ A
Sbjct: 181 TIDIWSVGCIFAEMVNGAPLFPGVSEA 207
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 94/207 (45%), Gaps = 11/207 (5%)
Query: 45 KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVRHKNLLSLRGY 102
K+GEG +G VY Q G A+K++++ + E+ IL ++H N++ L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 103 CAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHI 162
+ ++V++++ E + + + + GI Y H +
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLL----NGIAYCHDR---RV 121
Query: 163 IHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKA-SE 221
+HRD+K N+L++ + + ++ADFG A+ T + TL Y AP+ M K S
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKYST 180
Query: 222 SCDVYSFGILLLELASGKKPIEKVNSA 248
+ D++S G + E+ +G V+ A
Sbjct: 181 TIDIWSVGCIFAEMVNGTPLFPGVSEA 207
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 74/160 (46%), Gaps = 20/160 (12%)
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGY 208
+G+ YLH IHRDIKA+NVLL + ++ADFG A + D V GT +
Sbjct: 115 KGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFW 170
Query: 209 LAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERKFSE 268
+APE D++S GI +ELA G+ P +++ P+ +
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH------------PMKVLFLIPK 218
Query: 269 LADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
P L GN+ + LK V C + +P RPT E+L
Sbjct: 219 NNPPTLEGNY-SKPLKEFV---EACLNKEPSFRPTAKELL 254
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 74/160 (46%), Gaps = 20/160 (12%)
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGY 208
+G+ YLH IHRDIKA+NVLL + ++ADFG A + D V GT +
Sbjct: 130 KGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFW 185
Query: 209 LAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERKFSE 268
+APE D++S GI +ELA G+ P +++ P+ +
Sbjct: 186 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH------------PMKVLFLIPK 233
Query: 269 LADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
P L GN+ + LK V C + +P RPT E+L
Sbjct: 234 NNPPTLEGNY-SKPLKEFVEA---CLNKEPSFRPTAKELL 269
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 100/229 (43%), Gaps = 63/229 (27%)
Query: 45 KLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARV--RHKNLLS---- 98
++G+G +G V+ G+ W G ++AVK V+ E + E EI V RH+N+L
Sbjct: 44 QIGKGRYGEVWMGK-WRGEKVAVK---VFFTTEEASWFRETEIYQTVLMRHENILGFIAA 99
Query: 99 -LRGYCAEGQERLI--------VYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE 149
++G + Q LI +YDY+ + L+ + +A S
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYLKSTT--------------LDAKSMLKLAYSSVS 145
Query: 150 GIVYLHH-----HATPHIIHRDIKASNVLLDADFKAQVADFGFA-KLIPDGA---THVTT 200
G+ +LH P I HRD+K+ N+L+ + +AD G A K I D T
Sbjct: 146 GLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNT 205
Query: 201 RVKGTLGYLAPE-------------YAMLGKASESCDVYSFGILLLELA 236
RV GT Y+ PE Y M D+YSFG++L E+A
Sbjct: 206 RV-GTKRYMPPEVLDESLNRNHFQSYIM-------ADMYSFGLILWEVA 246
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 26/220 (11%)
Query: 39 NFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLK----VWSNKAEMEFAVEVEILARVRH 93
+F + LGEG F +V +L + A+K L+ + NK E ++++R+ H
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-VTRERDVMSRLDH 94
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD------IAIGS 147
+ L + ++ Y N LL + R++ +
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGE-------------LLKYIRKIGSFDETCTRFYT 141
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PDGATHVTTRVKGTL 206
AE + L + IIHRD+K N+LL+ D Q+ DFG AK++ P+ GT
Sbjct: 142 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 201
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVN 246
Y++PE A +S D+++ G ++ +L +G P N
Sbjct: 202 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 241
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 92/210 (43%), Gaps = 18/210 (8%)
Query: 40 FNYDNKLGEGGFGSVYWGQLWDGSQ-IAVKRLKVWS--NKAEMEFAVEVEILARVRHKNL 96
+N LG+G FG V + Q AVK + S NK EVE+L ++ H N+
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 97 LSLRGYCAEGQERLIVYD-YMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
+ L + IV + Y E + I GI Y+H
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-----HDAARIIKQVFSGITYMH 138
Query: 156 HHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
H +I+HRD+K N+LL++ D ++ DFG + T + R+ GT Y+APE
Sbjct: 139 KH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE 193
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ G E CDV+S G++L L SG P
Sbjct: 194 -VLRGTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 126/295 (42%), Gaps = 38/295 (12%)
Query: 43 DNKLGEGGFGSVYWGQLWDGSQ----IAVKRLKVWSNKAEMEFAVEVEILAR-VRHKNLL 97
D +G+G FG VY G+ D +Q A+K L + ++E + +L R + H N+L
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 98 SLRGYC--AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
+L G EG +++ YM + + + + + A G+ YL
Sbjct: 86 ALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTVKDL---ISFGLQVARGMEYL- 140
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTR---VKGTLGYLAPE 212
A +HRD+ A N +LD F +VADFG A+ I D + + + + + A E
Sbjct: 141 --AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALE 198
Query: 213 YAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACERKFSELAD 271
+ + DV+SFG+LL EL + G P ++ D LA R+ +
Sbjct: 199 SLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP------FDLTHFLAQGRRLPQ--- 249
Query: 272 PRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLLKGESKEKLTELENDE 326
+ + L +V+ C + P RPT +L GE ++ ++ L D
Sbjct: 250 ----PEYCPDSLYQVM---QQCWEADPAVRPT----FRVLVGEVEQIVSALLGDH 293
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 92/210 (43%), Gaps = 18/210 (8%)
Query: 40 FNYDNKLGEGGFGSVYWGQLWDGSQ-IAVKRLKVWS--NKAEMEFAVEVEILARVRHKNL 96
+N LG+G FG V + Q AVK + S NK EVE+L ++ H N+
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 97 LSLRGYCAEGQERLIVYD-YMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
+ L + IV + Y E + I GI Y+H
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-----HDAARIIKQVFSGITYMH 138
Query: 156 HHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
H +I+HRD+K N+LL++ D ++ DFG + T + R+ GT Y+APE
Sbjct: 139 KH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE 193
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ G E CDV+S G++L L SG P
Sbjct: 194 -VLRGTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 13/208 (6%)
Query: 46 LGE-GGFGSVYWGQLWDGSQIAVKRLKVWSNKAEME-FAVEVEILARVRHKNLLSLRGYC 103
+GE G FG VY Q + S +A ++ ++ E+E + VE++ILA H N++ L
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 76
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
I+ ++ E L ++ + + + + YLH + II
Sbjct: 77 YYENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDN---KII 130
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASE-- 221
HRD+KA N+L D ++ADFG + GT ++APE M + +
Sbjct: 131 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRP 190
Query: 222 ---SCDVYSFGILLLELASGKKPIEKVN 246
DV+S GI L+E+A + P ++N
Sbjct: 191 YDYKADVWSLGITLIEMAEIEPPHHELN 218
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 58/238 (24%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLK---VWSNKAEMEFAV--------EVEILARVRHK 94
LGEG +G V Q+AV R+ V +M+ AV E+ I + H+
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 95 NLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----- 149
N++ G+ EG + + +Y R++ IG E
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFD----------------RIEPDIGMPEPDAQR 108
Query: 150 -------GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTR 201
G+VYLH I HRDIK N+LLD +++DFG A + + + +
Sbjct: 109 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 202 VKGTLGYLAPEYAMLGKA---SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
+ GTL Y+APE +L + +E DV+S GI+L + +G+ P ++ + + + +DW
Sbjct: 166 MCGTLPYVAPE--LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDW 220
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 22/216 (10%)
Query: 38 NNFNYDNKLGEGGFGSVYW---------GQLWDGSQIAVKRLKVWSNKAEMEFAVEVEIL 88
++F LG+G FG V+ G L+ + LKV + + +E +IL
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKV---RDRVRTKMERDIL 84
Query: 89 ARVRHKNLLSLR-GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS 147
A V H ++ L + EG+ LI+ D++ E + D+
Sbjct: 85 ADVNHPFVVKLHYAFQTEGKLYLIL-DFLRGGDLFTRLSK----EVMFTEE---DVKFYL 136
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLG 207
AE + L H + II+RD+K N+LLD + ++ DFG +K D + GT+
Sbjct: 137 AELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC-GTVE 195
Query: 208 YLAPEYAMLGKASESCDVYSFGILLLELASGKKPIE 243
Y+APE S S D +S+G+L+ E+ +G P +
Sbjct: 196 YMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQ 231
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 58/238 (24%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLK---VWSNKAEMEFAV--------EVEILARVRHK 94
LGEG +G V Q+AV R+ V +M+ AV E+ I + H+
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 95 NLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----- 149
N++ G+ EG + + +Y R++ IG E
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFD----------------RIEPDIGMPEPDAQR 108
Query: 150 -------GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTR 201
G+VYLH I HRDIK N+LLD +++DFG A + + + +
Sbjct: 109 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 202 VKGTLGYLAPEYAMLGKA---SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
+ GTL Y+APE +L + +E DV+S GI+L + +G+ P ++ + + + +DW
Sbjct: 166 MXGTLPYVAPE--LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY-SDW 220
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 45 KLGEGGFGSVYWGQLWD-GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
K+GEG G V + G +AVK++ + + EV I+ +H+N++ +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
G E +V +++ +N + + + + + LH +I
Sbjct: 96 LVGDELWVVMEFL-----EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VI 147
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTR--VKGTLGYLAPEYAMLGKASE 221
HRDIK+ ++LL D + +++DFGF + + V R + GT ++APE
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELISRLPYGP 204
Query: 222 SCDVYSFGILLLELASGKKP 241
D++S GI+++E+ G+ P
Sbjct: 205 EVDIWSLGIMVIEMVDGEPP 224
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 72/160 (45%), Gaps = 20/160 (12%)
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGY 208
+G+ YLH IHRDIKA+NVLL ++ADFG A + D T V GT +
Sbjct: 131 KGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFW 186
Query: 209 LAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERKFSE 268
+APE D++S GI +ELA G+ P NS + P+ +
Sbjct: 187 MAPEVIQQSAYDSKADIWSLGITAIELAKGEPP----NSDMH--------PMRVLFLIPK 234
Query: 269 LADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
P L G+F + K + C + P RPT E+L
Sbjct: 235 NNPPTLVGDFT-KSFKEFI---DACLNKDPSFRPTAKELL 270
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 58/238 (24%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLK---VWSNKAEMEFAV--------EVEILARVRHK 94
LGEG +G V Q+AV R+ V +M+ AV E+ I + H+
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 95 NLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----- 149
N++ G+ EG + + +Y R++ IG E
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFD----------------RIEPDIGMPEPDAQR 108
Query: 150 -------GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTR 201
G+VYLH I HRDIK N+LLD +++DFG A + + + +
Sbjct: 109 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 202 VKGTLGYLAPEYAMLGKA---SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
+ GTL Y+APE +L + +E DV+S GI+L + +G+ P ++ + + + +DW
Sbjct: 166 MXGTLPYVAPE--LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDW 220
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 45 KLGEGGFGSVYWGQLWD-GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
K+GEG G V + G +AVK++ + + EV I+ +H+N++ +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
G E +V +++ +N + + + + + LH +I
Sbjct: 98 LVGDELWVVMEFL-----EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VI 149
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTR--VKGTLGYLAPEYAMLGKASE 221
HRDIK+ ++LL D + +++DFGF + + V R + GT ++APE
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELISRLPYGP 206
Query: 222 SCDVYSFGILLLELASGKKP 241
D++S GI+++E+ G+ P
Sbjct: 207 EVDIWSLGIMVIEMVDGEPP 226
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 35/228 (15%)
Query: 46 LGEGGFGSVYWGQLWD--------GSQIAVKRLKVWSNKAEM-EFAVEVEILARV-RHKN 95
LGEG FG V + +++AVK LK + + ++ + E+E++ + +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 96 LLSLRGYCAEGQERLIVYDYMP--NXXXXXXXXXXXXXECLLNWNRRMDIAIGS------ 147
+++L G C + ++ +Y N E N + + + S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 148 ----AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVK 203
A G+ YL A+ IHRD+ A NVL+ D ++ADFG A+ I H+ K
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDXXKK 208
Query: 204 GTLG-----YLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV 245
T G ++APE + DV+SFG+LL E+ + G P V
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 14/210 (6%)
Query: 38 NNFNYDNKLGEGGFGSVYW-GQLWDGSQIAVKRLK--VWSNKAEMEFAV-EVEILARVRH 93
N+F+Y LG+G FG V + G A+K L+ V K E+ V E +L RH
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
L +L+ Y + +RL ++ E + R + Y
Sbjct: 68 PFLTALK-YAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 123
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKL-IPDGATHVTTRVKGTLGYLAPE 212
LH + +++RDIK N++LD D ++ DFG K I DGAT T GT YLAPE
Sbjct: 124 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPE 178
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ D + G+++ E+ G+ P
Sbjct: 179 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 26/220 (11%)
Query: 39 NFNYDNKLGEGGFGS-VYWGQLWDGSQIAVKRLK----VWSNKAEMEFAVEVEILARVRH 93
+F + LGEG F + V +L + A+K L+ + NK E ++++R+ H
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPY-VTRERDVMSRLDH 89
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD------IAIGS 147
+ L + ++ Y N LL + R++ +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGE-------------LLKYIRKIGSFDETCTRFYT 136
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PDGATHVTTRVKGTL 206
AE + L + IIHRD+K N+LL+ D Q+ DFG AK++ P+ GT
Sbjct: 137 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVN 246
Y++PE A +S D+++ G ++ +L +G P N
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 58/238 (24%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLK---VWSNKAEMEFAV--------EVEILARVRHK 94
LGEG +G V Q+AV R+ V +M+ AV E+ I + H+
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 95 NLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----- 149
N++ G+ EG + + +Y R++ IG E
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFD----------------RIEPDIGMPEPDAQR 108
Query: 150 -------GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTR 201
G+VYLH I HRDIK N+LLD +++DFG A + + + +
Sbjct: 109 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 202 VKGTLGYLAPEYAMLGKA---SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
+ GTL Y+APE +L + +E DV+S GI+L + +G+ P ++ + + + +DW
Sbjct: 166 MXGTLPYVAPE--LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQE-YSDW 220
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 45 KLGEGGFGSVYWGQLWD-GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
K+GEG G V + G +AVK++ + + EV I+ +H+N++ +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
G E +V +++ +N + + + + + LH +I
Sbjct: 141 LVGDELWVVMEFL-----EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VI 192
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTR--VKGTLGYLAPEYAMLGKASE 221
HRDIK+ ++LL D + +++DFGF + + V R + GT ++APE
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELISRLPYGP 249
Query: 222 SCDVYSFGILLLELASGKKP 241
D++S GI+++E+ G+ P
Sbjct: 250 EVDIWSLGIMVIEMVDGEPP 269
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 101/233 (43%), Gaps = 26/233 (11%)
Query: 30 LKELHSATNNFNYDNKLGEGGFGSVYWGQLW---DGSQIAVKRLKVWSNKAEM----EFA 82
LKE+ + F +LGE FG VY G L+ G Q +K +KAE EF
Sbjct: 20 LKEISLSAVRFM--EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 77
Query: 83 VEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXX------------X 130
E + AR++H N++ L G + Q +++ Y +
Sbjct: 78 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137
Query: 131 XECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFG-FAK 189
+ L + + A G+ YL H H++H+D+ NVL+ +++D G F +
Sbjct: 138 VKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFRE 194
Query: 190 LIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKP 241
+ + + ++APE M GK S D++S+G++L E+ S G +P
Sbjct: 195 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 247
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 45 KLGEGGFGSVYWGQLWD-GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
K+GEG G V + G +AVK++ + + EV I+ +H+N++ +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
G E +V +++ +N + + + + + LH +I
Sbjct: 87 LVGDELWVVMEFL-----EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VI 138
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTR--VKGTLGYLAPEYAMLGKASE 221
HRDIK+ ++LL D + +++DFGF + + V R + GT ++APE
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELISRLPYGP 195
Query: 222 SCDVYSFGILLLELASGKKP 241
D++S GI+++E+ G+ P
Sbjct: 196 EVDIWSLGIMVIEMVDGEPP 215
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 101/233 (43%), Gaps = 26/233 (11%)
Query: 30 LKELHSATNNFNYDNKLGEGGFGSVYWGQLW---DGSQIAVKRLKVWSNKAEM----EFA 82
LKE+ + F +LGE FG VY G L+ G Q +K +KAE EF
Sbjct: 3 LKEISLSAVRFM--EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 60
Query: 83 VEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXX------------X 130
E + AR++H N++ L G + Q +++ Y +
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 131 XECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFG-FAK 189
+ L + + A G+ YL H H++H+D+ NVL+ +++D G F +
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFRE 177
Query: 190 LIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKP 241
+ + + ++APE M GK S D++S+G++L E+ S G +P
Sbjct: 178 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 230
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 14/210 (6%)
Query: 38 NNFNYDNKLGEGGFGSVYW-GQLWDGSQIAVKRLK--VWSNKAEMEFAV-EVEILARVRH 93
N+F+Y LG+G FG V + G A+K L+ V K E+ V E +L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
L +L+ Y + +RL ++ E + R + Y
Sbjct: 65 PFLTALK-YAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKL-IPDGATHVTTRVKGTLGYLAPE 212
LH + +++RDIK N++LD D ++ DFG K I DGAT T GT YLAPE
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPE 175
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ D + G+++ E+ G+ P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 78/163 (47%), Gaps = 23/163 (14%)
Query: 147 SAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTRVKGT 205
+ +G+ YLH++ +IHRD+K N+ L+ D ++ DFG A I DG + GT
Sbjct: 151 TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKXLCGT 205
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERK 265
Y+APE S D++S G +L L GK P E S +K T K
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE--TSCLKETYIRI--------K 255
Query: 266 FSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
+E + PR + N V L R +L H+ P RP++ E+L
Sbjct: 256 KNEYSVPR-HINPVASALIRRML------HADPTLRPSVAELL 291
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 45 KLGEGGFGSVYWGQLWD-GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYC 103
K+GEG G V + G +AVK++ + + EV I+ +H+N++ +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
G E +V +++ +N + + + + + LH +I
Sbjct: 91 LVGDELWVVMEFL-----EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VI 142
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTR--VKGTLGYLAPEYAMLGKASE 221
HRDIK+ ++LL D + +++DFGF + + V R + GT ++APE
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELISRLPYGP 199
Query: 222 SCDVYSFGILLLELASGKKP 241
D++S GI+++E+ G+ P
Sbjct: 200 EVDIWSLGIMVIEMVDGEPP 219
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 78/163 (47%), Gaps = 23/163 (14%)
Query: 147 SAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTRVKGT 205
+ +G+ YLH++ +IHRD+K N+ L+ D ++ DFG A I DG + GT
Sbjct: 135 TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGT 189
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERK 265
Y+APE S D++S G +L L GK P E S +K T K
Sbjct: 190 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE--TSCLKETYIRI--------K 239
Query: 266 FSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
+E + PR + N V L R +L H+ P RP++ E+L
Sbjct: 240 KNEYSVPR-HINPVASALIRRML------HADPTLRPSVAELL 275
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 14/210 (6%)
Query: 38 NNFNYDNKLGEGGFGSVYW-GQLWDGSQIAVKRLK--VWSNKAEMEFAV-EVEILARVRH 93
N+F+Y LG+G FG V + G A+K L+ V K E+ V E +L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
L +L+ Y + +RL ++ E + R + Y
Sbjct: 65 PFLTALK-YAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKL-IPDGATHVTTRVKGTLGYLAPE 212
LH + +++RDIK N++LD D ++ DFG K I DGAT T GT YLAPE
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPE 175
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ D + G+++ E+ G+ P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 58/238 (24%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLK---VWSNKAEMEFAV--------EVEILARVRHK 94
LGEG +G V Q+AV R+ V +M+ AV E+ I + H+
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 95 NLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----- 149
N++ G+ EG + + +Y R++ IG E
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFD----------------RIEPDIGMPEPDAQR 108
Query: 150 -------GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTR 201
G+VYLH I HRDIK N+LLD +++DFG A + + + +
Sbjct: 109 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 202 VKGTLGYLAPEYAMLGKA---SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
+ GTL Y+APE +L + +E DV+S GI+L + +G+ P ++ + + + +DW
Sbjct: 166 MCGTLPYVAPE--LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY-SDW 220
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 58/238 (24%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLK---VWSNKAEMEFAV--------EVEILARVRHK 94
LGEG +G V Q+AV R+ V +M+ AV E+ I + H+
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 95 NLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----- 149
N++ G+ EG + + +Y R++ IG E
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFD----------------RIEPDIGMPEPDAQR 109
Query: 150 -------GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTR 201
G+VYLH I HRDIK N+LLD +++DFG A + + + +
Sbjct: 110 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 202 VKGTLGYLAPEYAMLGKA---SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
+ GTL Y+APE +L + +E DV+S GI+L + +G+ P ++ + + + +DW
Sbjct: 167 MCGTLPYVAPE--LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY-SDW 221
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 93/220 (42%), Gaps = 28/220 (12%)
Query: 39 NFNYDNKLGEGGFGSVYWGQLWDGSQI----AVKRLK----VWSNKAEMEFAVEVEILAR 90
NF LG G +G V+ + G A+K LK V K E ++L
Sbjct: 55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 114
Query: 91 VRHKNLLSLRGYCAEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRR-----MDIA 144
+R L Y + + +L ++ DY+ E + ++R ++
Sbjct: 115 IRQSPFLVTLHYAFQTETKLHLILDYINGG------------ELFTHLSQRERFTEHEVQ 162
Query: 145 IGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG 204
I E ++ L H II+RDIK N+LLD++ + DFG +K T G
Sbjct: 163 IYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCG 222
Query: 205 TLGYLAPEYAMLGKAS--ESCDVYSFGILLLELASGKKPI 242
T+ Y+AP+ G + ++ D +S G+L+ EL +G P
Sbjct: 223 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 58/238 (24%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLK---VWSNKAEMEFAV--------EVEILARVRHK 94
LGEG +G V Q+AV R+ V +M+ AV E+ I + H+
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 95 NLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----- 149
N++ G+ EG + + +Y R++ IG E
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFD----------------RIEPDIGMPEPDAQR 108
Query: 150 -------GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTR 201
G+VYLH I HRDIK N+LLD +++DFG A + + + +
Sbjct: 109 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 202 VKGTLGYLAPEYAMLGKA---SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
+ GTL Y+APE +L + +E DV+S GI+L + +G+ P ++ + + + +DW
Sbjct: 166 MCGTLPYVAPE--LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY-SDW 220
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 120/282 (42%), Gaps = 52/282 (18%)
Query: 46 LGEGGFGSVYWGQLW--DGS--QIAVKRLKV--WSNKAEMEFAVEVEILARVRHKNLLSL 99
LGEG FGSV G L DG+ ++AVK +K+ S + EF E + H N++ L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 100 RGYCAEGQER-----LIVYDYMPNXXXXXXXXXXXX--------XECLLNWNRRMDIAIG 146
G C E + +++ +M + LL + +DIA+G
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKF--MVDIALG 159
Query: 147 SAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRV-KGT 205
+ + + + +HRD+ A N +L D VADFG +K I G + R+ K
Sbjct: 160 -------MEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMP 212
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACER 264
+ ++A E + DV++FG+ + E+A+ G P V +
Sbjct: 213 VKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN----------------- 255
Query: 265 KFSELADPRLNGNFV---EEELKRVVLVALTCAHSKPEKRPT 303
E+ D L+G+ + E+ L + + +C + P RPT
Sbjct: 256 --HEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPT 295
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 58/238 (24%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLK---VWSNKAEMEFAV--------EVEILARVRHK 94
LGEG +G V Q+AV R+ V +M+ AV E+ I + H+
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 95 NLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----- 149
N++ G+ EG + + +Y R++ IG E
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFD----------------RIEPDIGMPEPDAQR 108
Query: 150 -------GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTR 201
G+VYLH I HRDIK N+LLD +++DFG A + + + +
Sbjct: 109 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 202 VKGTLGYLAPEYAMLGKA---SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
+ GTL Y+APE +L + +E DV+S GI+L + +G+ P ++ + + + +DW
Sbjct: 166 MCGTLPYVAPE--LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDW 220
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 58/238 (24%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLK---VWSNKAEMEFAV--------EVEILARVRHK 94
LGEG +G V Q+AV R+ V +M+ AV E+ I + H+
Sbjct: 13 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 95 NLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----- 149
N++ G+ EG + + +Y R++ IG E
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFD----------------RIEPDIGMPEPDAQR 107
Query: 150 -------GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTR 201
G+VYLH I HRDIK N+LLD +++DFG A + + + +
Sbjct: 108 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 164
Query: 202 VKGTLGYLAPEYAMLGKA---SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
+ GTL Y+APE +L + +E DV+S GI+L + +G+ P ++ + + + +DW
Sbjct: 165 MCGTLPYVAPE--LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDW 219
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 58/238 (24%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLK---VWSNKAEMEFAV--------EVEILARVRHK 94
LGEG +G V Q+AV R+ V +M+ AV E+ I + H+
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 95 NLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----- 149
N++ G+ EG + + +Y R++ IG E
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFD----------------RIEPDIGMPEPDAQR 109
Query: 150 -------GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTR 201
G+VYLH I HRDIK N+LLD +++DFG A + + + +
Sbjct: 110 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 202 VKGTLGYLAPEYAMLGKA---SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
+ GTL Y+APE +L + +E DV+S GI+L + +G+ P ++ + + + +DW
Sbjct: 167 MCGTLPYVAPE--LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDW 221
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 58/238 (24%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLK---VWSNKAEMEFAV--------EVEILARVRHK 94
LGEG +G V Q+AV R+ V +M+ AV E+ I + H+
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 95 NLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----- 149
N++ G+ EG + + +Y R++ IG E
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFD----------------RIEPDIGMPEPDAQR 109
Query: 150 -------GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTR 201
G+VYLH I HRDIK N+LLD +++DFG A + + + +
Sbjct: 110 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 202 VKGTLGYLAPEYAMLGKA---SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
+ GTL Y+APE +L + +E DV+S GI+L + +G+ P ++ + + + +DW
Sbjct: 167 MCGTLPYVAPE--LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY-SDW 221
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 46 LGEGGFGSVYWGQLWD-GSQIAVKRL---KVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+G G FG VY +L D G +A+K++ K + N+ E++I+ ++ H N++ LR
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRY 114
Query: 102 YCAEGQERL------IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
+ E+ +V DY+P + L ++ + + Y+H
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIH 173
Query: 156 HHATPHIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYA 214
I HRDIK N+LLD D ++ DFG AK + G +V+ + Y APE
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPEL- 227
Query: 215 MLGKA--SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
+ G + S DV+S G +L EL G +PI +S + + +
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 267
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 58/238 (24%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLK---VWSNKAEMEFAV--------EVEILARVRHK 94
LGEG +G V Q+AV R+ V +M+ AV E+ I + H+
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 95 NLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----- 149
N++ G+ EG + + +Y R++ IG E
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFD----------------RIEPDIGMPEPDAQR 108
Query: 150 -------GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTR 201
G+VYLH I HRDIK N+LLD +++DFG A + + + +
Sbjct: 109 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 202 VKGTLGYLAPEYAMLGKA---SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
+ GTL Y+APE +L + +E DV+S GI+L + +G+ P ++ + + + +DW
Sbjct: 166 MCGTLPYVAPE--LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY-SDW 220
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 35/228 (15%)
Query: 46 LGEGGFGSVYWGQLWD--------GSQIAVKRLKVWSNKAEM-EFAVEVEILARV-RHKN 95
LGEG FG V + +++AVK LK + + ++ + E+E++ + +HKN
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 96 LLSLRGYCAEGQERLIVYDYMP--NXXXXXXXXXXXXXECLLNWNRRMDIAIGS------ 147
+++L G C + ++ +Y N E N + + + S
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 148 ----AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHV----- 198
A G+ YL A+ IHRD+ A NVL+ D ++ADFG A+ I H+
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKK 193
Query: 199 TTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV 245
TT + + ++APE + DV+SFG+LL E+ + G P V
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 241
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 58/238 (24%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLK---VWSNKAEMEFAV--------EVEILARVRHK 94
LGEG +G V Q+AV R+ V +M+ AV E+ I + H+
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 95 NLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----- 149
N++ G+ EG + + +Y R++ IG E
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFD----------------RIEPDIGMPEPDAQR 108
Query: 150 -------GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTR 201
G+VYLH I HRDIK N+LLD +++DFG A + + + +
Sbjct: 109 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 202 VKGTLGYLAPEYAMLGKA---SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
+ GTL Y+APE +L + +E DV+S GI+L + +G+ P ++ + + + +DW
Sbjct: 166 MCGTLPYVAPE--LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY-SDW 220
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 35/228 (15%)
Query: 46 LGEGGFGSVYWGQLWD--------GSQIAVKRLKVWSNKAEM-EFAVEVEILARV-RHKN 95
LGEG FG V + +++AVK LK + + ++ + E+E++ + +HKN
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 96 LLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRR------------MDI 143
+++L G C + ++ +Y ++N +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHV----- 198
A A G+ YL A+ IHRD+ A NVL+ D ++ADFG A+ I H+
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKK 197
Query: 199 TTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV 245
TT + + ++APE + DV+SFG+LL E+ + G P V
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 245
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 35/228 (15%)
Query: 46 LGEGGFGSVYWGQLWD--------GSQIAVKRLKVWSNKAEM-EFAVEVEILARV-RHKN 95
LGEG FG V + +++AVK LK + + ++ + E+E++ + +HKN
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 96 LLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRR------------MDI 143
+++L G C + ++ +Y ++N +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHV----- 198
A A G+ YL A+ IHRD+ A NVL+ D ++ADFG A+ I H+
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKK 200
Query: 199 TTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV 245
TT + + ++APE + DV+SFG+LL E+ + G P V
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 248
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 58/238 (24%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLK---VWSNKAEMEFAV--------EVEILARVRHK 94
LGEG +G V Q+AV R+ V +M+ AV E+ I + H+
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 95 NLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----- 149
N++ G+ EG + + +Y R++ IG E
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFD----------------RIEPDIGMPEPDAQR 108
Query: 150 -------GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTR 201
G+VYLH I HRDIK N+LLD +++DFG A + + + +
Sbjct: 109 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 202 VKGTLGYLAPEYAMLGKA---SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
+ GTL Y+APE +L + +E DV+S GI+L + +G+ P ++ + + + +DW
Sbjct: 166 MCGTLPYVAPE--LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDW 220
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 78/163 (47%), Gaps = 23/163 (14%)
Query: 147 SAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTRVKGT 205
+ +G+ YLH++ +IHRD+K N+ L+ D ++ DFG A I DG + GT
Sbjct: 151 TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGT 205
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERK 265
Y+APE S D++S G +L L GK P E S +K T K
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE--TSCLKETYIRI--------K 255
Query: 266 FSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
+E + PR + N V L R +L H+ P RP++ E+L
Sbjct: 256 KNEYSVPR-HINPVASALIRRML------HADPTLRPSVAELL 291
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 58/238 (24%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLK---VWSNKAEMEFAV--------EVEILARVRHK 94
LGEG +G V Q+AV R+ V +M+ AV E+ I + H+
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 95 NLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----- 149
N++ G+ EG + + +Y R++ IG E
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFD----------------RIEPDIGMPEPDAQR 109
Query: 150 -------GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTR 201
G+VYLH I HRDIK N+LLD +++DFG A + + + +
Sbjct: 110 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 202 VKGTLGYLAPEYAMLGKA---SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
+ GTL Y+APE +L + +E DV+S GI+L + +G+ P ++ + + + +DW
Sbjct: 167 MCGTLPYVAPE--LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDW 221
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 58/238 (24%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLK---VWSNKAEMEFAV--------EVEILARVRHK 94
LGEG +G V Q+AV R+ V +M+ AV E+ I + H+
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 95 NLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----- 149
N++ G+ EG + + +Y R++ IG E
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFD----------------RIEPDIGMPEPDAQR 109
Query: 150 -------GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTR 201
G+VYLH I HRDIK N+LLD +++DFG A + + + +
Sbjct: 110 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 202 VKGTLGYLAPEYAMLGKA---SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
+ GTL Y+APE +L + +E DV+S GI+L + +G+ P ++ + + + +DW
Sbjct: 167 MCGTLPYVAPE--LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDW 221
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 58/238 (24%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLK---VWSNKAEMEFAV--------EVEILARVRHK 94
LGEG +G V Q+AV R+ V +M+ AV E+ I + H+
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 95 NLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----- 149
N++ G+ EG + + +Y R++ IG E
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFD----------------RIEPDIGMPEPDAQR 109
Query: 150 -------GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTR 201
G+VYLH I HRDIK N+LLD +++DFG A + + + +
Sbjct: 110 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 202 VKGTLGYLAPEYAMLGKA---SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
+ GTL Y+APE +L + +E DV+S GI+L + +G+ P ++ + + + +DW
Sbjct: 167 MCGTLPYVAPE--LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDW 221
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 35/228 (15%)
Query: 46 LGEGGFGSVYWGQLWD--------GSQIAVKRLKVWSNKAEM-EFAVEVEILARV-RHKN 95
LGEG FG V + +++AVK LK + + ++ + E+E++ + +HKN
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 96 LLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRR------------MDI 143
+++L G C + ++ +Y ++N +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHV----- 198
A A G+ YL A+ IHRD+ A NVL+ D ++ADFG A+ I H+
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKK 201
Query: 199 TTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV 245
TT + + ++APE + DV+SFG+LL E+ + G P V
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 249
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 35/228 (15%)
Query: 46 LGEGGFGSVYWGQLWD--------GSQIAVKRLKVWSNKAEM-EFAVEVEILARV-RHKN 95
LGEG FG V + +++AVK LK + + ++ + E+E++ + +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 96 LLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRR------------MDI 143
+++L G C + ++ +Y ++N +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHV----- 198
A A G+ YL A+ IHRD+ A NVL+ D ++ADFG A+ I H+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKK 208
Query: 199 TTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV 245
TT + + ++APE + DV+SFG+LL E+ + G P V
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 35/228 (15%)
Query: 46 LGEGGFGSVYWGQLWD--------GSQIAVKRLKVWSNKAEM-EFAVEVEILARV-RHKN 95
LGEG FG V + +++AVK LK + + ++ + E+E++ + +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 96 LLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRR------------MDI 143
+++L G C + ++ +Y ++N +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHV----- 198
A A G+ YL A+ IHRD+ A NVL+ D ++ADFG A+ I H+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKK 208
Query: 199 TTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV 245
TT + + ++APE + DV+SFG+LL E+ + G P V
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 46 LGEGGFGSVYWGQLWD-GSQIAVKRL---KVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+G G FG VY +L D G +A+K++ K + N+ E++I+ ++ H N++ LR
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRY 88
Query: 102 YCAEGQERL------IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
+ E+ +V DY+P + L ++ + + Y+H
Sbjct: 89 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIH 147
Query: 156 HHATPHIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYA 214
I HRDIK N+LLD D ++ DFG AK + G +V+ + Y APE
Sbjct: 148 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPE-L 201
Query: 215 MLGKA--SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
+ G + S DV+S G +L EL G +PI +S + + +
Sbjct: 202 IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 241
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 46 LGEGGFGSVYWGQLWD-GSQIAVKRL---KVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+G G FG VY +L D G +A+K++ K + N+ E++I+ ++ H N++ LR
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRY 99
Query: 102 YCAEGQERL------IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
+ E+ +V DY+P + L ++ + + Y+H
Sbjct: 100 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIH 158
Query: 156 HHATPHIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYA 214
I HRDIK N+LLD D ++ DFG AK + G +V+ + Y APE
Sbjct: 159 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPE-L 212
Query: 215 MLGKA--SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
+ G + S DV+S G +L EL G +PI +S + + +
Sbjct: 213 IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 252
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 14/218 (6%)
Query: 31 KELHSAT-NNFNYDNKLGEGGFGSVYW-GQLWDGSQIAVKRLKVWSNKAEMEFA---VEV 85
K H T N F Y LG+G FG V + G A+K LK A+ E A E
Sbjct: 143 KPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTEN 202
Query: 86 EILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAI 145
+L RH L +L+ Y + +RL ++ E + + +R
Sbjct: 203 RVLQNSRHPFLTALK-YSFQTHDRLC---FVMEYANGGELFFHLSRERVFSEDRARFYGA 258
Query: 146 GSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKL-IPDGATHVTTRVKG 204
+ YLH + ++++RD+K N++LD D ++ DFG K I DGAT T G
Sbjct: 259 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCG 314
Query: 205 TLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
T YLAPE + D + G+++ E+ G+ P
Sbjct: 315 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 34/224 (15%)
Query: 46 LGEGGFGSVYWGQLWD-GSQIAVKRL---KVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+G G FG VY +L D G +A+K++ K + N+ E++I+ ++ H N++ LR
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR-------ELQIMRKLDHCNIVRLRY 80
Query: 102 YCAEGQERL------IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
+ E+ +V DY+P + L ++ + + Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIH 139
Query: 156 HHATPHIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDG---ATHVTTRVKGTLGYLAP 211
I HRDIK N+LLD D ++ DFG AK + G +++ +R Y AP
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 191
