Query 015802
Match_columns 400
No_of_seqs 135 out of 1482
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 18:55:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015802.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015802hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ll3_A Gluconate kinase; xylul 100.0 1.6E-72 5.4E-77 582.3 34.9 346 7-389 1-348 (504)
2 4bc3_A Xylulose kinase; transf 100.0 2.2E-72 7.6E-77 585.5 33.5 385 8-398 8-395 (538)
3 3ifr_A Carbohydrate kinase, FG 100.0 3E-72 1E-76 580.8 32.2 348 5-389 2-355 (508)
4 3hz6_A Xylulokinase; xylulose, 100.0 3.4E-71 1.1E-75 573.3 33.3 344 9-389 4-359 (511)
5 2itm_A Xylulose kinase, xylulo 100.0 2.4E-67 8.1E-72 541.4 33.7 340 11-390 1-342 (484)
6 3i8b_A Xylulose kinase; strain 100.0 8.3E-68 2.8E-72 547.9 29.2 337 8-391 3-381 (515)
7 3jvp_A Ribulokinase; PSI-II, N 100.0 1.4E-66 4.7E-71 545.6 29.1 356 9-390 4-395 (572)
8 2p3r_A Glycerol kinase; glycer 100.0 3.9E-66 1.3E-70 535.3 30.6 341 8-389 1-355 (510)
9 3h3n_X Glycerol kinase; ATP-bi 100.0 7.8E-66 2.7E-70 532.6 32.5 340 8-389 3-357 (506)
10 4e1j_A Glycerol kinase; struct 100.0 1.9E-65 6.5E-70 531.1 33.0 342 6-389 22-377 (520)
11 3g25_A Glycerol kinase; IDP007 100.0 1.9E-65 6.6E-70 529.2 32.5 338 10-389 6-358 (501)
12 3ezw_A Glycerol kinase; glycer 100.0 5.4E-65 1.9E-69 528.7 29.4 344 8-390 2-357 (526)
13 2zf5_O Glycerol kinase; hypert 100.0 4E-64 1.4E-68 518.9 31.9 336 10-389 3-349 (497)
14 3l0q_A Xylulose kinase; xlylul 100.0 3.5E-64 1.2E-68 525.6 28.7 348 8-389 3-394 (554)
15 2dpn_A Glycerol kinase; thermu 100.0 1.1E-63 3.6E-68 515.5 30.6 336 10-389 2-352 (495)
16 2w40_A Glycerol kinase, putati 100.0 4.7E-63 1.6E-67 511.6 33.0 337 10-389 4-360 (503)
17 3h6e_A Carbohydrate kinase, FG 100.0 7.5E-64 2.6E-68 513.8 25.8 336 9-395 5-356 (482)
18 2d4w_A Glycerol kinase; alpha 100.0 1.7E-63 5.6E-68 515.1 28.0 337 10-389 2-357 (504)
19 2uyt_A Rhamnulokinase; rhamnos 100.0 2.3E-56 8E-61 460.1 21.6 322 7-379 1-334 (489)
20 2qm1_A Glucokinase; alpha-beta 98.6 8E-08 2.7E-12 92.6 8.0 117 10-152 6-128 (326)
21 2yhw_A Bifunctional UDP-N-acet 98.6 5.3E-08 1.8E-12 94.9 6.4 122 2-151 22-150 (343)
22 1z6r_A MLC protein; transcript 98.6 1.4E-07 4.7E-12 94.1 9.2 120 5-151 79-205 (406)
23 4db3_A Glcnac kinase, N-acetyl 98.5 1.7E-07 5.6E-12 90.9 7.2 120 3-151 17-139 (327)
24 3vgl_A Glucokinase; ROK family 98.4 1.4E-07 4.8E-12 91.2 5.7 112 10-152 2-116 (321)
25 1z05_A Transcriptional regulat 98.4 4.7E-07 1.6E-11 91.0 7.8 116 9-151 107-227 (429)
26 2hoe_A N-acetylglucosamine kin 98.4 2.9E-07 9.9E-12 91.0 6.1 78 10-112 87-167 (380)
27 2ch5_A NAGK protein; transfera 98.3 2.1E-07 7.1E-12 90.5 3.5 110 6-148 3-117 (347)
28 3r8e_A Hypothetical sugar kina 98.3 6.4E-07 2.2E-11 86.5 6.1 119 6-152 15-138 (321)
29 2e2o_A Hexokinase; acetate and 98.2 6.8E-07 2.3E-11 85.2 3.6 101 11-150 3-104 (299)
30 1hux_A Activator of (R)-2-hydr 98.2 3.8E-06 1.3E-10 79.2 8.1 69 10-104 3-72 (270)
31 3epq_A Putative fructokinase; 98.1 3.3E-06 1.1E-10 80.8 5.9 107 9-151 2-116 (302)
32 3htv_A D-allose kinase, alloki 98.1 3.8E-06 1.3E-10 80.7 5.8 75 10-111 7-81 (310)
33 1woq_A Inorganic polyphosphate 98.0 5.3E-06 1.8E-10 77.8 6.3 117 8-151 10-133 (267)
34 1zc6_A Probable N-acetylglucos 98.0 1E-05 3.5E-10 77.3 8.3 70 10-99 11-84 (305)
35 2ap1_A Putative regulator prot 98.0 6.7E-06 2.3E-10 79.3 6.5 117 4-149 18-137 (327)
36 4htl_A Beta-glucoside kinase; 98.0 5.4E-06 1.8E-10 79.1 5.7 109 10-151 4-116 (297)
37 3vov_A Glucokinase, hexokinase 98.0 3.8E-06 1.3E-10 80.4 3.8 112 11-151 2-117 (302)
38 3mcp_A Glucokinase; structural 97.9 4.9E-06 1.7E-10 81.9 2.8 116 7-151 6-127 (366)
39 1zbs_A Hypothetical protein PG 97.8 7.3E-06 2.5E-10 77.9 2.3 104 11-149 1-105 (291)
40 2gup_A ROK family protein; sug 97.7 5.7E-05 2E-09 71.4 7.0 105 11-151 5-113 (292)
41 1zxo_A Conserved hypothetical 97.7 6.3E-06 2.1E-10 78.3 0.2 102 11-149 1-103 (291)
42 2aa4_A Mannac kinase, putative 97.7 2.8E-05 9.7E-10 73.4 4.7 63 11-99 2-64 (289)
43 2q2r_A Glucokinase 1, putative 97.3 0.00021 7E-09 70.2 5.8 112 9-149 28-145 (373)
44 1sz2_A Glucokinase, glucose ki 97.2 0.00028 9.6E-09 68.1 5.2 33 8-40 12-45 (332)
45 2yhx_A Hexokinase B; transfera 97.2 0.001 3.6E-08 67.1 9.0 75 9-101 60-141 (457)
46 4ehu_A Activator of 2-hydroxyi 97.1 0.0014 4.8E-08 61.3 8.4 30 10-39 1-30 (276)
47 3h1q_A Ethanolamine utilizatio 96.7 0.0049 1.7E-07 57.2 9.0 61 8-84 26-86 (272)
48 3lm2_A Putative kinase; struct 96.5 0.0013 4.4E-08 60.1 3.0 24 8-33 4-27 (226)
49 3djc_A Type III pantothenate k 96.4 0.0033 1.1E-07 58.9 5.6 64 11-99 3-66 (266)
50 1saz_A Probable butyrate kinas 96.3 0.0032 1.1E-07 61.9 5.4 32 10-42 2-33 (381)
51 1cza_N Hexokinase type I; stru 96.2 0.0051 1.7E-07 67.4 6.1 122 10-152 78-220 (917)
52 1bdg_A Hexokinase; phosphotran 96.1 0.0083 2.8E-07 60.4 7.2 70 10-98 68-143 (451)
53 3bex_A Type III pantothenate k 95.9 0.0077 2.6E-07 55.7 5.1 62 11-99 4-65 (249)
54 4a2a_A Cell division protein F 95.3 0.038 1.3E-06 54.9 8.3 76 8-99 6-86 (419)
55 2h3g_X Biosynthetic protein; p 95.2 0.021 7.2E-07 53.4 5.6 65 11-99 1-65 (268)
56 3o8m_A Hexokinase; rnaseh-like 94.9 0.037 1.3E-06 56.0 6.7 59 10-85 80-140 (485)
57 1cza_N Hexokinase type I; stru 94.9 0.023 7.9E-07 62.2 5.5 73 9-98 525-602 (917)
58 3zyy_X Iron-sulfur cluster bin 94.6 0.019 6.4E-07 59.9 3.7 87 8-99 204-298 (631)
59 2ych_A Competence protein PILM 94.3 0.057 1.9E-06 52.4 6.2 74 8-99 11-86 (377)
60 3cet_A Conserved archaeal prot 91.1 0.28 9.5E-06 47.0 5.8 31 11-42 1-31 (334)
61 3hm8_A Hexokinase-3; glucose, 89.7 0.32 1.1E-05 48.5 5.2 71 11-99 60-134 (445)
62 3f9m_A Glucokinase; hexokinase 89.6 0.34 1.2E-05 48.7 5.2 65 5-85 69-141 (470)
63 3t69_A Putative 2-dehydro-3-de 89.0 0.42 1.5E-05 45.7 5.2 32 9-40 6-37 (330)
64 3nuw_A 2-OXO-3-deoxygalactonat 88.4 1.4 4.7E-05 41.5 8.2 32 10-42 6-37 (295)
65 2ews_A Pantothenate kinase; PA 87.5 0.45 1.5E-05 44.7 4.3 27 9-36 19-45 (287)
66 3sk3_A Acetate kinase, acetoki 84.7 1.2 4E-05 44.0 5.7 36 5-40 14-50 (415)
67 2ivn_A O-sialoglycoprotein end 83.3 2.2 7.5E-05 40.6 7.0 73 11-98 2-76 (330)
68 3cer_A Possible exopolyphospha 83.1 1.4 4.8E-05 42.4 5.5 80 10-101 16-100 (343)
69 1u6z_A Exopolyphosphatase; alp 81.9 1.9 6.5E-05 43.8 6.2 83 7-101 8-94 (513)
70 3mdq_A Exopolyphosphatase; str 81.5 3 0.0001 39.5 7.1 78 11-100 5-86 (315)
71 3en9_A Glycoprotease, O-sialog 80.7 3.1 0.00011 42.3 7.4 78 7-98 3-80 (540)
72 3eno_A Putative O-sialoglycopr 78.9 2.5 8.7E-05 40.3 5.7 79 7-98 3-81 (334)
73 3qfu_A 78 kDa glucose-regulate 78.4 1.2 4E-05 43.0 3.2 22 10-32 18-39 (394)
74 3r9p_A ACKA; ssgcid, seattle s 78.3 7.5 0.00026 37.8 8.7 66 12-96 14-83 (391)
75 1t6c_A Exopolyphosphatase; alp 78.2 3.2 0.00011 39.3 6.1 23 11-33 13-36 (315)
76 4gni_A Putative heat shock pro 77.3 1.2 4.1E-05 43.4 2.9 23 10-33 13-35 (409)
77 2f9w_A Pantothenate kinase; CO 76.2 2.9 0.0001 38.7 5.1 30 10-39 23-52 (271)
78 4ijn_A Acetate kinase, acetoki 74.3 12 0.00041 36.5 9.0 30 10-39 23-53 (398)
79 3cqy_A Anhydro-N-acetylmuramic 73.7 3.5 0.00012 40.0 5.1 88 7-104 2-103 (370)
80 1yuw_A Heat shock cognate 71 k 73.7 2 6.7E-05 44.0 3.5 23 7-29 1-23 (554)
81 3hi0_A Putative exopolyphospha 73.0 6.1 0.00021 40.0 7.0 80 5-101 10-98 (508)
82 2zgy_A Plasmid segregation pro 72.3 2.7 9.3E-05 39.5 3.9 24 11-34 1-24 (320)
83 3i33_A Heat shock-related 70 k 71.5 1.9 6.3E-05 41.9 2.6 23 9-32 22-44 (404)
84 1nbw_A Glycerol dehydratase re 69.4 10 0.00035 38.8 7.4 34 9-42 1-37 (607)
85 4gib_A Beta-phosphoglucomutase 69.2 1.1 3.9E-05 40.2 0.4 52 233-289 145-202 (250)
86 3cj1_A Ectonucleoside triphosp 68.3 5 0.00017 40.1 4.9 22 8-29 32-53 (456)
87 1dkg_D Molecular chaperone DNA 68.1 1.9 6.5E-05 41.5 1.8 21 11-32 3-23 (383)
88 3aap_A Ectonucleoside triphosp 67.9 4.3 0.00015 39.1 4.3 21 9-29 2-22 (353)
89 1vhx_A Putative holliday junct 63.3 5.6 0.00019 33.3 3.6 25 11-35 4-28 (150)
90 4b9q_A Chaperone protein DNAK; 61.0 4.1 0.00014 42.1 2.8 19 10-28 2-20 (605)
91 3bzc_A TEX; helix-turn-helix, 60.2 11 0.00037 40.3 5.9 31 9-39 328-359 (785)
92 3psf_A Transcription elongatio 55.8 23 0.00079 38.9 7.7 31 9-39 518-553 (1030)
93 3zx3_A Ectonucleoside triphosp 55.8 5.5 0.00019 39.7 2.6 22 8-29 32-53 (452)
94 2a6a_A Hypothetical protein TM 55.3 29 0.00099 30.8 7.1 63 10-98 12-74 (218)
95 2v7y_A Chaperone protein DNAK; 53.5 7.7 0.00026 39.0 3.3 19 11-29 3-21 (509)
96 2kho_A Heat shock protein 70; 51.9 6.3 0.00022 40.7 2.4 20 11-31 3-22 (605)
97 1jce_A ROD shape-determining p 50.9 7.7 0.00026 36.5 2.7 17 11-27 4-20 (344)
98 4h0p_A Acetate kinase; askha ( 50.8 15 0.00053 36.1 4.8 32 9-40 5-37 (438)
99 2d0o_A DIOL dehydratase-reacti 50.2 41 0.0014 34.4 7.8 31 9-39 1-33 (610)
100 3qbx_A Anhydro-N-acetylmuramic 47.0 15 0.00052 35.5 4.1 85 10-104 2-99 (371)
101 3khy_A Propionate kinase; csgi 46.7 24 0.00083 34.2 5.4 30 11-40 3-33 (384)
102 3r6m_A YEAZ, resuscitation pro 46.6 58 0.002 28.7 7.6 62 11-98 3-64 (213)
103 4ep4_A Crossover junction endo 46.4 56 0.0019 27.7 7.2 22 11-32 2-23 (166)
104 3psi_A Transcription elongatio 45.2 43 0.0015 37.5 7.7 31 9-39 515-550 (1219)
105 2e1z_A Propionate kinase; TDCD 44.4 28 0.00096 34.1 5.5 32 10-41 18-50 (415)
106 3d2f_A Heat shock protein homo 44.0 9.6 0.00033 39.9 2.3 18 12-29 4-21 (675)
107 4apw_A ALP12; actin-like prote 42.1 13 0.00046 34.9 2.8 21 7-27 4-24 (329)
108 2fsj_A Hypothetical protein TA 41.0 15 0.00051 34.9 3.0 22 11-34 22-43 (346)
109 1hjr_A Holliday junction resol 40.9 57 0.0019 27.3 6.3 23 11-33 2-24 (158)
110 2gel_A Putative GRAM negative 40.7 50 0.0017 29.4 6.3 62 11-98 2-63 (231)
111 1g99_A Acetate kinase; alpha/b 39.2 31 0.0011 33.7 4.9 31 11-41 2-33 (408)
112 4h0o_A Acetate kinase; askha ( 37.4 35 0.0012 33.2 4.9 31 9-40 13-43 (404)
113 2iir_A Acetate kinase; transfe 36.9 32 0.0011 33.6 4.6 31 11-41 2-33 (403)
114 1iv0_A Hypothetical protein; r 36.8 26 0.00089 26.9 3.2 22 12-33 3-24 (98)
115 3js6_A Uncharacterized PARM pr 29.0 33 0.0011 32.7 3.2 18 7-24 1-18 (355)
116 1dw0_A Cytochrome C; asparagin 28.3 16 0.00055 29.0 0.7 29 179-207 83-111 (112)
117 1xho_A Chorismate mutase; sout 26.3 71 0.0024 26.4 4.2 31 69-99 47-79 (148)
118 1nu0_A Hypothetical protein YQ 26.2 65 0.0022 26.3 4.1 24 11-34 4-27 (138)
119 1dbf_A Protein (chorismate mut 24.5 80 0.0027 25.5 4.2 31 69-99 18-50 (127)
120 1k8k_A ARP3, actin-like protei 24.1 31 0.0011 33.3 2.1 21 11-31 6-26 (418)
121 1ufy_A Chorismate mutase; shik 23.0 1E+02 0.0036 24.6 4.5 31 69-99 17-50 (122)
122 2fxu_A Alpha-actin-1, actin, a 22.4 36 0.0012 32.4 2.1 21 11-31 6-26 (375)
No 1
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=100.00 E-value=1.6e-72 Score=582.31 Aligned_cols=346 Identities=19% Similarity=0.233 Sum_probs=321.0
Q ss_pred CCCceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhcC
Q 015802 7 PKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSL 86 (400)
Q Consensus 7 ~~~~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 86 (400)
|+++|+||||+||||+|++++|.+|++++..+++++...|++| |+||||+ +||++++++++++.+..