Query: 212 EYAMLGKA--SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
E + G + S DV+S G +L EL G +PI +S + + +
Sbjct: 192 E-LIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 233
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 34/224 (15%)
Query: 46 LGEGGFGSVYWGQLWD-GSQIAVKRL---KVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+G G FG VY +L D G +A+K++ K + N+ E++I+ ++ H N++ LR
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRY 108
Query: 102 YCAEGQERL------IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
+ E+ +V DY+P + L ++ + + Y+H
Sbjct: 109 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIH 167
Query: 156 HHATPHIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDG---ATHVTTRVKGTLGYLAP 211
I HRDIK N+LLD D ++ DFG AK + G +++ +R Y AP
Sbjct: 168 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 219
Query: 212 EYAMLGKA--SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
E + G + S DV+S G +L EL G +PI +S + + +
Sbjct: 220 EL-IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 261
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 34/224 (15%)
Query: 46 LGEGGFGSVYWGQLWD-GSQIAVKRL---KVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+G G FG VY +L D G +A+K++ K + N+ E++I+ ++ H N++ LR
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR-------ELQIMRKLDHCNIVRLRY 80
Query: 102 YCAEGQERL------IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
+ E+ +V DY+P + L ++ + + Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIH 139
Query: 156 HHATPHIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDG---ATHVTTRVKGTLGYLAP 211
I HRDIK N+LLD D ++ DFG AK + G +++ +R Y AP
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 191
Query: 212 EYAMLGKA--SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
E + G + S DV+S G +L EL G +PI +S + + +
Sbjct: 192 E-LIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 233
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 35/228 (15%)
Query: 46 LGEGGFGSVYWGQLWD--------GSQIAVKRLKVWSNKAEM-EFAVEVEILARV-RHKN 95
LGEG FG V + +++AVK LK + + ++ + E+E++ + +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 96 LLSLRGYCAEGQERLIVYDYMP--NXXXXXXXXXXXXXECLLNWNRRMDIAIGS------ 147
+++L G C + ++ +Y N E N + + + S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 148 ----AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHV----- 198
A G+ YL A+ IHRD+ A NVL+ D ++ADFG A+ I H+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKK 208
Query: 199 TTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKV 245
TT + + ++APE + DV+SFG+LL E+ + G P V
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 46 LGEGGFGSVYWGQLWD-GSQIAVKRL---KVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+G G FG VY +L D G +A+K++ K + N+ E++I+ ++ H N++ LR
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRY 92
Query: 102 YCAEGQERL------IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
+ E+ +V DY+P + L ++ + + Y+H
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIH 151
Query: 156 HHATPHIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYA 214
I HRDIK N+LLD D ++ DFG AK + G +V+ + Y APE
Sbjct: 152 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPE-L 205
Query: 215 MLGKA--SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
+ G + S DV+S G +L EL G +PI +S + + +
Sbjct: 206 IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 245
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 46 LGEGGFGSVYWGQLWD-GSQIAVKRL---KVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+G G FG VY +L D G +A+K++ K + N+ E++I+ ++ H N++ LR
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR-------ELQIMRKLDHCNIVRLRY 80
Query: 102 YCAEGQERL------IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
+ E+ +V DY+P + L ++ + + Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIH 139
Query: 156 HHATPHIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYA 214
I HRDIK N+LLD D ++ DFG AK + G +V+ + Y APE
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPE-L 193
Query: 215 MLGKA--SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
+ G + S DV+S G +L EL G +PI +S + + +
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 233
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 46 LGEGGFGSVYWGQLWD-GSQIAVKRL---KVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+G G FG VY +L D G +A+K++ K + N+ E++I+ ++ H N++ LR
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRY 92
Query: 102 YCAEGQERL------IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
+ E+ +V DY+P + L ++ + + Y+H
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIH 151
Query: 156 HHATPHIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYA 214
I HRDIK N+LLD D ++ DFG AK + G +V+ + Y APE
Sbjct: 152 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPEL- 205
Query: 215 MLGKA--SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
+ G + S DV+S G +L EL G +PI +S + + +
Sbjct: 206 IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 245
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 125/295 (42%), Gaps = 57/295 (19%)
Query: 46 LGEGGFGSVYWGQLWD--------GSQIAVKRLKVWSNKAEM-EFAVEVEILARV-RHKN 95
LGEG FG V + +++AVK LK + + ++ + E+E++ + +HKN
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 96 LLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRR------------MDI 143
+++L G C + ++ +Y ++N +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHV----- 198
A A G+ YL A+ IHRD+ A NVL+ D ++ADFG A+ I H+
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKK 249
Query: 199 TTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWA 257
TT + + ++APE + DV+SFG+LL E+ + G P V
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV------------ 297
Query: 258 LPLACERKFSELADPRLNGNFVEEE---LKRVVLVALTCAHSKPEKRPTMLEVLD 309
E F L + G+ +++ + ++ C H+ P +RPT ++++
Sbjct: 298 ---PVEELFKLLKE----GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 345
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 34/224 (15%)
Query: 46 LGEGGFGSVYWGQLWD-GSQIAVKRL---KVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+G G FG VY +L D G +A+K++ K + N+ E++I+ ++ H N++ LR
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRY 114
Query: 102 YCAEGQERL------IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
+ E+ +V DY+P + L ++ + + Y+H
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIH 173
Query: 156 HHATPHIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDG---ATHVTTRVKGTLGYLAP 211
I HRDIK N+LLD D ++ DFG AK + G +++ +R Y AP
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 225
Query: 212 EYAMLGKA--SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
E + G + S DV+S G +L EL G +PI +S + + +
Sbjct: 226 EL-IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 267
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 46 LGEGGFGSVYWGQLWD-GSQIAVKRL---KVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+G G FG VY +L D G +A+K++ K + N+ E++I+ ++ H N++ LR
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRY 81
Query: 102 YCAEGQERL------IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
+ E+ +V DY+P + L ++ + + Y+H
Sbjct: 82 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIH 140
Query: 156 HHATPHIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYA 214
I HRDIK N+LLD D ++ DFG AK + G +V+ + Y APE
Sbjct: 141 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPE-L 194
Query: 215 MLGKA--SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
+ G + S DV+S G +L EL G +PI +S + + +
Sbjct: 195 IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 234
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 34/224 (15%)
Query: 46 LGEGGFGSVYWGQLWD-GSQIAVKRL---KVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+G G FG VY +L D G +A+K++ K + N+ E++I+ ++ H N++ LR
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRY 116
Query: 102 YCAEGQERL------IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
+ E+ +V DY+P + L ++ + + Y+H
Sbjct: 117 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIH 175
Query: 156 HHATPHIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDG---ATHVTTRVKGTLGYLAP 211
I HRDIK N+LLD D ++ DFG AK + G +++ +R Y AP
Sbjct: 176 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 227
Query: 212 EYAMLGKA--SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
E + G + S DV+S G +L EL G +PI +S + + +
Sbjct: 228 EL-IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 269
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 46 LGEGGFGSVYWGQLWD-GSQIAVKRL---KVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+G G FG VY +L D G +A+K++ K + N+ E++I+ ++ H N++ LR
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRY 80
Query: 102 YCAEGQERL------IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
+ E+ +V DY+P + L ++ + + Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIH 139
Query: 156 HHATPHIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYA 214
I HRDIK N+LLD D ++ DFG AK + G +V+ + Y APE
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPE-L 193
Query: 215 MLGKA--SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
+ G + S DV+S G +L EL G +PI +S + + +
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 233
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 46 LGEGGFGSVYWGQLWD-GSQIAVKRL---KVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+G G FG VY +L D G +A+K++ K + N+ E++I+ ++ H N++ LR
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRY 93
Query: 102 YCAEGQERL------IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
+ E+ +V DY+P + L ++ + + Y+H
Sbjct: 94 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIH 152
Query: 156 HHATPHIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYA 214
I HRDIK N+LLD D ++ DFG AK + G +V+ + Y APE
Sbjct: 153 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPE-L 206
Query: 215 MLGKA--SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
+ G + S DV+S G +L EL G +PI +S + + +
Sbjct: 207 IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 246
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 46 LGEGGFGSVYWGQLWD-GSQIAVKRL---KVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+G G FG VY +L D G +A+K++ K + N+ E++I+ ++ H N++ LR
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRY 80
Query: 102 YCAEGQERL------IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
+ E+ +V DY+P + L ++ + + Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIH 139
Query: 156 HHATPHIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYA 214
I HRDIK N+LLD D ++ DFG AK + G +V+ + Y APE
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPE-L 193
Query: 215 MLGKA--SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
+ G + S DV+S G +L EL G +PI +S + + +
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 233
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 34/224 (15%)
Query: 46 LGEGGFGSVYWGQLWD-GSQIAVKRL---KVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+G G FG VY +L D G +A+K++ K + N+ E++I+ ++ H N++ LR
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRY 118
Query: 102 YCAEGQERL------IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
+ E+ +V DY+P + L ++ + + Y+H
Sbjct: 119 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIH 177
Query: 156 HHATPHIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDG---ATHVTTRVKGTLGYLAP 211
I HRDIK N+LLD D ++ DFG AK + G +++ +R Y AP
Sbjct: 178 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 229
Query: 212 EYAMLGKA--SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
E + G + S DV+S G +L EL G +PI +S + + +
Sbjct: 230 EL-IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 271
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 46 LGEGGFGSVYWGQLWD-GSQIAVKRL---KVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+G G FG VY +L D G +A+K++ K + N+ E++I+ ++ H N++ LR
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRY 84
Query: 102 YCAEGQERL------IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
+ E+ +V DY+P + L ++ + + Y+H
Sbjct: 85 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIH 143
Query: 156 HHATPHIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYA 214
I HRDIK N+LLD D ++ DFG AK + G +V+ + Y APE
Sbjct: 144 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPE-L 197
Query: 215 MLGKA--SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
+ G + S DV+S G +L EL G +PI +S + + +
Sbjct: 198 IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 237
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 91/212 (42%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYW-GQLWDGSQIAVKRLK--VWSNKAEMEFAV-EVEILARV 91
N+F+Y LG+G FG V + G A+K L+ V K E+ V E +L
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH L +L+ Y + +RL ++ E + R +
Sbjct: 63 RHPFLTALK-YAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 118
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKL-IPDGATHVTTRVKGTLGYLA 210
YLH + +++RDIK N++LD D ++ DFG K I DGAT GT YLA
Sbjct: 119 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLA 173
Query: 211 PEYAMLGKASESCDVYSFGILLLELASGKKPI 242
PE + D + G+++ E+ G+ P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 14/218 (6%)
Query: 31 KELHSAT-NNFNYDNKLGEGGFGSVYW-GQLWDGSQIAVKRLKVWSNKAEMEFA---VEV 85
K H T N F Y LG+G FG V + G A+K LK A+ E A E
Sbjct: 140 KPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTEN 199
Query: 86 EILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAI 145
+L RH L +L+ Y + +RL ++ E + + +R
Sbjct: 200 RVLQNSRHPFLTALK-YSFQTHDRLC---FVMEYANGGELFFHLSRERVFSEDRARFYGA 255
Query: 146 GSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKL-IPDGATHVTTRVKG 204
+ YLH + ++++RD+K N++LD D ++ DFG K I DGAT T G
Sbjct: 256 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCG 311
Query: 205 TLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
T YLAPE + D + G+++ E+ G+ P
Sbjct: 312 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 34/224 (15%)
Query: 46 LGEGGFGSVYWGQLWD-GSQIAVKRL---KVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+G G FG VY +L D G +A+K++ K + N+ E++I+ ++ H N++ LR
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRY 159
Query: 102 YCAEGQERL------IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
+ E+ +V DY+P + L ++ + + Y+H
Sbjct: 160 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIH 218
Query: 156 HHATPHIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDG---ATHVTTRVKGTLGYLAP 211
I HRDIK N+LLD D ++ DFG AK + G +++ +R Y AP
Sbjct: 219 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 270
Query: 212 EYAMLGKA--SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
E + G + S DV+S G +L EL G +PI +S + + +
Sbjct: 271 EL-IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 312
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 100/239 (41%), Gaps = 44/239 (18%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQ------LWDGSQIAVKRLKV-WSNKAEMEFAVEVEILAR 90
NN Y +GEG FG V+ + + +AVK LK S + +F E ++A
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 91 VRHKNLLSLRGYCAEGQERLIVYDYM-------------PNXXXXXXXXXXXXXECL--- 134
+ N++ L G CA G+ ++++YM P+ +
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 135 ----LNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKL 190
L+ ++ IA A G+ YL +HRD+ N L+ + ++ADFG ++
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 191 I-------PDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKP 241
I DG + R ++ PE + + DV+++G++L E+ S G +P
Sbjct: 224 IYSADYYKADGNDAIPIR------WMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 34/224 (15%)
Query: 46 LGEGGFGSVYWGQLWD-GSQIAVKRL---KVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+G G FG VY +L D G +A+K++ K + N+ E++I+ ++ H N++ LR
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRY 85
Query: 102 YCAEGQERL------IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
+ E+ +V DY+P + L ++ + + Y+H
Sbjct: 86 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIH 144
Query: 156 HHATPHIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDG---ATHVTTRVKGTLGYLAP 211
I HRDIK N+LLD D ++ DFG AK + G +++ +R Y AP
Sbjct: 145 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 196
Query: 212 EYAMLGKA--SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
E + G + S DV+S G +L EL G +PI +S + + +
Sbjct: 197 EL-IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 238
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 17/222 (7%)
Query: 30 LKELHSATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRL-KVWSNKAEME-FAVEVE 86
+ +LH N+ +G+G F V + + G ++AVK + K N + ++ EV
Sbjct: 1 MADLH--IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVR 58
Query: 87 ILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIG 146
I+ + H N++ L + +V +Y W + +
Sbjct: 59 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-------GWMKEKEARAK 111
Query: 147 SAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTL 206
+ + + + I+HRD+KA N+LLDAD ++ADFGF+ G T G+
Sbjct: 112 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSP 169
Query: 207 GYLAPEYAMLGKASES--CDVYSFGILLLELASGKKPIEKVN 246
Y APE GK + DV+S G++L L SG P + N
Sbjct: 170 PYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 210
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 91/212 (42%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYW-GQLWDGSQIAVKRLK--VWSNKAEMEFAV-EVEILARV 91
N+F+Y LG+G FG V + G A+K L+ V K E+ V E +L
Sbjct: 8 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 67
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH L +L+ Y + +RL ++ E + R +
Sbjct: 68 RHPFLTALK-YAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 123
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKL-IPDGATHVTTRVKGTLGYLA 210
YLH + +++RDIK N++LD D ++ DFG K I DGAT GT YLA
Sbjct: 124 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLA 178
Query: 211 PEYAMLGKASESCDVYSFGILLLELASGKKPI 242
PE + D + G+++ E+ G+ P
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 91/212 (42%), Gaps = 14/212 (6%)
Query: 36 ATNNFNYDNKLGEGGFGSVYW-GQLWDGSQIAVKRLK--VWSNKAEMEFAV-EVEILARV 91
N+F+Y LG+G FG V + G A+K L+ V K E+ V E +L
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
RH L +L+ Y + +RL ++ E + R +
Sbjct: 63 RHPFLTALK-YAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 118
Query: 152 VYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKL-IPDGATHVTTRVKGTLGYLA 210
YLH + +++RDIK N++LD D ++ DFG K I DGAT GT YLA
Sbjct: 119 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLA 173
Query: 211 PEYAMLGKASESCDVYSFGILLLELASGKKPI 242
PE + D + G+++ E+ G+ P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 91/210 (43%), Gaps = 14/210 (6%)
Query: 38 NNFNYDNKLGEGGFGSVYW-GQLWDGSQIAVKRLK--VWSNKAEMEFAV-EVEILARVRH 93
N+F+Y LG+G FG V + G A+K L+ V K E+ V E +L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
L +L+ Y + +RL ++ E + R + Y
Sbjct: 65 PFLTALK-YAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKL-IPDGATHVTTRVKGTLGYLAPE 212
LH + +++RDIK N++LD D ++ DFG K I DGAT GT YLAPE
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPE 175
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ D + G+++ E+ G+ P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 46 LGEGGFGSVYWGQLWD---GSQIAVKRLKVWSNKAEMEFAV-EVEILARVRHKNLLSLRG 101
+GEG +G V +D +++A+K++ + ++ + + E++IL R RH+N++ +R
Sbjct: 51 IGEGAYGMV--SSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRD 108
Query: 102 YCAEG-----QERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
++ IV D M + + + ++ G+ Y+H
Sbjct: 109 ILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQI------LRGLKYIH- 161
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHV--TTRVKGTLGYLAPEYA 214
+ +++HRD+K SN+L++ ++ DFG A++ H T T Y APE
Sbjct: 162 --SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIM 219
Query: 215 MLGKA-SESCDVYSFGILLLELASGKKPI 242
+ K ++S D++S G +L E+ S +PI
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSN-RPI 247
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 46 LGEGGFGSVYWGQLWD-GSQIAVKRL---KVWSNKAEMEFAVEVEILARVRHKNLLSLRG 101
+G G FG VY +L D G +A+K++ K + N+ E++I+ ++ H N++ LR
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRY 80
Query: 102 YCAEGQERL------IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
+ E+ +V DY+P + L ++ + + Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIH 139
Query: 156 HHATPHIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYA 214
I HRDIK N+LLD D ++ DFG AK + G +V+ + Y APE
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPE-L 193
Query: 215 MLGKA--SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
+ G + S DV+S G +L EL G +PI +S + + +
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 233
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 15/223 (6%)
Query: 46 LGEGGFGSVYWGQL-WDGSQIAVKRLKVWSNKAEMEF---AVEVEILARVRHKNLLSLRG 101
LG GGFG V+ Q+ G A K+L K + VE +ILA+V + ++SL
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 102 YCAEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
Y E + L +V M R + G+ +LH
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR--- 308
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKAS 220
+II+RD+K NVLLD D +++D G A + G T T GT G++APE + +
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEYD 367
Query: 221 ESCDVYSFGILLLELASGKKPI----EKV-NSAIKRTITDWAL 258
S D ++ G+ L E+ + + P EKV N +K+ + + A+
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAV 410
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 15/223 (6%)
Query: 46 LGEGGFGSVYWGQL-WDGSQIAVKRLKVWSNKAEMEF---AVEVEILARVRHKNLLSLRG 101
LG GGFG V+ Q+ G A K+L K + VE +ILA+V + ++SL
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 102 YCAEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
Y E + L +V M R + G+ +LH
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR--- 308
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKAS 220
+II+RD+K NVLLD D +++D G A + G T T GT G++APE + +
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEYD 367
Query: 221 ESCDVYSFGILLLELASGKKPI----EKV-NSAIKRTITDWAL 258
S D ++ G+ L E+ + + P EKV N +K+ + + A+
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAV 410
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 15/223 (6%)
Query: 46 LGEGGFGSVYWGQL-WDGSQIAVKRLKVWSNKAEMEF---AVEVEILARVRHKNLLSLRG 101
LG GGFG V+ Q+ G A K+L K + VE +ILA+V + ++SL
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 102 YCAEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
Y E + L +V M R + G+ +LH
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR--- 308
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKAS 220
+II+RD+K NVLLD D +++D G A + G T T GT G++APE + +
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEYD 367
Query: 221 ESCDVYSFGILLLELASGKKPI----EKV-NSAIKRTITDWAL 258
S D ++ G+ L E+ + + P EKV N +K+ + + A+
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAV 410
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 85/206 (41%), Gaps = 23/206 (11%)
Query: 49 GGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCAEGQE 108
G FG V+ QL + +AVK + +K + E+ ++H+NLL G
Sbjct: 26 GRFGCVWKAQLMN-DFVAVKIFPL-QDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSN 83
Query: 109 RLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHAT--------P 160
L V ++ ++ WN +A + G+ YLH P
Sbjct: 84 -LEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKP 142
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLI----PDGATHVTTRVKGTLGYLAPEYA-- 214
I HRD K+ NVLL +D A +ADFG A P G TH GT Y+APE
Sbjct: 143 SIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV---GTRRYMAPEVLEG 199
Query: 215 ---MLGKASESCDVYSFGILLLELAS 237
A D+Y+ G++L EL S
Sbjct: 200 AINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 15/223 (6%)
Query: 46 LGEGGFGSVYWGQL-WDGSQIAVKRLKVWSNKAEMEF---AVEVEILARVRHKNLLSLRG 101
LG GGFG V+ Q+ G A K+L K + VE +ILA+V + ++SL
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 102 YCAEGQERL-IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
Y E + L +V M R + G+ +LH
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR--- 308
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKAS 220
+II+RD+K NVLLD D +++D G A + G T T GT G++APE + +
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEYD 367
Query: 221 ESCDVYSFGILLLELASGKKPI----EKV-NSAIKRTITDWAL 258
S D ++ G+ L E+ + + P EKV N +K+ + + A+
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAV 410
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEY--AM--- 215
H +HRDIK NVLLD + ++ADFG + D T ++ GT Y++PE AM
Sbjct: 211 HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDG 270
Query: 216 LGKASESCDVYSFGILLLELASGKKPI 242
+GK CD +S G+ + E+ G+ P
Sbjct: 271 MGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEY--AM--- 215
H +HRDIK NVLLD + ++ADFG + D T ++ GT Y++PE AM
Sbjct: 195 HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDG 254
Query: 216 LGKASESCDVYSFGILLLELASGKKPI 242
+GK CD +S G+ + E+ G+ P
Sbjct: 255 MGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 46 LGEGGFGSVYWGQLW--------DGSQIAVKRLKVWSNKAEM-EFAVEVEILARV-RHKN 95
LGEG FG V + + +AVK LK + + ++ + E+E++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 96 LLSLRGYCAEGQERLIVYDYMP--NXXXXXXXXXXXXXECLLNWNR----------RMDI 143
+++L G C + ++ +Y N E + NR +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPD-GATHVTTRV 202
A G+ YL A+ IHRD+ A NVL+ + ++ADFG A+ I + TT
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLEL 235
+ + ++APE + DV+SFG+L+ E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 24/209 (11%)
Query: 46 LGEGGFGSVYWGQLWDGS---QIAVKRLKVWSNKAEMEFAV-EVEILARVRHKNLLSLRG 101
+GEG +G V +D ++A+K++ + ++ + + E++IL R RH+N++ +
Sbjct: 31 IGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 102 YCA-----EGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+ ++ IV D M + + + ++ G+ Y+H
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIH- 141
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PD-GATHVTTRVKGTLGYLAPEYA 214
+ +++HRD+K SN+LL+ ++ DFG A++ PD T T T Y APE
Sbjct: 142 --SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 215 MLGKA-SESCDVYSFGILLLELASGKKPI 242
+ K ++S D++S G +L E+ S +PI
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSN-RPI 227
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 43 DNKLGEGGFGSVYWGQLWDGSQ---IAVKRLKVWSNKAEME-FAVEVEILARVRHKNLLS 98
D +LG G FGSV G + +A+K LK + KA+ E E +I+ ++ + ++
Sbjct: 15 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 74
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHA 158
L G C E L++ M E ++ ++ + G+ YL
Sbjct: 75 LIGVCQ--AEALMLVMEMAGGGPLHKFLVGKREEIPVS--NVAELLHQVSMGMKYLEEK- 129
Query: 159 TPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYAML 216
+ +HRD+ A NVLL A+++DFG +K + ++ T R G L + APE
Sbjct: 130 --NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINF 187
Query: 217 GKASESCDVYSFGILLLE-LASGKKPIEKV 245
K S DV+S+G+ + E L+ G+KP +K+
Sbjct: 188 RKFSSRSDVWSYGVTMWEALSYGQKPYKKM 217
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 46 LGEGGFGSV--YWGQLWDGSQIAVKRLKVWSNKAEMEFAV-EVEILARVRHKNLLSLRGY 102
+GEG +G V + L + ++A+K++ + ++ + + E++IL R RH+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDI 93
Query: 103 CA-----EGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+ ++ IV D M + + + ++ G+ Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIH-- 145
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PD-GATHVTTRVKGTLGYLAPEYAM 215
+ +++HRD+K SN+LL+ ++ DFG A++ PD T T T Y APE +
Sbjct: 146 -SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 216 LGKA-SESCDVYSFGILLLELASGKKPI 242
K ++S D++S G +L E+ S +PI
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 26/222 (11%)
Query: 46 LGEGGFGSVYWGQLW--DGSQI----AVKRLKV-WSNKAEMEFAVEVEILARVRHKNLLS 98
LG G FG+VY G +W DG + A+K L+ S KA E E ++A V +
Sbjct: 25 LGSGAFGTVYKG-IWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 99 LRGYCAEGQERLIVYDYMPN---XXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
L G C +L+ MP + LLNW ++ A+G+ YL
Sbjct: 84 LLGICLTSTVQLVT-QLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AKGMSYLE 136
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTRVKGTLGYLAPEYA 214
++HRD+ A NVL+ + ++ DFG A+L+ D + K + ++A E
Sbjct: 137 DV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESI 193
Query: 215 MLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITD 255
+ + + DV+S+G+ + EL + G KP + + + R I D
Sbjct: 194 LRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA---REIPD 232
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASE 221
IIHRDIK SN+LLD ++ DFG + + D TR G Y+APE + +
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK--TRDAGCRPYMAPERIDPSASRQ 204
Query: 222 S----CDVYSFGILLLELASGKKPIEKVNSAI 249
DV+S GI L ELA+G+ P K NS
Sbjct: 205 GYDVRSDVWSLGITLYELATGRFPYPKWNSVF 236
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 46 LGEGGFGSVYWGQLW--------DGSQIAVKRLKVWSNKAEM-EFAVEVEILARV-RHKN 95
LGEG FG V + + +AVK LK + + ++ + E+E++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 96 LLSLRGYCAEGQERLIVYDYMP--NXXXXXXXXXXXXXECLLNWNR----------RMDI 143
+++L G C + ++ +Y N E + NR +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPD-GATHVTTRV 202
A G+ YL A+ IHRD+ A NVL+ + ++ADFG A+ I + TT
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLEL 235
+ + ++APE + DV+SFG+L+ E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHVTTRVKGTL 206
G+ YLH H +I+HRD+K N+LL++ D ++ DFG + + + + R+ GT
Sbjct: 148 GVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF-ENQKKMKERL-GTA 202
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
Y+APE + K E CDV+S G++L L +G P
Sbjct: 203 YYIAPE-VLRKKYDEKCDVWSIGVILFILLAGYPPF 237
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 24/209 (11%)
Query: 46 LGEGGFGSVYWGQLWDGS---QIAVKRLKVWSNKAEMEFAV-EVEILARVRHKNLLSLRG 101
+GEG +G V +D ++A+K++ + ++ + + E++IL R RH+N++ +
Sbjct: 31 IGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 102 YCA-----EGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+ ++ IV D M + + + ++ G+ Y+H
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIH- 141
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PD-GATHVTTRVKGTLGYLAPEYA 214
+ +++HRD+K SN+LL+ ++ DFG A++ PD T T T Y APE
Sbjct: 142 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 215 MLGKA-SESCDVYSFGILLLELASGKKPI 242
+ K ++S D++S G +L E+ S +PI
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSN-RPI 227
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 24/209 (11%)
Query: 46 LGEGGFGSVYWGQLWDGS---QIAVKRLKVWSNKAEMEFAV-EVEILARVRHKNLLSLRG 101
+GEG +G V +D ++A+K++ + ++ + + E++IL R RH+N++ +
Sbjct: 31 IGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 102 YCA-----EGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+ ++ IV D M + + + ++ G+ Y+H
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIH- 141
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PD-GATHVTTRVKGTLGYLAPEYA 214
+ +++HRD+K SN+LL+ ++ DFG A++ PD T T T Y APE
Sbjct: 142 --SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 215 MLGKA-SESCDVYSFGILLLELASGKKPI 242
+ K ++S D++S G +L E+ S +PI
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSN-RPI 227
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 104/238 (43%), Gaps = 58/238 (24%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLK---VWSNKAEMEFAV--------EVEILARVRHK 94
LGEG G V Q+AV R+ V +M+ AV E+ I + H+
Sbjct: 14 LGEGAAGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 95 NLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----- 149
N++ G+ EG + + +Y R++ IG E
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFD----------------RIEPDIGMPEPDAQR 108
Query: 150 -------GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIP-DGATHVTTR 201
G+VYLH I HRDIK N+LLD +++DFG A + + + +
Sbjct: 109 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 202 VKGTLGYLAPEYAMLGKA---SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
+ GTL Y+APE +L + +E DV+S GI+L + +G+ P ++ + + + +DW
Sbjct: 166 MCGTLPYVAPE--LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDW 220
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 46 LGEGGFGSV--YWGQLWDGSQIAVKRLKVWSNKAEMEFAV-EVEILARVRHKNLLSLRGY 102
+GEG +G V + L + ++A+K++ + ++ + + E++IL R RH+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 103 CA-----EGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+ ++ IV D M + + + ++ G+ Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIH-- 145
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PD-GATHVTTRVKGTLGYLAPEYAM 215
+ +++HRD+K SN+LL+ ++ DFG A++ PD T T T Y APE +
Sbjct: 146 -SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 216 LGKA-SESCDVYSFGILLLELASGKKPI 242
K ++S D++S G +L E+ S +PI
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 127/306 (41%), Gaps = 60/306 (19%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQLW------DGSQIAVKRLKVWSNKAEME-FAVEVEILAR 90
+ N LG G FG V + +AVK LK + +E E++IL
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 91 V-RHKNLLSLRGYCAEGQERLIVY------------------DYMPNXXXXXXXXXXXXX 131
+ H N+++L G C + L+V +++P
Sbjct: 88 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTL 147
Query: 132 ECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI 191
E L+ ++ ++ A+G+ +L A+ IHRD+ A N+LL ++ DFG A+ I
Sbjct: 148 EHLICYSFQV------AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 192 ---PDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLE---LASGKKPIEKV 245
PD R+ L ++APE + DV+SFG+LL E L + P K+
Sbjct: 199 XKDPDXVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 256
Query: 246 NSAIKRTITDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTML 305
+ R + ++ + + P ++ E+ + + L C H +P +RPT
Sbjct: 257 DEEFCRRL----------KEGTRMRAP----DYTTPEMYQTM---LDCWHGEPSQRPTFS 299
Query: 306 EVLDLL 311
E+++ L
Sbjct: 300 ELVEHL 305
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 24/209 (11%)
Query: 46 LGEGGFGSVYWGQLWDGS---QIAVKRLKVWSNKAEMEFAV-EVEILARVRHKNLLSLRG 101
+GEG +G V +D ++A+K++ + ++ + + E++IL R RH+N++ +
Sbjct: 39 IGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 96
Query: 102 YCA-----EGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+ ++ IV D M + + + ++ G+ Y+H
Sbjct: 97 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIH- 149
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PD-GATHVTTRVKGTLGYLAPEYA 214
+ +++HRD+K SN+LL+ ++ DFG A++ PD T T T Y APE
Sbjct: 150 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 207
Query: 215 MLGKA-SESCDVYSFGILLLELASGKKPI 242
+ K ++S D++S G +L E+ S +PI
Sbjct: 208 LNSKGYTKSIDIWSVGCILAEMLSN-RPI 235
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 24/209 (11%)
Query: 46 LGEGGFGSVYWGQLWDGS---QIAVKRLKVWSNKAEMEFAV-EVEILARVRHKNLLSLRG 101
+GEG +G V +D ++A+K++ + ++ + + E++IL R RH+N++ +
Sbjct: 31 IGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 102 YCA-----EGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+ ++ IV D M + + + ++ G+ Y+H
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIH- 141
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PD-GATHVTTRVKGTLGYLAPEYA 214
+ +++HRD+K SN+LL+ ++ DFG A++ PD T T T Y APE
Sbjct: 142 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 215 MLGKA-SESCDVYSFGILLLELASGKKPI 242
+ K ++S D++S G +L E+ S +PI
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSN-RPI 227
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 46 LGEGGFGSVY--WGQLWDGSQIAVKRLKVWSNKAEMEFAV-EVEILARVRHKNLLSLRGY 102
+GEG +G V + L + ++A+K++ + ++ + + E++IL R RH+N++ +
Sbjct: 29 IGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 87
Query: 103 CA-----EGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+ ++ IV D M + + + ++ G+ Y+H
Sbjct: 88 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIH-- 139
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PD-GATHVTTRVKGTLGYLAPEYAM 215
+ +++HRD+K SN+LL+ ++ DFG A++ PD T T T Y APE +
Sbjct: 140 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 216 LGKA-SESCDVYSFGILLLELASGKKPI 242
K ++S D++S G +L E+ S +PI
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSN-RPI 225
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 46 LGEGGFGSVYWGQLW--------DGSQIAVKRLKVWSNKAEM-EFAVEVEILARV-RHKN 95
LGEG FG V + + +AVK LK + + ++ + E+E++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 96 LLSLRGYCAEGQERLIVYDYMP--NXXXXXXXXXXXXXECLLNWNR----------RMDI 143
+++L G C + ++ +Y N E + NR +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATH-VTTRV 202
A G+ YL A+ IHRD+ A NVL+ + ++ADFG A+ I + + TT
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLEL 235
+ + ++APE + DV+SFG+L+ E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 13/210 (6%)
Query: 38 NNFNYDNKLGEGGFGSVYW-GQLWDGSQIAVKRLKVWSNKAEMEFA---VEVEILARVRH 93
N F Y LG+G FG V + G A+K LK A+ E A E +L RH
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
L +L+ Y + +RL ++ E + + +R + Y
Sbjct: 70 PFLTALK-YSFQTHDRLC---FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 125
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKL-IPDGATHVTTRVKGTLGYLAPE 212
LH + ++++RD+K N++LD D ++ DFG K I DGAT GT YLAPE
Sbjct: 126 LH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPE 181
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ D + G+++ E+ G+ P
Sbjct: 182 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 13/210 (6%)
Query: 38 NNFNYDNKLGEGGFGSVYW-GQLWDGSQIAVKRLKVWSNKAEMEFA---VEVEILARVRH 93
N F Y LG+G FG V + G A+K LK A+ E A E +L RH
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
L +L+ Y + +RL ++ E + + +R + Y
Sbjct: 69 PFLTALK-YSFQTHDRLC---FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 124
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKL-IPDGATHVTTRVKGTLGYLAPE 212
LH + ++++RD+K N++LD D ++ DFG K I DGAT GT YLAPE
Sbjct: 125 LH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPE 180
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ D + G+++ E+ G+ P
Sbjct: 181 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 24/209 (11%)
Query: 46 LGEGGFGSVYWGQLWDGS---QIAVKRLKVWSNKAEMEFAV-EVEILARVRHKNLLSLRG 101
+GEG +G V +D ++A+K++ + ++ + + E++IL R RH+N++ +
Sbjct: 33 IGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 90
Query: 102 YCA-----EGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+ ++ IV D M + + + ++ G+ Y+H
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIH- 143
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PD-GATHVTTRVKGTLGYLAPEYA 214
+ +++HRD+K SN+LL+ ++ DFG A++ PD T T T Y APE
Sbjct: 144 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 215 MLGKA-SESCDVYSFGILLLELASGKKPI 242
+ K ++S D++S G +L E+ S +PI
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSN-RPI 229
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 24/209 (11%)
Query: 46 LGEGGFGSVYWGQLWDGS---QIAVKRLKVWSNKAEMEFAV-EVEILARVRHKNLLSLRG 101
+GEG +G V +D ++A+K++ + ++ + + E++IL R RH+N++ +
Sbjct: 31 IGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 102 YCA-----EGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+ ++ IV D M + + + ++ G+ Y+H
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIH- 141
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PD-GATHVTTRVKGTLGYLAPEYA 214
+ +++HRD+K SN+LL+ ++ DFG A++ PD T T T Y APE
Sbjct: 142 --SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 215 MLGKA-SESCDVYSFGILLLELASGKKPI 242
+ K ++S D++S G +L E+ S +PI
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSN-RPI 227
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 13/210 (6%)
Query: 38 NNFNYDNKLGEGGFGSVYW-GQLWDGSQIAVKRLKVWSNKAEMEFA---VEVEILARVRH 93
N F Y LG+G FG V + G A+K LK A+ E A E +L RH
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
L +L+ Y + +RL ++ E + + +R + Y
Sbjct: 68 PFLTALK-YSFQTHDRLC---FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 123
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKL-IPDGATHVTTRVKGTLGYLAPE 212
LH + ++++RD+K N++LD D ++ DFG K I DGAT GT YLAPE
Sbjct: 124 LH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPE 179
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ D + G+++ E+ G+ P
Sbjct: 180 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 46 LGEGGFGSVY--WGQLWDGSQIAVKRLKVWSNKAEMEFAV-EVEILARVRHKNLLSLRGY 102
+GEG +G V + L + ++A+K++ + ++ + + E++IL R RH+N++ +
Sbjct: 36 IGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 94
Query: 103 CA-----EGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+ ++ IV D M + + + ++ G+ Y+H
Sbjct: 95 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIH-- 146
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PD-GATHVTTRVKGTLGYLAPEYAM 215
+ +++HRD+K SN+LL+ ++ DFG A++ PD T T T Y APE +
Sbjct: 147 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 205
Query: 216 LGKA-SESCDVYSFGILLLELASGKKPI 242
K ++S D++S G +L E+ S +PI
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSN-RPI 232
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 46 LGEGGFGSVY--WGQLWDGSQIAVKRLKVWSNKAEMEFAV-EVEILARVRHKNLLSLRGY 102
+GEG +G V + L + ++A+K++ + ++ + + E++IL R RH+N++ +
Sbjct: 37 IGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 95
Query: 103 CA-----EGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+ ++ IV D M + + + ++ G+ Y+H
Sbjct: 96 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIH-- 147
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PD-GATHVTTRVKGTLGYLAPEYAM 215
+ +++HRD+K SN+LL+ ++ DFG A++ PD T T T Y APE +
Sbjct: 148 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 206
Query: 216 LGKA-SESCDVYSFGILLLELASGKKPI 242
K ++S D++S G +L E+ S +PI
Sbjct: 207 NSKGYTKSIDIWSVGCILAEMLSN-RPI 233
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 46 LGEGGFGSVY--WGQLWDGSQIAVKRLKVWSNKAEMEFAV-EVEILARVRHKNLLSLRGY 102
+GEG +G V + L + ++A+K++ + ++ + + E++IL R RH+N++ +
Sbjct: 28 IGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 86
Query: 103 CA-----EGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+ ++ IV D M + + + ++ G+ Y+H
Sbjct: 87 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIH-- 138
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PD-GATHVTTRVKGTLGYLAPEYAM 215
+ +++HRD+K SN+LL+ ++ DFG A++ PD T T T Y APE +
Sbjct: 139 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 197
Query: 216 LGKA-SESCDVYSFGILLLELASGKKPI 242
K ++S D++S G +L E+ S +PI
Sbjct: 198 NSKGYTKSIDIWSVGCILAEMLSN-RPI 224
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 46 LGEGGFGSVY--WGQLWDGSQIAVKRLKVWSNKAEMEFAV-EVEILARVRHKNLLSLRGY 102
+GEG +G V + L + ++A+K++ + ++ + + E++IL R RH+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 103 CA-----EGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+ ++ IV D M + + + ++ G+ Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIH-- 145
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PD-GATHVTTRVKGTLGYLAPEYAM 215
+ +++HRD+K SN+LL+ ++ DFG A++ PD T T T Y APE +
Sbjct: 146 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 216 LGKA-SESCDVYSFGILLLELASGKKPI 242
K ++S D++S G +L E+ S +PI
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 46 LGEGGFGSVY--WGQLWDGSQIAVKRLKVWSNKAEMEFAV-EVEILARVRHKNLLSLRGY 102
+GEG +G V + L + ++A+K++ + ++ + + E++IL R RH+N++ +
Sbjct: 29 IGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 87
Query: 103 CA-----EGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+ ++ IV D M + + + ++ G+ Y+H
Sbjct: 88 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIH-- 139
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PD-GATHVTTRVKGTLGYLAPEYAM 215
+ +++HRD+K SN+LL+ ++ DFG A++ PD T T T Y APE +
Sbjct: 140 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 216 LGKA-SESCDVYSFGILLLELASGKKPI 242
K ++S D++S G +L E+ S +PI
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSN-RPI 225
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 106/229 (46%), Gaps = 21/229 (9%)
Query: 33 LHSATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQ-IAVKRLKVWSNKAEMEFAV--EVEIL 88
L A + ++GEG +G V+ + L +G + +A+KR++V + + M + EV +L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 89 ARVR---HKNLLSLRGYCAEGQ-----ERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRR 140
+ H N++ L C + + +V++++ E +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV---DQDLTTYLDKVPEPGVPTETI 122
Query: 141 MDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTT 200
D+ G+ +LH H ++HRD+K N+L+ + + ++ADFG A++ T
Sbjct: 123 KDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALT 177
Query: 201 RVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAI 249
V TL Y APE + + D++S G + E+ +KP+ + +S +
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDV 225
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 106/229 (46%), Gaps = 21/229 (9%)
Query: 33 LHSATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQ-IAVKRLKVWSNKAEMEFAV--EVEIL 88
L A + ++GEG +G V+ + L +G + +A+KR++V + + M + EV +L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 89 ARVR---HKNLLSLRGYCAEGQ-----ERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRR 140
+ H N++ L C + + +V++++ E +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVP---EPGVPTETI 122
Query: 141 MDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTT 200
D+ G+ +LH H ++HRD+K N+L+ + + ++ADFG A++ T
Sbjct: 123 KDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALT 177
Query: 201 RVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAI 249
V TL Y APE + + D++S G + E+ +KP+ + +S +
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDV 225
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + GAT GT YLAPE
Sbjct: 177 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGATWTLC---GTPEYLAPE 229
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 25/202 (12%)
Query: 46 LGEGGFGSVYWGQLWDGSQI-AVKRLKVWSNKAEMEFAV------EVEILARVRHKNLLS 98
LGEG F +VY + + +QI A+K++K+ +++E + + E+++L + H N++
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKL-GHRSEAKDGINRTALREIKLLQELSHPNIIG 76
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHA 158
L +V+D+M +L + + + +G+ YLH H
Sbjct: 77 LLDAFGHKSNISLVFDFM----ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH- 131
Query: 159 TPHIIHRDIKASNVLLDADFKAQVADFGFAKLI--PDGAT--HVTTRVKGTLGYLAPEYA 214
I+HRD+K +N+LLD + ++ADFG AK P+ A V TR Y APE
Sbjct: 132 --WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTR-----WYRAPELL 184
Query: 215 MLGKA-SESCDVYSFGILLLEL 235
+ D+++ G +L EL
Sbjct: 185 FGARMYGVGVDMWAVGCILAEL 206
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 41/226 (18%)
Query: 39 NFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRL-KVWSNKAEME-FAVEVEILARVRHKN 95
N+ +G+G F V + + G ++AVK + K N ++ EV I+ + H N
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 96 LLSL-------------RGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD 142
++ L Y + G+ V+DY+ +++
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGE----VFDYLVAHGRMKEKEARAKFRQIVS------ 125
Query: 143 IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRV 202
+ Y H +I+HRD+KA N+LLD D ++ADFGF+ G T
Sbjct: 126 -------AVQYCHQK---YIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT--F 173
Query: 203 KGTLGYLAPEYAMLGKASES--CDVYSFGILLLELASGKKPIEKVN 246
G+ Y APE GK + DV+S G++L L SG P + N
Sbjct: 174 CGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 46 LGEGGFGSVY--WGQLWDGSQIAVKRLKVWSNKAEMEFAV-EVEILARVRHKNLLSLRGY 102
+GEG +G V + L + ++A+K++ + ++ + + E++IL R RH+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 103 CA-----EGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+ ++ IV D M + + + ++ G+ Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQI------LRGLKYIH-- 145
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PD-GATHVTTRVKGTLGYLAPEYAM 215
+ +++HRD+K SN+LL+ ++ DFG A++ PD T T T Y APE +
Sbjct: 146 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 216 LGKA-SESCDVYSFGILLLELASGKKPI 242
K ++S D++S G +L E+ S +PI
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 46 LGEGGFGSVYWGQLW--------DGSQIAVKRLKVWSNKAEM-EFAVEVEILARV-RHKN 95
LGEG FG V + + +AVK LK + + ++ + E+E++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 96 LLSLRGYCAEGQERLIVYDYMP--NXXXXXXXXXXXXXECLLNWNR----------RMDI 143
+++L G C + ++ +Y N E + NR +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHV-TTRV 202
A G+ YL A+ IHRD+ A NVL+ + ++ADFG A+ I + + TT
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLEL 235
+ + ++APE + DV+SFG+L+ E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 41/226 (18%)
Query: 39 NFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRL-KVWSNKAEME-FAVEVEILARVRHKN 95
N+ +G+G F V + + G ++A+K + K N ++ EV I+ + H N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 96 LLSL-------------RGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD 142
++ L Y + G+ V+DY+ +++
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGE----VFDYLVAHGRMKEKEARSKFRQIVS------ 122
Query: 143 IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRV 202
+ Y H I+HRD+KA N+LLDAD ++ADFGF+ G T
Sbjct: 123 -------AVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT--F 170
Query: 203 KGTLGYLAPEYAMLGKASES--CDVYSFGILLLELASGKKPIEKVN 246
G+ Y APE GK + DV+S G++L L SG P + N
Sbjct: 171 CGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 215
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 46 LGEGGFGSVYWGQLW--------DGSQIAVKRLKVWSNKAEM-EFAVEVEILARV-RHKN 95
LGEG FG V + + +AVK LK + + ++ + E+E++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 96 LLSLRGYCAEGQERLIVYDYMP--NXXXXXXXXXXXXXECLLNWNR----------RMDI 143
+++L G C + ++ +Y N E + NR +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATH-VTTRV 202
A G+ YL A+ IHRD+ A NVL+ + ++ADFG A+ I + + TT
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLEL 235
+ + ++APE + DV+SFG+L+ E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 95/224 (42%), Gaps = 21/224 (9%)
Query: 34 HSATNNFNYDNKLGEGGFGSVYWGQLWDGSQI--AVKRLK---VWSNKAEMEFAVEVEIL 88
H+ ++F++ +G+G FG V + ++ AVK L+ + K E E +L
Sbjct: 34 HAKPSDFHFLKVIGKGSFGKVLLAR-HKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVL 92
Query: 89 AR-VRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIA-IG 146
+ V+H L+ L + V DY+ C L R A I
Sbjct: 93 LKNVKHPFLVGLHFSFQTADKLYFVLDYI---NGGELFYHLQRERCFLEPRARFYAAEIA 149
Query: 147 SAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATH--VTTRVKG 204
SA G YLH + +I++RD+K N+LLD+ + DFG K + H T+ G
Sbjct: 150 SALG--YLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCG 201
Query: 205 TLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSA 248
T YLAPE + D + G +L E+ G P N+A
Sbjct: 202 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA 245
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 15/223 (6%)
Query: 46 LGEGGFGSVYWGQLWD----GSQIAVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLSLR 100
+GEG FG V+ G +A+K K S+ +F E + + H +++ L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
G E V+ M + L+ + A + + YL +
Sbjct: 458 GVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SK 510
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKAS 220
+HRDI A NVL+ A ++ DFG ++ + D + ++ K + ++APE + +
Sbjct: 511 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 221 ESCDVYSFGILLLE-LASGKKPIEKV--NSAIKRTITDWALPL 260
+ DV+ FG+ + E L G KP + V N I R LP+
Sbjct: 571 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 613
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 121/297 (40%), Gaps = 45/297 (15%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQLW------DGSQIAVKRLKVWSNKAEME-FAVEVEILAR 90
+ N LG G FG V + +AVK LK + +E E++IL
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 91 V-RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECL---------LNWNRR 140
+ H N+++L G C + L+V E + L
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 141 MDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI---PDGATH 197
+ + A+G+ +L A+ IHRD+ A N+LL ++ DFG A+ I PD
Sbjct: 147 IXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRK 203
Query: 198 VTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLE---LASGKKPIEKVNSAIKRTIT 254
R+ L ++APE + DV+SFG+LL E L + P K++ R +
Sbjct: 204 GDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRL- 260
Query: 255 DWALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
++ + + P ++ E+ + + L C H +P +RPT E+++ L
Sbjct: 261 ---------KEGTRMRAP----DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 301
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 24/209 (11%)
Query: 46 LGEGGFGSVYWGQLWDGS---QIAVKRLKVWSNKAEMEFAV-EVEILARVRHKNLLSLRG 101
+GEG +G V +D ++A+K++ + ++ + + E++IL R RH+N++ +
Sbjct: 51 IGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 102 YCA-----EGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+ ++ IV D M + + + ++ G+ Y+H
Sbjct: 109 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIH- 161
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PD-GATHVTTRVKGTLGYLAPEYA 214
+ +++HRD+K SN+LL+ ++ DFG A++ PD T T T Y APE
Sbjct: 162 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 215 MLGKA-SESCDVYSFGILLLELASGKKPI 242
+ K ++S D++S G +L E+ S +PI
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSN-RPI 247
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 46 LGEGGFGSVYWGQLW--------DGSQIAVKRLKVWSNKAEM-EFAVEVEILARV-RHKN 95
LGEG FG V + + +AVK LK + + ++ + E+E++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 96 LLSLRGYCAEGQERLIVYDYMP--NXXXXXXXXXXXXXECLLNWNR----------RMDI 143
+++L G C + ++ +Y N E + NR +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATH-VTTRV 202
A G+ YL A+ IHRD+ A NVL+ + ++ADFG A+ I + + TT
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLEL 235
+ + ++APE + DV+SFG+L+ E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 25/214 (11%)
Query: 40 FNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKV--WSNKAEMEFAVEVEILARVRHKNLL 97
N+ KL E G ++ G+ W G+ I VK LKV WS + +F E L H N+L
Sbjct: 12 LNFLTKLNENHSGELWKGR-WQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVL 70
Query: 98 SLRGYC--AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
+ G C ++ +MP +++ ++ + A+ A G+ +L
Sbjct: 71 PVLGACQSPPAPHPTLITHWMP--YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFL- 127
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQV--ADFGFAKLIPDGATHVTTRVKGTLGYLAPEY 213
H P I + + +V++D D A++ AD F+ P G + ++APE
Sbjct: 128 HTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP-GRMYAP-------AWVAPEA 179
Query: 214 AMLGKASE-----SCDVYSFGILLLELASGKKPI 242
L K E S D++SF +LL EL + + P
Sbjct: 180 --LQKKPEDTNRRSADMWSFAVLLWELVTREVPF 211
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 15/223 (6%)
Query: 46 LGEGGFGSVYWGQLWD----GSQIAVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLSLR 100
+GEG FG V+ G +A+K K S+ +F E + + H +++ L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
G E V+ M + L+ + A + + YL +
Sbjct: 458 GVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SK 510
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKAS 220
+HRDI A NVL+ ++ ++ DFG ++ + D + ++ K + ++APE + +
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 221 ESCDVYSFGILLLE-LASGKKPIEKV--NSAIKRTITDWALPL 260
+ DV+ FG+ + E L G KP + V N I R LP+
Sbjct: 571 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 613
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 95/226 (42%), Gaps = 41/226 (18%)
Query: 39 NFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRL-KVWSNKAEME-FAVEVEILARVRHKN 95
N+ +G+G F V + + G ++AVK + K N + ++ EV I+ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 96 LLSL-------------RGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD 142
++ L Y + G+ V+DY+ +++
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGE----VFDYLVAHGRMKEKEARAKFRQIVS------ 124
Query: 143 IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRV 202
+ Y H I+HRD+KA N+LLDAD ++ADFGF+ G T
Sbjct: 125 -------AVQYCHQK---FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--F 172
Query: 203 KGTLGYLAPEYAMLGKASES--CDVYSFGILLLELASGKKPIEKVN 246
G+ Y APE GK + DV+S G++L L SG P + N
Sbjct: 173 CGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 106/229 (46%), Gaps = 21/229 (9%)
Query: 33 LHSATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQ-IAVKRLKVWSNKAEMEFAV--EVEIL 88
L A + ++GEG +G V+ + L +G + +A+KR++V + + M + EV +L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 89 ARVR---HKNLLSLRGYCAEGQ-----ERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRR 140
+ H N++ L C + + +V++++ E +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVP---EPGVPTETI 122
Query: 141 MDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTT 200
D+ G+ +LH H ++HRD+K N+L+ + + ++ADFG A++ T
Sbjct: 123 KDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALT 177
Query: 201 RVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAI 249
V TL Y APE + + D++S G + E+ +KP+ + +S +
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDV 225
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 43 DNKLGEGGFGSVYWGQLWDGSQ---IAVKRLKVWSNKAEME-FAVEVEILARVRHKNLLS 98
D +LG G FGSV G + +A+K LK + KA+ E E +I+ ++ + ++
Sbjct: 341 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 400
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHA 158
L G C E L++ M E + + ++ + G+ YL
Sbjct: 401 LIGVCQ--AEALMLVMEMAGGGPLHKFLVGKREE--IPVSNVAELLHQVSMGMKYLEEK- 455
Query: 159 TPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYAML 216
+ +HR++ A NVLL A+++DFG +K + ++ T R G L + APE
Sbjct: 456 --NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINF 513
Query: 217 GKASESCDVYSFGILLLE-LASGKKPIEKV 245
K S DV+S+G+ + E L+ G+KP +K+
Sbjct: 514 RKFSSRSDVWSYGVTMWEALSYGQKPYKKM 543
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 99/243 (40%), Gaps = 28/243 (11%)
Query: 16 KEKGKKQPTWRIFSLKELHSATNNFNYDNKLGEGGFGSVYW------GQLWDGSQIAVKR 69
+E G+ +W+ K+ F + LG G F V G+L+ I K
Sbjct: 4 RENGESSSSWK----KQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKA 59
Query: 70 LKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXX 129
LK + E E AV L +++H+N+++L E L Y+
Sbjct: 60 LKGKESSIENEIAV----LRKIKHENIVALED-IYESPNHL----YLVMQLVSGGELFDR 110
Query: 130 XXECLLNWNRRMDIAIGSA-EGIVYLHHHATPHIIHRDIKASNVLL---DADFKAQVADF 185
E + I + + YLH I+HRD+K N+L D + K ++DF
Sbjct: 111 IVEKGFYTEKDASTLIRQVLDAVYYLHRMG---IVHRDLKPENLLYYSQDEESKIMISDF 167
Query: 186 GFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKV 245
G +K+ +G V + GT GY+APE S++ D +S G++ L G P
Sbjct: 168 GLSKM--EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 225
Query: 246 NSA 248
N +
Sbjct: 226 NDS 228
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 162 IIHRDIKASNVLL---DADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGK 218
++HRD+K N+L + + + ++ DFGFA+L P + T TL Y APE
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC-FTLHYAAPELLNQNG 185
Query: 219 ASESCDVYSFGILLLELASGKKPIEKVNSAIKRT 252
ESCD++S G++L + SG+ P + + ++ T
Sbjct: 186 YDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCT 219
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 46 LGEGGFGSVY--WGQLWDGSQIAVKRLKVWSNKAEMEFAV-EVEILARVRHKNLLSLRGY 102
+GEG +G V + L + ++A++++ + ++ + + E++IL R RH+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNL-NKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 103 CA-----EGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+ ++ IV D M + + + ++ G+ Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIH-- 145
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PD-GATHVTTRVKGTLGYLAPEYAM 215
+ +++HRD+K SN+LL+ ++ DFG A++ PD T T T Y APE +
Sbjct: 146 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 216 LGKA-SESCDVYSFGILLLELASGKKPI 242
K ++S D++S G +L E+ S +PI
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 95/226 (42%), Gaps = 41/226 (18%)
Query: 39 NFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRL-KVWSNKAEME-FAVEVEILARVRHKN 95
N+ +G+G F V + + G ++AVK + K N + ++ EV I+ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 96 LLSL-------------RGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD 142
++ L Y + G+ V+DY+ +++
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGE----VFDYLVAHGRMKEKEARAKFRQIVS------ 124
Query: 143 IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRV 202
+ Y H I+HRD+KA N+LLDAD ++ADFGF+ G T
Sbjct: 125 -------AVQYCHQK---FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--F 172
Query: 203 KGTLGYLAPEYAMLGKASES--CDVYSFGILLLELASGKKPIEKVN 246
G+ Y APE GK + DV+S G++L L SG P + N
Sbjct: 173 CGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLXGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 26/215 (12%)
Query: 46 LGEGGFGSVYWGQLW--------DGSQIAVKRLKVWSNKAEM-EFAVEVEILARV-RHKN 95
LGEG FG V + + +AVK LK + + ++ + E+E++ + +HKN
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 96 LLSLRGYCAEGQERLIVYDYMP--NXXXXXXXXXXXXXECLLNWNR----------RMDI 143
+++L G C + ++ +Y N E + NR +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATH-VTTRV 202
A G+ YL A+ IHRD+ A NVL+ + ++ADFG A+ I + + TT
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLELAS 237
+ + ++APE + DV+SFG+L+ E+ +
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 46 LGEGGFGSVYWGQLW--------DGSQIAVKRLKVWSNKAEM-EFAVEVEILARV-RHKN 95
LGEG FG V + + +AVK LK + + ++ + E+E++ + +HKN
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 96 LLSLRGYCAEGQERLIVYDYMP--NXXXXXXXXXXXXXECLLNWNR----------RMDI 143
+++L G C + ++ +Y N E + NR +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATH-VTTRV 202
A G+ YL A+ IHRD+ A NVL+ + ++ADFG A+ I + + TT
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLEL 235
+ + ++APE + DV+SFG+L+ E+
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 298
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 92/226 (40%), Gaps = 23/226 (10%)
Query: 30 LKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQI-AVKRLKVWSNKAEME---FAVEV 85
+K++ +F +G G FG V +L + ++ A+K L W E F E
Sbjct: 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREER 125
Query: 86 EILARVRHKNLLSLRGYCAEGQERLIVYDYMPN---XXXXXXXXXXXXXECLLNWNRRMD 142
++L K + +L + +V DY E + M
Sbjct: 126 DVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMV 185
Query: 143 IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFA-KLIPDGATHVTTR 201
IAI S + H +HRDIK N+L+D + ++ADFG KL+ DG +
Sbjct: 186 IAIDSVHQL---------HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA 236
Query: 202 VKGTLGYLAPEYAML-----GKASESCDVYSFGILLLELASGKKPI 242
V GT Y++PE G+ CD +S G+ + E+ G+ P
Sbjct: 237 V-GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 46 LGEGGFGSVYWGQLW--------DGSQIAVKRLKVWSNKAEM-EFAVEVEILARV-RHKN 95
LGEG FG V + + +AVK LK + + ++ + E+E++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 96 LLSLRGYCAEGQERLIVYDYMP--NXXXXXXXXXXXXXECLLNWNR----------RMDI 143
++ L G C + ++ +Y N E + NR +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATH-VTTRV 202
A G+ YL A+ IHRD+ A NVL+ + ++ADFG A+ I + + TT
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLEL 235
+ + ++APE + DV+SFG+L+ E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLAGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 46 LGEGGFGSVYWGQLW--------DGSQIAVKRLKVWSNKAEM-EFAVEVEILARV-RHKN 95
LGEG FG V + + +AVK LK + + ++ + E+E++ + +HKN
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 96 LLSLRGYCAEGQERLIVYDYMP--NXXXXXXXXXXXXXECLLNWNR----------RMDI 143
+++L G C + ++ +Y N E + NR +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATH-VTTRV 202
A G+ YL A+ IHRD+ A NVL+ + ++ADFG A+ I + + TT
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLEL 235
+ + ++APE + DV+SFG+L+ E+
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 244
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 46 LGEGGFGSVYWGQLW--------DGSQIAVKRLKVWSNKAEM-EFAVEVEILARV-RHKN 95
LGEG FG V + + +AVK LK + + ++ + E+E++ + +HKN
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 96 LLSLRGYCAEGQERLIVYDYMP--NXXXXXXXXXXXXXECLLNWNR----------RMDI 143
+++L G C + ++ +Y N E + NR +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATH-VTTRV 202
A G+ YL A+ IHRD+ A NVL+ + ++ADFG A+ I + + TT
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLEL 235
+ + ++APE + DV+SFG+L+ E+
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 241
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 24/219 (10%)
Query: 46 LGEGGFGSVYWGQLWDGSQ----IAVKRLK----VWSNKAEMEFAVEVEILARVRHKNLL 97
LG+GG+G V+ + G+ A+K LK V + K E IL V+H ++
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 98 SLRGYCAEGQERLIVYDYMPNXXXXXXXXX--XXXXECLLNWNRRMDIAIGSAEGIVYLH 155
L G + ++ +Y+ + + + +A+G +LH
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG------HLH 138
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAK-LIPDGATHVTTRVKGTLGYLAPEYA 214
II+RD+K N++L+ ++ DFG K I DG VT GT+ Y+APE
Sbjct: 139 QKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHXFCGTIEYMAPEIL 193
Query: 215 MLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
M + + D +S G L+ ++ +G P N K+TI
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR--KKTI 230
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 24/219 (10%)
Query: 46 LGEGGFGSVYWGQLWDGSQ----IAVKRLK----VWSNKAEMEFAVEVEILARVRHKNLL 97
LG+GG+G V+ + G+ A+K LK V + K E IL V+H ++
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 98 SLRGYCAEGQERLIVYDYMPNXXXXXXXXX--XXXXECLLNWNRRMDIAIGSAEGIVYLH 155
L G + ++ +Y+ + + + +A+G +LH
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG------HLH 138
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAK-LIPDGATHVTTRVKGTLGYLAPEYA 214
II+RD+K N++L+ ++ DFG K I DG VT GT+ Y+APE
Sbjct: 139 QKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHTFCGTIEYMAPEIL 193
Query: 215 MLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
M + + D +S G L+ ++ +G P N K+TI
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR--KKTI 230
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 96/223 (43%), Gaps = 38/223 (17%)
Query: 46 LGEGGFGSVYWGQLWD-----GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLR 100
LG+GGF + D +I K L + ++ E + ++E+ I + H++++
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE-KMSMEISIHRSLAHQHVVGFH 87
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----------G 150
G+ + +V + LL ++R A+ E G
Sbjct: 88 GFFEDNDFVFVVLELC-------------RRRSLLELHKRRK-ALTEPEARYYLRQIVLG 133
Query: 151 IVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFA-KLIPDGATHVTTRVKGTLGYL 209
YLH + +IHRD+K N+ L+ D + ++ DFG A K+ DG T + GT Y+
Sbjct: 134 CQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYI 188
Query: 210 APEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRT 252
APE S DV+S G ++ L GK P E S +K T
Sbjct: 189 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE--TSCLKET 229
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 96/223 (43%), Gaps = 38/223 (17%)
Query: 46 LGEGGFGSVYWGQLWD-----GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLR 100
LG+GGF + D +I K L + ++ E + ++E+ I + H++++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE-KMSMEISIHRSLAHQHVVGFH 83
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----------G 150
G+ + +V + LL ++R A+ E G
Sbjct: 84 GFFEDNDFVFVVLELC-------------RRRSLLELHKRRK-ALTEPEARYYLRQIVLG 129
Query: 151 IVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFA-KLIPDGATHVTTRVKGTLGYL 209
YLH + +IHRD+K N+ L+ D + ++ DFG A K+ DG T + GT Y+
Sbjct: 130 CQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYI 184
Query: 210 APEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRT 252
APE S DV+S G ++ L GK P E S +K T
Sbjct: 185 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE--TSCLKET 225
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 96/223 (43%), Gaps = 38/223 (17%)
Query: 46 LGEGGFGSVYWGQLWD-----GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLR 100
LG+GGF + D +I K L + ++ E + ++E+ I + H++++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE-KMSMEISIHRSLAHQHVVGFH 83
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----------G 150
G+ + +V + LL ++R A+ E G
Sbjct: 84 GFFEDNDFVFVVLELC-------------RRRSLLELHKRRK-ALTEPEARYYLRQIVLG 129
Query: 151 IVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFA-KLIPDGATHVTTRVKGTLGYL 209
YLH + +IHRD+K N+ L+ D + ++ DFG A K+ DG T + GT Y+
Sbjct: 130 CQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYI 184
Query: 210 APEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRT 252
APE S DV+S G ++ L GK P E S +K T
Sbjct: 185 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE--TSCLKET 225
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 25/217 (11%)
Query: 37 TNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLK---VWSNKAEMEFAVEVEILARVR 92
++ + KLG G +G V + G++ A+K +K V + EV +L ++
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 93 HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWN-RRMDIAIGSAE-- 149
H N++ L + + + +V + E +L +D A+ +
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFD--------EIILRQKFSEVDAAVIMKQVL 114
Query: 150 -GIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHVTTRVKGT 205
G YLH H +I+HRD+K N+LL++ D ++ DFG + G + R+ GT
Sbjct: 115 SGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK-MKERL-GT 169
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
Y+APE + K E CDV+S G++L L G P
Sbjct: 170 AYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPPF 205
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 46 LGEGGFGSVYWGQLW--------DGSQIAVKRLKVWSNKAEM-EFAVEVEILARV-RHKN 95
LGEG FG V + + +AVK LK + + ++ + E+E++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 96 LLSLRGYCAEGQERLIVYDYMP--NXXXXXXXXXXXXXECLLNWNR----------RMDI 143
+++L G C + ++ Y N E + NR +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATH-VTTRV 202
A G+ YL A+ IHRD+ A NVL+ + ++ADFG A+ I + + TT
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLEL 235
+ + ++APE + DV+SFG+L+ E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 107/250 (42%), Gaps = 33/250 (13%)
Query: 40 FNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNK----AEMEFAVEVEILARVRHKN 95
+D ++G G F +VY G L + + V ++ K F E E L ++H N
Sbjct: 28 LKFDIEIGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPN 86
Query: 96 LLSLRGY-----CAEGQERLIVYDYMPNXXXXXX---XXXXXXXECLLNWNRRMDIAIGS 147
++ R Y +G++ +++ + + L +W R++
Sbjct: 87 IV--RFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------ 138
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGATHVTTRVKGTL 206
+G+ +LH TP IIHRD+K N+ + ++ D G A L V GT
Sbjct: 139 LKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKAVIGTP 194
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSA--IKRTITDWALPLACER 264
+ APE K ES DVY+FG LE A+ + P + +A I R +T P +
Sbjct: 195 EFXAPE-XYEEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPAS--- 250
Query: 265 KFSELADPRL 274
F ++A P +
Sbjct: 251 -FDKVAIPEV 259
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 35/214 (16%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARV--RHKNLLS----- 98
+G+G +G V+ G W G +AVK ++S++ E + E E+ V RH+N+L
Sbjct: 16 VGKGRYGEVWRGS-WQGENVAVK---IFSSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 99 LRGYCAEGQERLIV-YDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH-- 155
+ + Q LI Y M + CL I + A G+ +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL-------RIVLSIASGLAHLHIE 124
Query: 156 ---HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHV----TTRVKGTLGY 208
P I HRD+K+ N+L+ + + +AD G A + + RV GT Y
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRY 183
Query: 209 LAPEY------AMLGKASESCDVYSFGILLLELA 236
+APE + + D+++FG++L E+A
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 23/233 (9%)
Query: 23 PTWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKA----E 78
P W K+ + +++ + LG G F V + D + +K + KA E
Sbjct: 8 PRW-----KQAEDIRDIYDFRDVLGTGAFSEVILAE--DKRTQKLVAIKCIAKKALEGKE 60
Query: 79 MEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWN 138
E+ +L +++H N+++L G ++ + +
Sbjct: 61 GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVE----KGFYTER 116
Query: 139 RRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVL---LDADFKAQVADFGFAKLIPDGA 195
+ + + YLH I+HRD+K N+L LD D K ++DFG +K+ G+
Sbjct: 117 DASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 196 THVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSA 248
V + GT GY+APE S++ D +S G++ L G P N A
Sbjct: 174 --VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA 224
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASE 221
I+HRD+KA N+LLDAD ++ADFGF+ G T G+ Y APE GK +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPE-LFQGKKYD 190
Query: 222 S--CDVYSFGILLLELASGKKPIEKVN 246
DV+S G++L L SG P + N
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 39/216 (18%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARV--RHKNLLSLRGYC 103
+G+G FG V+ G+ W G ++AVK ++S++ E + E EI V RH+N+L G+
Sbjct: 12 IGKGRFGEVWRGK-WRGEEVAVK---IFSSREERSWFREAEIYQTVMLRHENIL---GFI 64
Query: 104 AEGQ-------ERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
A + +V DY + + + +A+ +A G+ +LH
Sbjct: 65 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHM 119
Query: 157 -----HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTT-----RVKGTL 206
P I HRD+K+ N+L+ + +AD G A + D AT RV GT
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRV-GTK 177
Query: 207 GYLAPEY---AMLGKASES---CDVYSFGILLLELA 236
Y+APE ++ K ES D+Y+ G++ E+A
Sbjct: 178 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 213
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 143 IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRV 202
++I G+ YL I+HRD+K SN+L+++ + ++ DFG + + D +
Sbjct: 119 VSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSF 173
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
GT Y+APE S D++S G+ L+ELA G+ PI
Sbjct: 174 VGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 125/282 (44%), Gaps = 39/282 (13%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILA--RVRHKNLLSLRGYC 103
+G+G FG VY G+ W G ++A++ + + + + A + E++A + RH+N++ G C
Sbjct: 41 IGKGRFGQVYHGR-WHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
I+ + +L+ N+ IA +G+ YLH I+
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVVRDA---KIVLDVNKTRQIAQEIVKGMGYLHAKG---IL 152
Query: 164 HRDIKASNVLLDADFKAQVADFGF---AKLIPDGATHVTTRVK-GTLGYLAPEYAMLGKA 219
H+D+K+ NV D + K + DFG + ++ G R++ G L +LAPE
Sbjct: 153 HKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSP 211
Query: 220 ---------SESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERKFSELA 270
S+ DV++ G + EL + + P K A W + + S++
Sbjct: 212 DTEEDKLPFSKHSDVFALGTIWYELHAREWPF-KTQPA---EAIIWQMGTGMKPNLSQIG 267
Query: 271 DPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLLK 312
+ +E+ ++L C + E+RPT +++D+L+
Sbjct: 268 --------MGKEISDILLF---CWAFEQEERPTFTKLMDMLE 298
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 46 LGEGGFGSVYWGQLW--------DGSQIAVKRLKVWSNKAEM-EFAVEVEILARV-RHKN 95
LGEG FG V + + +AVK LK + + ++ + E+E++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 96 LLSLRGYCAEGQERLIVYDYMP--NXXXXXXXXXXXXXECLLNWNR----------RMDI 143
+++L G C + ++ Y N E + NR +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATH-VTTRV 202
A G+ YL A+ IHRD+ A NVL+ + ++ADFG A+ I + + TT
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLEL 235
+ + ++APE + DV+SFG+L+ E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 35/214 (16%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARV--RHKNLLS----- 98
+G+G +G V+ G W G +AVK ++S++ E + E E+ V RH+N+L
Sbjct: 16 VGKGRYGEVWRGS-WQGENVAVK---IFSSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 99 LRGYCAEGQERLIV-YDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH-- 155
+ + Q LI Y M + CL I + A G+ +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL-------RIVLSIASGLAHLHIE 124
Query: 156 ---HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHV----TTRVKGTLGY 208
P I HRD+K+ N+L+ + + +AD G A + + RV GT Y
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRY 183
Query: 209 LAPEY------AMLGKASESCDVYSFGILLLELA 236
+APE + + D+++FG++L E+A
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 39/216 (18%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARV--RHKNLLSLRGYC 103
+G+G FG V+ G+ W G ++AVK ++S++ E + E EI V RH+N+L G+
Sbjct: 11 IGKGRFGEVWRGK-WRGEEVAVK---IFSSREERSWFREAEIYQTVMLRHENIL---GFI 63
Query: 104 AEGQ-------ERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
A + +V DY + + + +A+ +A G+ +LH
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHM 118
Query: 157 -----HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTT-----RVKGTL 206
P I HRD+K+ N+L+ + +AD G A + D AT RV GT
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRV-GTK 176
Query: 207 GYLAPEY---AMLGKASES---CDVYSFGILLLELA 236
Y+APE ++ K ES D+Y+ G++ E+A
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 39/216 (18%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARV--RHKNLLSLRGYC 103
+G+G FG V+ G+ W G ++AVK ++S++ E + E EI V RH+N+L G+
Sbjct: 50 IGKGRFGEVWRGK-WRGEEVAVK---IFSSREERSWFREAEIYQTVMLRHENIL---GFI 102
Query: 104 AEGQ-------ERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
A + +V DY + + + +A+ +A G+ +LH
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHM 157
Query: 157 -----HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTT-----RVKGTL 206
P I HRD+K+ N+L+ + +AD G A + D AT RV GT
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRV-GTK 215
Query: 207 GYLAPEY---AMLGKASES---CDVYSFGILLLELA 236
Y+APE ++ K ES D+Y+ G++ E+A
Sbjct: 216 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 121/297 (40%), Gaps = 45/297 (15%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQLW------DGSQIAVKRLKVWSNKAEME-FAVEVEILAR 90
+ N LG G FG V + +AVK LK + +E E++IL
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 91 V-RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECL---------LNWNRR 140
+ H N+++L G C + L+V E + L
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 141 MDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI---PDGATH 197
+ + A+G+ +L A+ IHRD+ A N+LL ++ DFG A+ I PD
Sbjct: 147 ICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 203
Query: 198 VTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLE---LASGKKPIEKVNSAIKRTIT 254
R+ L ++APE + DV+SFG+LL E L + P K++ R +
Sbjct: 204 GDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL- 260
Query: 255 DWALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
++ + + P ++ E+ + + L C H +P +RPT E+++ L
Sbjct: 261 ---------KEGTRMRAP----DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 301
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 25/221 (11%)
Query: 33 LHSATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLK---VWSNKAEMEFAVEVEIL 88
++ + KLG G +G V + G++ A+K +K V + EV +L
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVL 75
Query: 89 ARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWN-RRMDIAIGS 147
++ H N++ L + + + +V + E +L +D A+
Sbjct: 76 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFD--------EIILRQKFSEVDAAVIM 127
Query: 148 AE---GIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHVTTR 201
+ G YLH H +I+HRD+K N+LL++ D ++ DFG + G + R
Sbjct: 128 KQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK-MKER 183
Query: 202 VKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
+ GT Y+APE + K E CDV+S G++L L G P
Sbjct: 184 L-GTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPPF 222
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 39/216 (18%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARV--RHKNLLSLRGYC 103
+G+G FG V+ G+ W G ++AVK ++S++ E + E EI V RH+N+L G+
Sbjct: 37 IGKGRFGEVWRGK-WRGEEVAVK---IFSSREERSWFREAEIYQTVMLRHENIL---GFI 89
Query: 104 AEGQ-------ERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
A + +V DY + + + +A+ +A G+ +LH
Sbjct: 90 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHM 144
Query: 157 -----HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTT-----RVKGTL 206
P I HRD+K+ N+L+ + +AD G A + D AT RV GT
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRV-GTK 202
Query: 207 GYLAPEY---AMLGKASES---CDVYSFGILLLELA 236
Y+APE ++ K ES D+Y+ G++ E+A
Sbjct: 203 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 238
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 39/216 (18%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARV--RHKNLLSLRGYC 103
+G+G FG V+ G+ W G ++AVK ++S++ E + E EI V RH+N+L G+
Sbjct: 14 IGKGRFGEVWRGK-WRGEEVAVK---IFSSREERSWFREAEIYQTVMLRHENIL---GFI 66
Query: 104 AEGQ-------ERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
A + +V DY + + + +A+ +A G+ +LH
Sbjct: 67 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHM 121
Query: 157 -----HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTT-----RVKGTL 206
P I HRD+K+ N+L+ + +AD G A + D AT RV GT
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRV-GTK 179
Query: 207 GYLAPEY---AMLGKASES---CDVYSFGILLLELA 236
Y+APE ++ K ES D+Y+ G++ E+A
Sbjct: 180 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 215
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 157 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 151 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 203
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 204 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLL---DADFKAQVADFGFAKLIPDGATHVTTRVKGTL 206
GI YLH H +I+HRDIK N+LL ++ ++ DFG + + R+ GT
Sbjct: 158 GICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK-LRDRL-GTA 212
Query: 207 GYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
Y+APE + K +E CDV+S G+++ L G P
Sbjct: 213 YYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 35/214 (16%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARV--RHKNLLS----- 98
+G+G +G V+ G W G +AVK ++S++ E + E E+ V RH+N+L
Sbjct: 45 VGKGRYGEVWRGS-WQGENVAVK---IFSSRDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 99 LRGYCAEGQERLIV-YDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH-- 155
+ + Q LI Y M + CL I + A G+ +LH
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL-------RIVLSIASGLAHLHIE 153
Query: 156 ---HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHV----TTRVKGTLGY 208
P I HRD+K+ N+L+ + + +AD G A + + RV GT Y
Sbjct: 154 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRY 212
Query: 209 LAPEY------AMLGKASESCDVYSFGILLLELA 236
+APE + + D+++FG++L E+A
Sbjct: 213 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 246
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 39/216 (18%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARV--RHKNLLSLRGYC 103
+G+G FG V+ G+ W G ++AVK ++S++ E + E EI V RH+N+L G+
Sbjct: 17 IGKGRFGEVWRGK-WRGEEVAVK---IFSSREERSWFREAEIYQTVMLRHENIL---GFI 69
Query: 104 AEGQ-------ERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
A + +V DY + + + +A+ +A G+ +LH
Sbjct: 70 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHM 124
Query: 157 -----HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTT-----RVKGTL 206
P I HRD+K+ N+L+ + +AD G A + D AT RV GT
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRV-GTK 182
Query: 207 GYLAPEY---AMLGKASES---CDVYSFGILLLELA 236
Y+APE ++ K ES D+Y+ G++ E+A
Sbjct: 183 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 218
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 101/208 (48%), Gaps = 22/208 (10%)
Query: 46 LGEGGFGSV--YWGQLWDGSQIAVKRLKVWSNKAEMEFAV-EVEILARVRHKNLLSLRGY 102
+GEG +G V + L + ++A+K++ + ++ + + E++IL R RH+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 103 CA-----EGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+ ++ IV D M + + + ++ G+ Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIH-- 145
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PD-GATHVTTRVKGTLGYLAPEYAM 215
+ +++HRD+K SN+LL+ ++ DFG A++ PD T T Y APE +
Sbjct: 146 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 204
Query: 216 LGKA-SESCDVYSFGILLLELASGKKPI 242
K ++S D++S G +L E+ S +PI
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 15/223 (6%)
Query: 46 LGEGGFGSVYWGQLWD----GSQIAVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLSLR 100
+GEG FG V+ G +A+K K S+ +F E + + H +++ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
G E V+ M + L+ + A + + YL +
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SK 130
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKAS 220
+HRDI A NVL+ A ++ DFG ++ + D + ++ K + ++APE + +
Sbjct: 131 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 221 ESCDVYSFGILLLE-LASGKKPIEKV--NSAIKRTITDWALPL 260
+ DV+ FG+ + E L G KP + V N I R LP+
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 233
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 101/208 (48%), Gaps = 22/208 (10%)
Query: 46 LGEGGFGSV--YWGQLWDGSQIAVKRLKVWSNKAEMEFAV-EVEILARVRHKNLLSLRGY 102
+GEG +G V + L + ++A+K++ + ++ + + E++IL R RH+N++ +
Sbjct: 36 IGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 94
Query: 103 CA-----EGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+ ++ IV D M + + + ++ G+ Y+H
Sbjct: 95 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIH-- 146
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PD-GATHVTTRVKGTLGYLAPEYAM 215
+ +++HRD+K SN+LL+ ++ DFG A++ PD T T Y APE +