T Consensus 1 M~m~~~lgIDiGtts~K~~l~d~~G~il~~~~~~~~~~~p~~g---~~e~dp~----------~~~~~~~~~i~~~~~~~ 67 (504)
T 3ll3_A 1 MSLKYIIGMDVGTTATKGVLYDINGKAVASVSKGYPLIQTKVG---QAEEDPK----------LIFDAVQEIIFDLTQKI 67 (504)
T ss_dssp -CCEEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCBCSSTT---CCEECHH----------HHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEEEecCCceEEEEEcCCCCEEEEEEeecceecCCCC---cEEECHH----------HHHHHHHHHHHHHHHhC
Confidence 6678999999999999999999999999999999998888764 6888888 99999999999987642
Q ss_pred CCCCEeEEEeecccceeeEecCCCccccccCCCCCCccccccccCCCCCCccccCCChHHHHHHHHHHhCChHHHHHHhC
Q 015802 87 DLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTG 166 (400)
Q Consensus 87 ~~~~I~aIgis~~~~~~v~~d~~g~~~~~~~~~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~tG 166 (400)
. .+|++|||++||+++|+||++|+| ++|+|+|+|+|+.++++++++.. +.++++++||
T Consensus 68 ~-~~I~~Igis~q~~~~v~~D~~G~p--------------------l~~~i~W~D~R~~~~~~~l~~~~-~~~~~~~~tG 125 (504)
T 3ll3_A 68 D-GKIAAISWSSQMHSLIGLGSDDEL--------------------LTNSITWADNCAKSIVQDAKNRG-FAQQIYRKTG 125 (504)
T ss_dssp S-SEEEEEEEEECSSCBEEECTTSCB--------------------SSCEECTTCCTTHHHHHHHHHHT-HHHHHHHHHC
T ss_pred C-CCeEEEEEECCCCcEEEECCCCCC--------------------cccceeCCccCHHHHHHHHHhcc-CHHHHHHHHC
Confidence 2 789999999999999999999998 69999999999999999999985 4678999999
Q ss_pred CCCCCCChHHHHHHHhhcCchhHHhcccccchhhHHHHHHhCCceeeccchhccccccccCCCCccHHHHHHcCCchhhh
Q 015802 167 SRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLEEK 246 (400)
Q Consensus 167 ~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~~~~~dyl~~~LTG~~~~~d~s~As~tgl~d~~~~~W~~~~l~~~g~~~~~~ 246 (400)
+++++.++++||+|+++|+||+|+|+++|++++|||.|+|||+.+ +|+|+||+|+|||+++++|++++|+.+|++ +++
T Consensus 126 ~~~~~~~~~~kl~wl~~~~pe~~~~~~~~~~~~dyl~~~LTG~~~-~d~s~As~t~l~d~~~~~W~~~ll~~~gi~-~~~ 203 (504)
T 3ll3_A 126 MPMHPMAPIYKLLWLKNKKTEVFSQAQKWIGIKEYIIFRLTGKLV-TDTTMAAGTGILNLKTLTWDQELLDILKIK-KEQ 203 (504)
T ss_dssp CCSCTTSHHHHHHHHHHHCHHHHHHCCEEECHHHHHHHHHHSCCE-EEHHHHTTTTCBCTTTSSBCHHHHHHHTCC-GGG
T ss_pred CCCCcccHHHHHHHHHHcChHHHHHHhheeCHHHHHHHHHhCCcc-cchhHhhcccCeeCCCCCcCHHHHHHcCCC-HHH
Confidence 999999999999999999999999999999999999999999997 999999999999999999999999999988 899
Q ss_pred cCCcccCCccccccCHHHHHHcCCCCCCeEEecCCchHHhhhcccCCCCCcEEEEecccceeeeecCCCCCCCCceeecC
Q 015802 247 LGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITDDPEPRLEGHVFPN 326 (400)
Q Consensus 247 LP~l~~~~~~~G~l~~~~a~~lGL~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~ 326 (400)
||+++++++++|++++++|+++||++||||++|++|++|+++|+|++++|++++++|||+++.+++++|..++....+++
T Consensus 204 LP~i~~~~~~~G~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~ 283 (504)
T 3ll3_A 204 LPKIAQPTKVIFPIKTEYVKKLGIDSDTKIILGASDGYLSTIGVNAIDSDHCALNVGTSGAIRTIVDQPKIDPSASYFCY 283 (504)
T ss_dssp SCEEECTTCEECCCCHHHHHHHTCCTTCEEEEEEEHHHHHHHTTTCCSTTEEEEEESSSEEEEEEESSCCCCTTCCSEEE
T ss_pred CCCeeCCcceeeccCHHHHHhcCCCcCCCEEEEccHHHHHHHhCCCCCCCcEEEEechhhhheeeCCCcccCCCCceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999887766555676
Q ss_pred CCCCCceEEEEEEecchhHHHHHHHHhcC--ccHHHHHHHHhcCCCCCCCeEEEeccCCCCCCCC
Q 015802 327 PVDTKGYMIMLVYKNASLTREDVRNRCAE--KSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPL 389 (400)
Q Consensus 327 ~~~~~~~~~~~~~~~~G~~~~W~~~~~~~--~~~~~l~~~a~~~~~g~~gl~~~P~l~G~r~P~~ 389 (400)
.+.++.|+.+++++++|.+++|+++.+.. ..++++.+++++++|+++|++|+|||.|+|+|+|
T Consensus 284 ~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~~~~a~~~~~g~~gl~~~P~~~Ger~P~~ 348 (504)
T 3ll3_A 284 PADKTHYLLGGPVNNGGIVFNWARQTLFDADETPQDFLDVAQTAPAGSRNLIFLPYLGGERAPIW 348 (504)
T ss_dssp EEETTEEEEEEEESCSHHHHHHHHHHHTCTTCCHHHHHHHHHTSCTTGGGCEEECCTTCBCTTTC
T ss_pred EeCCCeEEEEeehhhHHHHHHHHHHHhccchhHHHHHHHHHhcCCCCCCCeEEecCccCCCCCCC
Confidence 55578899999999999999999999864 3455666688899999999999999999999998
No 2
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=100.00 E-value=2.2e-72 Score=585.51 Aligned_cols=385 Identities=50% Similarity=0.846 Sum_probs=342.5
Q ss_pred CCceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCC-CCceeeCCCCCCCcCCChh-HHHHHHHHHHHHHhhc
Q 015802 8 KDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKT-KDGVYRDPSNNGRIVSPTL-MWIEALDLMLQKLSKS 85 (400)
Q Consensus 8 ~~~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~-~g~~e~d~~~~~~~~~~~~-~~~~~~~~~~~~l~~~ 85 (400)
.++|+||||+||||+|+++||.+|+++++++++|+..+|++++ .||.|++. ++.||+|. .||++++.+++.+.+.
T Consensus 8 ~~~~~lgID~GTts~Ka~l~d~~G~vv~~~~~~~~~~~p~~~~~~g~~e~~~---g~~eqdp~~~w~~~~~~~~~~l~~~ 84 (538)
T 4bc3_A 8 PRRCCLGWDFSTQQVKVVAVDAELNVFYEESVHFDRDLPEFGTQGGVHVHKD---GLTVTSPVLMWVQALDIILEKMKAS 84 (538)
T ss_dssp -CCEEEEEEECSSEEEEEEEETTCCEEEEEEEEHHHHSGGGCCBTTBEECTT---SSCEEEEHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEEEcCcCEEEEEECCCCCEEEEEEEecCCcCCcccCCCCeeecCC---CccccCcHHHHHHHHHHHHHHHHHc
Confidence 3569999999999999999999999999999999877776332 24566553 47788886 6888888888877664
Q ss_pred -CCCCCEeEEEeecccceeeEecCCCccccccCCCCCCccccccccCCCCCCccccCCChHHHHHHHHHHhCChHHHHHH
Q 015802 86 -LDLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKL 164 (400)
Q Consensus 86 -~~~~~I~aIgis~~~~~~v~~d~~g~~~~~~~~~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~ 164 (400)
.++.+|++||||+|||++|+||++|+..+.+||+++||+.+|...+.++|+|+|+|+|+.++++++++.+++.++++++
T Consensus 85 ~~~~~~I~aIgis~q~~~~v~~D~~g~~~l~~l~~~~~l~~~~~~~~pl~~ai~W~D~R~~~~~~~l~~~~~~~~~~~~~ 164 (538)
T 4bc3_A 85 GFDFSQVLALSGAGQQHGSIYWKAGAQQALTSLSPDLRLHQQLQDCFSISDCPVWMDSSTTAQCRQLEAAVGGAQALSCL 164 (538)
T ss_dssp TCCGGGEEEEEEEECSSCEEEEETTHHHHHHTCCTTSCHHHHHTTCBSCSEEECTTCCCCHHHHHHHHHHHTSHHHHHHH
T ss_pred CCChHHeEEEEecccceeEEEECCCccccccccccccchhhhccccccccCCcccccCcHHHHHHHHHHhhCcHHHHHHH
Confidence 6678999999999999999999999854566777777766665434489999999999999999999987656889999
Q ss_pred hCCCCCCCChHHHHHHHhhcCchhHHhcccccchhhHHHHHHhCCceeeccchhccccccccCCCCccHHHHHHcCCchh
Q 015802 165 TGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLE 244 (400)
Q Consensus 165 tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~~~~~dyl~~~LTG~~~~~d~s~As~tgl~d~~~~~W~~~~l~~~g~~~~ 244 (400)
||+++++.++++||+|+++|+||+|+|+++|++++|||.|+|||+.+.+|+|+||+|++||+++++|++++|+.+|++++
T Consensus 165 tG~~~~~~~~~~kl~wl~~~~Pe~~~~~~~~~~~~d~l~~~LTG~~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~ 244 (538)
T 4bc3_A 165 TGSRAYERFTGNQIAKIYQQNPEAYSHTERISLVSSFAASLFLGSYSPIDYSDGSGMNLLQIQDKVWSQACLGACAPHLE 244 (538)
T ss_dssp HSSCCCTTSHHHHHHHHHHHCHHHHHTEEEEEEHHHHHHHHHHTSCCCCBHHHHTTSSCEETTTTEECHHHHHHHCTTHH
T ss_pred HCCCCccccHHHHHHHHHHcCHHHHHHhheEEcHHHHHHHHHhCCCcccccchhhcccccccccCCCCHHHHHHhCccHH
Confidence 99999999999999999999999999999999999999999999975589999999999999999999999999997535
Q ss_pred hhcCCcccCCccccccCHHHHHHcCCCCCCeEEecCCchHHhhhcccCCCCCcEEEEecccceeeeecCCCCCCCCceee
Q 015802 245 EKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITDDPEPRLEGHVF 324 (400)
Q Consensus 245 ~~LP~l~~~~~~~G~l~~~~a~~lGL~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~ 324 (400)
++||+++++++++|+|++++|+++||++||||++|++|++|+++|++ +++|++++++|||+++.++++++..++....+
T Consensus 245 ~~LP~i~~~~~~~G~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~~-~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~ 323 (538)
T 4bc3_A 245 EKLSPPVPSCSVVGAISSYYVQRYGFPPGCKVVAFTGDNPASLAGMR-LEEGDIAVSLGTSDTLFLWLQEPMPALEGHIF 323 (538)
T ss_dssp HHHCCCBCSSCEEEECCHHHHHHHCCCTTCEEECCEEHHHHHHHHTT-CCTTCEEEEESSSEEEEEEESSCCCCSSSEEE
T ss_pred HHCCCcccccccccccCHHHHHHhCCCCCCeEEEecccHHhhhhccc-cCCCcEEEEeccchheEEecCCCCCCCCcceE
Confidence 89999999999999999999999999999999999999999999995 79999999999999999999998887777778
Q ss_pred cCCCCCCceEEEEEEecchhHHHHHHHHhcCccHHHHHHHHhcCCCCCCCeEEEeccCCCCCCCCCCCeeeeec
Q 015802 325 PNPVDTKGYMIMLVYKNASLTREDVRNRCAEKSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLPGVLFHYFP 398 (400)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~G~~~~W~~~~~~~~~~~~l~~~a~~~~~g~~gl~~~P~l~G~r~P~~~~~~~~~~~ 398 (400)
++.+.++.|+.++++++||.+++|+++.+...+|++|++++++++|+++|++|+|||.|||+|+ .. |.|+|+