Sbjct: 147 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 205
Query: 216 LGKA-SESCDVYSFGILLLELASGKKPI 242
K ++S D++S G +L E+ S +PI
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSN-RPI 232
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 15/223 (6%)
Query: 46 LGEGGFGSVYWGQLWDGSQ----IAVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLSLR 100
+GEG FG V+ G +A+K K S+ +F E + + H +++ L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
G E V+ M + L+ + A + + YL +
Sbjct: 75 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 127
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKAS 220
+HRDI A NVL+ ++ ++ DFG ++ + D + ++ K + ++APE + +
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 187
Query: 221 ESCDVYSFGILLLE-LASGKKPIEKV--NSAIKRTITDWALPL 260
+ DV+ FG+ + E L G KP + V N I R LP+
Sbjct: 188 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 230
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 157 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 149 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 201
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 41/226 (18%)
Query: 39 NFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRL-KVWSNKAEME-FAVEVEILARVRHKN 95
N+ +G+G F V + + G ++AV+ + K N + ++ EV I+ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 96 LLSL-------------RGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD 142
++ L Y + G+ V+DY+ +++
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGE----VFDYLVAHGRMKEKEARAKFRQIVS------ 124
Query: 143 IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRV 202
+ Y H I+HRD+KA N+LLDAD ++ADFGF+ G +
Sbjct: 125 -------AVQYCHQK---FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG--NKLDEF 172
Query: 203 KGTLGYLAPEYAMLGKASES--CDVYSFGILLLELASGKKPIEKVN 246
G+ Y APE GK + DV+S G++L L SG P + N
Sbjct: 173 CGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 157 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 157 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPE 209
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 157 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 92/226 (40%), Gaps = 41/226 (18%)
Query: 39 NFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRL-KVWSNKAEME-FAVEVEILARVRHKN 95
N+ +G+G F V + + G ++A+K + K N ++ EV I+ + H N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 96 LLSL-------------RGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD 142
++ L Y + G+ V+DY+ +++
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGE----VFDYLVAHGRMKEKEARSKFRQIVS------ 125
Query: 143 IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRV 202
+ Y H I+HRD+KA N+LLDAD ++ADFGF+ G
Sbjct: 126 -------AVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK--LDAF 173
Query: 203 KGTLGYLAPEYAMLGKASES--CDVYSFGILLLELASGKKPIEKVN 246
G Y APE GK + DV+S G++L L SG P + N
Sbjct: 174 CGAPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 157 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 157 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 149 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 201
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 122/293 (41%), Gaps = 49/293 (16%)
Query: 46 LGEGGFGSVYWGQLW------DGSQIAVKRLKVWSNKAEME-FAVEVEILARV-RHKNLL 97
LG G FG V + +AVK LK + +E E++IL + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 98 SLRGYCAE-GQERLIVYDYMP------------NXXXXXXXXXXXXXECLLNWNRRMDIA 144
+L G C + G +++ ++ N + L + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 145 IGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI---PDGATHVTTR 201
A+G+ +L A+ IHRD+ A N+LL ++ DFG A+ I PD R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 202 VKGTLGYLAPEYAMLGKASESCDVYSFGILLLE---LASGKKPIEKVNSAIKRTITDWAL 258
+ L ++APE + DV+SFG+LL E L + P K++ R +
Sbjct: 212 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL----- 264
Query: 259 PLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
++ + + P ++ E+ + + L C H +P +RPT E+++ L
Sbjct: 265 -----KEGTRMRAP----DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 15/223 (6%)
Query: 46 LGEGGFGSVYWGQLWDGSQ----IAVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLSLR 100
+GEG FG V+ G +A+K K S+ +F E + + H +++ L
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
G E V+ M + L+ + A + + YL +
Sbjct: 80 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 132
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKAS 220
+HRDI A NVL+ ++ ++ DFG ++ + D + ++ K + ++APE + +
Sbjct: 133 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 192
Query: 221 ESCDVYSFGILLLE-LASGKKPIEKV--NSAIKRTITDWALPL 260
+ DV+ FG+ + E L G KP + V N I R LP+
Sbjct: 193 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 235
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 122/293 (41%), Gaps = 49/293 (16%)
Query: 46 LGEGGFGSVYWGQLW------DGSQIAVKRLKVWSNKAEME-FAVEVEILARV-RHKNLL 97
LG G FG V + +AVK LK + +E E++IL + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 98 SLRGYCAE-GQERLIVYDYMP------------NXXXXXXXXXXXXXECLLNWNRRMDIA 144
+L G C + G +++ ++ N + L + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 145 IGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI---PDGATHVTTR 201
A+G+ +L A+ IHRD+ A N+LL ++ DFG A+ I PD R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 202 VKGTLGYLAPEYAMLGKASESCDVYSFGILLLE---LASGKKPIEKVNSAIKRTITDWAL 258
+ L ++APE + DV+SFG+LL E L + P K++ R +
Sbjct: 203 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL----- 255
Query: 259 PLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
++ + + P ++ E+ + + L C H +P +RPT E+++ L
Sbjct: 256 -----KEGTRMRAP----DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 296
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 177 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 229
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D +VADFGFAK + T + GT YLAPE
Sbjct: 157 YLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 142 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPE 194
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 195 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D +VADFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 122/293 (41%), Gaps = 49/293 (16%)
Query: 46 LGEGGFGSVYWGQLW------DGSQIAVKRLKVWSNKAEME-FAVEVEILARV-RHKNLL 97
LG G FG V + +AVK LK + +E E++IL + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 98 SLRGYCAE-GQERLIVYDYMP------------NXXXXXXXXXXXXXECLLNWNRRMDIA 144
+L G C + G +++ ++ N + L + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 145 IGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI---PDGATHVTTR 201
A+G+ +L A+ IHRD+ A N+LL ++ DFG A+ I PD R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 202 VKGTLGYLAPEYAMLGKASESCDVYSFGILLLE---LASGKKPIEKVNSAIKRTITDWAL 258
+ L ++APE + DV+SFG+LL E L + P K++ R +
Sbjct: 212 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL----- 264
Query: 259 PLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
++ + + P ++ E+ + + L C H +P +RPT E+++ L
Sbjct: 265 -----KEGTRMRAP----DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 177 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 229
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 143 YLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 195
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 196 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 41/226 (18%)
Query: 39 NFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRL-KVWSNKAEME-FAVEVEILARVRHKN 95
N+ +G+G F V + + G ++AVK + K N + ++ EV I+ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 96 LLSL-------------RGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD 142
++ L Y + G+ V+DY+ +++
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGE----VFDYLVAHGRMKEKEARAKFRQIVS------ 124
Query: 143 IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRV 202
+ Y H I+HRD+KA N+LLDAD ++ADFGF+ G +
Sbjct: 125 -------AVQYCHQK---FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG--NKLDAF 172
Query: 203 KGTLGYLAPEYAMLGKASES--CDVYSFGILLLELASGKKPIEKVN 246
G Y APE GK + DV+S G++L L SG P + N
Sbjct: 173 CGAPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D +VADFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 15/223 (6%)
Query: 46 LGEGGFGSVYWGQLWDGSQ----IAVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLSLR 100
+GEG FG V+ G +A+K K S+ +F E + + H +++ L
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
G E V+ M + L+ + A + + YL +
Sbjct: 81 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 133
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKAS 220
+HRDI A NVL+ ++ ++ DFG ++ + D + ++ K + ++APE + +
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 193
Query: 221 ESCDVYSFGILLLE-LASGKKPIEKV--NSAIKRTITDWALPL 260
+ DV+ FG+ + E L G KP + V N I R LP+
Sbjct: 194 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 236
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D +VADFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 122/293 (41%), Gaps = 49/293 (16%)
Query: 46 LGEGGFGSVYWGQLW------DGSQIAVKRLKVWSNKAEME-FAVEVEILARV-RHKNLL 97
LG G FG V + +AVK LK + +E E++IL + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 98 SLRGYCAE-GQERLIVYDYMP------------NXXXXXXXXXXXXXECLLNWNRRMDIA 144
+L G C + G +++ ++ N + L + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 145 IGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI---PDGATHVTTR 201
A+G+ +L A+ IHRD+ A N+LL ++ DFG A+ I PD R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 202 VKGTLGYLAPEYAMLGKASESCDVYSFGILLLE---LASGKKPIEKVNSAIKRTITDWAL 258
+ L ++APE + DV+SFG+LL E L + P K++ R +
Sbjct: 203 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL----- 255
Query: 259 PLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
++ + + P ++ E+ + + L C H +P +RPT E+++ L
Sbjct: 256 -----KEGTRMRAP----DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 296
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 15/223 (6%)
Query: 46 LGEGGFGSVYWGQLWD----GSQIAVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLSLR 100
+GEG FG V+ G +A+K K S+ +F E + + H +++ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
G E V+ M + L+ + A + + YL +
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 130
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKAS 220
+HRDI A NVL+ ++ ++ DFG ++ + D + ++ K + ++APE + +
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 221 ESCDVYSFGILLLE-LASGKKPIEKV--NSAIKRTITDWALPL 260
+ DV+ FG+ + E L G KP + V N I R LP+
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 233
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 95/233 (40%), Gaps = 23/233 (9%)
Query: 23 PTWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKA----E 78
P W K+ + +++ + LG G F V + D + +K + +A E
Sbjct: 8 PRW-----KQAEDIRDIYDFRDVLGTGAFSEVILAE--DKRTQKLVAIKCIAKEALEGKE 60
Query: 79 MEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWN 138
E+ +L +++H N+++L G ++ + +
Sbjct: 61 GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVE----KGFYTER 116
Query: 139 RRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVL---LDADFKAQVADFGFAKLIPDGA 195
+ + + YLH I+HRD+K N+L LD D K ++DFG +K+ G+
Sbjct: 117 DASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 196 THVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSA 248
V + GT GY+APE S++ D +S G++ L G P N A
Sbjct: 174 --VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA 224
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAK--LIPDGATHVTTRVKGTLGYLA 210
YLH II+RD+K NVLLD++ ++ D+G K L P G T T+ GT Y+A
Sbjct: 136 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDT--TSXFCGTPNYIA 189
Query: 211 PEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSA 248
PE S D ++ G+L+ E+ +G+ P + V S+
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSS 227
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 99/219 (45%), Gaps = 26/219 (11%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWGQLWD---GSQIAVKRLKVWSNKAEMEFAVEVEI 87
+E+H AT+ +LG G FG V+ ++ D G Q AVK++++ +AE E+
Sbjct: 90 EEVHWATHQL----RLGRGSFGEVH--RMEDKQTGFQCAVKKVRLEVFRAE-----ELMA 138
Query: 88 LARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS 147
A + ++ L G EG V +M CL +R + +
Sbjct: 139 CAGLTSPRIVPLYGAVREGP---WVNIFMELLEGGSLGQLVKEQGCLPE-DRALYYLGQA 194
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFK-AQVADFGFAK-LIPDG---ATHVTTRV 202
EG+ YLH I+H D+KA NVLL +D A + DFG A L PDG + +
Sbjct: 195 LEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYI 251
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKP 241
GT ++APE + DV+S ++L + +G P
Sbjct: 252 PGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 19/105 (18%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHVTTRVK--- 203
GI Y+H + I+HRD+K N+LL++ D ++ DFG + TH K
Sbjct: 138 GITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKD 187
Query: 204 --GTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVN 246
GT Y+APE + G E CDV+S G++L L SG P N
Sbjct: 188 KIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGAN 231
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 15/223 (6%)
Query: 46 LGEGGFGSVYWGQLWDGSQ----IAVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLSLR 100
+GEG FG V+ G +A+K K S+ +F E + + H +++ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
G E V+ M + L+ + A + + YL +
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 130
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKAS 220
+HRDI A NVL+ ++ ++ DFG ++ + D + ++ K + ++APE + +
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 221 ESCDVYSFGILLLE-LASGKKPIEKV--NSAIKRTITDWALPL 260
+ DV+ FG+ + E L G KP + V N I R LP+
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 233
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 70/160 (43%), Gaps = 20/160 (12%)
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGY 208
+G+ YLH IHRDIKA+NVLL ++ADFG A + D V GT +
Sbjct: 127 KGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFW 182
Query: 209 LAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERKFSE 268
+APE D++S GI +ELA G+ P NS + P+ +
Sbjct: 183 MAPEVIKQSAYDFKADIWSLGITAIELAKGEPP----NSDLH--------PMRVLFLIPK 230
Query: 269 LADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
+ P L G + K V C + P RPT E+L
Sbjct: 231 NSPPTLEGQH-SKPFKEFVEA---CLNKDPRFRPTAKELL 266
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 95/233 (40%), Gaps = 23/233 (9%)
Query: 23 PTWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKA----E 78
P W K+ + +++ + LG G F V + D + +K + +A E
Sbjct: 8 PRW-----KQAEDIRDIYDFRDVLGTGAFSEVILAE--DKRTQKLVAIKCIAKEALEGKE 60
Query: 79 MEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWN 138
E+ +L +++H N+++L G ++ + +
Sbjct: 61 GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVE----KGFYTER 116
Query: 139 RRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVL---LDADFKAQVADFGFAKLIPDGA 195
+ + + YLH I+HRD+K N+L LD D K ++DFG +K+ G+
Sbjct: 117 DASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 196 THVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSA 248
V + GT GY+APE S++ D +S G++ L G P N A
Sbjct: 174 --VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA 224
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAK--LIPDGATHVTTRVKGTLGYLA 210
YLH II+RD+K NVLLD++ ++ D+G K L P G T T+ GT Y+A
Sbjct: 168 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDT--TSTFCGTPNYIA 221
Query: 211 PEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSA 248
PE S D ++ G+L+ E+ +G+ P + V S+
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSS 259
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 122/293 (41%), Gaps = 49/293 (16%)
Query: 46 LGEGGFGSVYWGQLW------DGSQIAVKRLKVWSNKAEME-FAVEVEILARV-RHKNLL 97
LG G FG V + +AVK LK + +E E++IL + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 98 SLRGYCAE-GQERLIVYDYMP------------NXXXXXXXXXXXXXECLLNWNRRMDIA 144
+L G C + G +++ ++ N + L + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 145 IGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI---PDGATHVTTR 201
A+G+ +L A+ IHRD+ A N+LL ++ DFG A+ I PD R
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 202 VKGTLGYLAPEYAMLGKASESCDVYSFGILLLE---LASGKKPIEKVNSAIKRTITDWAL 258
+ L ++APE + DV+SFG+LL E L + P K++ R +
Sbjct: 214 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL----- 266
Query: 259 PLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
++ + + P ++ E+ + + L C H +P +RPT E+++ L
Sbjct: 267 -----KEGTRMRAP----DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 307
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
Query: 143 IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRV 202
+ + E ++ L + IIHRD+K N+LLD + DF A ++P T +TT +
Sbjct: 117 VKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP-RETQITT-M 174
Query: 203 KGTLGYLAPEYAMLGKA---SESCDVYSFGILLLELASGKKPIEKVNSAIKRTIT 254
GT Y+APE K S + D +S G+ EL G++P +S + I
Sbjct: 175 AGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV 229
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 19/105 (18%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHVTTRVK--- 203
GI Y+H + I+HRD+K N+LL++ D ++ DFG + TH K
Sbjct: 161 GITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKD 210
Query: 204 --GTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVN 246
GT Y+APE + G E CDV+S G++L L SG P N
Sbjct: 211 KIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGAN 254
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 122/293 (41%), Gaps = 49/293 (16%)
Query: 46 LGEGGFGSVYWGQLW------DGSQIAVKRLKVWSNKAEME-FAVEVEILARV-RHKNLL 97
LG G FG V + +AVK LK + +E E++IL + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 98 SLRGYCAE-GQERLIVYDYMP------------NXXXXXXXXXXXXXECLLNWNRRMDIA 144
+L G C + G +++ ++ N + L + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 145 IGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI---PDGATHVTTR 201
A+G+ +L A+ IHRD+ A N+LL ++ DFG A+ I PD R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 202 VKGTLGYLAPEYAMLGKASESCDVYSFGILLLE---LASGKKPIEKVNSAIKRTITDWAL 258
+ L ++APE + DV+SFG+LL E L + P K++ R +
Sbjct: 212 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL----- 264
Query: 259 PLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
++ + + P ++ E+ + + L C H +P +RPT E+++ L
Sbjct: 265 -----KEGTRMRAP----DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 95/233 (40%), Gaps = 23/233 (9%)
Query: 23 PTWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKA----E 78
P W K+ + +++ + LG G F V + D + +K + +A E
Sbjct: 8 PRW-----KQAEDIRDIYDFRDVLGTGAFSEVILAE--DKRTQKLVAIKCIAKEALEGKE 60
Query: 79 MEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWN 138
E+ +L +++H N+++L G ++ + +
Sbjct: 61 GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVE----KGFYTER 116
Query: 139 RRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVL---LDADFKAQVADFGFAKLIPDGA 195
+ + + YLH I+HRD+K N+L LD D K ++DFG +K+ G+
Sbjct: 117 DASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 196 THVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSA 248
V + GT GY+APE S++ D +S G++ L G P N A
Sbjct: 174 --VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA 224
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAK--LIPDGATHVTTRVKGTLGYLA 210
YLH II+RD+K NVLLD++ ++ D+G K L P G T T+ GT Y+A
Sbjct: 121 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDT--TSXFCGTPNYIA 174
Query: 211 PEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSA 248
PE S D ++ G+L+ E+ +G+ P + V S+
Sbjct: 175 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSS 212
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+++D QV DFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 19/105 (18%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHVTTRVK--- 203
GI Y+H + I+HRD+K N+LL++ D ++ DFG + TH K
Sbjct: 162 GITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKD 211
Query: 204 --GTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVN 246
GT Y+APE + G E CDV+S G++L L SG P N
Sbjct: 212 KIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGAN 255
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 99/207 (47%), Gaps = 27/207 (13%)
Query: 44 NKLGEGGFGSVYWGQ--LWDGSQIAVKRLKVWSNKAEMEFAV-EVEILARVRHKNLLSLR 100
+KLGEG + +VY G+ L D + +A+K +++ + A+ EV +L ++H N+++L
Sbjct: 8 DKLGEGTYATVYKGKSKLTD-NLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXEC--LLNWNRRMDIAIGSAEGIVYLHHHA 158
+ +V++Y+ +C ++N + G+ Y H
Sbjct: 67 DIIHTEKSLTLVFEYL------DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK 120
Query: 159 TPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG----TLGYLAPEYA 214
++HRD+K N+L++ + ++ADFG A+ A + T+ TL Y P+
Sbjct: 121 ---VLHRDLKPQNLLINERGELKLADFGLAR-----AKSIPTKTYDNEVVTLWYRPPD-I 171
Query: 215 MLGKA--SESCDVYSFGILLLELASGK 239
+LG S D++ G + E+A+G+
Sbjct: 172 LLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 46 LGEGGFGSVYWGQLWDGS---QIAVKRLKVWSNKAEMEFAV-EVEILARVRHKNLLSLRG 101
+GEG +G V +D ++A+K++ + ++ + + E++IL RH+N++ +
Sbjct: 33 IGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 102 YCA-----EGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+ ++ IV D M + + + ++ G+ Y+H
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIH- 143
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PD-GATHVTTRVKGTLGYLAPEYA 214
+ +++HRD+K SN+LL+ ++ DFG A++ PD T T T Y APE
Sbjct: 144 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 215 MLGKA-SESCDVYSFGILLLELASGKKPI 242
+ K ++S D++S G +L E+ S +PI
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSN-RPI 229
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 15/223 (6%)
Query: 46 LGEGGFGSVYWGQLWDGSQ----IAVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLSLR 100
+GEG FG V+ G +A+K K S+ +F E + + H +++ L
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
G E V+ M + L+ + A + + YL +
Sbjct: 83 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 135
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKAS 220
+HRDI A NVL+ ++ ++ DFG ++ + D + ++ K + ++APE + +
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 195
Query: 221 ESCDVYSFGILLLE-LASGKKPIEKV--NSAIKRTITDWALPL 260
+ DV+ FG+ + E L G KP + V N I R LP+
Sbjct: 196 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 238
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAK--LIPDGATHVTTRVKGTLGYLA 210
YLH II+RD+K NVLLD++ ++ D+G K L P G T T+ GT Y+A
Sbjct: 125 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDT--TSXFCGTPNYIA 178
Query: 211 PEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSA 248
PE S D ++ G+L+ E+ +G+ P + V S+
Sbjct: 179 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSS 216
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 38/223 (17%)
Query: 46 LGEGGFGSVYWGQLWD-----GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLR 100
LG+GGF + D +I K L + ++ E + ++E+ I + H++++
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE-KMSMEISIHRSLAHQHVVGFH 105
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----------G 150
G+ + +V + LL ++R A+ E G
Sbjct: 106 GFFEDNDFVFVVLELC-------------RRRSLLELHKRRK-ALTEPEARYYLRQIVLG 151
Query: 151 IVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFA-KLIPDGATHVTTRVKGTLGYL 209
YLH + +IHRD+K N+ L+ D + ++ DFG A K+ DG + GT Y+
Sbjct: 152 CQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYI 206
Query: 210 APEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRT 252
APE S DV+S G ++ L GK P E S +K T
Sbjct: 207 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE--TSCLKET 247
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 19/105 (18%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHVTTRVK--- 203
GI Y+H + I+HRD+K N+LL++ D ++ DFG + TH K
Sbjct: 144 GITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKD 193
Query: 204 --GTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVN 246
GT Y+APE + G E CDV+S G++L L SG P N
Sbjct: 194 KIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGAN 237
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 119/291 (40%), Gaps = 47/291 (16%)
Query: 46 LGEGGFGSVYWGQLW------DGSQIAVKRLKVWSNKAEME-FAVEVEILARV-RHKNLL 97
LG G FG V + +AVK LK + +E E++IL + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 98 SLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECL-----------LNWNRRMDIAIG 146
+L G C + L+V E + L + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 147 SAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI---PDGATHVTTRVK 203
A+G+ +L A+ IHRD+ A N+LL ++ DFG A+ I PD R+
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL- 212
Query: 204 GTLGYLAPEYAMLGKASESCDVYSFGILLLE---LASGKKPIEKVNSAIKRTITDWALPL 260
L ++APE + DV+SFG+LL E L + P K++ R +
Sbjct: 213 -PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL------- 264
Query: 261 ACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
++ + + P ++ E+ + + L C H +P +RPT E+++ L
Sbjct: 265 ---KEGTRMRAP----DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 22/210 (10%)
Query: 40 FNYDNKLGEGGFGSVYWGQLWD---GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNL 96
+ +LG G FG V+ ++ D G Q AVK++++ + E E+ A + +
Sbjct: 74 MTHQPRLGRGSFGEVH--RMKDKQTGFQCAVKKVRLEVFRVE-----ELVACAGLSSPRI 126
Query: 97 LSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+ L G EG V +M CL +R + + EG+ YLH
Sbjct: 127 VPLYGAVREGP---WVNIFMELLEGGSLGQLIKQMGCLPE-DRALYYLGQALEGLEYLH- 181
Query: 157 HATPHIIHRDIKASNVLLDAD-FKAQVADFGFA-KLIPDG---ATHVTTRVKGTLGYLAP 211
T I+H D+KA NVLL +D +A + DFG A L PDG + + GT ++AP
Sbjct: 182 --TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP 239
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKP 241
E M D++S ++L + +G P
Sbjct: 240 EVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWGQLWD---GSQIAVKRLKVWSNKAEMEFAVEVEI 87
+E+H AT+ +LG G FG V+ ++ D G Q AVK++++ +AE E+
Sbjct: 71 EEVHWATHQL----RLGRGSFGEVH--RMEDKQTGFQCAVKKVRLEVFRAE-----ELMA 119
Query: 88 LARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGS 147
A + ++ L G EG V +M CL +R + +
Sbjct: 120 CAGLTSPRIVPLYGAVREGP---WVNIFMELLEGGSLGQLVKEQGCLPE-DRALYYLGQA 175
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFK-AQVADFGFAK-LIPDGATH---VTTRV 202
EG+ YLH I+H D+KA NVLL +D A + DFG A L PDG +
Sbjct: 176 LEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYI 232
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKP 241
GT ++APE + DV+S ++L + +G P
Sbjct: 233 PGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 15/223 (6%)
Query: 46 LGEGGFGSVYWGQLWDGSQ----IAVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLSLR 100
+GEG FG V+ G +A+K K S+ +F E + + H +++ L
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
G E V+ M + L+ + A + + YL +
Sbjct: 106 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 158
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKAS 220
+HRDI A NVL+ ++ ++ DFG ++ + D + ++ K + ++APE + +
Sbjct: 159 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 218
Query: 221 ESCDVYSFGILLLE-LASGKKPIEKV--NSAIKRTITDWALPL 260
+ DV+ FG+ + E L G KP + V N I R LP+
Sbjct: 219 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 261
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 46 LGEGGFGSVYWGQLWDGS---QIAVKRLKVWSNKAEMEFAV-EVEILARVRHKNLLSLRG 101
+GEG +G V +D ++A+K++ + ++ + + E++IL R RH+N++ +
Sbjct: 51 IGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPH 161
+ Y+ + L N + G+ Y+H + +
Sbjct: 109 IIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSN-DHICYFLYQILRGLKYIH---SAN 164
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLI-PD-GATHVTTRVKGTLGYLAPEYAMLGKA 219
++HRD+K SN+LL+ ++ DFG A++ PD T T T Y APE + K
Sbjct: 165 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 224
Query: 220 -SESCDVYSFGILLLELASGKKPI 242
++S D++S G +L E+ S +PI
Sbjct: 225 YTKSIDIWSVGCILAEMLSN-RPI 247
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ ++A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 15/223 (6%)
Query: 46 LGEGGFGSVYWGQLWD----GSQIAVKRLK-VWSNKAEMEFAVEVEILARVRHKNLLSLR 100
+GEG FG V+ G +A+K K S+ +F E + + H +++ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
G E V+ M + L+ + A + + YL +
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SK 130
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKAS 220
+HRDI A NVL+ ++ ++ DFG ++ + D ++ K + ++APE + +
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFT 190
Query: 221 ESCDVYSFGILLLE-LASGKKPIEKV--NSAIKRTITDWALPL 260
+ DV+ FG+ + E L G KP + V N I R LP+
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 233
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 122/293 (41%), Gaps = 49/293 (16%)
Query: 46 LGEGGFGSVYWGQLW------DGSQIAVKRLKVWSNKAEME-FAVEVEILARV-RHKNLL 97
LG G FG V + +AVK LK + +E E++IL + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 98 SLRGYCAE-GQERLIVYDYMP------------NXXXXXXXXXXXXXECLLNWNRRMDIA 144
+L G C + G +++ ++ N + L + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 145 IGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI---PDGATHVTTR 201
A+G+ +L A+ IHRD+ A N+LL ++ DFG A+ I PD R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 202 VKGTLGYLAPEYAMLGKASESCDVYSFGILLLE---LASGKKPIEKVNSAIKRTITDWAL 258
+ L ++APE + DV+SFG+LL E L + P K++ R +
Sbjct: 203 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL----- 255
Query: 259 PLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
++ + + P ++ E+ + + L C H +P +RPT E+++ L
Sbjct: 256 -----KEGTRMRAP----DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 296
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 38/223 (17%)
Query: 46 LGEGGFGSVYWGQLWD-----GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLR 100
LG+GGF + D +I K L + ++ E + ++E+ I + H++++
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE-KMSMEISIHRSLAHQHVVGFH 107
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----------G 150
G+ + +V + LL ++R A+ E G
Sbjct: 108 GFFEDNDFVFVVLELC-------------RRRSLLELHKRRK-ALTEPEARYYLRQIVLG 153
Query: 151 IVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFA-KLIPDGATHVTTRVKGTLGYL 209
YLH + +IHRD+K N+ L+ D + ++ DFG A K+ DG + GT Y+
Sbjct: 154 CQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYI 208
Query: 210 APEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRT 252
APE S DV+S G ++ L GK P E S +K T
Sbjct: 209 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE--TSCLKET 249
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 122/293 (41%), Gaps = 49/293 (16%)
Query: 46 LGEGGFGSVYWGQLW------DGSQIAVKRLKVWSNKAEME-FAVEVEILARV-RHKNLL 97
LG G FG V + +AVK LK + +E E++IL + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 98 SLRGYCAE-GQERLIVYDYMP------------NXXXXXXXXXXXXXECLLNWNRRMDIA 144
+L G C + G +++ ++ N + L + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 145 IGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI---PDGATHVTTR 201
A+G+ +L A+ IHRD+ A N+LL ++ DFG A+ I PD R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 202 VKGTLGYLAPEYAMLGKASESCDVYSFGILLLE---LASGKKPIEKVNSAIKRTITDWAL 258
+ L ++APE + DV+SFG+LL E L + P K++ R +
Sbjct: 203 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL----- 255
Query: 259 PLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
++ + + P ++ E+ + + L C H +P +RPT E+++ L
Sbjct: 256 -----KEGTRMRAP----DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 296
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 143 IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRV 202
++I +G+ YL I+HRD+K SN+L+++ + ++ DFG + + D +
Sbjct: 136 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSF 190
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
GT Y++PE S D++S G+ L+E+A G+ PI
Sbjct: 191 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 36/217 (16%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEI--LARVRHKNLLSL---- 99
+G G +G+VY G L D +AVK V+S F E I + + H N+
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVK---VFSFANRQNFINEKNIYRVPLMEHDNIARFIVGD 76
Query: 100 RGYCAEGQ-ERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH--- 155
A+G+ E L+V +Y PN +W +A G+ YLH
Sbjct: 77 ERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-----DWVSSCRLAHSVTRGLAYLHTEL 131
Query: 156 ---HHATPHIIHRDIKASNVLLDADFKAQVADFGFA------KLI-PDGATHVTTRVKGT 205
H P I HRD+ + NVL+ D ++DFG + +L+ P + GT
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGT 191
Query: 206 LGYLAPEY---AMLGKASESC----DVYSFGILLLEL 235
+ Y+APE A+ + ES D+Y+ G++ E+
Sbjct: 192 IRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+++D QV DFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IIISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 46 LGEGGFGSVYWGQLWDGS---QIAVKRLKVWSNKAEMEFAV-EVEILARVRHKNLLSLRG 101
+GEG +G V +D ++A+K++ + ++ + + E++IL RH+N++ +
Sbjct: 33 IGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 102 YCA-----EGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+ ++ IV D M + + + ++ G+ Y+H
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI------LRGLKYIH- 143
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PD-GATHVTTRVKGTLGYLAPEYA 214
+ +++HRD+K SN+LL+ ++ DFG A++ PD T T T Y APE
Sbjct: 144 --SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 215 MLGKA-SESCDVYSFGILLLELASGKKPI 242
+ K ++S D++S G +L E+ S +PI
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSN-RPI 229
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 107/238 (44%), Gaps = 49/238 (20%)
Query: 33 LHSATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLKVWSNKAEMEFAV----EVEI 87
+++ +++F + LGEG +G V G +A+K+++ + FA+ E++I
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL---FALRTLREIKI 62
Query: 88 LARVRHKNLLSL----RGYCAEG-QERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD 142
L +H+N++++ R E E I+ + M + +R +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-----------------DLHRVIS 105
Query: 143 IAIGSAEGIVYLHHHAT--------PHIIHRDIKASNVLLDADFKAQVADFGFAKLI--- 191
+ S + I Y + ++IHRD+K SN+L++++ +V DFG A++I
Sbjct: 106 TQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165
Query: 192 ------PDGATHVTTRVKGTLGYLAPEYAML-GKASESCDVYSFGILLLELASGKKPI 242
P G T T Y APE + K S + DV+S G +L EL ++PI
Sbjct: 166 AADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 122/293 (41%), Gaps = 49/293 (16%)
Query: 46 LGEGGFGSVYWGQLW------DGSQIAVKRLKVWSNKAEME-FAVEVEILARV-RHKNLL 97
LG G FG V + +AVK LK + +E E++IL + H N++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 98 SLRGYCAE-GQERLIVYDYMP------------NXXXXXXXXXXXXXECLLNWNRRMDIA 144
+L G C + G +++ ++ N + L + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 145 IGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI---PDGATHVTTR 201
A+G+ +L A+ IHRD+ A N+LL ++ DFG A+ I PD R
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 202 VKGTLGYLAPEYAMLGKASESCDVYSFGILLLE---LASGKKPIEKVNSAIKRTITDWAL 258
+ L ++APE + DV+SFG+LL E L + P K++ R +
Sbjct: 249 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL----- 301
Query: 259 PLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
++ + + P ++ E+ + + L C H +P +RPT E+++ L
Sbjct: 302 -----KEGTRMRAP----DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 342
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 98/235 (41%), Gaps = 33/235 (14%)
Query: 46 LGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV-EVEILARVRHKNLLSLRGYC 103
LG GGFG V+ + D A+KR+++ + + E + EV+ LA++ H ++
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 104 AE--GQERLI-----VYDYMPNXXXXXXXXXX-XXXECLLNWNRR---MDIAIGSAEGIV 152
E E+L VY Y+ C + R + I + AE +
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVE 132
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAK-----------LIPDGATHVTTR 201
+LH ++HRD+K SN+ D +V DFG L P A T
Sbjct: 133 FLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTG 189
Query: 202 VKGTLGYLAPEYAMLGKASESCDVYSFGILLLELA-SGKKPIEKVNSAIKRTITD 255
GT Y++PE S D++S G++L EL +E+V RT+TD
Sbjct: 190 QVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERV-----RTLTD 239
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 143 IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRV 202
++I +G+ YL I+HRD+K SN+L+++ + ++ DFG + + D +
Sbjct: 128 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSF 182
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
GT Y++PE S D++S G+ L+E+A G+ PI
Sbjct: 183 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 143 IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRV 202
++I +G+ YL I+HRD+K SN+L+++ + ++ DFG + + D +
Sbjct: 171 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSF 225
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
GT Y++PE S D++S G+ L+E+A G+ PI
Sbjct: 226 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 107/238 (44%), Gaps = 49/238 (20%)
Query: 33 LHSATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLKVWSNKAEMEFAV----EVEI 87
+++ +++F + LGEG +G V G +A+K+++ + FA+ E++I
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL---FALRTLREIKI 62
Query: 88 LARVRHKNLLSL----RGYCAEG-QERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD 142
L +H+N++++ R E E I+ + M + +R +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-----------------DLHRVIS 105
Query: 143 IAIGSAEGIVYLHHHAT--------PHIIHRDIKASNVLLDADFKAQVADFGFAKLI--- 191
+ S + I Y + ++IHRD+K SN+L++++ +V DFG A++I
Sbjct: 106 TQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165
Query: 192 ------PDGATHVTTRVKGTLGYLAPEYAML-GKASESCDVYSFGILLLELASGKKPI 242
P G T T Y APE + K S + DV+S G +L EL ++PI
Sbjct: 166 AADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 128/305 (41%), Gaps = 62/305 (20%)
Query: 39 NFNYDNKLGEGGFGSVYWGQLW------DGSQIAVKRLKVWSNKAEM-EFAVEVEILARV 91
N LGEG FG V + + +AVK LK ++ +E+ + E +L +V
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 92 RHKNLLSLRGYCAEGQERLIVYDY--------------------MPNXXXXXXXXXXXXX 131
H +++ L G C++ L++ +Y + +
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 132 ECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI 191
E L + A ++G+ YL A ++HRD+ A N+L+ K +++DFG ++ +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 192 PDGATHVTTRVKGTLG--YLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+ ++V R +G + ++A E + DV+SFG+LL E+ + G P +
Sbjct: 201 YEEDSYV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP- 258
Query: 249 IKRTITDWALPLACERKFSELADPRLNGNFVE------EELKRVVLVALTCAHSKPEKRP 302
ER F+ L G+ +E EE+ R++ L C +P+KRP
Sbjct: 259 --------------ERLFNLLK----TGHRMERPDNCSEEMYRLM---LQCWKQEPDKRP 297
Query: 303 TMLEV 307
++
Sbjct: 298 VFADI 302
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 92/240 (38%), Gaps = 44/240 (18%)
Query: 28 FSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEI 87
L L F +G G +G VY G+ Q+A ++ + E E E+ +
Sbjct: 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINM 73
Query: 88 LARV-RHKNLLSLRG-------------------YCAEGQERLIVYDYMPNXXXXXXXXX 127
L + H+N+ + G +C G V D + N
Sbjct: 74 LKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGS----VTDLIKNTKGNTLKEE 129
Query: 128 XXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGF 187
C R + G+ +LH H +IHRDIK NVLL + + ++ DFG
Sbjct: 130 WIAYIC-----REI------LRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGV 175
Query: 188 AKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC-----DVYSFGILLLELASGKKPI 242
+ + T + GT ++APE + ++ D++S GI +E+A G P+
Sbjct: 176 SAQLDRTVGRRNTFI-GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 38/223 (17%)
Query: 46 LGEGGFGSVYWGQLWD-----GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLR 100
LG+GGF + D +I K L + ++ E + ++E+ I + H++++
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE-KMSMEISIHRSLAHQHVVGFH 81
Query: 101 GYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE----------G 150
G+ + +V + LL ++R A+ E G
Sbjct: 82 GFFEDNDFVFVVLELC-------------RRRSLLELHKRRK-ALTEPEARYYLRQIVLG 127
Query: 151 IVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFA-KLIPDGATHVTTRVKGTLGYL 209
YLH + +IHRD+K N+ L+ D + ++ DFG A K+ DG + GT Y+
Sbjct: 128 CQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYI 182
Query: 210 APEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRT 252
APE S DV+S G ++ L GK P E S +K T
Sbjct: 183 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE--TSCLKET 223
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 22/210 (10%)
Query: 40 FNYDNKLGEGGFGSVYWGQLWD---GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNL 96
+ ++G G FG V+ ++ D G Q AVK++++ + E E+ A + +
Sbjct: 76 MTHQPRVGRGSFGEVH--RMKDKQTGFQCAVKKVRLEVFRVE-----ELVACAGLSSPRI 128
Query: 97 LSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+ L G EG V +M CL +R + + EG+ YLH
Sbjct: 129 VPLYGAVREGP---WVNIFMELLEGGSLGQLIKQMGCLPE-DRALYYLGQALEGLEYLH- 183
Query: 157 HATPHIIHRDIKASNVLLDAD-FKAQVADFGFA-KLIPDG---ATHVTTRVKGTLGYLAP 211
T I+H D+KA NVLL +D +A + DFG A L PDG + + GT ++AP
Sbjct: 184 --TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP 241
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKP 241
E M D++S ++L + +G P
Sbjct: 242 EVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 143 IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRV 202
++I +G+ YL I+HRD+K SN+L+++ + ++ DFG + + D +
Sbjct: 109 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSF 163
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
GT Y++PE S D++S G+ L+E+A G+ PI
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 143 IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRV 202
++I +G+ YL I+HRD+K SN+L+++ + ++ DFG + + D +
Sbjct: 109 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSF 163
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
GT Y++PE S D++S G+ L+E+A G+ PI
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 104/241 (43%), Gaps = 39/241 (16%)
Query: 30 LKELHSATNNFNYDNKLGEGGFGSV---------YWGQLWDGSQIAVKRLKVWSNKAEM- 79
+KE N++ L +G F + Y + ++ S + KR SN ++
Sbjct: 23 VKEKDKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKIS 82
Query: 80 ------EFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXEC 133
+F E++I+ ++++ L+ G E I+Y+YM N
Sbjct: 83 IKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFF---- 138
Query: 134 LLNWNRRMDIAIGSAEGIV------YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGF 187
+L+ N I I + I+ + + H +I HRD+K SN+L+D + + +++DFG
Sbjct: 139 VLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGE 198
Query: 188 AKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASES------CDVYSFGILLLELASGKKP 241
++ + D + +GT ++ PE+ ++ES D++S GI L + P
Sbjct: 199 SEYMVDKKIKGS---RGTYEFMPPEFF----SNESSYNGAKVDIWSLGICLYVMFYNVVP 251