T Consensus 324 ~~~~~~~~~~~~~~~~~gg~~~~w~~~~~~~~~~~~l~~~a~~~~~g~~gl~~lp~~~Ger~P~-~~-G~~~~~ 395 (538)
T 4bc3_A 324 CNPVDSQHYMALLCFKNGSLMREKIRNESVSRSWSDFSKALQSTEMGNGGNLGFYFDVMEITPE-II-GRHRFN 395 (538)
T ss_dssp EETTEEEEEEEEEEESSSHHHHHHHHHHHSTTCHHHHHHHHHTSCTTGGGCEEEEESSCCSSSC-CC-EEEEEC
T ss_pred EeecCCCCEEEeehhhccchHHHHHHHHhcCCCHHHHHHHHhcCCCCCCCeEEeecCCCCcCCC-CC-ceeeec
Confidence 8765456799999999999999999999877789999999999999999999999999999998 44 787764
No 3
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=100.00 E-value=3e-72 Score=580.77 Aligned_cols=348 Identities=15% Similarity=0.133 Sum_probs=319.0
Q ss_pred CCCCCceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhh
Q 015802 5 SLPKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSK 84 (400)
Q Consensus 5 ~~~~~~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (400)
|.+.++|+||||+|||++|++++|.+|+++++.+.+++...|++| |.||||+ +||++++++++++.+
T Consensus 2 ~~~~~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g---~~e~dp~----------~~~~~i~~~i~~~~~ 68 (508)
T 3ifr_A 2 SLAQGRQVIGLDIGTTSTIAILVRLPDTVVAVASRPTTLSSPHPG---WAEEDPA----------QWWDNARAVLAELKT 68 (508)
T ss_dssp -----CEEEEEEECSSEEEEEEEETTTEEEEEEEEECCCBCSSTT---CCEECHH----------HHHHHHHHHHHHHHH
T ss_pred CcccCCEEEEEEecCcceEEEEECCCCCEEEEEEEecceecCCCC---ceEECHH----------HHHHHHHHHHHHHHH
Confidence 345668999999999999999999999999999999998888764 6888888 999999999999875
Q ss_pred c--CCCCCEeEEEeecccceeeEecCCCccccccCCCCCCccccccccCCCCCCccccCCChHHHHHHHHHHhCChHHHH
Q 015802 85 S--LDLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELS 162 (400)
Q Consensus 85 ~--~~~~~I~aIgis~~~~~~v~~d~~g~~~~~~~~~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~~~~~~~~~~~~ 162 (400)
. .++.+|.+|||++|++++|+||++|+| ++|+|+|+|+|+.++++++++.. +.++++
T Consensus 69 ~~~~~~~~I~~Igis~~~~~~v~~D~~G~~--------------------l~~~i~W~D~R~~~~~~~l~~~~-~~~~~~ 127 (508)
T 3ifr_A 69 TAGESDWRPGGICVTGMLPAVVLLDDRGAV--------------------LRPSIQQSDGRCGDEVAELRAEV-DSEAFL 127 (508)
T ss_dssp HHCGGGCCEEEEEEEECSSCBEEECTTSCB--------------------CSCEECTTCCCCHHHHHHHHHHS-CHHHHH
T ss_pred hcCCChhheEEEEEECCCCcEEEECCCCCC--------------------cccceeccccChHHHHHHHHhhc-cHHHHH
Confidence 3 556899999999999999999999998 68999999999999999999986 467899
Q ss_pred HHhCCCCCCCChHHHHHHHhhcCchhHHhcccccchhhHHHHHHhCCceeeccchhccccccccCCCCccHHHHHHcCCc
Q 015802 163 KLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPS 242 (400)
Q Consensus 163 ~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~~~~~dyl~~~LTG~~~~~d~s~As~tgl~d~~~~~W~~~~l~~~g~~ 242 (400)
++||+++++.++++||+|+++|+||+|+|+++|++++|||.|+|||+.+ +|+|+||+|++||+++++|++++|+.+|++
T Consensus 128 ~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~l~~~dyl~~~LTG~~~-~d~s~As~t~l~d~~~~~W~~~ll~~~gi~ 206 (508)
T 3ifr_A 128 ARTGNGVTQQLVTAKLRWIERHEPAVFGAIATVCGSYDYINMLLTGERV-VDRNWALEGGFIDLASGTVEADLVALAHIP 206 (508)
T ss_dssp HHHSSCSSTTSHHHHHHHHHHHCHHHHHTCSEEECHHHHHHHHHHCCCC-EEHHHHHHHTCEETTTTEECHHHHHTTTSC
T ss_pred HHHCCCCChhhHHHHHHHHHHcCHHHHHHHhhhcCchHHHHHHhcCCcc-ccHhHhhcccCccCccCCCCHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999997 999999999999999999999999999988
Q ss_pred hhhhcCCcccCCccccccCHHHHHHcCCCCCCeEEecCCchHHhhhcccCCCCCcEEEEecccceeeeecCCCCCCCCce
Q 015802 243 LEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITDDPEPRLEGH 322 (400)
Q Consensus 243 ~~~~LP~l~~~~~~~G~l~~~~a~~lGL~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~ 322 (400)
+++||+++++++++|++++++|+++||++|+||++|++|++|+++|+|++++|++++++|||+++.++++++..++...
T Consensus 207 -~~~LP~i~~~~~~~G~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~ 285 (508)
T 3ifr_A 207 -PSAVPPAHPTHRVLGAVTAEAAALTGLPTGLPVYGGAADHIASALAAGITRPGDVLLKFGGAGDIIVASATAKSDPRLY 285 (508)
T ss_dssp -GGGSCCEECTTSEEEECCHHHHHHHCCCTTCEEECCEEHHHHHHHHTTCCSTTEEEEEESSSEEEEECBSCCCCBTTBB
T ss_pred -HHHCCCCcCCCCeeeccCHHHHHHhCCCCCCeEEEECchHHHHHHhCCCCCCCcEEEEechhhhheeeCCCcccCCCcc
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999988766666
Q ss_pred eecCCCCCCceEEEEEEecchhHHHHHHHHhc--Cc--cHHHHHHHHhcCCCCCCCeEEEeccCCCCCCCC
Q 015802 323 VFPNPVDTKGYMIMLVYKNASLTREDVRNRCA--EK--SWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPL 389 (400)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~G~~~~W~~~~~~--~~--~~~~l~~~a~~~~~g~~gl~~~P~l~G~r~P~~ 389 (400)
.+++. .+|.|+.+++++++|.+++|+++.+. .. +|++|++++++++++++|++|+|||+|+|+|+|
T Consensus 286 ~~~~~-~~g~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~~l~~~a~~~~~~~~gl~flP~~~Ger~P~~ 355 (508)
T 3ifr_A 286 LDYHL-VPGLYAPNGCMAATGSALNWLAKLLAPEAGEAAHAQLDALAAEVPAGADGLVCLPYFLGEKTPIH 355 (508)
T ss_dssp CCBCS-STTCBCCEEEESSSHHHHHHHHHHHSTTCTTHHHHHHHHHHHTSCTTGGGCEEECCTTCCC----
T ss_pred eeeee-cCCceEEechhhhhHHHHHHHHHHHhhcCCCCCHHHHHHHHhcCCCCCCCeEEecCCCCCCCCCC
Confidence 67775 48899999999999999999999983 33 799999999999999999999999999999986
No 4
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=100.00 E-value=3.4e-71 Score=573.31 Aligned_cols=344 Identities=16% Similarity=0.158 Sum_probs=320.5
Q ss_pred CceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhc-CC
Q 015802 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS-LD 87 (400)
Q Consensus 9 ~~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~ 87 (400)
++|+||||+||||+|++++|.+|++++..+++++..+|.+| |+||||+ +||+++.++++++.+. .+
T Consensus 4 m~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g---~~e~dp~----------~~~~~~~~~i~~~~~~~~~ 70 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALADRDGGLHFQRSIALETYGDGNG---PVEQDAG----------DWYDAVQRIASSWWQSGVD 70 (511)
T ss_dssp CCEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBSTTSS---CCEECHH----------HHHHHHHHHHHHHHTTTCC
T ss_pred ccEEEEEEeCCCceEEEEECCCCCEEEEEEeecceecCCCC---CEEECHH----------HHHHHHHHHHHHHHhcCCC
Confidence 46999999999999999999999999999999998888764 6888888 9999999999998732 45
Q ss_pred CCCEeEEEeecccceeeEecCCCccccccCCCCCCccccccccCCCCCCccccCCChHHHHHHHHHHhCChHHHHHHhCC
Q 015802 88 LSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGS 167 (400)
Q Consensus 88 ~~~I~aIgis~~~~~~v~~d~~g~~~~~~~~~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~tG~ 167 (400)
..+|++|||++|++++|+||++|+| ++|+|+|+|+|+.++++++++..+ .++++++||+
T Consensus 71 ~~~I~~Igis~q~~~~v~~D~~G~p--------------------l~~~i~W~D~R~~~~~~~l~~~~~-~~~~~~~tG~ 129 (511)
T 3hz6_A 71 ARRVSAIVLSGQMQNFLPLDQDHEP--------------------LHRAVLYSDKRPLKEAEEINARHG-ADNLWSALEN 129 (511)
T ss_dssp GGGEEEEEEEECCSCBEEECTTSCB--------------------SSCEECTTCCCCHHHHHHHHHHHC-HHHHHHHHSS
T ss_pred hhHeEEEEEecccccEEEECCCcCC--------------------CcCceecCCCCHHHHHHHHHhccC-HHHHHHHHCC
Confidence 6789999999999999999999998 699999999999999999999874 6789999999
Q ss_pred CCCCCChHHHHHHHhhcCchhHHhcccccc-hhhHHHHHHhCCceeeccchhccccccccCCCCccHHHHHHcCCchhhh
Q 015802 168 RGYERFTGPQIRKLFQTQPGVYDDTERISV-VSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLEEK 246 (400)
Q Consensus 168 ~~~~~~~~~kl~Wl~~~~pe~~~~~~~~~~-~~dyl~~~LTG~~~~~d~s~As~tgl~d~~~~~W~~~~l~~~g~~~~~~ 246 (400)
++++.++++||+|+++|+||+|+|+++|++ ++|||.|+|||+.+ +|+|+||+|++||+++++|++++|+.+|++ +++
T Consensus 130 ~~~~~~~~~kl~wl~~~~p~~~~~~~~~l~~~~dyl~~~LTG~~~-~d~s~As~t~l~d~~~~~W~~~ll~~~gi~-~~~ 207 (511)
T 3hz6_A 130 PMTAASILPKLVFWRASFPQAFGRLRHVVLGAKDYVVLRLTGRHA-TDRTNASTTGLYRPKDDAWHVELLADYGFS-LDL 207 (511)
T ss_dssp CCSTTSHHHHHHHHHHHCHHHHTTCCEEECSHHHHHHHHHHSCCE-ECHHHHHHTTCEETTTTEECHHHHHHTTCC-GGG
T ss_pred CCCchhHHHHHHHHHHhChHHHHHHHHHhcCcHHHHHHHHhCCce-eeHhHhhcccceeCCCCCcCHHHHHHhCCC-HHH
Confidence 999999999999999999999999999999 99999999999987 999999999999999999999999999988 899
Q ss_pred cCCcccCCccccccCHHHHHHcCCCCCCeEEecCCchHHhhhcccCCCCCcEEEEecccceeeeecC-CCCCC-CCc--e
Q 015802 247 LGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITD-DPEPR-LEG--H 322 (400)
Q Consensus 247 LP~l~~~~~~~G~l~~~~a~~lGL~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~-~~~~~-~~~--~ 322 (400)
||+++++++++|++++++|+++||++|+||++|++|++|+++|+|++++|++++++|||+++.++++ +|..+ +.. .