Query: 242 I 242
Sbjct: 252 F 252
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 143 IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRV 202
++I +G+ YL I+HRD+K SN+L+++ + ++ DFG + + D +
Sbjct: 109 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSF 163
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
GT Y++PE S D++S G+ L+E+A G+ PI
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASE 221
I+HRD+KA N+LLDAD ++ADFGF+ G + G Y APE GK +
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFSNEFTFG--NKLDAFCGAPPYAAPE-LFQGKKYD 190
Query: 222 S--CDVYSFGILLLELASGKKPIEKVN 246
DV+S G++L L SG P + N
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 143 IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRV 202
++I +G+ YL I+HRD+K SN+L+++ + ++ DFG + + D +
Sbjct: 109 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSF 163
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
GT Y++PE S D++S G+ L+E+A G+ PI
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 22/210 (10%)
Query: 40 FNYDNKLGEGGFGSVYWGQLWD---GSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNL 96
+ ++G G FG V+ ++ D G Q AVK++++ + E E+ A + +
Sbjct: 60 MTHQPRVGRGSFGEVH--RMKDKQTGFQCAVKKVRLEVFRVE-----ELVACAGLSSPRI 112
Query: 97 LSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
+ L G EG V +M CL +R + + EG+ YLH
Sbjct: 113 VPLYGAVREGP---WVNIFMELLEGGSLGQLIKQMGCLPE-DRALYYLGQALEGLEYLH- 167
Query: 157 HATPHIIHRDIKASNVLLDAD-FKAQVADFGFA-KLIPDG---ATHVTTRVKGTLGYLAP 211
T I+H D+KA NVLL +D +A + DFG A L PDG + + GT ++AP
Sbjct: 168 --TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP 225
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKP 241
E M D++S ++L + +G P
Sbjct: 226 EVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 13/113 (11%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHVTTRVKGTL 206
+ YLH + IIHRD+K NVLL + D ++ DFG +K++ G T + + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 180
Query: 207 GYLAPEYAM-LGKA--SESCDVYSFGILLLELASGKKPIE--KVNSAIKRTIT 254
YLAPE + +G A + + D +S G++L SG P + ++K IT
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 233
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 16/209 (7%)
Query: 39 NFNYDNKLGEGGFGSVYW-GQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLL 97
F + LG G F V+ Q G A+K +K + E+ +L +++H+N++
Sbjct: 10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIV 69
Query: 98 SLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSA-EGIVYLHH 156
+L E + Y+ E + + + I + YLH
Sbjct: 70 TL-----EDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHE 124
Query: 157 HATPHIIHRDIKASNVLL---DADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEY 213
+ I+HRD+K N+L + + K + DFG +K+ +G + + GT GY+APE
Sbjct: 125 NG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG---IMSTACGTPGYVAPEV 178
Query: 214 AMLGKASESCDVYSFGILLLELASGKKPI 242
S++ D +S G++ L G P
Sbjct: 179 LAQKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 102/227 (44%), Gaps = 41/227 (18%)
Query: 45 KLGEGGFGSVYWGQL--WDGSQIAVKRL-KVWSNKAEMEFAV-EVEILARVR-HKNLLSL 99
KLG+G +G V W + G +AVK++ + N + + E+ IL + H+N+++L
Sbjct: 16 KLGKGAYGIV-WKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNL 74
Query: 100 RGYCAEGQER--LIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+R +V+DYM +L + + + I YLH
Sbjct: 75 LNVLRADNDRDVYLVFDYMETDLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLHSG 128
Query: 158 ATPHIIHRDIKASNVLLDADFKAQVADFGFAKL----------IP----------DGATH 197
++HRD+K SN+LL+A+ +VADFG ++ IP D
Sbjct: 129 G---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 198 VTTRVKGTLGYLAPEYAMLG--KASESCDVYSFGILLLELASGKKPI 242
+ T T Y APE +LG K ++ D++S G +L E+ G KPI
Sbjct: 186 ILTDYVATRWYRAPE-ILLGSTKYTKGIDMWSLGCILGEILCG-KPI 230
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 143 IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRV 202
++I +G+ YL I+HRD+K SN+L+++ + ++ DFG + + D +
Sbjct: 109 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSF 163
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
GT Y++PE S D++S G+ L+E+A G+ PI
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 13/113 (11%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHVTTRVKGTL 206
+ YLH + IIHRD+K NVLL + D ++ DFG +K++ G T + + GT
Sbjct: 265 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 319
Query: 207 GYLAPEYAM-LGKA--SESCDVYSFGILLLELASGKKPIE--KVNSAIKRTIT 254
YLAPE + +G A + + D +S G++L SG P + ++K IT
Sbjct: 320 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 372
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 13/113 (11%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHVTTRVKGTL 206
+ YLH + IIHRD+K NVLL + D ++ DFG +K++ G T + + GT
Sbjct: 125 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 179
Query: 207 GYLAPEYAM-LGKA--SESCDVYSFGILLLELASGKKPIE--KVNSAIKRTIT 254
YLAPE + +G A + + D +S G++L SG P + ++K IT
Sbjct: 180 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 232
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASE 221
++HRD+K +NV LD ++ DFG A+++ + T V GT Y++PE +E
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNRMSYNE 195
Query: 222 SCDVYSFGILLLELASGKKPI 242
D++S G LL EL + P
Sbjct: 196 KSDIWSLGCLLYELCALMPPF 216
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 13/113 (11%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHVTTRVKGTL 206
+ YLH + IIHRD+K NVLL + D ++ DFG +K++ G T + + GT
Sbjct: 251 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 305
Query: 207 GYLAPEYAM-LGKA--SESCDVYSFGILLLELASGKKPIE--KVNSAIKRTIT 254
YLAPE + +G A + + D +S G++L SG P + ++K IT
Sbjct: 306 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 358
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 13/113 (11%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHVTTRVKGTL 206
+ YLH + IIHRD+K NVLL + D ++ DFG +K++ G T + + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 180
Query: 207 GYLAPEYAM-LGKA--SESCDVYSFGILLLELASGKKPIE--KVNSAIKRTIT 254
YLAPE + +G A + + D +S G++L SG P + ++K IT
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 233
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 19/105 (18%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHVTTRVK--- 203
GI Y H + I+HRD+K N+LL++ D ++ DFG + TH K
Sbjct: 138 GITYXHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKXKD 187
Query: 204 --GTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVN 246
GT Y+APE + G E CDV+S G++L L SG P N
Sbjct: 188 KIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGAN 231
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 13/113 (11%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHVTTRVKGTL 206
+ YLH + IIHRD+K NVLL + D ++ DFG +K++ G T + + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 180
Query: 207 GYLAPEYAM-LGKA--SESCDVYSFGILLLELASGKKPIE--KVNSAIKRTIT 254
YLAPE + +G A + + D +S G++L SG P + ++K IT
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 233
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT YLAP
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPA 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 13/113 (11%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHVTTRVKGTL 206
+ YLH + IIHRD+K NVLL + D ++ DFG +K++ G T + + GT
Sbjct: 132 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 186
Query: 207 GYLAPEYAM-LGKA--SESCDVYSFGILLLELASGKKPIE--KVNSAIKRTIT 254
YLAPE + +G A + + D +S G++L SG P + ++K IT
Sbjct: 187 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 239
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 155 HHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEY- 213
H H+ +IHRD+K SNVL++A + ++ DFG + + D T G Y+APE
Sbjct: 168 HLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK--TIDAGCKPYMAPERI 225
Query: 214 -AMLGKASESC--DVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERKFSELA 270
L + S D++S GI ++ELA + P + W P ++ E
Sbjct: 226 NPELNQKGYSVKSDIWSLGITMIELAILRFPYD-----------SWGTPFQQLKQVVEEP 274
Query: 271 DPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
P+L + E V C ++RPT E++
Sbjct: 275 SPQLPADKFSAEF---VDFTSQCLKKNSKERPTYPELM 309
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+++D +V DFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+++D +V DFGFAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYAMLGK 218
+ +HRD+ A NVLL A+++DFG +K + + + G + + APE K
Sbjct: 137 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 196
Query: 219 ASESCDVYSFGILLLE-LASGKKPIEKVN----SAIKRTITDWALPLACERKFSELAD 271
S DV+SFG+L+ E + G+KP + +A+ P C R+ +L +
Sbjct: 197 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMN 254
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 30/173 (17%)
Query: 145 IGSAEGIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHVTTR 201
IG+A I +LH H +I HRD+K N+L + D ++ DFGFAK A
Sbjct: 118 IGTA--IQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY 172
Query: 202 VKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI-----EKVNSAIKRTITDW 256
T Y+APE K +SCD++S G+++ L G P + ++ +KR I
Sbjct: 173 ---TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRI--- 226
Query: 257 ALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLD 309
+ + P + V E+ K+++ + L + P +R T+ + ++
Sbjct: 227 --------RLGQYGFPNPEWSEVSEDAKQLIRLLLK---TDPTERLTITQFMN 268
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+++D +V DFGFAK + T + GT YLAPE
Sbjct: 157 YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+++D +V DFGFAK + T + GT YLAPE
Sbjct: 157 YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+++D +V DFGFAK + T + GT YLAPE
Sbjct: 157 YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+++D +V DFGFAK + T + GT YLAPE
Sbjct: 157 YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYAMLGK 218
+ +HRD+ A NVLL A+++DFG +K + + + G + + APE K
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 186
Query: 219 ASESCDVYSFGILLLE-LASGKKPIEKVN----SAIKRTITDWALPLACERKFSELAD 271
S DV+SFG+L+ E + G+KP + +A+ P C R+ +L +
Sbjct: 187 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMN 244
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYAMLGK 218
+ +HRD+ A NVLL A+++DFG +K + + + G + + APE K
Sbjct: 145 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 204
Query: 219 ASESCDVYSFGILLLE-LASGKKPIEKVN----SAIKRTITDWALPLACERKFSELAD 271
S DV+SFG+L+ E + G+KP + +A+ P C R+ +L +
Sbjct: 205 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMN 262
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYAMLGK 218
+ +HRD+ A NVLL A+++DFG +K + + + G + + APE K
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 219 ASESCDVYSFGILLLE-LASGKKPIEKVN----SAIKRTITDWALPLACERKFSELAD 271
S DV+SFG+L+ E + G+KP + +A+ P C R+ +L +
Sbjct: 207 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMN 264
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYAMLGK 218
+ +HRD+ A NVLL A+++DFG +K + + + G + + APE K
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 219 ASESCDVYSFGILLLE-LASGKKPIEKVN----SAIKRTITDWALPLACERKFSELAD 271
S DV+SFG+L+ E + G+KP + +A+ P C R+ +L +
Sbjct: 207 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMN 264
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYAMLGK 218
+ +HRD+ A NVLL A+++DFG +K + + + G + + APE K
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 190
Query: 219 ASESCDVYSFGILLLE-LASGKKPIEKVN----SAIKRTITDWALPLACERKFSELAD 271
S DV+SFG+L+ E + G+KP + +A+ P C R+ +L +
Sbjct: 191 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMN 248
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYAMLGK 218
+ +HRD+ A NVLL A+++DFG +K + + + G + + APE K
Sbjct: 125 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 184
Query: 219 ASESCDVYSFGILLLE-LASGKKPIEKVN----SAIKRTITDWALPLACERKFSELAD 271
S DV+SFG+L+ E + G+KP + +A+ P C R+ +L +
Sbjct: 185 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMN 242
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 30/173 (17%)
Query: 145 IGSAEGIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHVTTR 201
IG+A I +LH H +I HRD+K N+L + D ++ DFGFAK A
Sbjct: 137 IGTA--IQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY 191
Query: 202 VKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI-----EKVNSAIKRTITDW 256
T Y+APE K +SCD++S G+++ L G P + ++ +KR I
Sbjct: 192 ---TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRI--- 245
Query: 257 ALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLD 309
+ + P + V E+ K+++ + L + P +R T+ + ++
Sbjct: 246 --------RLGQYGFPNPEWSEVSEDAKQLIRLLLK---TDPTERLTITQFMN 287
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLI--PDGATHVTTRVKGTLGYLAPEYAMLGK 218
+ +HRD+ A NVLL A+++DFG +K + + T K + + APE K
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYK 190
Query: 219 ASESCDVYSFGILLLE-LASGKKPIEKVN----SAIKRTITDWALPLACERKFSELAD 271
S DV+SFG+L+ E + G+KP + +A+ P C R+ +L +
Sbjct: 191 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMN 248
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 92/206 (44%), Gaps = 13/206 (6%)
Query: 39 NFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVRHKN 95
NF K+GEG +G VY + G +A+K++++ + + E+ +L + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 96 LLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
++ L + +V++++ L + +G+ + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCH 120
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAM 215
H ++HRD+K N+L++ + ++ADFG A+ T V TL Y APE +
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE-IL 175
Query: 216 LGKA--SESCDVYSFGILLLELASGK 239
LG S + D++S G + E+ + +
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 127/305 (41%), Gaps = 62/305 (20%)
Query: 39 NFNYDNKLGEGGFGSVYWGQLW------DGSQIAVKRLKVWSNKAEM-EFAVEVEILARV 91
N LGEG FG V + + +AVK LK ++ +E+ + E +L +V
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 92 RHKNLLSLRGYCAEGQERLIVYDY--------------------MPNXXXXXXXXXXXXX 131
H +++ L G C++ L++ +Y + +
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 132 ECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI 191
E L + A ++G+ YL A ++HRD+ A N+L+ K +++DFG ++ +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 192 PDGATHVTTRVKGTLG--YLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+ + V R +G + ++A E + DV+SFG+LL E+ + G P +
Sbjct: 201 YEEDSXV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP- 258
Query: 249 IKRTITDWALPLACERKFSELADPRLNGNFVE------EELKRVVLVALTCAHSKPEKRP 302
ER F+ L G+ +E EE+ R++ L C +P+KRP
Sbjct: 259 --------------ERLFNLLK----TGHRMERPDNCSEEMYRLM---LQCWKQEPDKRP 297
Query: 303 TMLEV 307
++
Sbjct: 298 VFADI 302
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 106/238 (44%), Gaps = 49/238 (20%)
Query: 33 LHSATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLKVWSNKAEMEFAV----EVEI 87
+++ +++F + LGEG +G V G +A+K+++ + FA+ E++I
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL---FALRTLREIKI 62
Query: 88 LARVRHKNLLSL----RGYCAEG-QERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD 142
L +H+N++++ R E E I+ + M + +R +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-----------------DLHRVIS 105
Query: 143 IAIGSAEGIVYLHHHAT--------PHIIHRDIKASNVLLDADFKAQVADFGFAKLI--- 191
+ S + I Y + ++IHRD+K SN+L++++ +V DFG A++I
Sbjct: 106 TQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165
Query: 192 ------PDGATHVTTRVKGTLGYLAPEYAML-GKASESCDVYSFGILLLELASGKKPI 242
P G T Y APE + K S + DV+S G +L EL ++PI
Sbjct: 166 AADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 32/232 (13%)
Query: 39 NFNYDNKLGEGGFGSVYWGQLWDGS------QIAVKRLKVWSNKAEME-FAVEVEILARV 91
N + LG G FG V + S Q+AVK LK ++ +E E E++++ ++
Sbjct: 46 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 105
Query: 92 -RHKNLLSLRGYCAEGQERLIVYDYM-----------------PNXXXXXXXXXXXXXEC 133
H+N+++L G C ++++Y + E
Sbjct: 106 GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 165
Query: 134 L--LNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAK-L 190
L L + + A A+G+ +L + +HRD+ A NVL+ ++ DFG A+ +
Sbjct: 166 LNVLTFEDLLCFAYQVAKGMEFLEFKSC---VHRDLAARNVLVTHGKVVKICDFGLARDI 222
Query: 191 IPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKP 241
+ D V + + ++APE G + DV+S+GILL E+ S G P
Sbjct: 223 MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 274
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 18/157 (11%)
Query: 155 HHHATPHIIHRDIKASNVLLDADFKAQVADFGFAK-LIPDGATHVTTRVKGTLG--YLAP 211
H H+ +IHRD+K SNVL++A + ++ DFG + L+ D A + K + + P
Sbjct: 124 HLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINP 183
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERKFSELAD 271
E G + +S D++S GI ++ELA + P + W P ++ E
Sbjct: 184 ELNQKGYSVKS-DIWSLGITMIELAILRFPYDS-----------WGTPFQQLKQVVEEPS 231
Query: 272 PRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
P+L + E V C ++RPT E++
Sbjct: 232 PQLPADKFSAEF---VDFTSQCLKKNSKERPTYPELM 265
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 20/182 (10%)
Query: 65 IAVKRL-KVWSNKAEMEFAV-EVEILARVRHKNLLSLRGYCA------EGQERLIVYDYM 116
+A+K+L + + N+ + A E+ ++ V HKN++ L E Q+ IV + M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 117 PNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA 176
+ L+ R + GI +LH + IIHRD+K SN+++ +
Sbjct: 112 -------DANLSQVIQMELDHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKS 161
Query: 177 DFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELA 236
D ++ DFG A+ G + + T T Y APE + E+ D++S G+++ E+
Sbjct: 162 DATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
Query: 237 SG 238
G
Sbjct: 220 KG 221
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 45 KLGEGGFGSVYWGQLWDGSQI-AVKR-LKVWSNKAEMEFAV-EVEILARVRHKNLLSLRG 101
K+GEG +G V+ + D QI A+K+ L+ + + A+ E+ +L +++H NL++L
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXX-XXECLLNWNRRMDIAIGSAEGIVYLHHHATP 160
+ +V++Y + E L+ I + + + + H H
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVK-----SITWQTLQAVNFCHKH--- 121
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLG--K 218
+ IHRD+K N+L+ ++ DFGFA+L+ + + V T Y +PE ++G +
Sbjct: 122 NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV-ATRWYRSPE-LLVGDTQ 179
Query: 219 ASESCDVYSFGILLLELASG 238
DV++ G + EL SG
Sbjct: 180 YGPPVDVWAIGCVFAELLSG 199
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 11/205 (5%)
Query: 39 NFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVRHKN 95
NF K+GEG +G VY + G +A+K++++ + + E+ +L + H N
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 96 LLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
++ L + +V++++ L + +G+ + H
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCH 124
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAM 215
H ++HRD+K N+L++ + ++ADFG A+ T V TL Y APE +
Sbjct: 125 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 180
Query: 216 LGK-ASESCDVYSFGILLLELASGK 239
K S + D++S G + E+ + +
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 127/305 (41%), Gaps = 62/305 (20%)
Query: 39 NFNYDNKLGEGGFGSVYWGQLW------DGSQIAVKRLKVWSNKAEM-EFAVEVEILARV 91
N LGEG FG V + + +AVK LK ++ +E+ + E +L +V
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 92 RHKNLLSLRGYCAEGQERLIVYDY--------------------MPNXXXXXXXXXXXXX 131
H +++ L G C++ L++ +Y + +
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 132 ECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI 191
E L + A ++G+ YL A ++HRD+ A N+L+ K +++DFG ++ +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 192 PDGATHVTTRVKGTLG--YLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSA 248
+ + V R +G + ++A E + DV+SFG+LL E+ + G P +
Sbjct: 201 YEEDSXV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP- 258
Query: 249 IKRTITDWALPLACERKFSELADPRLNGNFVE------EELKRVVLVALTCAHSKPEKRP 302
ER F+ L G+ +E EE+ R++ L C +P+KRP
Sbjct: 259 --------------ERLFNLLK----TGHRMERPDNCSEEMYRLM---LQCWKQEPDKRP 297
Query: 303 TMLEV 307
++
Sbjct: 298 VFADI 302
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 20/182 (10%)
Query: 65 IAVKRL-KVWSNKAEMEFAV-EVEILARVRHKNLLSLRGYCA------EGQERLIVYDYM 116
+A+K+L + + N+ + A E+ ++ V HKN++ L E Q+ IV + M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 117 PNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA 176
+ L+ R + GI +LH + IIHRD+K SN+++ +
Sbjct: 112 -------DANLSQVIQMELDHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKS 161
Query: 177 DFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELA 236
D ++ DFG A+ G + + T T Y APE + E+ D++S G+++ E+
Sbjct: 162 DATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
Query: 237 SG 238
G
Sbjct: 220 KG 221
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 17/103 (16%)
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGY 208
E + +LH + +I+HRD+K N+LLD + + +++DFGF+ + G + GT GY
Sbjct: 211 EAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK--LRELCGTPGY 265
Query: 209 LAPE---------YAMLGKASESCDVYSFGILLLELASGKKPI 242
LAPE + GK D+++ G++L L +G P
Sbjct: 266 LAPEILKCSMDETHPGYGK---EVDLWACGVILFTLLAGSPPF 305
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 86/208 (41%), Gaps = 11/208 (5%)
Query: 40 FNYDNKLGEGGFGSVYW-GQLWDGSQIAVKRLKVWSNKAEME-FAVEVEILARVRHKNLL 97
F + KLG G FG V+ + G + +K + ++ ME E+E+L + H N++
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 98 SLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHH 157
+ + IV + L+ ++ + Y H
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH-- 141
Query: 158 ATPHIIHRDIKASNVLL---DADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYA 214
+ H++H+D+K N+L ++ DFG A+L + +T GT Y+APE
Sbjct: 142 -SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF--KSDEHSTNAAGTALYMAPE-V 197
Query: 215 MLGKASESCDVYSFGILLLELASGKKPI 242
+ CD++S G+++ L +G P
Sbjct: 198 FKRDVTFKCDIWSAGVVMYFLLTGCLPF 225
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+++D QV DFG AK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 11/205 (5%)
Query: 39 NFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVRHKN 95
NF K+GEG +G VY + G +A+K++++ + + E+ +L + H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 96 LLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
++ L + +V++++ L + +G+ + H
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCH 127
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAM 215
H ++HRD+K N+L++ + ++ADFG A+ T V TL Y APE +
Sbjct: 128 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 183
Query: 216 LGK-ASESCDVYSFGILLLELASGK 239
K S + D++S G + E+ + +
Sbjct: 184 GXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 29/212 (13%)
Query: 46 LGEGGFGSVYWGQLW------DGSQIAVKRLKVWSNKAE-MEFAVEVEILARVRH-KNLL 97
LGE G G+ GQ+W G IAVK+++ NK E ++++++ + ++
Sbjct: 30 LGEMGSGTC--GQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIV 87
Query: 98 SLRGYCAEGQERLIVYDYMPN-XXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
G + I + M E +L +M +AI A L++
Sbjct: 88 QCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILG---KMTVAIVKA-----LYY 139
Query: 157 HATPH-IIHRDIKASNVLLDADFKAQVADFGFA-KLIPDGATHVTTRVKGTLGYLAPEYA 214
H +IHRD+K SN+LLD + ++ DFG + +L+ D A R G Y+APE
Sbjct: 140 LKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKD---RSAGCAAYMAPERI 196
Query: 215 MLGKASES-----CDVYSFGILLLELASGKKP 241
++ DV+S GI L+ELA+G+ P
Sbjct: 197 DPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYAMLGK 218
+ +HRD+ A NVLL A+++DFG +K + + + G + + APE K
Sbjct: 490 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 549
Query: 219 ASESCDVYSFGILLLE-LASGKKPIEKVN----SAIKRTITDWALPLACERKFSELAD 271
S DV+SFG+L+ E + G+KP + +A+ P C R+ +L +
Sbjct: 550 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMN 607
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 11/205 (5%)
Query: 39 NFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVRHKN 95
NF K+GEG +G VY + G +A+K++++ + + E+ +L + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 96 LLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
++ L + +V++++ L + +G+ + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCH 119
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAM 215
H ++HRD+K N+L++ + ++ADFG A+ T V TL Y APE +
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 175
Query: 216 LGK-ASESCDVYSFGILLLELASGK 239
K S + D++S G + E+ + +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 161 HIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG--TLGYLAPEYAMLGK 218
+ +HRD+ A NVLL A+++DFG +K + + + G + + APE K
Sbjct: 489 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 548
Query: 219 ASESCDVYSFGILLLE-LASGKKPIEKVN----SAIKRTITDWALPLACERKFSELAD 271
S DV+SFG+L+ E + G+KP + +A+ P C R+ +L +
Sbjct: 549 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMN 606
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 11/205 (5%)
Query: 39 NFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVRHKN 95
NF K+GEG +G VY + G +A+K++++ + + E+ +L + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 96 LLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
++ L + +V++++ L + +G+ + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCH 120
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAM 215
H ++HRD+K N+L++ + ++ADFG A+ T V TL Y APE +
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 176
Query: 216 LGK-ASESCDVYSFGILLLELASGK 239
K S + D++S G + E+ + +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 11/205 (5%)
Query: 39 NFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVRHKN 95
NF K+GEG +G VY + G +A+K++++ + + E+ +L + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 96 LLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
++ L + +V++++ L + +G+ + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCH 119
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAM 215
H ++HRD+K N+L++ + ++ADFG A+ T V TL Y APE +
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 175
Query: 216 LGK-ASESCDVYSFGILLLELASGK 239
K S + D++S G + E+ + +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 11/208 (5%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVR 92
+ NF K+GEG +G VY + G +A+K++++ + + E+ +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 93 HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIV 152
H N++ L + +V++++ L + +G+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLA 118
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
+ H H ++HRD+K N+L++ + ++ADFG A+ T V TL Y APE
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 174
Query: 213 YAMLGK-ASESCDVYSFGILLLELASGK 239
+ K S + D++S G + E+ + +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 11/205 (5%)
Query: 39 NFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVRHKN 95
NF K+GEG +G VY + G +A+K++++ + + E+ +L + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 96 LLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
++ L + +V++++ L + +G+ + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCH 120
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAM 215
H ++HRD+K N+L++ + ++ADFG A+ T V TL Y APE +
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 176
Query: 216 LGK-ASESCDVYSFGILLLELASGK 239
K S + D++S G + E+ + +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 24/168 (14%)
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI---PDGATHVTTRVKG 204
A G+ +L ++ IHRD+ A N+LL + ++ DFG A+ I PD TR+
Sbjct: 209 ARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL-- 263
Query: 205 TLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRTITDWALPLACE 263
L ++APE S DV+S+G+LL E+ S G P V +
Sbjct: 264 PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQ---------------MD 308
Query: 264 RKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
F + E + + L C H P++RP E+++ L
Sbjct: 309 EDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 11/205 (5%)
Query: 39 NFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVRHKN 95
NF K+GEG +G VY + G +A+K++++ + + E+ +L + H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 96 LLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
++ L + +V++++ L + +G+ + H
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCH 127
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAM 215
H ++HRD+K N+L++ + ++ADFG A+ T V TL Y APE +
Sbjct: 128 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 183
Query: 216 LGK-ASESCDVYSFGILLLELASGK 239
K S + D++S G + E+ + +
Sbjct: 184 GCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 143 IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRV 202
++I +G+ YL I+HRD+K SN+L+++ + ++ DFG + + D +
Sbjct: 112 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---EMANEF 166
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKP 241
GT Y++PE S D++S G+ L+E+A G+ P
Sbjct: 167 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+L+D QV DFGFAK + T + GT LAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEALAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 106/228 (46%), Gaps = 27/228 (11%)
Query: 45 KLGEGGFGSVYWGQLWDGSQI-AVKRLKVWSNKAEMEFAV--EVEILARVRHKNLLSLRG 101
K+GEG +G+V+ + + +I A+KR+++ + + + E+ +L ++HKN++ L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSA------EGIVYLH 155
++ +V+++ + N +D I + +G+ + H
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYFD----------SCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAM 215
+++HRD+K N+L++ + + ++ADFG A+ + V TL Y P+
Sbjct: 119 SR---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLF 174
Query: 216 LGKA-SESCDVYSFGILLLELASGKKPI---EKVNSAIKRTITDWALP 259
K S S D++S G + ELA+ +P+ V+ +KR P
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTP 222
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 46 LGEGGFGSVYWGQLWDGSQIAVKRL---KVWSNKAEMEFAVEVEILARVRHKNLLSLRGY 102
+G G FG V+ +L + ++A+K++ K + N+ E++I+ V+H N++ L+ +
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR-------ELQIMRIVKHPNVVDLKAF 100
Query: 103 CAEGQERL------IVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
++ +V +Y+P + + ++ + + Y+H
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMY-QLLRSLAYIHS 159
Query: 157 HATPHIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAM 215
I HRDIK N+LLD ++ DFG AK++ G +V+ + Y APE +
Sbjct: 160 IG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC--SRYYRAPEL-I 213
Query: 216 LGKA--SESCDVYSFGILLLELASGK 239
G + + D++S G ++ EL G+
Sbjct: 214 FGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 20/183 (10%)
Query: 65 IAVKRL-KVWSNKAEMEFAV-EVEILARVRHKNLLSL------RGYCAEGQERLIVYDYM 116
+A+K+L + + N+ + A E+ ++ V HKN++SL + E Q+ +V + M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 117 PNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA 176
+ L+ R + GI +LH + IIHRD+K SN+++ +
Sbjct: 112 -------DANLXQVIQMELDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKS 161
Query: 177 DFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELA 236
D ++ DFG A+ G + + T T Y APE + E+ D++S G ++ E+
Sbjct: 162 DXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
Query: 237 SGK 239
K
Sbjct: 220 RHK 222
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 25/219 (11%)
Query: 45 KLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVRHKNLLSLRG 101
K+G+G FG V+ + G ++A+K++ + + K E++IL ++H+N+++L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 102 YC---AEGQER-----LIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
C A R +V+D+ + L R M + + G+ Y
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKF-TLSEIKRVMQMLLN---GLYY 140
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---TLGYLA 210
+H + I+HRD+KA+NVL+ D ++ADFG A+ R TL Y
Sbjct: 141 IHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 211 PEYAMLGKA--SESCDVYSFGILLLELASGKKPIEKVNS 247
PE +LG+ D++ G ++ E+ + + PI + N+
Sbjct: 198 PEL-LLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNT 234
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 11/205 (5%)
Query: 39 NFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVRHKN 95
NF K+GEG +G VY + G +A+K++++ + + E+ +L + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 96 LLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
++ L + +V++++ L + +G+ + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLSFCH 120
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAM 215
H ++HRD+K N+L++ + ++ADFG A+ T V TL Y APE +
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 176
Query: 216 LGK-ASESCDVYSFGILLLELASGK 239
K S + D++S G + E+ + +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 28/170 (16%)
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI---PDGATHVTTRVKG 204
A+G+ +L A+ IHRD+ A N+LL ++ DFG A+ I PD R+
Sbjct: 210 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-- 264
Query: 205 TLGYLAPEYAMLGKASESCDVYSFGILLLE---LASGKKPIEKVNSAIKRTITDWALPLA 261
L ++APE + DV+SFG+LL E L + P K++ R +
Sbjct: 265 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-------- 316
Query: 262 CERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
++ + + P ++ E+ + + L C H +P +RPT E+++ L
Sbjct: 317 --KEGTRMRAP----DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 357
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 114/279 (40%), Gaps = 30/279 (10%)
Query: 75 NKAEMEFAVEVEILARV-RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXEC 133
+K++ + + E+EIL R +H N+++L+ +G+ +V + M
Sbjct: 61 DKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFS- 119
Query: 134 LLNWNRRMDIAIGS-AEGIVYLHHHATPHIIHRDIKASNVL-LDADFKAQ---VADFGFA 188
R + + + + YLH ++HRD+K SN+L +D + + DFGFA
Sbjct: 120 ----EREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFA 172
Query: 189 KLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSA 248
K + + T T ++APE E CD++S GILL + +G P S
Sbjct: 173 KQLRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSD 231
Query: 249 IKRTITDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
I L KF+ N N V E K +V L H P +R T +VL
Sbjct: 232 TPEEI----LTRIGSGKFTLSGG---NWNTVSETAKDLVSKML---HVDPHQRLTAKQVL 281
Query: 309 DLLKGESKEKLTELENDELFKSHQVADYNDGKAVAEDSA 347
K+KL + + SHQ G A SA
Sbjct: 282 QHPWVTQKDKLPQSQ-----LSHQDLQLVKGAMAATYSA 315
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 28/170 (16%)
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI---PDGATHVTTRVKG 204
A+G+ +L A+ IHRD+ A N+LL ++ DFG A+ I PD R+
Sbjct: 201 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-- 255
Query: 205 TLGYLAPEYAMLGKASESCDVYSFGILLLE---LASGKKPIEKVNSAIKRTITDWALPLA 261
L ++APE + DV+SFG+LL E L + P K++ R +
Sbjct: 256 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-------- 307
Query: 262 CERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
++ + + P ++ E+ + + L C H +P +RPT E+++ L
Sbjct: 308 --KEGTRMRAP----DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 348
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 28/170 (16%)
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI---PDGATHVTTRVKG 204
A+G+ +L A+ IHRD+ A N+LL ++ DFG A+ I PD R+
Sbjct: 208 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-- 262
Query: 205 TLGYLAPEYAMLGKASESCDVYSFGILLLE---LASGKKPIEKVNSAIKRTITDWALPLA 261
L ++APE + DV+SFG+LL E L + P K++ R +
Sbjct: 263 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-------- 314
Query: 262 CERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
++ + + P ++ E+ + + L C H +P +RPT E+++ L
Sbjct: 315 --KEGTRMRAP----DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 355
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASE 221
++HRD+K +NV LD ++ DFG A+++ + V GT Y++PE +E
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFV-GTPYYMSPEQMNRMSYNE 195
Query: 222 SCDVYSFGILLLELASGKKPI 242
D++S G LL EL + P
Sbjct: 196 KSDIWSLGCLLYELCALMPPF 216
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 147 SAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFA-KLIPDGATHVTTRVKGT 205
+AE ++ L + +IHRD+K N+LLD ++ADFG K+ G H T V GT
Sbjct: 180 TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GT 238
Query: 206 LGYLAPEYAML----GKASESCDVYSFGILLLELASGKKPI 242
Y++PE G CD +S G+ L E+ G P
Sbjct: 239 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 103/250 (41%), Gaps = 34/250 (13%)
Query: 19 GKKQPTWRIFSLKELHSATNNFNYDNK-LGEGGFGSVYWGQLWDGSQIAVKRLKV-WSNK 76
GKK RI ++ + N K LG G G+V + + G +AVKR+ + + +
Sbjct: 13 GKKGRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDI 72
Query: 77 AEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDY-MPNXXXXXXXXXXXXXECLL 135
A ME + E H N++ R YC+E +R + + N + L
Sbjct: 73 ALMEIKLLTE---SDDHPNVI--RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENL 127
Query: 136 NWNRR---MDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA-------------DFK 179
+ + + A G+ +LH + IIHRD+K N+L+ + +
Sbjct: 128 KLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLR 184
Query: 180 AQVADFGFAKLIPDGATHVTTRVK---GTLGYLAPEY---AMLGKASESCDVYSFG-ILL 232
++DFG K + G + GT G+ APE + + + S D++S G +
Sbjct: 185 ILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY 244
Query: 233 LELASGKKPI 242
L+ GK P
Sbjct: 245 YILSKGKHPF 254
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 40 FNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKV--WSNKAEMEFAVEVEILARVRHKNLL 97
N+ KL E G ++ G+ W G+ I VK LKV WS + +F E L H N+L
Sbjct: 12 LNFLTKLNENHSGELWKGR-WQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVL 70
Query: 98 SLRGYC--AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
+ G C ++ + P +++ ++ + A+ A G +L
Sbjct: 71 PVLGACQSPPAPHPTLITHWXP--YGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFL- 127
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQV--ADFGFAKLIPDGATHVTTRVKGTLGYLAPEY 213
H P I + + +V +D D A++ AD F+ P G + ++APE
Sbjct: 128 HTLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSP-GRXYAP-------AWVAPE- 178
Query: 214 AMLGKASE----SCDVYSFGILLLELASGKKPI 242
A+ K + S D +SF +LL EL + + P
Sbjct: 179 ALQKKPEDTNRRSADXWSFAVLLWELVTREVPF 211
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 104/250 (41%), Gaps = 34/250 (13%)
Query: 19 GKKQPTWRIFSLKELHSATNNFNYDNK-LGEGGFGSVYWGQLWDGSQIAVKRLKV-WSNK 76
GKK RI ++ + N K LG G G+V + + G +AVKR+ + + +
Sbjct: 13 GKKGRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDI 72
Query: 77 AEMEFAVEVEILARVRHKNLLSLRGYCAEGQER-LIVYDYMPNXXXXXXXXXXXXXECLL 135
A ME + E H N++ R YC+E +R L + + N + L
Sbjct: 73 ALMEIKLLTE---SDDHPNVI--RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENL 127
Query: 136 NWNRR---MDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA-------------DFK 179
+ + + A G+ +LH + IIHRD+K N+L+ + +
Sbjct: 128 KLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLR 184
Query: 180 AQVADFGFAKLIPDGATHVTTRVK---GTLGYLAPEY---AMLGKASESCDVYSFG-ILL 232
++DFG K + G + GT G+ APE + + + S D++S G +
Sbjct: 185 ILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY 244
Query: 233 LELASGKKPI 242
L+ GK P
Sbjct: 245 YILSKGKHPF 254
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 86/206 (41%), Gaps = 14/206 (6%)
Query: 46 LGEGGFGSVYWG-QLWDGSQIAVKRLKVWSNKAEM-EFAVEVEILARVRHKNLLSLRGYC 103
+G GGF V + G +A+K + + +++ E+E L +RH+++ L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
+ +V +Y P L+ + + Y+H H
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDR----LSEEETRVVFRQIVSAVAYVHSQGYAH-- 131
Query: 164 HRDIKASNVLLDADFKAQVADFGF-AKLIPDGATHVTTRVKGTLGYLAPEYAMLGKA--S 220
RD+K N+L D K ++ DFG AK + H+ T G+L Y APE + GK+
Sbjct: 132 -RDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCGSLAYAAPE-LIQGKSYLG 188
Query: 221 ESCDVYSFGILLLELASGKKPIEKVN 246
DV+S GILL L G P + N
Sbjct: 189 SEADVWSMGILLYVLMCGFLPFDDDN 214
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 28/170 (16%)
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI---PDGATHVTTRVKG 204
A+G+ +L A+ IHRD+ A N+LL ++ DFG A+ I PD R+
Sbjct: 203 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-- 257
Query: 205 TLGYLAPEYAMLGKASESCDVYSFGILLLE---LASGKKPIEKVNSAIKRTITDWALPLA 261
L ++APE + DV+SFG+LL E L + P K++ R +
Sbjct: 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-------- 309
Query: 262 CERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVLDLL 311
++ + + P ++ E+ + + L C H +P +RPT E+++ L
Sbjct: 310 --KEGTRMRAP----DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 350
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 20/223 (8%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVR 92
AT+ + ++G G +G+VY + G +A+K ++V + + + + EV +L R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 93 ---HKNLLSLRGYCAEGQ-----ERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIA 144
H N++ L CA + + +V++++ L D+
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG---LPAETIKDLM 118
Query: 145 IGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG 204
G+ +LH + I+HRD+K N+L+ + ++ADFG A++ V
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALAPVVV 173
Query: 205 TLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNS 247
TL Y APE + + D++S G + E+ +KP+ NS
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNS 215
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 63/145 (43%), Gaps = 27/145 (18%)
Query: 141 MDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKL---------- 190
+ I I AE + +LH ++HRD+K SN+ D +V DFG
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 191 ---IPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELA-SGKKPIEKVN 246
+P ATH GT Y++PE S D++S G++L EL S +E+V
Sbjct: 224 LTPMPAYATHXGQ--VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV- 280
Query: 247 SAIKRTITD---WALPLACERKFSE 268
R ITD PL +K+ +
Sbjct: 281 ----RIITDVRNLKFPLLFTQKYPQ 301
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 11/205 (5%)
Query: 39 NFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVRHKN 95
NF K+GEG +G VY + G +A+K++++ + + E+ +L + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 96 LLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
++ L + +V++++ L + +G+ + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYL---FQLLQGLAFCH 119
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAM 215
H ++HRD+K N+L++ + ++ADFG A+ T V TL Y APE +
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 175
Query: 216 LGK-ASESCDVYSFGILLLELASGK 239
K S + D++S G + E+ + +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVR 92
+ NF K+GEG +G VY + G +A+K++++ + + E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 93 HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIV 152
H N++ L + +V++++ L + +G+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLA 117
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG----TLGY 208
+ H H ++HRD+K N+L++ + ++ADFG A+ A V R TL Y
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEVVTLWY 169
Query: 209 LAPEYAMLGK-ASESCDVYSFGILLLELASGK 239
APE + K S + D++S G + E+ + +
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVR 92
+ NF K+GEG +G VY + G +A+K++++ + + E+ +L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 93 HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIV 152
H N++ L + +V++++ L + +G+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLA 119
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG----TLGY 208
+ H H ++HRD+K N+L++ + ++ADFG A+ A V R TL Y
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEVVTLWY 171
Query: 209 LAPEYAMLGK-ASESCDVYSFGILLLELASGK 239
APE + K S + D++S G + E+ + +
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVR 92
+ NF K+GEG +G VY + G +A+K++++ + + E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 93 HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIV 152
H N++ L + +V++++ L + +G+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLA 117
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG----TLGY 208
+ H H ++HRD+K N+L++ + ++ADFG A+ A V R TL Y
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEVVTLWY 169
Query: 209 LAPEYAMLGK-ASESCDVYSFGILLLELASGK 239
APE + K S + D++S G + E+ + +
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVR 92
+ NF K+GEG +G VY + G +A+K++++ + + E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 93 HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIV 152
H N++ L + +V++++ L + +G+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLA 120
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG----TLGY 208
+ H H ++HRD+K N+L++ + ++ADFG A+ A V R TL Y
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEVVTLWY 172
Query: 209 LAPEYAMLGK-ASESCDVYSFGILLLELASGK 239
APE + K S + D++S G + E+ + +
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVR 92
+ NF K+GEG +G VY + G +A+K++++ + + E+ +L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 93 HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIV 152
H N++ L + +V++++ L + +G+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLA 119
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG----TLGY 208
+ H H ++HRD+K N+L++ + ++ADFG A+ A V R TL Y
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEVVTLWY 171
Query: 209 LAPEYAMLGK-ASESCDVYSFGILLLELASGK 239
APE + K S + D++S G + E+ + +
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVR 92
+ NF K+GEG +G VY + G +A+K++++ + + E+ +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 93 HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIV 152
H N++ L + +V++++ L + +G+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLA 118
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG----TLGY 208
+ H H ++HRD+K N+L++ + ++ADFG A+ A V R TL Y
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEVVTLWY 170
Query: 209 LAPEYAMLGK-ASESCDVYSFGILLLELASGK 239
APE + K S + D++S G + E+ + +
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVR 92
+ NF K+GEG +G VY + G +A+K++++ + + E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 93 HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIV 152
H N++ L + +V++++ L + +G+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLA 117
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG----TLGY 208
+ H H ++HRD+K N+L++ + ++ADFG A+ A V R TL Y
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEVVTLWY 169
Query: 209 LAPEYAMLGK-ASESCDVYSFGILLLELASGK 239
APE + K S + D++S G + E+ + +
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVR 92
+ NF K+GEG +G VY + G +A+K++++ + + E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 93 HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIV 152
H N++ L + +V++++ L + +G+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYL---FQLLQGLA 120
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG----TLGY 208
+ H H ++HRD+K N+L++ + ++ADFG A+ A V R TL Y
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEVVTLWY 172
Query: 209 LAPEYAMLGK-ASESCDVYSFGILLLELASGK 239
APE + K S + D++S G + E+ + +
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 25/219 (11%)
Query: 45 KLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVRHKNLLSLRG 101
K+G+G FG V+ + G ++A+K++ + + K E++IL ++H+N+++L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 102 YC---AEGQER-----LIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
C A R +V+D+ + L R M + + G+ Y
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFT-LSEIKRVMQMLLN---GLYY 140
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---TLGYLA 210
+H + I+HRD+KA+NVL+ D ++ADFG A+ R TL Y
Sbjct: 141 IHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 211 PEYAMLGKA--SESCDVYSFGILLLELASGKKPIEKVNS 247
PE +LG+ D++ G ++ E+ + + PI + N+
Sbjct: 198 PEL-LLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNT 234
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVR 92
+ NF K+GEG +G VY + G +A+K++++ + + E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 93 HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIV 152
H N++ L + +V++++ L + +G+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLA 120
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG----TLGY 208
+ H H ++HRD+K N+L++ + ++ADFG A+ A V R TL Y
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEVVTLWY 172
Query: 209 LAPEYAMLGK-ASESCDVYSFGILLLELASGK 239
APE + K S + D++S G + E+ + +
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVR 92
+ NF K+GEG +G VY + G +A+K++++ + + E+ +L +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 93 HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIV 152
H N++ L + +V++++ L + +G+
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLA 121
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG----TLGY 208
+ H H ++HRD+K N+L++ + ++ADFG A+ A V R TL Y
Sbjct: 122 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEVVTLWY 173
Query: 209 LAPEYAMLGK-ASESCDVYSFGILLLELASGK 239
APE + K S + D++S G + E+ + +
Sbjct: 174 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 92/209 (44%), Gaps = 19/209 (9%)
Query: 39 NFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVRHKN 95
NF K+GEG +G VY + G +A+K++++ + + E+ +L + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 96 LLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
++ L + +V++++ L + +G+ + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCH 119
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG----TLGYLAP 211
H ++HRD+K N+L++ + ++ADFG A+ A V R TL Y AP
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEVVTLWYRAP 171
Query: 212 EYAMLGK-ASESCDVYSFGILLLELASGK 239
E + K S + D++S G + E+ + +
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 25/219 (11%)
Query: 45 KLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVRHKNLLSLRG 101
K+G+G FG V+ + G ++A+K++ + + K E++IL ++H+N+++L
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 102 YC---AEGQER-----LIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
C A R +V+D+ + L R M + + G+ Y
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKF-TLSEIKRVMQMLLN---GLYY 139
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---TLGYLA 210
+H + I+HRD+KA+NVL+ D ++ADFG A+ R TL Y
Sbjct: 140 IHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 196
Query: 211 PEYAMLGKA--SESCDVYSFGILLLELASGKKPIEKVNS 247
PE +LG+ D++ G ++ E+ + + PI + N+
Sbjct: 197 PE-LLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNT 233
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVR 92
+ NF K+GEG +G VY + G +A+K++++ + + E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 93 HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIV 152
H N++ L + +V++++ L + +G+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLA 117
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG----TLGY 208
+ H H ++HRD+K N+L++ + ++ADFG A+ A V R TL Y
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEVVTLWY 169
Query: 209 LAPEYAMLGK-ASESCDVYSFGILLLELASGK 239
APE + K S + D++S G + E+ + +
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVR 92
+ NF K+GEG +G VY + G +A+K++++ + + E+ +L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 93 HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIV 152
H N++ L + +V++++ L + +G+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLA 119
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG----TLGY 208
+ H H ++HRD+K N+L++ + ++ADFG A+ A V R TL Y
Sbjct: 120 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEVVTLWY 171
Query: 209 LAPEYAMLGK-ASESCDVYSFGILLLELASGK 239
APE + K S + D++S G + E+ + +
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 31/163 (19%)
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFK---AQVADFGFAKLIPDGATHVTTRVKGT 205
EG+ YLH + +I+H D+K N+LL + + ++ DFG ++ I G + GT
Sbjct: 142 EGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI--GHACELREIMGT 196
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI-----EKVNSAIKRTITDWALPL 260
YLAPE + + D+++ GI+ L + P ++ I + D++
Sbjct: 197 PEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYS--- 253
Query: 261 ACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPT 303
E FS ++ +L +F++ L + PEKRPT
Sbjct: 254 --EETFSSVS--QLATDFIQSLLVK-----------NPEKRPT 281
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 25/219 (11%)
Query: 45 KLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVRHKNLLSLRG 101
K+G+G FG V+ + G ++A+K++ + + K E++IL ++H+N+++L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 102 YC---AEGQER-----LIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
C A R +V+D+ + L R M + + G+ Y
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFT-LSEIKRVMQMLLN---GLYY 140
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---TLGYLA 210
+H + I+HRD+KA+NVL+ D ++ADFG A+ R TL Y
Sbjct: 141 IHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 211 PEYAMLGKA--SESCDVYSFGILLLELASGKKPIEKVNS 247
PE +LG+ D++ G ++ E+ + + PI + N+
Sbjct: 198 PEL-LLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNT 234
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 92/209 (44%), Gaps = 19/209 (9%)
Query: 39 NFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVRHKN 95
NF K+GEG +G VY + G +A+K++++ + + E+ +L + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 96 LLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
++ L + +V++++ L + +G+ + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCH 119
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG----TLGYLAP 211
H ++HRD+K N+L++ + ++ADFG A+ A V R TL Y AP
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEVVTLWYRAP 171
Query: 212 EYAMLGK-ASESCDVYSFGILLLELASGK 239
E + K S + D++S G + E+ + +
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 20/223 (8%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVR 92
AT+ + ++G G +G+VY + G +A+K ++V + + + + EV +L R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 93 ---HKNLLSLRGYCAEGQ-----ERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIA 144
H N++ L CA + + +V++++ L D+
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG---LPAETIKDLM 118
Query: 145 IGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG 204
G+ +LH + I+HRD+K N+L+ + ++ADFG A++ V
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALDPVVV 173
Query: 205 TLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNS 247
TL Y APE + + D++S G + E+ +KP+ NS
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNS 215
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 20/183 (10%)
Query: 65 IAVKRL-KVWSNKAEMEFAV-EVEILARVRHKNLLSL------RGYCAEGQERLIVYDYM 116
+A+K+L + + N+ + A E+ ++ V HKN++SL + E Q+ +V + M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 117 PNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA 176
+ L+ R + GI +LH + IIHRD+K SN+++ +
Sbjct: 112 -------DANLXQVIQMELDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKS 161
Query: 177 DFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELA 236
D ++ DFG A+ G + + T T Y APE + E+ D++S G ++ E+
Sbjct: 162 DXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
Query: 237 SGK 239
K
Sbjct: 220 RHK 222
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVR 92
+ NF K+GEG +G VY + G +A+K++++ + + E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 93 HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIV 152
H N++ L + +V++++ L + +G+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYL---FQLLQGLA 120
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG----TLGY 208
+ H H ++HRD+K N+L++ + ++ADFG A+ A V R TL Y
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEVVTLWY 172
Query: 209 LAPEYAMLGK-ASESCDVYSFGILLLELASGK 239
APE + K S + D++S G + E+ + +
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 114/279 (40%), Gaps = 30/279 (10%)
Query: 75 NKAEMEFAVEVEILARV-RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXEC 133
+K++ + + E+EIL R +H N+++L+ +G+ +V + M
Sbjct: 61 DKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFS- 119
Query: 134 LLNWNRRMDIAIGS-AEGIVYLHHHATPHIIHRDIKASNVL-LDADFKAQ---VADFGFA 188
R + + + + YLH ++HRD+K SN+L +D + + DFGFA
Sbjct: 120 ----EREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFA 172
Query: 189 KLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSA 248
K + + T T ++APE E CD++S GILL + +G P S
Sbjct: 173 KQLRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSD 231
Query: 249 IKRTITDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
I L KF+ N N V E K +V L H P +R T +VL
Sbjct: 232 TPEEI----LTRIGSGKFTLSGG---NWNTVSETAKDLVSKML---HVDPHQRLTAKQVL 281
Query: 309 DLLKGESKEKLTELENDELFKSHQVADYNDGKAVAEDSA 347
K+KL + + SHQ G A SA
Sbjct: 282 QHPWVTQKDKLPQSQ-----LSHQDLQLVKGAMAATYSA 315
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVR 92
+ NF K+GEG +G VY + G +A+K++++ + + E+ +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 93 HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIV 152
H N++ L + +V++++ L + +G+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLA 118
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG----TLGY 208
+ H H ++HRD+K N+L++ + ++ADFG A+ A V R TL Y
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEVVTLWY 170
Query: 209 LAPEYAMLGK-ASESCDVYSFGILLLELASGK 239
APE + K S + D++S G + E+ + +
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVR 92
+ NF K+GEG +G VY + G +A+K++++ + + E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 93 HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIV 152
H N++ L + +V++++ L + +G+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYL---FQLLQGLA 120
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG----TLGY 208
+ H H ++HRD+K N+L++ + ++ADFG A+ A V R TL Y
Sbjct: 121 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEVVTLWY 172
Query: 209 LAPEYAMLGK-ASESCDVYSFGILLLELASGK 239
APE + K S + D++S G + E+ + +
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 20/182 (10%)
Query: 65 IAVKRL-KVWSNKAEMEFAV-EVEILARVRHKNLLSLRGYCA------EGQERLIVYDYM 116
+A+K+L + + N+ + A E+ ++ V HKN++ L E Q+ IV + M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 117 PNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA 176
+ L+ R + GI +LH + IIHRD+K SN+++ +
Sbjct: 112 -------DANLSQVIQMELDHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKS 161
Query: 177 DFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELA 236
D ++ DFG A+ G + + T T Y APE + E+ D++S G ++ E+
Sbjct: 162 DATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
Query: 237 SG 238
G
Sbjct: 220 KG 221
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVR 92
+ NF K+GEG +G VY + G +A+K++++ + + E+ +L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 93 HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIV 152
H N++ L + +V++++ L + +G+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYL---FQLLQGLA 119
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG----TLGY 208
+ H H ++HRD+K N+L++ + ++ADFG A+ A V R TL Y
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEVVTLWY 171
Query: 209 LAPEYAMLGK-ASESCDVYSFGILLLELASGK 239
APE + K S + D++S G + E+ + +
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVR 92
+ NF K+GEG +G VY + G +A+K++++ + + E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 93 HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIV 152
H N++ L + +V++++ L + +G+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYL---FQLLQGLA 117
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG----TLGY 208
+ H H ++HRD+K N+L++ + ++ADFG A+ A V R TL Y
Sbjct: 118 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEVVTLWY 169
Query: 209 LAPEYAMLGK-ASESCDVYSFGILLLELASGK 239
APE + K S + D++S G + E+ + +
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVR 92
+ NF K+GEG +G VY + G +A+K++++ + + E+ +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 93 HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIV 152
H N++ L + +V++++ L + +G+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYL---FQLLQGLA 118
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG----TLGY 208
+ H H ++HRD+K N+L++ + ++ADFG A+ A V R TL Y
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEVVTLWY 170
Query: 209 LAPEYAMLGK-ASESCDVYSFGILLLELASGK 239
APE + K S + D++S G + E+ + +
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 92/209 (44%), Gaps = 19/209 (9%)
Query: 39 NFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVRHKN 95
NF K+GEG +G VY + G +A+K++++ + + E+ +L + H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 96 LLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
++ L + +V++++ L + +G+ + H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCH 121
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG----TLGYLAP 211
H ++HRD+K N+L++ + ++ADFG A+ A V R TL Y AP
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEVVTLWYRAP 173
Query: 212 EYAMLGK-ASESCDVYSFGILLLELASGK 239
E + K S + D++S G + E+ + +
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 16/166 (9%)
Query: 84 EVEILARVR-HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD 142
EV+IL +V H N++ L+ +V+D M + L+
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLM----KKGELFDYLTEKVTLSEKETRK 115
Query: 143 IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRV 202
I E I LH +I+HRD+K N+LLD D ++ DFGF+ + G V
Sbjct: 116 IMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREV 170
Query: 203 KGTLGYLAPEYAMLGK------ASESCDVYSFGILLLELASGKKPI 242
GT YLAPE + D++S G+++ L +G P
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 20/183 (10%)
Query: 65 IAVKRL-KVWSNKAEMEFAV-EVEILARVRHKNLLSL------RGYCAEGQERLIVYDYM 116
+A+K+L + + N+ + A E+ ++ V HKN++SL + E Q+ +V + M
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 104
Query: 117 PNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA 176
+ L+ R + GI +LH IIHRD+K SN+++ +
Sbjct: 105 -------DANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKS 154
Query: 177 DFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELA 236
D ++ DFG A+ G + + T T Y APE + E+ D++S G ++ E+
Sbjct: 155 DXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
Query: 237 SGK 239
K
Sbjct: 213 RHK 215
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
YLH + +I+RD+K N+++D +V DFG AK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR----TWXLCGTPEYLAPE 208
Query: 213 YAMLGKASESCDVYSFGILLLELASGKKPI 242
+ +++ D ++ G+L+ E+A+G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 20/223 (8%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVR 92
AT+ + ++G G +G+VY + G +A+K ++V + + + + EV +L R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 93 ---HKNLLSLRGYCAEGQ-----ERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIA 144
H N++ L CA + + +V++++ L D+
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG---LPAETIKDLM 118
Query: 145 IGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG 204
G+ +LH + I+HRD+K N+L+ + ++ADFG A++ V
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALFPVVV 173
Query: 205 TLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNS 247
TL Y APE + + D++S G + E+ +KP+ NS
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNS 215
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 16/166 (9%)
Query: 84 EVEILARVR-HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD 142
EV+IL +V H N++ L+ +V+D M + L+
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLM----KKGELFDYLTEKVTLSEKETRK 128
Query: 143 IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRV 202
I E I LH +I+HRD+K N+LLD D ++ DFGF+ + G V
Sbjct: 129 IMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREV 183
Query: 203 KGTLGYLAPEYAMLGK------ASESCDVYSFGILLLELASGKKPI 242
GT YLAPE + D++S G+++ L +G P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 20/183 (10%)
Query: 65 IAVKRL-KVWSNKAEMEFAV-EVEILARVRHKNLLSL------RGYCAEGQERLIVYDYM 116
+A+K+L + + N+ + A E+ ++ V HKN++SL + E Q+ +V + M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 117 PNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA 176
+ L+ R + GI +LH + IIHRD+K SN+++ +
Sbjct: 112 -------DANLXQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKS 161
Query: 177 DFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELA 236
D ++ DFG A+ G + + T T Y APE + E+ D++S G ++ E+
Sbjct: 162 DXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
Query: 237 SGK 239
K
Sbjct: 220 RHK 222
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 101/233 (43%), Gaps = 39/233 (16%)
Query: 38 NNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNL 96
+ F + G+G FG+V G + G +A+K++ E + ++ LA + H N+
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQI-MQDLAVLHHPNI 81
Query: 97 LSLRGYCAEGQER-------LIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAE 149
+ L+ Y ER +V +Y+P+ C N+ RR +A
Sbjct: 82 VQLQSYFYTLGERDRRDIYLNVVMEYVPDTLH----------RCCRNYYRR-QVAPPPIL 130
Query: 150 GIVYLH---------HHATPHIIHRDIKASNVLLD-ADFKAQVADFGFA-KLIPD--GAT 196
V+L H + ++ HRDIK NVL++ AD ++ DFG A KL P
Sbjct: 131 IKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA 190
Query: 197 HVTTRVKGTLGYLAPEYAMLGK-ASESCDVYSFGILLLELASGKKPIEKVNSA 248
++ +R Y APE + + + D++S G + E+ G+ NSA
Sbjct: 191 YICSRY-----YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA 238
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 16/166 (9%)
Query: 84 EVEILARVR-HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD 142
EV+IL +V H N++ L+ +V+D M + L+
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLM----KKGELFDYLTEKVTLSEKETRK 128
Query: 143 IAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRV 202
I E I LH +I+HRD+K N+LLD D ++ DFGF+ + G V
Sbjct: 129 IMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LRSV 183
Query: 203 KGTLGYLAPEYAMLGK------ASESCDVYSFGILLLELASGKKPI 242
GT YLAPE + D++S G+++ L +G P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 11/205 (5%)
Query: 39 NFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVRHKN 95
NF K+GEG +G VY + G +A+ ++++ + + E+ +L + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 96 LLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
++ L + +V++++ L + +G+ + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCH 120
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAM 215
H ++HRD+K N+L++ + ++ADFG A+ T V TL Y APE +
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 176
Query: 216 LGK-ASESCDVYSFGILLLELASGK 239
K S + D++S G + E+ + +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 11/205 (5%)
Query: 39 NFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVRHKN 95
NF K+GEG +G VY + G +A+ ++++ + + E+ +L + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 96 LLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
++ L + +V++++ L + +G+ + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCH 119
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAM 215
H ++HRD+K N+L++ + ++ADFG A+ T V TL Y APE +
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 175
Query: 216 LGK-ASESCDVYSFGILLLELASGK 239
K S + D++S G + E+ + +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYL 209
GI +LH + IIHRD+K SN+++ +D ++ DFG A+ G + + T T Y
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYR 193
Query: 210 APEYAMLGKASESCDVYSFGILLLELASG 238
APE + E+ D++S G ++ E+ G
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 20/182 (10%)
Query: 65 IAVKRL-KVWSNKAEMEFAV-EVEILARVRHKNLLSLRGYCA------EGQERLIVYDYM 116
+A+K+L + + N+ + A E+ ++ V HKN++ L E Q+ IV + M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 117 PNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA 176
+ L+ R + GI +LH + IIHRD+K SN+++ +
Sbjct: 112 -------DANLSQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKS 161
Query: 177 DFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELA 236
D ++ DFG A+ G + + T T Y APE + E+ D++S G ++ E+
Sbjct: 162 DATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
Query: 237 SG 238
G
Sbjct: 220 KG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYL 209
GI +LH + IIHRD+K SN+++ +D ++ DFG A+ G + + T T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYR 192
Query: 210 APEYAMLGKASESCDVYSFGILLLELASG 238
APE + E+ D++S G ++ E+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYL 209
GI +LH + IIHRD+K SN+++ +D ++ DFG A+ G + + T T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYR 192
Query: 210 APEYAMLGKASESCDVYSFGILLLELASG 238
APE + E+ D++S G ++ E+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYL 209
GI +LH + IIHRD+K SN+++ +D ++ DFG A+ G + + T T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYR 192
Query: 210 APEYAMLGKASESCDVYSFGILLLELASG 238
APE + E+ D++S G ++ E+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARVR 92
+ NF K+GEG +G VY + G +A+K++++ + + E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 93 HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIV 152
H N++ L + +V++++ L + +G+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLA 120
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG----TLGY 208
+ H H ++HRD+K N+L++ + ++ADFG A+ A V R TL Y
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEVVTLWY 172
Query: 209 LAPEYAMLGK-ASESCDVYSFGILLLELASGK 239
APE + K S + D++S G + E+ + +
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYL 209
GI +LH + IIHRD+K SN+++ +D ++ DFG A+ G + + T T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYR 192
Query: 210 APEYAMLGKASESCDVYSFGILLLELASG 238
APE + E+ D++S G ++ E+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 14/105 (13%)
Query: 153 YLHHHATPHIIHRDIKASNVLLDAD--FKAQVADFGFAK---LIPDGATHVTTRVKGTLG 207
YLH+ I HRDIK N L + F+ ++ DFG +K + +G + T GT
Sbjct: 183 YLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPY 239
Query: 208 YLAPEYAMLGKASES----CDVYSFGILLLELASGKKPIEKVNSA 248
++APE +L +ES CD +S G+LL L G P VN A
Sbjct: 240 FVAPE--VLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDA 282
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 20/183 (10%)
Query: 65 IAVKRL-KVWSNKAEMEFAV-EVEILARVRHKNLLSL------RGYCAEGQERLIVYDYM 116
+A+K+L + + N+ + A E+ ++ V HKN++SL + E Q+ +V + M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 117 PNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA 176
+ L+ R + GI +LH + IIHRD+K SN+++ +
Sbjct: 112 -------DANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKS 161
Query: 177 DFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELA 236
D ++ DFG A+ G + + T T Y APE + E+ D++S G ++ E+
Sbjct: 162 DXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
Query: 237 SGK 239
K
Sbjct: 220 RHK 222
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 99/226 (43%), Gaps = 23/226 (10%)
Query: 36 ATNNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKA-----EMEFAVEVEILA 89
AT+ + ++G G +G+VY + G +A+K ++V + + EV +L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 90 RVR---HKNLLSLRGYCAEGQ-----ERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRM 141
R+ H N++ L CA + + +V++++ L
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG---LPAETIK 123
Query: 142 DIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTR 201
D+ G+ +LH + I+HRD+K N+L+ + ++ADFG A++ T
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALTP 178
Query: 202 VKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNS 247
V TL Y APE + + D++S G + E+ +KP+ NS
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNS 223
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 20/185 (10%)
Query: 62 GSQIAVKRL-KVWSNKAEMEFAV-EVEILARVRHKNLLSL------RGYCAEGQERLIVY 113
G +AVK+L + + N+ + A E+ +L V HKN++SL + E Q+ +V
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 106
Query: 114 DYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVL 173
+ M L+ R + GI +LH + IIHRD+K SN++
Sbjct: 107 ELMDANLCQVIHME-------LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIV 156
Query: 174 LDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLL 233
+ +D ++ DFG A+ + T T Y APE + E+ D++S G ++
Sbjct: 157 VKSDCTLKILDFGLARTA--STNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 214
Query: 234 ELASG 238
EL G
Sbjct: 215 ELVKG 219
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 106/228 (46%), Gaps = 27/228 (11%)
Query: 45 KLGEGGFGSVYWGQLWDGSQI-AVKRLKVWSNKAEMEFAV--EVEILARVRHKNLLSLRG 101
K+GEG +G+V+ + + +I A+KR+++ + + + E+ +L ++HKN++ L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 102 YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSA------EGIVYLH 155
++ +V+++ C N +D I + +G+ + H
Sbjct: 69 VLHSDKKLTLVFEFC------DQDLKKYFDSC----NGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAM 215
+++HRD+K N+L++ + + ++A+FG A+ + V TL Y P+
Sbjct: 119 SR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLF 174
Query: 216 LGKA-SESCDVYSFGILLLELASGKKPI---EKVNSAIKRTITDWALP 259
K S S D++S G + ELA+ +P+ V+ +KR P
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTP 222
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGY 208
+GI YLH+ IIHRDIK SN+L+ D ++ADFG + G+ + + GT +
Sbjct: 148 KGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEF-KGSDALLSNTVGTPAF 203
Query: 209 LAPEYAMLGK---ASESCDVYSFGILLLELASGKKPI 242
+APE + + ++ DV++ G+ L G+ P
Sbjct: 204 MAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 164 HRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESC 223
HRD+K N+L+ AD A + DFG A D GTL Y APE A+
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 224 DVYSFGILLLELASGKKPIE---------KVNSAIKRTIT 254
D+Y+ +L E +G P + +N AI R T
Sbjct: 217 DIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIPRPST 256
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 162 IIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASE 221
++HRD+K +NV LD ++ DFG A+++ V GT Y++PE +E
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-GTPYYMSPEQMNRMSYNE 195
Query: 222 SCDVYSFGILLLELASGKKPI 242
D++S G LL EL + P
Sbjct: 196 KSDIWSLGCLLYELCALMPPF 216
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 103/250 (41%), Gaps = 44/250 (17%)
Query: 26 RIFSLKELHSATNNFNYDNK-LGEGGFGSVYWGQLWDGSQIAVKRLKV-WSNKAEMEFAV 83
RI ++ + N K LG G G+V + + G +AVKR+ + + + A ME +
Sbjct: 2 RIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKL 61
Query: 84 EVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRM-- 141
E H N++ R YC+E +R + Y+ + + + N ++
Sbjct: 62 LTE---SDDHPNVI--RYYCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQK 113
Query: 142 -----DIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA-------------DFKAQVA 183
+ A G+ +LH + IIHRD+K N+L+ + + ++
Sbjct: 114 EYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170
Query: 184 DFGFAKLIPDGATHVTTRVK---GTLGYLAPE-------YAMLGKASESCDVYSFG-ILL 232
DFG K + G + T + GT G+ APE + + S D++S G +
Sbjct: 171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY 230
Query: 233 LELASGKKPI 242
L+ GK P
Sbjct: 231 YILSKGKHPF 240
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 20/183 (10%)
Query: 65 IAVKRL-KVWSNKAEMEFAV-EVEILARVRHKNLLSL------RGYCAEGQERLIVYDYM 116
+A+K+L + + N+ + A E+ ++ V HKN++SL + E Q+ +V + M
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 117 PNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA 176
+ L+ R + GI +LH + IIHRD+K SN+++ +
Sbjct: 150 -------DANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKS 199
Query: 177 DFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELA 236
D ++ DFG A+ G + + T T Y APE + E+ D++S G ++ E+
Sbjct: 200 DCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
Query: 237 SGK 239
K
Sbjct: 258 RHK 260
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYL 209
GI +LH IIHRD+K SN+++ +D ++ DFG A+ G + + T T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPEVVTRYYR 192
Query: 210 APEYAMLGKASESCDVYSFGILLLELASG 238
APE + E+ D++S G ++ E+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 21/207 (10%)
Query: 46 LGEGGFGSVYWGQLWDGS----QIAVKRLK---VWSNKAEMEFAVEVEILARVRHKNLLS 98
LGEG FG VY G + +AVK K NK + F E I+ + H +++
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK--FMSEAVIMKNLDHPHIVK 73
Query: 99 LRGYCAEGQERLI--VYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
L G E +I +Y Y L+ ++ ++ A+ E I
Sbjct: 74 LIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI----- 128
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAML 216
+ +HRDI N+L+ + ++ DFG ++ I D + + + + +++PE
Sbjct: 129 ----NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 184
Query: 217 GKASESCDVYSFGILLLELAS-GKKPI 242
+ + + DV+ F + + E+ S GK+P
Sbjct: 185 RRFTTASDVWMFAVCMWEILSFGKQPF 211
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 124/294 (42%), Gaps = 43/294 (14%)
Query: 30 LKELHSATNNFNYDNKLGEGGFGSVYWGQLW--DGS--QIAVKRLK---VWSNKAEMEFA 82
L+++ F LG+G FGSV QL DGS ++AVK LK + S+ E EF
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIE-EFL 73
Query: 83 VEVEILARVRHKNLLSLRGYCAEGQER------LIVYDYMPNXXXXXXXXXXXXXECLLN 136
E + H ++ L G + + +++ +M + E N
Sbjct: 74 REAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFN 133
Query: 137 WNRR--MDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDG 194
+ + + A G+ YL ++ + IHRD+ A N +L D VADFG ++ I G
Sbjct: 134 LPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSG 190
Query: 195 ATHVT-TRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELAS-GKKPIEKVNSAIKRT 252
+ K + +LA E + DV++FG+ + E+ + G+ P + +A
Sbjct: 191 DYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA---- 246
Query: 253 ITDWALPLACERKFSELADPRLNGNFVE---EELKRVVLVALTCAHSKPEKRPT 303
E+ + + GN ++ E ++ V + C + P++RP+
Sbjct: 247 ---------------EIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPS 285
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 20/183 (10%)
Query: 65 IAVKRL-KVWSNKAEMEFAV-EVEILARVRHKNLLSL------RGYCAEGQERLIVYDYM 116
+A+K+L + + N+ + A E+ ++ V HKN++SL + E Q+ +V + M
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 117 PNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA 176
+ L+ R + GI +LH + IIHRD+K SN+++ +
Sbjct: 150 -------DANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKS 199
Query: 177 DFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELA 236
D ++ DFG A+ G + + T T Y APE + E+ D++S G ++ E+
Sbjct: 200 DCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
Query: 237 SGK 239
K
Sbjct: 258 RHK 260
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 20/183 (10%)
Query: 65 IAVKRL-KVWSNKAEMEFAV-EVEILARVRHKNLLSL------RGYCAEGQERLIVYDYM 116
+A+K+L + + N+ + A E+ ++ V HKN++SL + E Q+ +V + M
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 112
Query: 117 PNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA 176
+ L+ R + GI +LH + IIHRD+K SN+++ +
Sbjct: 113 -------DANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKS 162
Query: 177 DFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELA 236
D ++ DFG A+ G + + T T Y APE + E+ D++S G ++ E+
Sbjct: 163 DCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
Query: 237 SGK 239
K
Sbjct: 221 RHK 223
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 20/183 (10%)
Query: 65 IAVKRL-KVWSNKAEMEFAV-EVEILARVRHKNLLSL------RGYCAEGQERLIVYDYM 116
+A+K+L + + N+ + A E+ ++ V HKN++SL + E Q+ +V + M
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 105
Query: 117 PNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA 176
+ L+ R + GI +LH IIHRD+K SN+++ +
Sbjct: 106 -------DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKS 155
Query: 177 DFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELA 236
D ++ DFG A+ G + + T T Y APE + E+ D++S G ++ E+
Sbjct: 156 DCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
Query: 237 SGK 239
K
Sbjct: 214 RHK 216
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 92/228 (40%), Gaps = 24/228 (10%)
Query: 27 IFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEM------- 79
I +++L ++ +G G FG V + S V +K+ S K EM
Sbjct: 58 INKIRDLRMKAEDYEVVKVIGRGAFGEVQLVR--HKSTRKVYAMKLLS-KFEMIKRSDSA 114
Query: 80 EFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNR 139
F E +I+A ++ L + + +V +YMP E W R
Sbjct: 115 FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE---KWAR 171
Query: 140 RMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFA-KLIPDGATHV 198
+AE ++ L + IHRD+K N+LLD ++ADFG K+ +G
Sbjct: 172 -----FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 226
Query: 199 TTRVKGTLGYLAPEYAML----GKASESCDVYSFGILLLELASGKKPI 242
T V GT Y++PE G CD +S G+ L E+ G P
Sbjct: 227 DTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 20/183 (10%)
Query: 65 IAVKRL-KVWSNKAEMEFAV-EVEILARVRHKNLLSL------RGYCAEGQERLIVYDYM 116
+A+K+L + + N+ + A E+ ++ V HKN++SL + E Q+ +V + M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 117 PNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA 176
+ L+ R + GI +LH + IIHRD+K SN+++ +
Sbjct: 112 -------DANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKS 161
Query: 177 DFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELA 236
D ++ DFG A+ G + + T T Y APE + E+ D++S G ++ E+
Sbjct: 162 DCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
Query: 237 SGK 239
K
Sbjct: 220 RHK 222
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 92/228 (40%), Gaps = 24/228 (10%)
Query: 27 IFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEM------- 79
I +++L ++ +G G FG V + S V +K+ S K EM
Sbjct: 63 INKIRDLRMKAEDYEVVKVIGRGAFGEVQLVR--HKSTRKVYAMKLLS-KFEMIKRSDSA 119
Query: 80 EFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNR 139
F E +I+A ++ L + + +V +YMP E W R
Sbjct: 120 FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE---KWAR 176
Query: 140 RMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFA-KLIPDGATHV 198
+AE ++ L + IHRD+K N+LLD ++ADFG K+ +G
Sbjct: 177 -----FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 231
Query: 199 TTRVKGTLGYLAPEYAML----GKASESCDVYSFGILLLELASGKKPI 242
T V GT Y++PE G CD +S G+ L E+ G P
Sbjct: 232 DTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 147 SAEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFA-KLIPDGATHVTTRVKGT 205
+AE ++ L + IHRD+K N+LLD ++ADFG K+ +G T V GT
Sbjct: 179 TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GT 237
Query: 206 LGYLAPEYAML----GKASESCDVYSFGILLLELASGKKPI 242
Y++PE G CD +S G+ L E+ G P
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 20/183 (10%)
Query: 65 IAVKRL-KVWSNKAEMEFAV-EVEILARVRHKNLLSL------RGYCAEGQERLIVYDYM 116
+A+K+L + + N+ + A E+ ++ V HKN++SL + E Q+ +V + M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 117 PNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA 176
+ L+ R + GI +LH + IIHRD+K SN+++ +
Sbjct: 112 -------DANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKS 161
Query: 177 DFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELA 236
D ++ DFG A+ G + + T T Y APE + E+ D++S G ++ E+
Sbjct: 162 DCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
Query: 237 SGK 239
K
Sbjct: 220 RHK 222
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 21/207 (10%)
Query: 46 LGEGGFGSVYWGQLWDGS----QIAVKRLK---VWSNKAEMEFAVEVEILARVRHKNLLS 98
LGEG FG VY G + +AVK K NK + F E I+ + H +++
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK--FMSEAVIMKNLDHPHIVK 77
Query: 99 LRGYCAEGQERLI--VYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
L G E +I +Y Y L+ ++ ++ A+ E I
Sbjct: 78 LIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI----- 132
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAML 216
+ +HRDI N+L+ + ++ DFG ++ I D + + + + +++PE
Sbjct: 133 ----NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 188
Query: 217 GKASESCDVYSFGILLLELAS-GKKPI 242
+ + + DV+ F + + E+ S GK+P
Sbjct: 189 RRFTTASDVWMFAVCMWEILSFGKQPF 215
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 100/230 (43%), Gaps = 18/230 (7%)
Query: 26 RIFSLKELHSATNNFNYDNK---LGEGGFGSVY-WGQLWDGSQIAVKRLKVWSNKAEMEF 81
RI + K+ A N+F +K LG G FG V+ + G ++A K +K K + E
Sbjct: 76 RIVTAKQ--GAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEV 133
Query: 82 AVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRM 141
E+ ++ ++ H NL+ L + ++V +Y+ L+ M
Sbjct: 134 KNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFM 193
Query: 142 DIAIGSAEGIVYLHHHATPHIIHRDIKASNVL-LDADFKA-QVADFGFAKLI-PDGATHV 198
EGI ++H +I+H D+K N+L ++ D K ++ DFG A+ P V
Sbjct: 194 KQI---CEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV 247
Query: 199 TTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSA 248
GT +LAPE S D++S G++ L SG P N A
Sbjct: 248 NF---GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA 294
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 20/183 (10%)
Query: 65 IAVKRL-KVWSNKAEMEFAV-EVEILARVRHKNLLSL------RGYCAEGQERLIVYDYM 116
+A+K+L + + N+ + A E+ ++ V HKN++SL + E Q+ +V + M
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 112
Query: 117 PNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA 176
+ L+ R + GI +LH + IIHRD+K SN+++ +
Sbjct: 113 -------DANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKS 162
Query: 177 DFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELA 236
D ++ DFG A+ G + + T T Y APE + E+ D++S G ++ E+
Sbjct: 163 DCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
Query: 237 SGK 239
K
Sbjct: 221 RHK 223
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 21/207 (10%)
Query: 46 LGEGGFGSVYWGQLWDGS----QIAVKRLK---VWSNKAEMEFAVEVEILARVRHKNLLS 98
LGEG FG VY G + +AVK K NK + F E I+ + H +++
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK--FMSEAVIMKNLDHPHIVK 89
Query: 99 LRGYCAEGQERLI--VYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
L G E +I +Y Y L+ ++ ++ A+ E I
Sbjct: 90 LIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI----- 144
Query: 157 HATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAML 216
+ +HRDI N+L+ + ++ DFG ++ I D + + + + +++PE
Sbjct: 145 ----NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 200
Query: 217 GKASESCDVYSFGILLLELAS-GKKPI 242