T Consensus 208 LP~i~~~~~~~G~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~ 287 (511)
T 3hz6_A 208 MPRLLEPGEQVGGVSALAARQTGFVSGTPVLCGLGDAGAATLGVGVLDDEDAYLHLGTTGWLARLTQTDPVGDMPVGTIF 287 (511)
T ss_dssp SCEECCTTSEEEECCHHHHHHHCCCTTCEEECCEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEEEECCCCCSCCSSCCE
T ss_pred CCCCcCCCCcccccCHHHHHhhCCCCCCeEEEECchHHHHHHhCCCCCCCcEEEEecchhhheeecCCeecccCCCCceE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 88866 543 4
Q ss_pred eecCCCCCCceEEEEEEecchhHHHHHHHHhc--C-ccHHHHHHHHhcCCCC---CCCeEEEeccCCCCCCCC
Q 015802 323 VFPNPVDTKGYMIMLVYKNASLTREDVRNRCA--E-KSWDVFNKYLQQTPPL---NGGKMGFYYKEHEILPPL 389 (400)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~G~~~~W~~~~~~--~-~~~~~l~~~a~~~~~g---~~gl~~~P~l~G~r~P~~ 389 (400)
.+++.+ ++.|..+++++++|.+++|+++.+. . .+|++|++++++++|+ ++|++|+|||.|+|+|+|
T Consensus 288 ~~~~~~-~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~l~~~a~~~~~g~~~~~gl~~~P~~~Ger~P~~ 359 (511)
T 3hz6_A 288 RLAGII-AGKTLQVAPVLNAGNILQWALTLVGHRPGEDCAEYFHMAAAEVQGVTVPDGLLFVPYLHAERCPVE 359 (511)
T ss_dssp EECSSS-TTEEEEEEEESSSHHHHHHHGGGGTCCTTSCSHHHHHHHHHHHTTCCCCTTCEEEEESSCBCSSSC
T ss_pred EEEEec-CCceEEEeehhhHHHHHHHHHHHhcccccccHHHHHHHHHhCCCCCCCCCCEEEeCCCCCCCCCCC
Confidence 577754 7787777999999999999999986 3 4799999999999999 999999999999999987
No 5
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=100.00 E-value=2.4e-67 Score=541.37 Aligned_cols=340 Identities=21% Similarity=0.340 Sum_probs=307.1
Q ss_pred eEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhcCCCCC
Q 015802 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 90 (400)
++||||+||||+|++++|.+|++++..+.+++..+|++| |.|||++ +||++++++++++.+.....+
T Consensus 1 ~~lgiDiGtt~~k~~l~d~~g~~l~~~~~~~~~~~p~~g---~~e~d~~----------~~~~~i~~~i~~~~~~~~~~~ 67 (484)
T 2itm_A 1 MYIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPL---WSEQDPE----------QWWQATDRAMKALGDQHSLQD 67 (484)
T ss_dssp CEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTT---CCEECHH----------HHHHHHHHHHHHHHHHSCCTT
T ss_pred CEEEEEecCcccEEEEECCCCCEEEEEEeccccccCCCC---CEeECHH----------HHHHHHHHHHHHHHHhCCccc
Confidence 479999999999999999999999999999988888764 6888888 999999999999876433568
Q ss_pred EeEEEeecccceeeEecCCCccccccCCCCCCccccccccCCCCCCccccCCChHHHHHHHHHHhCChHHHHHHhCCCCC
Q 015802 91 VTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGY 170 (400)
Q Consensus 91 I~aIgis~~~~~~v~~d~~g~~~~~~~~~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~tG~~~~ 170 (400)
|++|||++|+|++++||++|+| ++|.|+|+|.|+.++++++++..+ .++++||++++
T Consensus 68 i~~Igis~~~~~~v~~D~~G~~--------------------l~~~i~w~D~R~~~~~~~l~~~~~---~~~~~tG~~~~ 124 (484)
T 2itm_A 68 VKALGIAGQMHGATLLDAQQRV--------------------LRPAILWNDGRCAQECTLLEARVP---QSRVITGNLMM 124 (484)
T ss_dssp CCEEEEEECSSCBEEECTTCCB--------------------CSCEECTTCCTTHHHHHHHHHHCT---THHHHHSSCCC
T ss_pred eEEEEEcCCcCcEEEECCCcCC--------------------CcccceecccCcHHHHHHHHHhHH---HHHHHhCCCCC
Confidence 9999999999999999999998 689999999999999999998752 36788999999
Q ss_pred CCChHHHHHHHhhcCchhHHhcccccchhhHHHHHHhCCceeeccchhccccccccCCCCccHHHHHHcCCchhhhcCCc
Q 015802 171 ERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLEEKLGKL 250 (400)
Q Consensus 171 ~~~~~~kl~Wl~~~~pe~~~~~~~~~~~~dyl~~~LTG~~~~~d~s~As~tgl~d~~~~~W~~~~l~~~g~~~~~~LP~l 250 (400)
+.++++||+|+++|+||+|+|+++++.++|||.|+|||+.+ +|+|+||+|++||+++++|++++++.+|++ .++||++
T Consensus 125 ~~~~~~kl~wl~~~~P~~~~~~~~~l~~~d~l~~~LTG~~~-td~s~As~t~l~d~~~~~W~~~ll~~~gi~-~~~lp~i 202 (484)
T 2itm_A 125 PGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRMTGEFA-SDMSDAAGTMWLDVAKRDWSDVMLQACDLS-RDQMPAL 202 (484)
T ss_dssp TTSHHHHHHHHHHHCHHHHTTCCEEECHHHHHHHHHHSCCE-EEHHHHHTTTCEETTTTEECHHHHHTTTCC-GGGSCEE
T ss_pred cccHHHHHHHHHHhChHHHHHHhheeCcHHHHHHHHhCCce-eeHHHhhccccccCCCCCcCHHHHHHcCCC-HHHCCCc
Confidence 99999999999999999999999999999999999999987 999999999999999999999999999988 8999999
Q ss_pred ccCCccccccCHHHHHHcCCCCCCeEEecCCchHHhhhcccCCCCCcEEEEecccceeeeecCCCCCCC--CceeecCCC
Q 015802 251 APAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITDDPEPRL--EGHVFPNPV 328 (400)
Q Consensus 251 ~~~~~~~G~l~~~~a~~lGL~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~--~~~~~~~~~ 328 (400)
+++++++|++++++|+++||+ |+||++|+||++|+++|+|+.++|++++++|||+++..+++++..++ ....+++.