+ + + DV+ F + + E+ S GK+P
Sbjct: 201 RRFTTASDVWMFAVCMWEILSFGKQPF 227
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 20/183 (10%)
Query: 65 IAVKRL-KVWSNKAEMEFAV-EVEILARVRHKNLLSL------RGYCAEGQERLIVYDYM 116
+A+K+L + + N+ + A E+ ++ V HKN++SL + E Q+ +V + M
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 104
Query: 117 PNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA 176
+ L+ R + GI +LH IIHRD+K SN+++ +
Sbjct: 105 -------DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKS 154
Query: 177 DFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELA 236
D ++ DFG A+ G + + T T Y APE + E+ D++S G ++ E+
Sbjct: 155 DCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
Query: 237 SGK 239
K
Sbjct: 213 RHK 215
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 20/183 (10%)
Query: 65 IAVKRL-KVWSNKAEMEFAV-EVEILARVRHKNLLSL------RGYCAEGQERLIVYDYM 116
+A+K+L + + N+ + A E+ ++ V HKN++SL + E Q+ +V + M
Sbjct: 51 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 110
Query: 117 PNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA 176
+ L+ R + GI +LH IIHRD+K SN+++ +
Sbjct: 111 -------DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKS 160
Query: 177 DFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELA 236
D ++ DFG A+ G + + T T Y APE + E+ D++S G ++ E+
Sbjct: 161 DCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
Query: 237 SGK 239
K
Sbjct: 219 RHK 221
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 20/183 (10%)
Query: 65 IAVKRL-KVWSNKAEMEFAV-EVEILARVRHKNLLSL------RGYCAEGQERLIVYDYM 116
+A+K+L + + N+ + A E+ ++ V HKN++SL + E Q+ +V + M
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 105
Query: 117 PNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA 176
+ L+ R + GI +LH + IIHRD+K SN+++ +
Sbjct: 106 -------DANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKS 155
Query: 177 DFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELA 236
D ++ DFG A+ G + + T T Y APE + E+ D++S G ++ E+
Sbjct: 156 DCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
Query: 237 SGK 239
K
Sbjct: 214 RHK 216
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 101/239 (42%), Gaps = 29/239 (12%)
Query: 37 TNNFNYDNKLGEGGFGSVYWGQLWDGSQ--IAVKRLKVWSNKAEMEFAVEVEILARVRHK 94
++ F +++LG G VY + G+Q A+K LK +K + E+ +L R+ H
Sbjct: 52 SDFFEVESELGRGATSIVYRCK-QKGTQKPYALKVLKKTVDKKIVR--TEIGVLLRLSHP 108
Query: 95 NLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRR--MDIAIGSAEGIV 152
N++ L+ E +V + + ++ R D E +
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY------YSERDAADAVKQILEAVA 162
Query: 153 YLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHVTTRVKGTLGYL 209
YLH + I+HRD+K N+L D ++ADFG +K++ T V GT GY
Sbjct: 163 YLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT--VCGTPGYC 217
Query: 210 APEYAMLGKASESCDVYSFGILLLELASGKKPI--EKVNSAIKRTITDWALPLACERKF 266
APE D++S GI+ L G +P E+ + + R I L CE F
Sbjct: 218 APEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRI------LNCEYYF 270
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 30/172 (17%)
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFA-KLIPDGATHVTTRVKGTLG 207
E + +H H I+H D+K +N L+ D ++ DFG A ++ PD + V GT+
Sbjct: 166 EAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 221
Query: 208 YLAPEYAMLGKASE-----------SCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
Y+ PE +S DV+S G +L + GK P +++ + I
Sbjct: 222 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS------ 275
Query: 257 ALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
K + DP F + K + V C P++R ++ E+L
Sbjct: 276 --------KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 94/235 (40%), Gaps = 26/235 (11%)
Query: 30 LKELHSATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFA 82
+KE + + LG GGFGSVY G ++ D +A+K R+ W
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 83 VEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD 142
+EV +L +V G+ G RL+ + P+ + R
Sbjct: 61 MEVVLLKKVS-------SGF--SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA 111
Query: 143 IAIGSAEGIVYLHHHATPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGAT 196
+ A + A H ++HRDIK N+L+D + + ++ DFG L+ D
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 169
Query: 197 HVTTRVKGTLGYLAPEYAMLGKA-SESCDVYSFGILLLELASGKKPIEKVNSAIK 250
V T GT Y PE+ + S V+S GILL ++ G P E I+
Sbjct: 170 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 223
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYL 209
GI +LH IIHRD+K SN+++ +D ++ DFG A+ G + + T Y
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMVPFVVTRYYR 194
Query: 210 APEYAMLGKASESCDVYSFGILLLELASG 238
APE + E+ D++S G ++ E+ G
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 94/235 (40%), Gaps = 26/235 (11%)
Query: 30 LKELHSATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFA 82
+KE + + LG GGFGSVY G ++ D +A+K R+ W
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 83 VEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD 142
+EV +L +V G+ G RL+ + P+ + R
Sbjct: 61 MEVVLLKKVS-------SGF--SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA 111
Query: 143 IAIGSAEGIVYLHHHATPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGAT 196
+ A + A H ++HRDIK N+L+D + + ++ DFG L+ D
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 169
Query: 197 HVTTRVKGTLGYLAPEYAMLGKA-SESCDVYSFGILLLELASGKKPIEKVNSAIK 250
V T GT Y PE+ + S V+S GILL ++ G P E I+
Sbjct: 170 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 223
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 30/172 (17%)
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFA-KLIPDGATHVTTRVKGTLG 207
E + +H H I+H D+K +N L+ D ++ DFG A ++ PD + V GT+
Sbjct: 166 EAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 221
Query: 208 YLAPEYAMLGKASE-----------SCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
Y+ PE +S DV+S G +L + GK P +++ + I
Sbjct: 222 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS------ 275
Query: 257 ALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
K + DP F + K + V C P++R ++ E+L
Sbjct: 276 --------KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 18/156 (11%)
Query: 155 HHHATPHIIHRDIKASNVLLDADFKAQVADFGFAK-LIPDGATHVTTRVKGTLG--YLAP 211
H H+ +IHRD+K SNVL++A + + DFG + L+ D A + K + P
Sbjct: 151 HLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINP 210
Query: 212 EYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKRTITDWALPLACERKFSELAD 271
E G + +S D++S GI +ELA + P + W P ++ E
Sbjct: 211 ELNQKGYSVKS-DIWSLGITXIELAILRFPYDS-----------WGTPFQQLKQVVEEPS 258
Query: 272 PRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEV 307
P+L + E V C ++RPT E+
Sbjct: 259 PQLPADKFSAEF---VDFTSQCLKKNSKERPTYPEL 291
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 30/172 (17%)
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFA-KLIPDGATHVTTRVKGTLG 207
E + +H H I+H D+K +N L+ D ++ DFG A ++ PD + V GT+
Sbjct: 138 EAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 193
Query: 208 YLAPEYAMLGKASE-----------SCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
Y+ PE +S DV+S G +L + GK P +++ + I
Sbjct: 194 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS------ 247
Query: 257 ALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
K + DP F + K + V C P++R ++ E+L
Sbjct: 248 --------KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYL 209
GI +LH + IIHRD+K SN+++ +D ++ DFG A+ G + + T T Y
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYR 186
Query: 210 APEYAMLGKASESCDVYSFGILLLELASGK 239
APE + E+ D++S G ++ E+ K
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 95/238 (39%), Gaps = 26/238 (10%)
Query: 30 LKELHSATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFA 82
+KE + + LG GGFGSVY G ++ D +A+K R+ W
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 83 VEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD 142
+EV +L +V G+ G RL+ + P+ + R
Sbjct: 61 MEVVLLKKVS-------SGF--SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA 111
Query: 143 IAIGSAEGIVYLHHHATPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGAT 196
+ A + A H ++HRDIK N+L+D + + ++ DFG L+ D
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 169
Query: 197 HVTTRVKGTLGYLAPEYAMLGKA-SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
V T GT Y PE+ + S V+S GILL ++ G P E I+ +
Sbjct: 170 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQV 226
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYL 209
GI +LH + IIHRD+K SN+++ +D ++ DFG A+ G + + T T Y
Sbjct: 143 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYR 197
Query: 210 APEYAMLGKASESCDVYSFGILLLELASGK 239
APE + E+ D++S G ++ E+ K
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 30/172 (17%)
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFA-KLIPDGATHVTTRVKGTLG 207
E + +H H I+H D+K +N L+ D ++ DFG A ++ PD + V GT+
Sbjct: 122 EAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 177
Query: 208 YLAPEYAMLGKASE-----------SCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
Y+ PE +S DV+S G +L + GK P +++ + I
Sbjct: 178 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS------ 231
Query: 257 ALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
K + DP F + K + V C P++R ++ E+L
Sbjct: 232 --------KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 275
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 30/172 (17%)
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFA-KLIPDGATHVTTRVKGTLG 207
E + +H H I+H D+K +N L+ D ++ DFG A ++ PD + V GT+
Sbjct: 119 EAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 174
Query: 208 YLAPEYAMLGKASE-----------SCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
Y+ PE +S DV+S G +L + GK P +++ + I
Sbjct: 175 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI------- 227
Query: 257 ALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
K + DP F + K + V C P++R ++ E+L
Sbjct: 228 -------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 209 LAPEYAMLG--KASESCDVYSFGILLLELASGK 239
APE ML +++ D++S G ++ EL +G+
Sbjct: 189 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 92/209 (44%), Gaps = 13/209 (6%)
Query: 38 NNFNYDNKLGEGGFGSVYW-GQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNL 96
++++ +LG G FG V+ + G+ A K + + E++ ++ +RH L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 97 LSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
++L + E +++Y++M ++ + ++ +G+ ++H
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK---MSEDEAVEYMRQVCKGLCHMHE 167
Query: 157 HATPHIIHRDIKASNVLLDA--DFKAQVADFGF-AKLIPDGATHVTTRVKGTLGYLAPEY 213
+ + +H D+K N++ + ++ DFG A L P + VTT GT + APE
Sbjct: 168 N---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEV 221
Query: 214 AMLGKASESCDVYSFGILLLELASGKKPI 242
A D++S G+L L SG P
Sbjct: 222 AEGKPVGYYTDMWSVGVLSYILLSGLSPF 250
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 30/172 (17%)
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFA-KLIPDGATHVTTRVKGTLG 207
E + +H H I+H D+K +N L+ D ++ DFG A ++ PD + V GT+
Sbjct: 118 EAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 173
Query: 208 YLAPEYAMLGKASE-----------SCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
Y+ PE +S DV+S G +L + GK P +++ + I
Sbjct: 174 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS------ 227
Query: 257 ALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
K + DP F + K + V C P++R ++ E+L
Sbjct: 228 --------KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 271
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 148 GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WY 199
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 142 DIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHV 198
+I E I YLH + +I HRD+K N+L + + ++ DFGFAK + +H
Sbjct: 165 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHN 218
Query: 199 T-TRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
+ T T Y+APE K +SCD++S G+++ L G P
Sbjct: 219 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WY 193
Query: 209 LAPEYAMLG--KASESCDVYSFGILLLELASGK 239
APE ML +++ D++S G ++ EL +G+
Sbjct: 194 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 142 DIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHV 198
+I E I YLH + +I HRD+K N+L + + ++ DFGFAK + +H
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHN 172
Query: 199 T-TRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
+ T T Y+APE K +SCD++S G+++ L G P
Sbjct: 173 SLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WY 193
Query: 209 LAPEYAMLG--KASESCDVYSFGILLLELASGK 239
APE ML +++ D++S G ++ EL +G+
Sbjct: 194 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 20/185 (10%)
Query: 62 GSQIAVKRL-KVWSNKAEMEFAV-EVEILARVRHKNLLSL------RGYCAEGQERLIVY 113
G +AVK+L + + N+ + A E+ +L V HKN++SL + E Q+ +V
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 114 DYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVL 173
+ M L+ R + GI +LH + IIHRD+K SN++
Sbjct: 109 ELMDANLCQVIHME-------LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIV 158
Query: 174 LDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLL 233
+ +D ++ DFG A+ + T T Y APE + + + D++S G ++
Sbjct: 159 VKSDCTLKILDFGLART--ACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMG 216
Query: 234 ELASG 238
EL G
Sbjct: 217 ELVKG 221
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 144 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WY 195
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 144 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WY 195
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 94/235 (40%), Gaps = 26/235 (11%)
Query: 30 LKELHSATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFA 82
+KE + + LG GGFGSVY G ++ D +A+K R+ W
Sbjct: 23 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 82
Query: 83 VEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMD 142
+EV +L +V G+ G RL+ + P+ + R
Sbjct: 83 MEVVLLKKVS-------SGF--SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA 133
Query: 143 IAIGSAEGIVYLHHHATPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGAT 196
+ A + A H ++HRDIK N+L+D + + ++ DFG L+ D
Sbjct: 134 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 191
Query: 197 HVTTRVKGTLGYLAPEYAMLGKA-SESCDVYSFGILLLELASGKKPIEKVNSAIK 250
V T GT Y PE+ + S V+S GILL ++ G P E I+
Sbjct: 192 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 245
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 36/225 (16%)
Query: 39 NFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFA-VEVEILARV-RHKNL 96
+F + LG G G++ + ++D +AVKR+ FA EV++L H N+
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC----FSFADREVQLLRESDEHPNV 80
Query: 97 LSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWN-RRMDIAIGSAEGIVYLH 155
+ R +C E + + Y+ + + + + + G+ +LH
Sbjct: 81 I--RYFCTEKDRQ---FQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH 135
Query: 156 HHATPHIIHRDIKASNVLLD-----ADFKAQVADFGFAKLIPDGATHVTTR--VKGTLGY 208
+ +I+HRD+K N+L+ KA ++DFG K + G + R V GT G+
Sbjct: 136 ---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGW 192
Query: 209 LAPEYAMLGKASESC--------DVYSFGILLLELAS-GKKPIEK 244
+APE ML SE C D++S G + + S G P K
Sbjct: 193 IAPE--ML---SEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGK 232
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFAV 83
KE + + LG GGFGSVY G ++ D +A+K R+ W +
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 84 EVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
EV +L +V G+ G RL+ + P+ + R +
Sbjct: 61 EVVLLKKVS-------SGF--SGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGAL 111
Query: 144 AIGSAEGIVYLHHHATPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGATH 197
A + A H ++HRDIK N+L+D + + ++ DFG L+ D
Sbjct: 112 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 168
Query: 198 VTTRVKGTLGYLAPEYAMLGKA-SESCDVYSFGILLLELASGKKPIEKVNSAIK 250
V T GT Y PE+ + S V+S GILL ++ G P E I+
Sbjct: 169 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 222
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 142 DIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHV 198
+I E I YLH + +I HRD+K N+L + + ++ DFGFAK + +H
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHN 174
Query: 199 T-TRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
+ T T Y+APE K +SCD++S G+++ L G P
Sbjct: 175 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 142 DIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHV 198
+I E I YLH + +I HRD+K N+L + + ++ DFGFAK + +H
Sbjct: 171 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHN 224
Query: 199 T-TRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
+ T T Y+APE K +SCD++S G+++ L G P
Sbjct: 225 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 269
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 144 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WY 195
Query: 209 LAPEYAMLG--KASESCDVYSFGILLLELASGK 239
APE ML +++ D++S G ++ EL +G+
Sbjct: 196 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 142 DIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHV 198
+I E I YLH + +I HRD+K N+L + + ++ DFGFAK + +H
Sbjct: 126 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHN 179
Query: 199 T-TRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
+ T T Y+APE K +SCD++S G+++ L G P
Sbjct: 180 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 224
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 142 DIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHV 198
+I E I YLH + +I HRD+K N+L + + ++ DFGFAK + +H
Sbjct: 125 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHN 178
Query: 199 T-TRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
+ T T Y+APE K +SCD++S G+++ L G P
Sbjct: 179 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 223
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 37 TNNFNYDNKLGEGGFGSV------YWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILAR 90
++N++ +LG+G F V G + I K+L S + + E I +
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL---SARDFQKLEREARICRK 60
Query: 91 VRHKNLLSLRGYCAEGQERLIVYDYMP------NXXXXXXXXXXXXXECLLNWNRRMDIA 144
++H N++ L E +V+D + + C+
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ-------- 112
Query: 145 IGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKA---QVADFGFAKLIPDG-ATHVTT 200
E I Y H + I+HR++K N+LL + K ++ADFG A + D A H
Sbjct: 113 --ILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--- 164
Query: 201 RVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI-----EKVNSAIKRTITD 255
GT GYL+PE S+ D+++ G++L L G P ++ + IK D
Sbjct: 165 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 224
Query: 256 WALP 259
+ P
Sbjct: 225 YPSP 228
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFAV 83
KE + + LG GGFGSVY G ++ D +A+K R+ W +
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 84 EVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
EV +L +V G+ G RL+ + P+ + R +
Sbjct: 61 EVVLLKKVS-------SGF--SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGAL 111
Query: 144 AIGSAEGIVYLHHHATPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGATH 197
A + A H ++HRDIK N+L+D + + ++ DFG L+ D
Sbjct: 112 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 168
Query: 198 VTTRVKGTLGYLAPEYAMLGKA-SESCDVYSFGILLLELASGKKPIEKVNSAIK 250
V T GT Y PE+ + S V+S GILL ++ G P E I+
Sbjct: 169 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 222
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 142 DIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHV 198
+I E I YLH + +I HRD+K N+L + + ++ DFGFAK + +H
Sbjct: 127 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHN 180
Query: 199 T-TRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
+ T T Y+APE K +SCD++S G+++ L G P
Sbjct: 181 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 142 DIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHV 198
+I E I YLH + +I HRD+K N+L + + ++ DFGFAK + +H
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHN 172
Query: 199 T-TRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
+ T T Y+APE K +SCD++S G+++ L G P
Sbjct: 173 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 209 LAPEYAMLGKA--SESCDVYSFGILLLELASGK 239
APE ML +++ D++S G ++ EL +G+
Sbjct: 189 RAPE-IMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 37 TNNFNYDNKLGEGGFGSV------YWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILAR 90
++N++ +LG+G F V G + I K+L S + + E I +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL---SARDFQKLEREARICRK 61
Query: 91 VRHKNLLSLRGYCAEGQERLIVYDYMP------NXXXXXXXXXXXXXECLLNWNRRMDIA 144
++H N++ L E +V+D + + C+
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ-------- 113
Query: 145 IGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKA---QVADFGFAKLIPDG-ATHVTT 200
E I Y H + I+HR++K N+LL + K ++ADFG A + D A H
Sbjct: 114 --ILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--- 165
Query: 201 RVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI-----EKVNSAIKRTITD 255
GT GYL+PE S+ D+++ G++L L G P ++ + IK D
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 225
Query: 256 WALP 259
+ P
Sbjct: 226 YPSP 229
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 37 TNNFNYDNKLGEGGFGSV------YWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILAR 90
++N++ +LG+G F V G + I K+L S + + E I +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL---SARDFQKLEREARICRK 61
Query: 91 VRHKNLLSLRGYCAEGQERLIVYDYMP------NXXXXXXXXXXXXXECLLNWNRRMDIA 144
++H N++ L E +V+D + + C+
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ-------- 113
Query: 145 IGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKA---QVADFGFAKLIPDG-ATHVTT 200
E I Y H + I+HR++K N+LL + K ++ADFG A + D A H
Sbjct: 114 --ILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--- 165
Query: 201 RVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI-----EKVNSAIKRTITD 255
GT GYL+PE S+ D+++ G++L L G P ++ + IK D
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 225
Query: 256 WALP 259
+ P
Sbjct: 226 YPSP 229
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 142 DIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHV 198
+I E I YLH + +I HRD+K N+L + + ++ DFGFAK + +H
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHN 174
Query: 199 T-TRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
+ T T Y+APE K +SCD++S G+++ L G P
Sbjct: 175 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 37 TNNFNYDNKLGEGGFGSV------YWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILAR 90
++N++ +LG+G F V G + I K+L S + + E I +
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL---SARDFQKLEREARICRK 84
Query: 91 VRHKNLLSLRGYCAEGQERLIVYDYMP------NXXXXXXXXXXXXXECLLNWNRRMDIA 144
++H N++ L E +V+D + + C+
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI------- 137
Query: 145 IGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKA---QVADFGFAKLIPDG-ATHVTT 200
E I Y H + I+HR++K N+LL + K ++ADFG A + D A H
Sbjct: 138 ---LESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--- 188
Query: 201 RVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI-----EKVNSAIKRTITD 255
GT GYL+PE S+ D+++ G++L L G P ++ + IK D
Sbjct: 189 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 248
Query: 256 WALP 259
+ P
Sbjct: 249 YPSP 252
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 209 LAPEYAMLG--KASESCDVYSFGILLLELASGK 239
APE ML +++ D++S G ++ EL +G+
Sbjct: 189 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 142 DIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHV 198
+I E I YLH + +I HRD+K N+L + + ++ DFGFAK + +H
Sbjct: 120 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHN 173
Query: 199 T-TRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
+ T T Y+APE K +SCD++S G+++ L G P
Sbjct: 174 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 218
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 193
Query: 209 LAPEYAMLG--KASESCDVYSFGILLLELASGK 239
APE ML +++ D++S G ++ EL +G+
Sbjct: 194 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 136 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 187
Query: 209 LAPEYAMLG--KASESCDVYSFGILLLELASGK 239
APE ML +++ D++S G ++ EL +G+
Sbjct: 188 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 144 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 195
Query: 209 LAPEYAMLG--KASESCDVYSFGILLLELASGK 239
APE ML +++ D++S G ++ EL +G+
Sbjct: 196 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFAV 83
KE + + LG GGFGSVY G ++ D +A+K R+ W +
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 84 EVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
EV +L +V G+ G RL+ + P+ + R +
Sbjct: 76 EVVLLKKVS-------SGF--SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGAL 126
Query: 144 AIGSAEGIVYLHHHATPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGATH 197
A + A H ++HRDIK N+L+D + + ++ DFG L+ D
Sbjct: 127 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 183
Query: 198 VTTRVKGTLGYLAPEYAMLGKA-SESCDVYSFGILLLELASGKKPIEKVNSAIK 250
V T GT Y PE+ + S V+S GILL ++ G P E I+
Sbjct: 184 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 237
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 92/209 (44%), Gaps = 13/209 (6%)
Query: 38 NNFNYDNKLGEGGFGSVYW-GQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNL 96
++++ +LG G FG V+ + G+ A K + + E++ ++ +RH L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 97 LSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHH 156
++L + E +++Y++M ++ + ++ +G+ ++H
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK---MSEDEAVEYMRQVCKGLCHMHE 273
Query: 157 HATPHIIHRDIKASNVLLDA--DFKAQVADFGF-AKLIPDGATHVTTRVKGTLGYLAPEY 213
+ + +H D+K N++ + ++ DFG A L P + VTT GT + APE
Sbjct: 274 N---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEV 327
Query: 214 AMLGKASESCDVYSFGILLLELASGKKPI 242
A D++S G+L L SG P
Sbjct: 328 AEGKPVGYYTDMWSVGVLSYILLSGLSPF 356
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 148 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 199
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 25/181 (13%)
Query: 79 MEFAV------------EVEILARV-RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXX 125
MEFAV E+EIL R +H N+++L+ +G+ +V + M
Sbjct: 48 MEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKI 107
Query: 126 XXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADF----KAQ 181
+ + + + + YLH ++HRD+K SN+L + +
Sbjct: 108 LR----QKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIR 160
Query: 182 VADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKP 241
+ DFGFAK + + T T ++APE +CD++S G+LL + +G P
Sbjct: 161 ICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
Query: 242 I 242
Sbjct: 220 F 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 139 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 190
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 94/237 (39%), Gaps = 26/237 (10%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFAV 83
KE + + LG GGFGSVY G ++ D +A+K R+ W +
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 84 EVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
EV +L +V G+ G RL+ + P+ + R +
Sbjct: 77 EVVLLKKVS-------SGF--SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGAL 127
Query: 144 AIGSAEGIVYLHHHATPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGATH 197
A + A H ++HRDIK N+L+D + + ++ DFG L+ D
Sbjct: 128 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 184
Query: 198 VTTRVKGTLGYLAPEYAMLGKA-SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
V T GT Y PE+ + S V+S GILL ++ G P E I+ +
Sbjct: 185 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQV 241
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 94/237 (39%), Gaps = 26/237 (10%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFAV 83
KE + + LG GGFGSVY G ++ D +A+K R+ W +
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 84 EVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
EV +L +V G+ G RL+ + P+ + R +
Sbjct: 77 EVVLLKKVS-------SGF--SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGAL 127
Query: 144 AIGSAEGIVYLHHHATPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGATH 197
A + A H ++HRDIK N+L+D + + ++ DFG L+ D
Sbjct: 128 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 184
Query: 198 VTTRVKGTLGYLAPEYAMLGKA-SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
V T GT Y PE+ + S V+S GILL ++ G P E I+ +
Sbjct: 185 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQV 241
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 143 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 194
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 143 GLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WY 194
Query: 209 LAPEYAMLG--KASESCDVYSFGILLLELASGK 239
APE ML +++ D++S G ++ EL +G+
Sbjct: 195 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 147 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 198
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFAV 83
KE + + LG GGFGSVY G ++ D +A+K R+ W +
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 84 EVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
EV +L +V G+ G RL+ + P+ + R +
Sbjct: 76 EVVLLKKVS-------SGF--SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGAL 126
Query: 144 AIGSAEGIVYLHHHATPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGATH 197
A + A H ++HRDIK N+L+D + + ++ DFG L+ D
Sbjct: 127 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 183
Query: 198 VTTRVKGTLGYLAPEYAMLGKA-SESCDVYSFGILLLELASGKKPIEKVNSAIK 250
V T GT Y PE+ + S V+S GILL ++ G P E I+
Sbjct: 184 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 237
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 149 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 200
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 139 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 190
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 149 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 200
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 139 GLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WY 190
Query: 209 LAPEYAMLG--KASESCDVYSFGILLLELASGK 239
APE ML +++ D++S G ++ EL +G+
Sbjct: 191 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 94/237 (39%), Gaps = 26/237 (10%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFAV 83
KE + + LG GGFGSVY G ++ D +A+K R+ W +
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 84 EVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
EV +L +V G+ G RL+ + P+ + R +
Sbjct: 77 EVVLLKKVS-------SGF--SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGAL 127
Query: 144 AIGSAEGIVYLHHHATPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGATH 197
A + A H ++HRDIK N+L+D + + ++ DFG L+ D
Sbjct: 128 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 184
Query: 198 VTTRVKGTLGYLAPEYAMLGKA-SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
V T GT Y PE+ + S V+S GILL ++ G P E I+ +
Sbjct: 185 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQV 241
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 149 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 200
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFAV 83
KE + + LG GGFGSVY G ++ D +A+K R+ W +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 84 EVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
EV +L +V G+ G RL+ + P+ + R +
Sbjct: 89 EVVLLKKVS-------SGF--SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGAL 139
Query: 144 AIGSAEGIVYLHHHATPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGATH 197
A + A H ++HRDIK N+L+D + + ++ DFG L+ D
Sbjct: 140 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 196
Query: 198 VTTRVKGTLGYLAPEYAMLGKA-SESCDVYSFGILLLELASGKKPIEKVNSAIK 250
V T GT Y PE+ + S V+S GILL ++ G P E I+
Sbjct: 197 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 250
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 139 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 190
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 143 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 194
Query: 209 LAPEYAMLG--KASESCDVYSFGILLLELASGK 239
APE ML +++ D++S G ++ EL +G+
Sbjct: 195 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 157 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 208
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 160 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 211
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 193
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 157 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 208
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 156 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 207
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 148 AEGIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHVT-TRVK 203
E I YLH + +I HRD+K N+L + + ++ DFGFAK + +H + T
Sbjct: 141 GEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPC 194
Query: 204 GTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
T Y+APE K +SCD++S G+++ L G P
Sbjct: 195 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 233
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFAV 83
KE + + LG GGFGSVY G ++ D +A+K R+ W +
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 84 EVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
EV +L +V G+ G RL+ + P+ + R +
Sbjct: 104 EVVLLKKVS-------SGF--SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGAL 154
Query: 144 AIGSAEGIVYLHHHATPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGATH 197
A + A H ++HRDIK N+L+D + + ++ DFG L+ D
Sbjct: 155 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 211
Query: 198 VTTRVKGTLGYLAPEYAMLGKA-SESCDVYSFGILLLELASGKKPIEKVNSAIK 250
V T GT Y PE+ + S V+S GILL ++ G P E I+
Sbjct: 212 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 265
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKA---QVADFGFAKLIPDGATHVTTRVKGT 205
E + ++H H I+HRD+K N+LL + K ++ADFG A + G GT
Sbjct: 141 ESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGEQQAWFGFAGT 196
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI-----EKVNSAIKRTITDWALP 259
GYL+PE + D+++ G++L L G P K+ IK D+ P
Sbjct: 197 PGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSP 255
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 143 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 194
Query: 209 LAPEYAMLG--KASESCDVYSFGILLLELASGK 239
APE ML +++ D++S G ++ EL +G+
Sbjct: 195 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 156 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 207
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 134 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 185
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 134 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 185
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 94/237 (39%), Gaps = 26/237 (10%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFAV 83
KE + + LG GGFGSVY G ++ D +A+K R+ W +
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 84 EVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
EV +L +V G+ G RL+ + P+ + R +
Sbjct: 104 EVVLLKKVS-------SGF--SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGAL 154
Query: 144 AIGSAEGIVYLHHHATPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGATH 197
A + A H ++HRDIK N+L+D + + ++ DFG L+ D
Sbjct: 155 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 211
Query: 198 VTTRVKGTLGYLAPEYAMLGKA-SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
V T GT Y PE+ + S V+S GILL ++ G P E I+ +
Sbjct: 212 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQV 268
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 71/170 (41%), Gaps = 36/170 (21%)
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI--------------PDG 194
E + Y+H IIHRD+K N+ +D ++ DFG AK + P
Sbjct: 127 EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 195 ATHVTTRVKGTLGYLAPEYA-MLGKASESCDVYSFGILLLELA-SGKKPIEKVNSAIKRT 252
+ ++T+ + GT Y+A E G +E D+YS GI+ E+ +E+VN K
Sbjct: 184 SDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLR 242
Query: 253 ITDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRP 302
P P + N ++ E K ++ L H P KRP
Sbjct: 243 SVSIEFP------------PDFDDNKMKVEKK---IIRLLIDHD-PNKRP 276
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 133 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 184
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 71/170 (41%), Gaps = 36/170 (21%)
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI--------------PDG 194
E + Y+H IIHRD+K N+ +D ++ DFG AK + P
Sbjct: 127 EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 195 ATHVTTRVKGTLGYLAPEYA-MLGKASESCDVYSFGILLLELA-SGKKPIEKVNSAIKRT 252
+ ++T+ + GT Y+A E G +E D+YS GI+ E+ +E+VN K
Sbjct: 184 SDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLR 242
Query: 253 ITDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRP 302
P P + N ++ E K ++ L H P KRP
Sbjct: 243 SVSIEFP------------PDFDDNKMKVEKK---IIRLLIDHD-PNKRP 276
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 133 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 184
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 90/215 (41%), Gaps = 19/215 (8%)
Query: 35 SATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRH 93
S + ++ +LG G FG V+ + G K + + E+ I+ ++ H
Sbjct: 48 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHH 107
Query: 94 KNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXEC---LLNWNRRMDIAIGSAEG 150
L++L + E +++ +++ ++N+ R+ + EG
Sbjct: 108 PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQ------ACEG 161
Query: 151 IVYLHHHATPHIIHRDIKASNVLLDAD--FKAQVADFGFA-KLIPDGATHVTTRVKGTLG 207
+ ++H H+ I+H DIK N++ + ++ DFG A KL PD VTT T
Sbjct: 162 LKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAE 215
Query: 208 YLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
+ APE D+++ G+L L SG P
Sbjct: 216 FAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPF 250
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 94/237 (39%), Gaps = 26/237 (10%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFAV 83
KE + + LG GGFGSVY G ++ D +A+K R+ W +
Sbjct: 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 95
Query: 84 EVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
EV +L +V G+ G RL+ + P+ + R +
Sbjct: 96 EVVLLKKVS-------SGF--SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGAL 146
Query: 144 AIGSAEGIVYLHHHATPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGATH 197
A + A H ++HRDIK N+L+D + + ++ DFG L+ D
Sbjct: 147 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 203
Query: 198 VTTRVKGTLGYLAPEYAMLGKA-SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
V T GT Y PE+ + S V+S GILL ++ G P E I+ +
Sbjct: 204 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQV 260
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 30/172 (17%)
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFA-KLIPDGATHVTTRVKGTLG 207
E + +H H I+H D+K +N L+ D ++ DFG A ++ PD V GT+
Sbjct: 138 EAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVN 193
Query: 208 YLAPEYAMLGKASE-----------SCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
Y+ PE +S DV+S G +L + GK P +++ + I
Sbjct: 194 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS------ 247
Query: 257 ALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
K + DP F + K + V C P++R ++ E+L
Sbjct: 248 --------KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SNV ++ D + ++ DFG A+ + T +V TR Y
Sbjct: 135 GLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WY 186
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL GK
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 135 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 186
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 91/227 (40%), Gaps = 26/227 (11%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFAV 83
KE + + LG GGFGSVY G ++ D +A+K R+ W +
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 84 EVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
EV +L +V G+ G RL+ + P+ + R +
Sbjct: 90 EVVLLKKVS-------SGF--SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGAL 140
Query: 144 AIGSAEGIVYLHHHATPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGATH 197
A + A H ++HRDIK N+L+D + + ++ DFG L+ D
Sbjct: 141 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 197
Query: 198 VTTRVKGTLGYLAPEYAMLGKA-SESCDVYSFGILLLELASGKKPIE 243
V T GT Y PE+ + S V+S GILL ++ G P E
Sbjct: 198 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SNV ++ D + ++ DFG A+ + T +V TR Y
Sbjct: 143 GLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WY 194
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL GK
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 12/93 (12%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SNV ++ D + ++ DFG A+ + T +V TR Y
Sbjct: 143 GLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WY 194
Query: 209 LAPEYAMLG--KASESCDVYSFGILLLELASGK 239
APE ML +++ D++S G ++ EL GK
Sbjct: 195 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 91/227 (40%), Gaps = 26/227 (11%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFAV 83
KE + + LG GGFGSVY G ++ D +A+K R+ W +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 84 EVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
EV +L +V G+ G RL+ + P+ + R +
Sbjct: 89 EVVLLKKVS-------SGF--SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGAL 139
Query: 144 AIGSAEGIVYLHHHATPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGATH 197
A + A H ++HRDIK N+L+D + + ++ DFG L+ D
Sbjct: 140 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 196
Query: 198 VTTRVKGTLGYLAPEYAMLGKA-SESCDVYSFGILLLELASGKKPIE 243
V T GT Y PE+ + S V+S GILL ++ G P E
Sbjct: 197 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 91/227 (40%), Gaps = 26/227 (11%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFAV 83
KE + + LG GGFGSVY G ++ D +A+K R+ W +
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 84 EVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
EV +L +V G+ G RL+ + P+ + R +
Sbjct: 90 EVVLLKKVS-------SGF--SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGAL 140
Query: 144 AIGSAEGIVYLHHHATPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGATH 197
A + A H ++HRDIK N+L+D + + ++ DFG L+ D
Sbjct: 141 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 197