T Consensus 203 ~~~~~~~G~~~~~~a~~~Gl~-g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~- 280 (484)
T 2itm_A 203 YEGSEITGALLPEVAKAWGMA-TVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCHA- 280 (484)
T ss_dssp ECTTSEEEECCHHHHHHHTSC-CCEEECCEEHHHHHHHHHTCCSTTCEEEEESSSEEEEEECSSCCCCCSSSCEEEECS-
T ss_pred cCCcceeeccCHHHHHHhCCC-CCeEEEEchHHHHHHHhCCCCCCCcEEEEccchheeEEecCCCccCcccceEEeecc-
Confidence 999999999999999999999 99999999999999999999999999999999999999998876544 34556665
Q ss_pred CCCceEEEEEEecchhHHHHHHHHhcCccHHHHHHHHhcCCCCCCCeEEEeccCCCCCCCCC
Q 015802 329 DTKGYMIMLVYKNASLTREDVRNRCAEKSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLP 390 (400)
Q Consensus 329 ~~~~~~~~~~~~~~G~~~~W~~~~~~~~~~~~l~~~a~~~~~g~~gl~~~P~l~G~r~P~~~ 390 (400)
.++.|+.+++++++|.+++|+++.+...+|+++++++++++++++|++|+|||.|+|+|+|-
T Consensus 281 ~~g~~~~~~~~~~~G~~~~W~~~~~~~~~~~~~~~~a~~~~~~~~gl~~lP~~~G~r~P~~~ 342 (484)
T 2itm_A 281 LPQRWHLMSVMLSAASCLDWAAKLTGLSNVPALIAAAQQADESAEPVWFLPYLSGERTPHNN 342 (484)
T ss_dssp STTCEEEEEEECCHHHHHHHHHHHTTCCSHHHHHHHGGGCCTTSCCCEEEEEEC--------
T ss_pred cCCeeeeeehhhhHHHHHHHHHHhcCcccHHHHHHHHhcCCCCCCCeEEeCCCCCCCCCCCC
Confidence 47899999999999999999999886567999999999999999999999999999999873
No 6
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=100.00 E-value=8.3e-68 Score=547.89 Aligned_cols=337 Identities=24% Similarity=0.313 Sum_probs=309.0
Q ss_pred CCceEEEEEecCcceEEEEEc-CCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhcC
Q 015802 8 KDSLFLGFDSSTQSLKATVLD-SNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSL 86 (400)
Q Consensus 8 ~~~~~lgIDiGttsiKa~l~d-~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 86 (400)
.++|+||||+||||+|++++| .+|+++++.+.+++ ++.||||+ +||++++++++++. .
T Consensus 3 ~~~~~lgIDiGtts~ka~l~d~~~G~i~~~~~~~~~---------g~~e~d~~----------~~~~~i~~~l~~~~--~ 61 (515)
T 3i8b_A 3 LRTLVAGVDTSTQSCKVRVTDAETGELVRFGQAKHP---------NGTSVDPS----------YWWSAFQEAAEQAG--G 61 (515)
T ss_dssp CSCEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------SSSEECTH----------HHHHHHHHHHHHTT--C
T ss_pred CCcEEEEEEeccccEEEEEEECCCCeEEEEEEEeCC---------CCceECHH----------HHHHHHHHHHHhcC--C
Confidence 467999999999999999999 89999999998873 46899999 99999999988753 2
Q ss_pred CCCCEeEEEeecccceeeEecCCCccccccCCCCCCccccccccCCCCCCccccCCChHHHHHHHHHHhCC-h-------
Q 015802 87 DLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGG-A------- 158 (400)
Q Consensus 87 ~~~~I~aIgis~~~~~~v~~d~~g~~~~~~~~~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~~~~~~~-~------- 158 (400)
..+|++|||++|++++|+||++|+| ++|+|+|+|+|+.++++++++.++. .
T Consensus 62 -~~~I~~Igis~q~~~~v~~D~~G~p--------------------l~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~~~~ 120 (515)
T 3i8b_A 62 -LDDVSALAVGGQQHGMVILDNQGNV--------------------IRDAMLWNDTSSAPQAAALIEKLGAAPAQDGEPE 120 (515)
T ss_dssp -STTEEEEEEEECSSCBEEECTTSCB--------------------CSCEECTTCCTTHHHHHHHHHHHHCSCCCTTCCS
T ss_pred -ccCceEEEEeCCcceEEEECCCCCC--------------------cCCcceecCCCHHHHHHHHHHhcCcccccccccc
Confidence 5789999999999999999999998 6999999999999999999998643 2
Q ss_pred -------HHHHHHhCCCCCCCChHHHHHHHhhcCchhHHhcccccchhhHHHHHHhCC-------------ceeeccchh
Q 015802 159 -------LELSKLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGA-------------YACIDETDA 218 (400)
Q Consensus 159 -------~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~~~~~dyl~~~LTG~-------------~~~~d~s~A 218 (400)
++++++||+++++.++++||+||++|+||+|+|+++|++++|||.|+|||+ .+ +|+|+|
T Consensus 121 ~~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~Pe~~~~~~~~l~~~dyl~~~LTG~~~~~~~~~~~~~~~~-td~s~A 199 (515)
T 3i8b_A 121 DPIARGKQRWVKAVGSSPVASYTLTKVAWVAENEPENVKKIAAICLPHDWLSWRIAGYGPVAEGEDAHLEALF-TDRSDA 199 (515)
T ss_dssp SHHHHHHHHHHHHHSSCCCTTSHHHHHHHHHHHCHHHHTTCSEEECHHHHHHHHHTTCCCCCTTSCCCGGGCE-EEHHHH
T ss_pred cccchhHHHHHHHHCCCCCchhHHHHHHHHHHcChHHHHHHheecCHHHHHHHHhcCCCccccccccccccee-ecHHHh
Confidence 789999999999999999999999999999999999999999999999998 45 999999
Q ss_pred ccccccccCCCCccHHHHHHc-CCc----------hhhhcCCcccCCccccccCHHHHHHcCCCCCCeEEecCCchHHhh
Q 015802 219 AGMNLMDIRQRVWSKIVLEAT-APS----------LEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSL 287 (400)
Q Consensus 219 s~tgl~d~~~~~W~~~~l~~~-g~~----------~~~~LP~l~~~~~~~G~l~~~~a~~lGL~~g~pV~~g~~D~~aa~ 287 (400)
|+|++||+++++|++++|+.+ |++ +.++||+++++++++|.+++++|+++||++||||++|++|++|++
T Consensus 200 s~t~l~d~~~~~W~~~ll~~~~gi~~~~~~~~~~~~~~~LP~i~~~~~~~G~v~~~~A~~~Gl~~g~pV~~g~~D~~aa~ 279 (515)
T 3i8b_A 200 SGTIYYDAASNEYRRDLIAMVLEAAEGAKAAQSHAEAIVLPTVLGPRDAAPVKADPAIAGKNVEGGCLLAPGGGDNAMAS 279 (515)
T ss_dssp TTSSSEETTTTEECHHHHHHHHHHHHCHHHHHHHHHHSBCCEEECTTCCCSSCCCTTTTTTTSTTCCEECCCEEHHHHHH
T ss_pred hcccCeeCCcCccCHHHHHhhcCCCcccccccccchHHHCCCCcCCcCcccCcCHHHHHHhCCCCCCeEEEECchHHHHH
Confidence 999999999999999999998 873 036899999999999999999999999999999999999999999
Q ss_pred hcccCCCCCcEEEEecccceeeeecCCCCCCCCc--eeecCCCCCCceEEEEEEecchhHHHHHHHHhcCccHHHHHHHH
Q 015802 288 AGLTLSTSGDLAISLGTSDTVFGITDDPEPRLEG--HVFPNPVDTKGYMIMLVYKNASLTREDVRNRCAEKSWDVFNKYL 365 (400)
Q Consensus 288 ~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~G~~~~W~~~~~~~~~~~~l~~~a 365 (400)
+|+| +++|++++++|||+++.++++++..++.. ..+++. +|.|+.+++++++|.+++|+++.+.. +|++|++++
T Consensus 280 lG~g-~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~gg~~l~w~~~~~~~-~~~~l~~~a 355 (515)
T 3i8b_A 280 LGLG-MAVGDVSISLGTSGVAAAISENPTYDLTGAVSGFADC--TGHYLPLACTINGSRILDAGRAALGV-DYDELAKLA 355 (515)
T ss_dssp HHTT-CCTTEEEEEESSSEEEEECBSSCCCCTTSCSEEEECS--SSSEEEEEEESCSTHHHHHHHHHHTC-CHHHHHHHH
T ss_pred hhCC-CCCCcEEEEechhhhhhcccCccccCCCCcEEeeecC--CCCEEEeeecccHHHHHHHHHHHhCC-CHHHHHHHH
Confidence 9999 89999999999999999999998876644 345553 78899999999999999999998854 799999999
Q ss_pred hcCCCCCCCeEEEeccCCCCCCCCCC
Q 015802 366 QQTPPLNGGKMGFYYKEHEILPPLPG 391 (400)
Q Consensus 366 ~~~~~g~~gl~~~P~l~G~r~P~~~~ 391 (400)
++++|+++|++|+|||.|+|+|+||+
T Consensus 356 ~~~~~g~~gl~~lP~~~Ger~P~~~~ 381 (515)
T 3i8b_A 356 FASKPGANGITLVPYFDGERTPNRPN 381 (515)
T ss_dssp HHSCTTGGGCEEECCTTCBTTTTBTT
T ss_pred HhCCCCCCCeEEecCCCCCcCCCCcC
Confidence 99999999999999999999998875
No 7
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=100.00 E-value=1.4e-66 Score=545.60 Aligned_cols=356 Identities=14% Similarity=0.171 Sum_probs=307.1
Q ss_pred CceEEEEEecCcceEEEEEcC-CCCEEEEEEeecc-----CCCCC------CCCCCceeeCCCCCCCcCCChhHHHHHHH
Q 015802 9 DSLFLGFDSSTQSLKATVLDS-NLNIVASEQLQFD-----SELPH------YKTKDGVYRDPSNNGRIVSPTLMWIEALD 76 (400)
Q Consensus 9 ~~~~lgIDiGttsiKa~l~d~-~G~~v~~~~~~~~-----~~~~~------~~~~g~~e~d~~~~~~~~~~~~~~~~~~~ 76 (400)
++|+||||+||||+|++++|. +|+++++.+.+++ ...|+ + +|+||||+ +||++++
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~~~G~i~~~~~~~~~~~~~~~~~p~~~~~~~~---g~~eqdp~----------~~~~~~~ 70 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDLSNGQELADHVTPYRHGVIDQYLPNTNIKLGH---EWALQHPL----------DYVEVLT 70 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEETTTCCEEEEEEEECTTCCBSSBSTTSCCBCCT---TCCEECHH----------HHHHHHT
T ss_pred CCEEEEEecCCcceEEEEEECCCCeEEEEEEeccCCccccccCCccccCCCC---CcEEECHH----------HHHHHHH
Confidence 579999999999999999998 9999999999998 34444 3 34666666 9999999
Q ss_pred HHHHHHhhc--CCCCCEeEEEeecccceeeEecCCCccccccCC-CCCCccccccccCCCCCCccccCCChHHHHHHHHH
Q 015802 77 LMLQKLSKS--LDLSKVTAVSGSGQQHGSVYWKKGSATILSSLD-PKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEK 153 (400)
Q Consensus 77 ~~~~~l~~~--~~~~~I~aIgis~~~~~~v~~d~~g~~~~~~~~-~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~~~ 153 (400)
++++++++. .++.+|++|||++||+++|+||++|+|+.+..+ .+.| ..++|+|+|.|+.++++++++
T Consensus 71 ~~i~~~l~~~~~~~~~I~~Igis~q~~~~v~~D~~G~pl~~~~~~~~~p----------~~~ai~W~D~R~~~~~~~l~~ 140 (572)
T 3jvp_A 71 TSVPAVMKESGVDADDVIGIGVDFTACTMLPVDEEGQPLCLLAQYKDNP----------HSWVKLWKHHAAQDKANAINE 140 (572)
T ss_dssp THHHHHHHC---CCSCEEEEEEEECSSCEEEECTTSCBGGGSSSTTSSG----------GGSEECTTCCTTHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhHEEEEEEecCCCcEEEECCCCCCCccCccccccc----------cccceecCccchHHHHHHHHH
Confidence 999998764 567899999999999999999999998422111 0011 234899999999999999988
Q ss_pred HhC-ChHHHHHHhCCCCCCCChHHHHHHHhhcCchhHHhcccccchhhHHHHHHhCCceeeccchhccccccccCCCCc-
Q 015802 154 AVG-GALELSKLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVW- 231 (400)
Q Consensus 154 ~~~-~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~~~~~dyl~~~LTG~~~~~d~s~As~tgl~d~~~~~W- 231 (400)
.++ ..++++++||+++++.++++||+||++|+||+|+|+++|++++|||.|+|||+.+ +|+|+||+|++|| ++++|
T Consensus 141 ~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe~~~~~~~~l~~~dyl~~~LTG~~~-~d~s~As~t~l~d-~~~~W~ 218 (572)
T 3jvp_A 141 MAEKRGEAFLPRYGGKISSEWMIAKVWQILDEAEDVYNRTDQFLEATDWIVSQMTGKIV-KNSCTAGYKAIWH-KREGYP 218 (572)
T ss_dssp HHHHHTCTTGGGGTTCCCSSSHHHHHHHHHHHHHHHHHHCSEEEEHHHHHHHHHHSSCC-EEHHHHHHHSCCB-TTTBSC
T ss_pred hccccHHHHHHHhCCCCCchhHHHHHHHHHHhCHHHHHHhheEecHHHHHHHHhcCCce-eehhhccccceeC-CCCCcC
Confidence 642 0256789999999999999999999999999999999999999999999999997 9999999999999 99999
Q ss_pred cHHHHHHcCC-----chhhhc-CCcccCCccccccCHHHHHHcCCCCCCeEEecCCchHHhhhcccCCCCCcEEEEeccc
Q 015802 232 SKIVLEATAP-----SLEEKL-GKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTS 305 (400)
Q Consensus 232 ~~~~l~~~g~-----~~~~~L-P~l~~~~~~~G~l~~~~a~~lGL~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs 305 (400)
|+++|+.+|+ + +++| |+++++++++|+|++++|+++||++|+||++|++|++|+++|+|++++|++++++|||
T Consensus 219 ~~ell~~~g~~l~~i~-~~~L~p~i~~~~~~~G~l~~~~A~~~GL~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs 297 (572)
T 3jvp_A 219 SNEFFKALDPRLEHLT-TTKLRGDIVPLGERAGGLLPEMAEKMGLNPGIAVAVGNVDAHAAVPAVGVTTPGKLVMAMGTS 297 (572)
T ss_dssp CHHHHHTTCGGGTTST-TTTTCSCEECTTSEEEECCHHHHHHHTSCTTCEEECCEETTTTHHHHTTCCSSEEEEEEESSS
T ss_pred CHHHHHHhCcccccCC-HhHCCCccCCcCccccccCHHHHHHhCCCCCCeEEEeCchHHHHHhhCCCCCCCcEEEEecch
Confidence 9999999983 3 4566 8999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeecCCCCCCCCce-eecCCCCCCceEEEEEEecchhHHHHHHHHhcC------------ccHHHHHHHHhcCCCCC
Q 015802 306 DTVFGITDDPEPRLEGH-VFPNPVDTKGYMIMLVYKNASLTREDVRNRCAE------------KSWDVFNKYLQQTPPLN 372 (400)
Q Consensus 306 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~~~~W~~~~~~~------------~~~~~l~~~a~~~~~g~ 372 (400)
+++..+++++...+... .+.....++.|.++++++++|.+++||++++.. +.|++|++++++++|++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~~~g~~~~~~l~~~a~~~~~g~ 377 (572)
T 3jvp_A 298 ICHMLLGEKEQEVEGMCGVVEDGIIPGYLGYEAGQSAVGDIFAWFVKHGVSAATFDEAQEKGVNVHALLEEKASQLRPGE 377 (572)
T ss_dssp EEEEEEESSCCCCTTCSEEEETSSSTTSEEEEEEESCSHHHHHHHHHHTSBHHHHHHHHHTTBCHHHHHHHHHTSSCTTS
T ss_pred hheeeecCCCccCCCceeeccCccCCCcEEEeehhhhHHHHHHHHHHhccchhhHHHHHhcCCCHHHHHHHHHHhCCCCC
Confidence 99988888765444321 222223589999999999999999999999853 24889999999999999
Q ss_pred CCeEEEeccCCCCCCCCC
Q 015802 373 GGKMGFYYKEHEILPPLP 390 (400)
Q Consensus 373 ~gl~~~P~l~G~r~P~~~ 390 (400)
+|++|+|||.|+|+|+|.
T Consensus 378 ~gl~~lP~~~Ger~P~~d 395 (572)
T 3jvp_A 378 SGLLALDWWNGNRSILVD 395 (572)
T ss_dssp SCCEEECCTTCCCTTTCC
T ss_pred CCeEeCCccCCCCCCCCC
Confidence 999999999999999984
No 8
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=100.00 E-value=3.9e-66 Score=535.29 Aligned_cols=341 Identities=16% Similarity=0.176 Sum_probs=306.3
Q ss_pred CCceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhc--
Q 015802 8 KDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS-- 85 (400)
Q Consensus 8 ~~~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 85 (400)
+++|+||||+||||+|++++|.+|+++++.+.+++..+|++| |.||||+ +||++++++++++.+.
T Consensus 1 ~~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g---~~e~dp~----------~~~~~~~~~i~~~~~~~~ 67 (510)
T 2p3r_A 1 EKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPG---WVEHDPM----------EIWATQSSTLVEVLAKAD 67 (510)
T ss_dssp CCCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCSSTT---CCEECHH----------HHHHHHHHHHHHHHHHTT
T ss_pred CCcEEEEEEcCCcceEEEEECCCCCEEEEEEEecccccCCCC---cEEECHH----------HHHHHHHHHHHHHHHHcC
Confidence 467999999999999999999999999999999998888764 6888888 9999999999998764
Q ss_pred CCCCCEeEEEeecccceeeEecCC-CccccccCCCCCCccccccccCCCCCCccccCCChHHHHHHHHHHhCChHHHHHH
Q 015802 86 LDLSKVTAVSGSGQQHGSVYWKKG-SATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKL 164 (400)
Q Consensus 86 ~~~~~I~aIgis~~~~~~v~~d~~-g~~~~~~~~~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~ 164 (400)
.++.+|.+|||++|||++++||++ |+| ++|+|+|+|+|+.++++++++.. ..++++++
T Consensus 68 ~~~~~I~~Igis~~~~~~v~~D~~~G~~--------------------l~~~i~W~D~R~~~~~~~l~~~~-~~~~~~~~ 126 (510)
T 2p3r_A 68 ISSDQIAAIGITNQRETTIVWEKETGKP--------------------IYNAIVWQCRRTAEICEHLKRDG-LEDYIRSN 126 (510)
T ss_dssp CCGGGEEEEEEEECSSCBEEEETTTCCB--------------------SSCEECTTCCTTHHHHHHHHHTT-CHHHHHHH
T ss_pred CChhheEEEEEeCCcCcEEEEECCCCeE--------------------CcccccccCccHHHHHHHHHhcc-cHHHHHHH
Confidence 556789999999999999999998 997 68999999999999999999874 46789999
Q ss_pred hCCCCCCCChHHHHHHHhhcCchhHHhccc----ccchhhHHHHHHhC--CceeeccchhccccccccCCCCccHHHHHH
Q 015802 165 TGSRGYERFTGPQIRKLFQTQPGVYDDTER----ISVVSSFMASLLIG--AYACIDETDAAGMNLMDIRQRVWSKIVLEA 238 (400)
Q Consensus 165 tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~----~~~~~dyl~~~LTG--~~~~~d~s~As~tgl~d~~~~~W~~~~l~~ 238 (400)
||+++++.++++||+|+++|+||+|+|+++ |++++|||.|+||| +.+ +|+|+||+|+|||+++++|++++|+.