Query: 198 VTTRVKGTLGYLAPEYAMLGKA-SESCDVYSFGILLLELASGKKPIE 243
V T GT Y PE+ + S V+S GILL ++ G P E
Sbjct: 198 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 133 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 184
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 91/227 (40%), Gaps = 26/227 (11%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFAV 83
KE + + LG GGFGSVY G ++ D +A+K R+ W +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 84 EVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
EV +L +V G+ G RL+ + P+ + R +
Sbjct: 89 EVVLLKKVS-------SGF--SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGAL 139
Query: 144 AIGSAEGIVYLHHHATPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGATH 197
A + A H ++HRDIK N+L+D + + ++ DFG L+ D
Sbjct: 140 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 196
Query: 198 VTTRVKGTLGYLAPEYAMLGKA-SESCDVYSFGILLLELASGKKPIE 243
V T GT Y PE+ + S V+S GILL ++ G P E
Sbjct: 197 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFAV 83
KE + + LG GGFGSVY G ++ D +A+K R+ W +
Sbjct: 49 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 108
Query: 84 EVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
EV +L +V G+ G RL+ + P+ + R +
Sbjct: 109 EVVLLKKVS-------SGF--SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGAL 159
Query: 144 AIGSAEGIVYLHHHATPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGATH 197
A + A H ++HRDIK N+L+D + + ++ DFG L+ D
Sbjct: 160 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 216
Query: 198 VTTRVKGTLGYLAPEYAMLGKA-SESCDVYSFGILLLELASGKKPIEKVNSAIK 250
V T GT Y PE+ + S V+S GILL ++ G P E I+
Sbjct: 217 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 270
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 91/227 (40%), Gaps = 26/227 (11%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFAV 83
KE + + LG GGFGSVY G ++ D +A+K R+ W +
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 84 EVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
EV +L +V G+ G RL+ + P+ + R +
Sbjct: 90 EVVLLKKVS-------SGF--SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGAL 140
Query: 144 AIGSAEGIVYLHHHATPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGATH 197
A + A H ++HRDIK N+L+D + + ++ DFG L+ D
Sbjct: 141 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 197
Query: 198 VTTRVKGTLGYLAPEYAMLGKA-SESCDVYSFGILLLELASGKKPIE 243
V T GT Y PE+ + S V+S GILL ++ G P E
Sbjct: 198 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 91/227 (40%), Gaps = 26/227 (11%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFAV 83
KE + + LG GGFGSVY G ++ D +A+K R+ W +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 84 EVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
EV +L +V G+ G RL+ + P+ + R +
Sbjct: 89 EVVLLKKVS-------SGF--SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGAL 139
Query: 144 AIGSAEGIVYLHHHATPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGATH 197
A + A H ++HRDIK N+L+D + + ++ DFG L+ D
Sbjct: 140 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 196
Query: 198 VTTRVKGTLGYLAPEYAMLGKA-SESCDVYSFGILLLELASGKKPIE 243
V T GT Y PE+ + S V+S GILL ++ G P E
Sbjct: 197 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 91/227 (40%), Gaps = 26/227 (11%)
Query: 31 KELHSATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFAV 83
KE + + LG GGFGSVY G ++ D +A+K R+ W +
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 84 EVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
EV +L +V G+ G RL+ + P+ + R +
Sbjct: 90 EVVLLKKVS-------SGF--SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGAL 140
Query: 144 AIGSAEGIVYLHHHATPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGATH 197
A + A H ++HRDIK N+L+D + + ++ DFG L+ D
Sbjct: 141 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 197
Query: 198 VTTRVKGTLGYLAPEYAMLGKA-SESCDVYSFGILLLELASGKKPIE 243
V T GT Y PE+ + S V+S GILL ++ G P E
Sbjct: 198 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 101/236 (42%), Gaps = 36/236 (15%)
Query: 37 TNNFNYDNKLGEGGFGSVYWGQL--WDGSQIAVKRLK-------VWSNKAEM-EFAVEVE 86
+ ++ + LG G FG V W + ++ VK +K W ++ + +E+
Sbjct: 23 SQKYSTMSPLGSGAFGFV-WTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIA 81
Query: 87 ILARVRHKNLLS-LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAI 145
IL+RV H N++ L + +G +L++ + ++ + R+D +
Sbjct: 82 ILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLF----------AFIDRHPRLDEPL 131
Query: 146 GS------AEGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVT 199
S + YL IIHRDIK N+++ DF ++ DFG A + G T
Sbjct: 132 ASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT 188
Query: 200 TRVKGTLGYLAPEYAMLGKA--SESCDVYSFGILLLELASGKKPIEKVNSAIKRTI 253
GT+ Y APE ++G +++S G+ L L + P ++ ++ I
Sbjct: 189 --FCGTIEYCAPE-VLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAI 241
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 89/219 (40%), Gaps = 26/219 (11%)
Query: 46 LGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFAVEVEILARVRHKNLLS 98
LG GGFGSVY G ++ D +A+K R+ W +EV +L +V
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS------ 68
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHA 158
G+ G RL+ + P+ + R + A + A
Sbjct: 69 -SGF--SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 125
Query: 159 TPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
H ++HRDIK N+L+D + + ++ DFG L+ D V T GT Y PE
Sbjct: 126 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 182
Query: 213 YAMLGKA-SESCDVYSFGILLLELASGKKPIEKVNSAIK 250
+ + S V+S GILL ++ G P E I+
Sbjct: 183 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 221
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 100/245 (40%), Gaps = 48/245 (19%)
Query: 37 TNNFNYDNKLGEGGFGSVYW--GQLWDGSQ--IAVKRLKVWSNKAEMEFAVEVEILARVR 92
+N F ++K+GEG F SVY QL G + IA+K L S+ + A E++ L
Sbjct: 20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH--PIRIAAELQCLTVAG 77
Query: 93 HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIV 152
++ + YC + +++ MP L++ + + + +
Sbjct: 78 GQDNVMGVKYCFRKNDHVVI--AMPYLEHESFLDILNS----LSFQEVREYMLNLFKALK 131
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKA-QVADFGFAKLIPDGATHVTTRVK-------- 203
+H I+HRD+K SN L + K + DFG A+ D + V+
Sbjct: 132 RIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERC 188
Query: 204 -------------------GTLGYLAPEYAMLGKA---SESCDVYSFGILLLELASGKKP 241
GT G+ APE +L K + + D++S G++ L L SG+ P
Sbjct: 189 SQNKCSICLSRRQQVAPRAGTPGFRAPE--VLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246
Query: 242 IEKVN 246
K +
Sbjct: 247 FYKAS 251
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 93/226 (41%), Gaps = 50/226 (22%)
Query: 84 EVEILARVRHKNLLSLRG--YCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRM 141
E+++L R+RHKN++ L Y E Q+ +V +Y C+ +
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEY-----------------CVCGMQEML 98
Query: 142 D------IAIGSA--------EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGF 187
D + A +G+ YLH I+H+DIK N+LL +++ G
Sbjct: 99 DSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGV 155
Query: 188 AKLIPDGATHVTTRV-KGTLGYLAPEYA--MLGKASESCDVYSFGILLLELASGKKPIEK 244
A+ + A T R +G+ + PE A + + D++S G+ L + +G P E
Sbjct: 156 AEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG 215
Query: 245 VNSAIKRTITD-----WALPLACERKFSELADPRLNGNFVEEELKR 285
N I + + +A+P C S+L L G E KR
Sbjct: 216 DN--IYKLFENIGKGSYAIPGDCGPPLSDL----LKGMLEYEPAKR 255
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 89/219 (40%), Gaps = 26/219 (11%)
Query: 46 LGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFAVEVEILARVRHKNLLS 98
LG GGFGSVY G ++ D +A+K R+ W +EV +L +V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS------ 65
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHA 158
G+ G RL+ + P+ + R + A + A
Sbjct: 66 -SGF--SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 122
Query: 159 TPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
H ++HRDIK N+L+D + + ++ DFG L+ D V T GT Y PE
Sbjct: 123 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 179
Query: 213 YAMLGKA-SESCDVYSFGILLLELASGKKPIEKVNSAIK 250
+ + S V+S GILL ++ G P E I+
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 218
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 44/223 (19%)
Query: 46 LGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFAVEVEILARVR----HK 94
LG+GGFG+V+ G +L D Q+A+K R+ WS ++ + +EV +L +V H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 95 NLLSLRGYCAEGQERLIV-----------YDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
++ L + E QE ++ +DY+ C
Sbjct: 99 GVIRLLDW-FETQEGFMLVLERPLPAQDLFDYI----TEKGPLGEGPSRCFFG------- 146
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFK-AQVADFGFAKLIPDGATHVTTRV 202
+ + + H + ++HRDIK N+L+D A++ DFG L+ D T
Sbjct: 147 -----QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHD---EPYTDF 198
Query: 203 KGTLGYLAPEYAMLGKA-SESCDVYSFGILLLELASGKKPIEK 244
GT Y PE+ + + V+S GILL ++ G P E+
Sbjct: 199 DGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER 241
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 87/217 (40%), Gaps = 20/217 (9%)
Query: 35 SATNNFNYDNKLGEGGFGSVY------WGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEIL 88
S T+ + +LG+G F V GQ + I K+L S + + E I
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL---SARDHQKLEREARIC 57
Query: 89 ARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSA 148
++H N++ L +E +V+D + + D +
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-------EYYSEADASHCIQ 110
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKA---QVADFGFAKLIPDGATHVTTRVKGT 205
+ + ++H I+HRD+K N+LL + K ++ADFG A + G GT
Sbjct: 111 QILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV-QGDQQAWFGFAGT 169
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
GYL+PE + D+++ G++L L G P
Sbjct: 170 PGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 12/93 (12%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T +V TR Y
Sbjct: 166 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 217
Query: 209 LAPEYAMLG--KASESCDVYSFGILLLELASGK 239
APE ML + + D++S G ++ EL +G+
Sbjct: 218 RAPE-IMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ D+G A+ D T +V TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----WY 188
Query: 209 LAPEYAMLG--KASESCDVYSFGILLLELASGK 239
APE ML +++ D++S G ++ EL +G+
Sbjct: 189 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 30/172 (17%)
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFA-KLIPDGATHVTTRVKGTLG 207
E + +H H I+H D+K +N L+ D ++ DFG A ++ PD + V G +
Sbjct: 166 EAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVN 221
Query: 208 YLAPEYAMLGKASE-----------SCDVYSFGILLLELASGKKPIEKVNSAIKRTITDW 256
Y+ PE +S DV+S G +L + GK P +++ + I
Sbjct: 222 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS------ 275
Query: 257 ALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEKRPTMLEVL 308
K + DP F + K + V C P++R ++ E+L
Sbjct: 276 --------KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 87/217 (40%), Gaps = 20/217 (9%)
Query: 35 SATNNFNYDNKLGEGGFGSVY------WGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEIL 88
S T+ + +LG+G F V GQ + I K+L S + + E I
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL---SARDHQKLEREARIC 57
Query: 89 ARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSA 148
++H N++ L +E +V+D + + D +
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-------EYYSEADASHCIQ 110
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKA---QVADFGFAKLIPDGATHVTTRVKGT 205
+ + ++H I+HRD+K N+LL + K ++ADFG A + G GT
Sbjct: 111 QILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV-QGDQQAWFGFAGT 169
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
GYL+PE + D+++ G++L L G P
Sbjct: 170 PGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 89/219 (40%), Gaps = 26/219 (11%)
Query: 46 LGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFAVEVEILARVRHKNLLS 98
LG GGFGSVY G ++ D +A+K R+ W +EV +L +V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS------ 65
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHA 158
G+ G RL+ + P+ + R + A + A
Sbjct: 66 -SGF--SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 122
Query: 159 TPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
H ++HRDIK N+L+D + + ++ DFG L+ D V T GT Y PE
Sbjct: 123 VRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 179
Query: 213 YAMLGKA-SESCDVYSFGILLLELASGKKPIEKVNSAIK 250
+ + S V+S GILL ++ G P E I+
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 218
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 101/250 (40%), Gaps = 44/250 (17%)
Query: 26 RIFSLKELHSATNNFNYDNK-LGEGGFGSVYWGQLWDGSQIAVKRLKV-WSNKAEMEFAV 83
RI ++ + N K LG G G+V + + G +AVKR+ + + + A ME +
Sbjct: 2 RIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKL 61
Query: 84 EVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRM-- 141
E H N++ R YC+E +R + Y+ + + + N ++
Sbjct: 62 LTE---SDDHPNVI--RYYCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQK 113
Query: 142 -----DIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA-------------DFKAQVA 183
+ A G+ +LH + IIHRD+K N+L+ + + ++
Sbjct: 114 EYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170
Query: 184 DFGFAKLIPDGATHVTTRVK---GTLGYLAPE-------YAMLGKASESCDVYSFG-ILL 232
DFG K + G + GT G+ APE + + S D++S G +
Sbjct: 171 DFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY 230
Query: 233 LELASGKKPI 242
L+ GK P
Sbjct: 231 YILSKGKHPF 240
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D T V TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR-----WY 188
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYL 209
GI +LH + IIHRD+K SN+++ +D ++ DFG A+ G + + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRYYR 192
Query: 210 APEYAMLGKASESCDVYSFGILLLELASGK 239
APE + E+ D++S G ++ E+ K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 142 DIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDA---DFKAQVADFGFAKLIPDGATHV 198
+I E I YLH + +I HRD+K N+L + + ++ DFGFAK + +H
Sbjct: 165 EIXKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHN 218
Query: 199 T-TRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
+ T T Y+APE K +SCD +S G++ L G P
Sbjct: 219 SLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPF 263
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG + D T +V TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----WY 188
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 94/211 (44%), Gaps = 27/211 (12%)
Query: 46 LGEGGFGSVYWGQL-WDGSQIAVKRLK-----VWSNKAEMEFAVEVEILARVRHKNLLSL 99
+G G +G V + G Q+A+K++ V + K + E++IL +H N++++
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR---ELKILKHFKHDNIIAI 118
Query: 100 RGYC------AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
+ E + +V D M + L G+ Y
Sbjct: 119 KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQP-----LTLEHVRYFLYQLLRGLKY 173
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI---PDGATHVTTRVKGTLGYLA 210
+H + +IHRD+K SN+L++ + + ++ DFG A+ + P + T T Y A
Sbjct: 174 MH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 230
Query: 211 PEYAM-LGKASESCDVYSFGILLLELASGKK 240
PE + L + +++ D++S G + E+ + ++
Sbjct: 231 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 87/212 (41%), Gaps = 26/212 (12%)
Query: 46 LGEGGFGSVYWG-QLWDGSQIAVK-----RLKVWSNKAE-MEFAVEVEILARVRHKNLLS 98
LG GGFGSVY G ++ D +A+K R+ W +EV +L +V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS------ 65
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHA 158
G+ G RL+ + P+ + R + A + A
Sbjct: 66 -SGF--SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 122
Query: 159 TPH-----IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPE 212
H ++HRDIK N+L+D + + ++ DFG L+ D V T GT Y PE
Sbjct: 123 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 179
Query: 213 YAMLGKA-SESCDVYSFGILLLELASGKKPIE 243
+ + S V+S GILL ++ G P E
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPD-GATHVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D A V TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WY 188
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPD-GATHVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D A V TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WY 188
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 94/242 (38%), Gaps = 31/242 (12%)
Query: 35 SATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRL--KVWSNKAEMEFAVEVEILARV 91
S T+ + +G+G F V +L G + A K + K S + + E I +
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMP------NXXXXXXXXXXXXXECLLNWNRRMDIAI 145
+H N++ L +E +V+D + + C+
Sbjct: 61 KHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQ--------- 111
Query: 146 GSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKA---QVADFGFAKLIPDGATHVTTRV 202
E +++ H ++HRD+K N+LL + K ++ADFG A + G
Sbjct: 112 -ILEAVLHCHQMG---VVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGDQQAWFGF 166
Query: 203 KGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI-----EKVNSAIKRTITDWA 257
GT GYL+PE + D+++ G++L L G P K+ IK D+
Sbjct: 167 AGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFP 226
Query: 258 LP 259
P
Sbjct: 227 SP 228
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 12/93 (12%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D +V TR Y
Sbjct: 160 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----WY 211
Query: 209 LAPEYAMLG--KASESCDVYSFGILLLELASGK 239
APE ML +++ D++S G ++ EL +G+
Sbjct: 212 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 27/211 (12%)
Query: 46 LGEGGFGSVYWGQL-WDGSQIAVKRLK-----VWSNKAEMEFAVEVEILARVRHKNLLS- 98
+G G +G V + G Q+A+K++ V + K + E++IL +H N+++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR---ELKILKHFKHDNIIAI 119
Query: 99 ---LRGYCAEGQER--LIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
LR G+ + +V D M + L G+ Y
Sbjct: 120 KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQP-----LTLEHVRYFLYQLLRGLKY 174
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI---PDGATHVTTRVKGTLGYLA 210
+H + +IHRD+K SN+L++ + + ++ DFG A+ + P + T T Y A
Sbjct: 175 MH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 231
Query: 211 PEYAM-LGKASESCDVYSFGILLLELASGKK 240
PE + L + +++ D++S G + E+ + ++
Sbjct: 232 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 162 IIHRDIKASNVLLDADF-KAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKA- 219
++HRDIK N+L+D + + ++ DFG L+ D V T GT Y PE+ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 234
Query: 220 SESCDVYSFGILLLELASGKKPIEKVNSAIK 250
S V+S GILL ++ G P E I+
Sbjct: 235 GRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 265
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPD-GATHVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ D A V TR Y
Sbjct: 133 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WY 184
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYL 209
GI +LH + IIHRD+K SN+++ +D ++ DFG A+ G + + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRYYR 192
Query: 210 APEYAMLGKASESCDVYSFGILLLELASGK 239
APE + E+ D++S G ++ E+ K
Sbjct: 193 APEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 84/213 (39%), Gaps = 32/213 (15%)
Query: 45 KLGEGGFG------SVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLS 98
+LG+G F V GQ + I K+L S + + E I ++H N++
Sbjct: 29 ELGKGAFSVVRRCVKVLAGQEYAAKIINTKKL---SARDHQKLEREARICRLLKHPNIVR 85
Query: 99 LRGYCAEGQERLIVYDYMP------NXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIV 152
L +E +++D + + C+ E ++
Sbjct: 86 LHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQ----------ILEAVL 135
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKA---QVADFGFAKLIPDGATHVTTRVKGTLGYL 209
+ H ++HRD+K N+LL + K ++ADFG A + +G GT GYL
Sbjct: 136 HCHQMG---VVHRDLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFGFAGTPGYL 191
Query: 210 APEYAMLGKASESCDVYSFGILLLELASGKKPI 242
+PE + D+++ G++L L G P
Sbjct: 192 SPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 92/220 (41%), Gaps = 41/220 (18%)
Query: 46 LGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCA 104
LG+G FG V + D A+K+++ K + EV +LA + H+ ++ R Y A
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVXLLASLNHQYVV--RYYAA 70
Query: 105 EGQERLIVYDYMPNXXXXXXXXXXXXXE-C-------LL---NWNRRMD----IAIGSAE 149
+ R V P E C L+ N N++ D + E
Sbjct: 71 WLERRNFV---KPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLI--------------PDGA 195
+ Y+H IIHR++K N+ +D ++ DFG AK + P +
Sbjct: 128 ALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 196 THVTTRVKGTLGYLAPEYA-MLGKASESCDVYSFGILLLE 234
++T+ + GT Y+A E G +E D YS GI+ E
Sbjct: 185 DNLTSAI-GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 19/223 (8%)
Query: 39 NFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLL 97
++ + KLGEGGF V + L DG A+KR+ + E E ++ H N+L
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNIL 89
Query: 98 SLRGYC----AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVY 153
L YC E ++ + L ++ + + +G G+
Sbjct: 90 RLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149
Query: 154 LHHHATPHIIHRDIKASNVLLDADFKAQVADFGF---AKLIPDGATHVTT-----RVKGT 205
+H HRD+K +N+LL + + + D G A + +G+ T + T
Sbjct: 150 IHAKGYA---HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCT 206
Query: 206 LGYLAPEYAMLGK---ASESCDVYSFGILLLELASGKKPIEKV 245
+ Y APE + E DV+S G +L + G+ P + V
Sbjct: 207 ISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMV 249
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 86/221 (38%), Gaps = 32/221 (14%)
Query: 37 TNNFNYDNKLGEGGFG------SVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILAR 90
T + +LG+G F V GQ + I K+L S + + E I
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL---SARDHQKLEREARICRL 66
Query: 91 VRHKNLLSLRGYCAEGQERLIVYDYMP------NXXXXXXXXXXXXXECLLNWNRRMDIA 144
++H N++ L +E +++D + + C+
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQ-------- 118
Query: 145 IGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKA---QVADFGFAKLIPDGATHVTTR 201
E +++ H ++HR++K N+LL + K ++ADFG A + +G
Sbjct: 119 --ILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFG 172
Query: 202 VKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
GT GYL+PE + D+++ G++L L G P
Sbjct: 173 FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ FG A+ D T +V TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----WY 188
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 14/94 (14%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLG-- 207
G+ Y+H + IIHRD+K SN+ ++ D + ++ DFG A+ H + G +
Sbjct: 157 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGXVATR 206
Query: 208 -YLAPEYAM-LGKASESCDVYSFGILLLELASGK 239
Y APE + +++ D++S G ++ EL +G+
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 12/93 (12%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ DF A+ D T +V TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----WY 188
Query: 209 LAPEYAMLG--KASESCDVYSFGILLLELASGK 239
APE ML +++ D++S G ++ EL +G+
Sbjct: 189 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ D G A+ D T +V TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----WY 188
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 12/93 (12%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ D G A+ D T +V TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----WY 188
Query: 209 LAPEYAMLG--KASESCDVYSFGILLLELASGK 239
APE ML +++ D++S G ++ EL +G+
Sbjct: 189 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 98/232 (42%), Gaps = 34/232 (14%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHK-N 95
N + K+G G FG +Y G + G ++A+K V + ++ +E +I ++
Sbjct: 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLH--IESKIYKMMQGGVG 66
Query: 96 LLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRR-------MDIAIGSA 148
+ ++R AEG ++V + + E L N+ R + +A
Sbjct: 67 IPTIRWCGAEGDYNVMVMELL-----------GPSLEDLFNFCSRKFSLKTVLLLADQMI 115
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQ---VADFGFAKLIPDGAT--HVTTR-- 201
I Y+H + + IHRD+K N L+ K + DFG AK D T H+ R
Sbjct: 116 SRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 172
Query: 202 --VKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKR 251
+ GT Y + + + S D+ S G +L+ G P + + +A KR
Sbjct: 173 KNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR 224
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 98/232 (42%), Gaps = 34/232 (14%)
Query: 38 NNFNYDNKLGEGGFGSVYWGQ-LWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHK-N 95
N + K+G G FG +Y G + G ++A+K V + ++ +E +I ++
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLH--IESKIYKMMQGGVG 64
Query: 96 LLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRR-------MDIAIGSA 148
+ ++R AEG ++V + + E L N+ R + +A
Sbjct: 65 IPTIRWCGAEGDYNVMVMELL-----------GPSLEDLFNFCSRKFSLKTVLLLADQMI 113
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQ---VADFGFAKLIPDGAT--HVTTR-- 201
I Y+H + + IHRD+K N L+ K + DFG AK D T H+ R
Sbjct: 114 SRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 170
Query: 202 --VKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKR 251
+ GT Y + + + S D+ S G +L+ G P + + +A KR
Sbjct: 171 KNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR 222
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 98/231 (42%), Gaps = 32/231 (13%)
Query: 38 NNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNL 96
N F K+G G FG +Y G + ++A+K V + ++ + ++ + + +
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQG-GTGI 65
Query: 97 LSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRR---MDIAIGSAEGIV- 152
++R + EG ++V D + E L N+ R + + A+ ++
Sbjct: 66 PNVRWFGVEGDYNVLVMDLL-----------GPSLEDLFNFCSRKLSLKTVLMLADQMIN 114
Query: 153 ---YLHHHATPHIIHRDIKASNVLLDADFKAQ---VADFGFAKLIPDGAT--HVTTR--- 201
++H + +HRDIK N L+ +A + DFG AK D +T H+ R
Sbjct: 115 RVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENK 171
Query: 202 -VKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKR 251
+ GT Y + + + S D+ S G +L+ G P + + + K+
Sbjct: 172 NLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK 222
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGAT-HVTTRVKGTLGY 208
G+ Y+H + IIHRD+K SN+ ++ D + ++ D G A+ D T +V TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----WY 188
Query: 209 LAPEYAM-LGKASESCDVYSFGILLLELASGK 239
APE + +++ D++S G ++ EL +G+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 38/223 (17%)
Query: 40 FNYDNKLGEGGFGSVY-WGQLWDGSQIAVKRLKVWSNKAEM------EFAVEVEILARVR 92
++ +LG G F V + G + A K +K ++A E EV IL +V
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 93 HKNLLSLRGYCAEGQERLIV---------YDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
H N+++L + +++ +D++ + +L+
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD------- 126
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNV-LLDADFKA---QVADFGFAKLIPDGATHVT 199
G+ YLH T I H D+K N+ LLD + ++ DFG A I DG
Sbjct: 127 ------GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF-- 175
Query: 200 TRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
+ GT ++APE D++S G++ L SG P
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 19/218 (8%)
Query: 40 FNYDN-KLGEGGFGSVYWGQLWDGSQIAVKRLK-VWSNKAEMEFAVEVEILARVRHKNLL 97
F Y+ K+G G +G VY + DG LK + M E+ +L ++H N++
Sbjct: 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVI 81
Query: 98 SLRGYCAEGQER--LIVYDY----MPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
SL+ +R +++DY + + L + +GI
Sbjct: 82 SLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGI 141
Query: 152 VYLHHHATPHIIHRDIKASNVLLDAD----FKAQVADFGFAKLI--PDGATHVTTRVKGT 205
YLH + ++HRD+K +N+L+ + + ++AD GFA+L P V T
Sbjct: 142 HYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVT 198
Query: 206 LGYLAPEYAMLGK-ASESCDVYSFGILLLELASGKKPI 242
Y APE + + +++ D+++ G + EL + +PI
Sbjct: 199 FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS-EPI 235
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 92/203 (45%), Gaps = 21/203 (10%)
Query: 46 LGEGGFGSVYWG-QLWDGSQIAVKRL------KVWSNKAEMEFAVEVEILARVRHKNLLS 98
+G G +G+V G+++A+K+L ++++ +A E + +L +RH+N++
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRE----LRLLKHMRHENVIG 88
Query: 99 LRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHA 158
L + D+ L +R + +G+ Y+H
Sbjct: 89 LLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG 148
Query: 159 TPHIIHRDIKASNVLLDADFKAQVADFGFAKLI-PDGATHVTTRVKGTLGYLAPEYAM-L 216
IIHRD+K N+ ++ D + ++ DFG A+ + V TR Y APE +
Sbjct: 149 ---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR-----WYRAPEVILNW 200
Query: 217 GKASESCDVYSFGILLLELASGK 239
+ +++ D++S G ++ E+ +GK
Sbjct: 201 MRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 13/173 (7%)
Query: 75 NKAEMEFAVEVEILARV-RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXEC 133
+K++ + E+EIL R +H N+++L+ +G+ +V + +
Sbjct: 56 DKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILR----QK 111
Query: 134 LLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADF----KAQVADFGFAK 189
+ + + + YLH ++HRD+K SN+L + ++ DFGFAK
Sbjct: 112 FFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK 168
Query: 190 LIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
+ + T T ++APE +CD++S G+LL +G P
Sbjct: 169 QLRAENGLLXTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLL---DADFKAQVADFGFAKLIPDGATHVTTRVKGT 205
E + Y H + +IIHRD+K NVLL + ++ DFG A + + RV GT
Sbjct: 141 EALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV-GT 196
Query: 206 LGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
++APE + DV+ G++L L SG P
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 46 LGEGGFGSVYWG-QLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVR-HKNLLSLRGYC 103
LGEG + V L +G + AVK ++ + + EVE L + + +KN+L L +
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFF 80
Query: 104 AEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLHHHATPHII 163
+ +V++ + N + A + +LH T I
Sbjct: 81 EDDTRFYLVFEKLQGGSILAHIQKQKH----FNEREASRVVRDVAAALDFLH---TKGIA 133
Query: 164 HRDIKASNVLLDADFK---AQVADF--GFAKLIPDGATHVT----TRVKGTLGYLAPEY- 213
HRD+K N+L ++ K ++ DF G + + T +T T G+ Y+APE
Sbjct: 134 HRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVV 193
Query: 214 -AMLGKAS---ESCDVYSFGILLLELASGKKPI 242
+A+ + CD++S G++L + SG P
Sbjct: 194 EVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 151 IVYLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTLGYLA 210
++ L H + ++H D+K +N+ L + ++ DFG L+ G +G Y+A
Sbjct: 167 LLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMA 224
Query: 211 PEYAMLGKASESCDVYSFGILLLELA 236
PE + G + DV+S G+ +LE+A
Sbjct: 225 PEL-LQGSYGTAADVFSLGLTILEVA 249
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 46 LGEGGFGSVYWG-QLWDGSQIAVKRL------KVWSNKAEMEFAVEVEILARVRHKNLLS 98
+G G +GSV G ++A+K+L ++++ +A E +L ++H+N++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELL----LLKHMQHENVIG 87
Query: 99 LRGYCAEGQERLIVYDY---MPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
L YD+ MP + + + +G+ Y+H
Sbjct: 88 LLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLK----FSEEKIQYLVYQMLKGLKYIH 143
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---TLGYLAPE 212
+ ++HRD+K N+ ++ D + ++ DFG A+ H + G T Y APE
Sbjct: 144 ---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVVTRWYRAPE 193
Query: 213 YAM-LGKASESCDVYSFGILLLELASGK 239
+ +++ D++S G ++ E+ +GK
Sbjct: 194 VILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 163 IHRDIKASNVLLDADFKAQVADFGFA-KLIPDGATHVTTRVKGTLGYLAPEY-------A 214
+HRDIK N+LLD ++ADFG KL DG V GT YL+PE
Sbjct: 184 VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV-GTPDYLSPEILQAVGGGP 242
Query: 215 MLGKASESCDVYSFGILLLELASGKKPIEKVNSA 248
G CD ++ G+ E+ G+ P ++A
Sbjct: 243 GTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA 276
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 97/230 (42%), Gaps = 31/230 (13%)
Query: 35 SATNNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLKVWSNKAEMEFAV--EVEILARV 91
++ + + KLGEG +G VY +A+KR+++ + + EV +L +
Sbjct: 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKEL 90
Query: 92 RHKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGI 151
+H+N++ L+ ++++Y N ++ D+++ +
Sbjct: 91 QHRNIIELKSVIHHNHRLHLIFEYAENDLKKYM-------------DKNPDVSMRVIKSF 137
Query: 152 VY-----LHHHATPHIIHRDIKASNVLLDADFKAQ-----VADFGFAKLIPDGATHVTTR 201
+Y ++ + +HRD+K N+LL ++ + DFG A+ T
Sbjct: 138 LYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHE 197
Query: 202 VKGTLGYLAPEYAMLGKA--SESCDVYSFGILLLELASGKKPIEKVNSAI 249
+ TL Y PE +LG S S D++S + E+ K P+ +S I
Sbjct: 198 II-TLWYRPPE-ILLGSRHYSTSVDIWSIACIWAEMLM-KTPLFPGDSEI 244
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 46 LGEGGFGSVYWG-QLWDGSQIAVKRL------KVWSNKAEMEFAVEVEILARVRHKNLLS 98
+G G +GSV G ++A+K+L ++++ +A E +L ++H+N++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELL----LLKHMQHENVIG 105
Query: 99 LRGYCAEGQERLIVYDY---MPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIVYLH 155
L YD+ MP + + + +G+ Y+H
Sbjct: 106 LLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGME----FSEEKIQYLVYQMLKGLKYIH 161
Query: 156 HHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKG---TLGYLAPE 212
+ ++HRD+K N+ ++ D + ++ DFG A+ H + G T Y APE
Sbjct: 162 ---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVVTRWYRAPE 211
Query: 213 YAM-LGKASESCDVYSFGILLLELASGK 239
+ +++ D++S G ++ E+ +GK
Sbjct: 212 VILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 34/232 (14%)
Query: 38 NNFNYDNKLGEGGFGSVYWG-QLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHK-N 95
N + K+G G FG +Y G + G ++A+K V + ++ +E + ++
Sbjct: 9 NKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLH--IESKFYKMMQGGVG 66
Query: 96 LLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRR-------MDIAIGSA 148
+ S++ AEG ++V + + E L N+ R + +A
Sbjct: 67 IPSIKWCGAEGDYNVMVMELL-----------GPSLEDLFNFCSRKFSLKTVLLLADQMI 115
Query: 149 EGIVYLHHHATPHIIHRDIKASNVLLDADFKAQ---VADFGFAKLIPDGAT--HVTTR-- 201
I Y+H + + IHRD+K N L+ K + DFG AK D T H+ R
Sbjct: 116 SRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 172
Query: 202 --VKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKVNSAIKR 251
+ GT Y + + + S D+ S G +L+ G P + + +A KR
Sbjct: 173 KNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR 224
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 88/222 (39%), Gaps = 38/222 (17%)
Query: 40 FNYDNKLGEGGFGSVY-WGQLWDGSQIAVKRLKVWSNKAEM------EFAVEVEILARVR 92
++ +LG G F V + G + A K +K ++A E EV IL +V
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 93 HKNLLSLRGYCAEGQERLIV---------YDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
H N+++L + +++ +D++ + +L+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD------- 126
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNV-LLDADFKA---QVADFGFAKLIPDGATHVT 199
G+ YLH T I H D+K N+ LLD + ++ DFG A I DG
Sbjct: 127 ------GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF-- 175
Query: 200 TRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKP 241
+ GT ++APE D++S G++ L SG P
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 88/222 (39%), Gaps = 38/222 (17%)
Query: 40 FNYDNKLGEGGFGSVY-WGQLWDGSQIAVKRLKVWSNKAEM------EFAVEVEILARVR 92
++ +LG G F V + G + A K +K ++A E EV IL +V
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 93 HKNLLSLRGYCAEGQERLIV---------YDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
H N+++L + +++ +D++ + +L+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD------- 126
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNV-LLDADFKA---QVADFGFAKLIPDGATHVT 199
G+ YLH T I H D+K N+ LLD + ++ DFG A I DG
Sbjct: 127 ------GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF-- 175
Query: 200 TRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKP 241
+ GT ++APE D++S G++ L SG P
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 88/222 (39%), Gaps = 38/222 (17%)
Query: 40 FNYDNKLGEGGFGSVY-WGQLWDGSQIAVKRLKVWSNKAEM------EFAVEVEILARVR 92
++ +LG G F V + G + A K +K ++A E EV IL +V
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 93 HKNLLSLRGYCAEGQERLIV---------YDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
H N+++L + +++ +D++ + +L+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD------- 126
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNV-LLDADFKA---QVADFGFAKLIPDGATHVT 199
G+ YLH T I H D+K N+ LLD + ++ DFG A I DG
Sbjct: 127 ------GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF-- 175
Query: 200 TRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKP 241
+ GT ++APE D++S G++ L SG P
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 38/223 (17%)
Query: 40 FNYDNKLGEGGFGSVY-WGQLWDGSQIAVKRLKVWSNKAEM------EFAVEVEILARVR 92
++ +LG G F V + G + A K +K ++A E EV IL +V
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 93 HKNLLSLRGYCAEGQERLIV---------YDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
H N+++L + +++ +D++ + +L+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD------- 126
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNV-LLDADFKA---QVADFGFAKLIPDGATHVT 199
G+ YLH T I H D+K N+ LLD + ++ DFG A I DG
Sbjct: 127 ------GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF-- 175
Query: 200 TRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
+ GT ++APE D++S G++ L SG P
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 38/223 (17%)
Query: 40 FNYDNKLGEGGFGSVY-WGQLWDGSQIAVKRLKVWSNKAEM------EFAVEVEILARVR 92
++ +LG G F V + G + A K +K ++A E EV IL +V
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 93 HKNLLSLRGYCAEGQERLIV---------YDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
H N+++L + +++ +D++ + +L+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD------- 126
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNV-LLDADF---KAQVADFGFAKLIPDGATHVT 199
G+ YLH T I H D+K N+ LLD + ++ DFG A I DG
Sbjct: 127 ------GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF-- 175
Query: 200 TRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
+ GT ++APE D++S G++ L SG P
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 87/223 (39%), Gaps = 40/223 (17%)
Query: 42 YDN--KLGEGGFGSVY-WGQLWDGSQIAVKRLKVWSNKAEM------EFAVEVEILARVR 92
YD +LG G F V + G Q A K +K K+ + EV IL ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 93 HKNLLSLRGYCAEGQERLIV---------YDYMPNXXXXXXXXXXXXXECLLNWNRRMDI 143
H N+++L + +++ +D++ + +LN
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN------- 125
Query: 144 AIGSAEGIVYLHHHATPHIIHRDIKASNV-LLDADF---KAQVADFGFAKLIPDGATHVT 199
G+ YLH + I H D+K N+ LLD + + ++ DFG A I G
Sbjct: 126 ------GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF-- 174
Query: 200 TRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
+ GT ++APE D++S G++ L SG P
Sbjct: 175 KNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 99/224 (44%), Gaps = 23/224 (10%)
Query: 42 YDNKLGEGGFGSVY---------WGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVR 92
++ LG+G F ++ +GQL + +++ +K L F +++++
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHE-TEVLLKVLDKAHRNYSESFFEAASMMSKLS 70
Query: 93 HKNLLSLRGYCAEGQERLIVYDYMPNXXXXXXXXXXXXXECLLNWNRRMDIAIGSAEGIV 152
HK+L+ G C G E ++V +++ C +N ++++A A +
Sbjct: 71 HKHLVLNYGVCVCGDENILVQEFV--KFGSLDTYLKKNKNC-INILWKLEVAKQLAAAMH 127
Query: 153 YLHHHATPHIIHRDIKASNVLLDADFKAQVADFGFAKLIPDGATHVTTRVKGTL----GY 208
+L + +IH ++ A N+LL + + + F KL D +T K L +
Sbjct: 128 FLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKL-SDPGISITVLPKDILQERIPW 183
Query: 209 LAPEYAMLGK-ASESCDVYSFGILLLELAS-GKKPIEKVNSAIK 250
+ PE K + + D +SFG L E+ S G KP+ ++S K
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK 227
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 16/101 (15%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDAD--FKAQVADFGFAKLIPDGATHVTTRVK---G 204
G+ Y H + HRD+K N LLD + ++ADFG++K A+ + ++ K G
Sbjct: 127 GVSYAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSK-----ASVLHSQPKSAVG 178
Query: 205 TLGYLAPEYAMLGKASES--CDVYSFGILLLELASGKKPIE 243
T Y+APE +L K + DV+S G+ L + G P E
Sbjct: 179 TPAYIAPE-VLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 92/225 (40%), Gaps = 38/225 (16%)
Query: 38 NNFNYDNKLGEGGFGSVY-WGQLWDGSQIA---VKRLKVWSNK---AEMEFAVEVEILAR 90
+++ +LG G F V Q G + A +K+ ++ S++ + E EV IL
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 91 VRHKNLLSLRGYCAEGQERLIV---------YDYMPNXXXXXXXXXXXXXECLLNWNRRM 141
+RH N+++L + +++ +D++ + +L+
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD----- 126
Query: 142 DIAIGSAEGIVYLHHHATPHIIHRDIKASNV-LLDADF---KAQVADFGFAKLIPDGATH 197
G+ YLH + I H D+K N+ LLD + + ++ DFG A I G
Sbjct: 127 --------GVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF 175
Query: 198 VTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPI 242
+ GT ++APE D++S G++ L SG P
Sbjct: 176 --KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 16/101 (15%)
Query: 150 GIVYLHHHATPHIIHRDIKASNVLLDAD--FKAQVADFGFAKLIPDGATHVTTR-VKGTL 206
G+ Y H + I HRD+K N LLD + ++ DFG++K H + GT
Sbjct: 128 GVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTP 181
Query: 207 GYLAPEYAML----GKASESCDVYSFGILLLELASGKKPIE 243
Y+APE + GK + DV+S G+ L + G P E
Sbjct: 182 AYIAPEVLLRQEYDGKIA---DVWSCGVTLYVMLVGAYPFE 219
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 92/224 (41%), Gaps = 38/224 (16%)
Query: 38 NNFNYDNKLGEGGFGSVY-WGQLWDGSQIA---VKRLKVWSNK---AEMEFAVEVEILAR 90
+++ +LG G F V Q G + A +K+ ++ S++ + E EV IL
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 91 VRHKNLLSLRGYCAEGQERLIV---------YDYMPNXXXXXXXXXXXXXECLLNWNRRM 141
+RH N+++L + +++ +D++ + +L+
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD----- 119
Query: 142 DIAIGSAEGIVYLHHHATPHIIHRDIKASNV-LLDADF---KAQVADFGFAKLIPDGATH 197
G+ YLH + I H D+K N+ LLD + + ++ DFG A I G
Sbjct: 120 --------GVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF 168
Query: 198 VTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKP 241
+ GT ++APE D++S G++ L SG P
Sbjct: 169 --KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,955,301
Number of Sequences: 62578
Number of extensions: 479540
Number of successful extensions: 3862
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 238
Number of HSP's that attempted gapping in prelim test: 1497
Number of HSP's gapped (non-prelim): 1312
length of query: 400
length of database: 14,973,337
effective HSP length: 101
effective length of query: 299
effective length of database: 8,652,959
effective search space: 2587234741
effective search space used: 2587234741
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)