T Consensus 127 tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~~~l~~~~~dyl~~~LTG~~~~~-td~s~As~t~l~d~~~~~W~~~ll~~ 205 (510)
T 2p3r_A 127 TGLVIDPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTWLIWKMTQGRVHV-TDYTNASRTMLFNIHTLDWDDKMLEV 205 (510)
T ss_dssp HCCCSSTTSHHHHHHHHHHHSTTHHHHHHTTCEEEECHHHHHHHHHTTTSCCE-EEHHHHHTTSSEETTTTEECHHHHHH
T ss_pred hCCCCCcccHHHHHHHHHHcCHHHHHHHhcCCeEecCHHHHHHHHhcCCCeEE-eehhHhhhhccccCccCCCCHHHHHH
Confidence 999999999999999999999999999998 77899999999999 676 99999999999999999999999999
Q ss_pred cCCchhhhcCCcccCCccccccCHHHHHHcCCCCCCeEEecCCchHHhhhcccCCCCCcEEEEecccceeeeec-CCCCC
Q 015802 239 TAPSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGIT-DDPEP 317 (400)
Q Consensus 239 ~g~~~~~~LP~l~~~~~~~G~l~~~~a~~lGL~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~-~~~~~ 317 (400)
+|++ +++||+++++++++|.+++ +.+| ++|+||++|++|++|+++|+|++++|++++++|||+++...+ +++..
T Consensus 206 ~gi~-~~~LP~i~~~~~~~G~~~~---~~lG-~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~ 280 (510)
T 2p3r_A 206 LDIP-REMLPEVRRSSEVYGQTNI---DGKG-GTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVK 280 (510)
T ss_dssp HTCC-GGGCCEEECSEEEEEEECT---TCTT-SCCEEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTCCCC
T ss_pred hCCC-HHHCCceecCCCceeeech---hhcC-CCCCeEEEECchHHHHHHhcCCCCCCcEEEeecchheeEEecCCcccc
Confidence 9988 8999999999999999976 4577 999999999999999999999999999999999999876666 45554
Q ss_pred CCCc--eeecCCCC-CCceEEEEEEecchhHHHHHHHHhcC-ccHHHHHHHHhcCCCCCCCeEEEeccCCCCCCCC
Q 015802 318 RLEG--HVFPNPVD-TKGYMIMLVYKNASLTREDVRNRCAE-KSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPL 389 (400)
Q Consensus 318 ~~~~--~~~~~~~~-~~~~~~~~~~~~~G~~~~W~~~~~~~-~~~~~l~~~a~~~~~g~~gl~~~P~l~G~r~P~~ 389 (400)
++.. ..+++... ++.|..+++++++|.+++|+++.+.. .+|+++++++++++ +++|++|+|||.|+|+|+|
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~-~~~gl~~~P~~~G~r~P~~ 355 (510)
T 2p3r_A 281 SENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLINDAYDSEYFATKVQ-NTNGVYVVPAFTGLGAPYW 355 (510)
T ss_dssp CSSSCEEEEEECTTSCEEEEEEEEESCSHHHHHHHHHTSCCCCSSSCHHHHHTTSS-SCTTCEEECCTTCCBTTTC
T ss_pred CCCCeeEEEeeecCCCceEEEccchhhHHHHHHHHHHHccCCCcHHHHHHHHhhCC-CCCceEEeCcccCCCCCCC
Confidence 4433 24555432 35899999999999999999999854 46888999998875 6899999999999999997
No 9
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=100.00 E-value=7.8e-66 Score=532.64 Aligned_cols=340 Identities=14% Similarity=0.157 Sum_probs=305.9
Q ss_pred CCceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhc--
Q 015802 8 KDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS-- 85 (400)
Q Consensus 8 ~~~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 85 (400)
+++|+||||+||||+|++++|.+|+++++.+.+++..+|++ ||.||||+ +||++++++++++.+.
T Consensus 3 ~~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~---g~~e~dp~----------~~~~~~~~~i~~~~~~~~ 69 (506)
T 3h3n_X 3 EKNYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYFPKS---GWVEHNAN----------EIWNSVQSVIAGAFIESG 69 (506)
T ss_dssp CCCEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCBCSST---TCCEECHH----------HHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEEcCCCceEEEEECCCCCEEEEEEEecCccCCCC---CcEEECHH----------HHHHHHHHHHHHHHHHcC
Confidence 36799999999999999999999999999999998877776 46888888 9999999999998764
Q ss_pred CCCCCEeEEEeecccceeeEecCC-CccccccCCCCCCccccccccCCCCCCccccCCChHHHHHHHHHHhCChHHHHHH
Q 015802 86 LDLSKVTAVSGSGQQHGSVYWKKG-SATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKL 164 (400)
Q Consensus 86 ~~~~~I~aIgis~~~~~~v~~d~~-g~~~~~~~~~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~ 164 (400)
.++.+|.+|||++|+|++++||++ |+| ++|+|+|+|+|+.++++++++.. ..++++++
T Consensus 70 ~~~~~I~~Igis~~~~~~v~~D~~~G~~--------------------l~~~i~w~D~R~~~~~~~l~~~~-~~~~~~~~ 128 (506)
T 3h3n_X 70 IRPEAIAGIGITNQRETTVVWDKTTGQP--------------------IANAIVWQSRQSSPIADQLKVDG-HTEMIHEK 128 (506)
T ss_dssp CCGGGEEEEEEEECSSCBEEEETTTCCB--------------------SSCEECTTCCTTHHHHHHHHHTT-CHHHHHHH
T ss_pred CChhheEEEEeeCCcccEEEEeCCCCeE--------------------CCCceEecCcchHHHHHHHHhcc-CHHHHHHH
Confidence 566889999999999999999998 998 68999999999999999999874 56889999
Q ss_pred hCCCCCCCChHHHHHHHhhcCchhHHhccc----ccchhhHHHHHHhC--CceeeccchhccccccccCCCCccHHHHHH
Q 015802 165 TGSRGYERFTGPQIRKLFQTQPGVYDDTER----ISVVSSFMASLLIG--AYACIDETDAAGMNLMDIRQRVWSKIVLEA 238 (400)
Q Consensus 165 tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~----~~~~~dyl~~~LTG--~~~~~d~s~As~tgl~d~~~~~W~~~~l~~ 238 (400)
||+++++.++++||+||++|+||+|+++++ |++++|||.|+||| +.+ +|+|+||+|+|||+++++|++++|+.
T Consensus 129 tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~~~~~~~~~dyl~~~LTG~~~~~-td~s~As~t~l~d~~~~~W~~~ll~~ 207 (506)
T 3h3n_X 129 TGLVIDAYFSATKVRWLLDNIEGAQEKADNGELLFGTIDSWLVWKLTDGQVHV-TDYSNASRTMLYNIHKLEWDQEILDL 207 (506)
T ss_dssp HSCCCCTTSHHHHHHHHHHHSTTHHHHHHTTCEEEECHHHHHHHHHTTTSCCE-EEHHHHHTTTSEETTTTEECHHHHHH
T ss_pred hCCCCCchhHHHHHHHHHHhCHHHHHHHhcCCeEEecHHHHHHHHhcCCceee-eEHHHhhhhhCeecCCCCcCHHHHHH
Confidence 999999999999999999999999999987 77899999999999 556 99999999999999999999999999
Q ss_pred cCCchhhhcCCcccCCccccccCHHHHHHcCCCCCCeEEecCCchHHhhhcccCCCCCcEEEEecccceeeeecC-CCCC
Q 015802 239 TAPSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITD-DPEP 317 (400)
Q Consensus 239 ~g~~~~~~LP~l~~~~~~~G~l~~~~a~~lGL~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~-~~~~ 317 (400)
+|++ +++||+++++++++|++++++ ++| .|+||++|++|++|+++|+|++++|++++++|||+++...++ ++..
T Consensus 208 ~gi~-~~~LP~i~~~~~~~G~~~~~~--~lg--~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~ 282 (506)
T 3h3n_X 208 LNIP-SSMLPEVKSNSEVYGHTRSYR--FYG--SEVPIAGMAGDQQAALFGQMAFEKGMIKNTYGTGAFIVMNTGEEPQL 282 (506)
T ss_dssp TTCC-GGGCCEEECSEEEEEECCGGG--TTT--CCCEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEEEETCCCS
T ss_pred cCcC-HHHCCceecCCCcceeeChHH--hcC--CCCeEEEECCcHHHHHHhCCCCCCCcEEEEecchheeeeecCCcccc
Confidence 9988 899999999999999999887 466 799999999999999999999999999999999998777765 4444
Q ss_pred CCC--ceeecCCCCCC--ceEEEEEEecchhHHHHHHHHhcC-ccHHHHHHHHhcCCCCCCCeEEEeccCCCCCCCC
Q 015802 318 RLE--GHVFPNPVDTK--GYMIMLVYKNASLTREDVRNRCAE-KSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPL 389 (400)
Q Consensus 318 ~~~--~~~~~~~~~~~--~~~~~~~~~~~G~~~~W~~~~~~~-~~~~~l~~~a~~~~~g~~gl~~~P~l~G~r~P~~ 389 (400)
... ...+++.+ ++ .|..+++++++|.+++|+++.+.. .+|+++++++++++++ +|++|+|||+|+|+|+|
T Consensus 283 ~~~~~~~~~~~~~-~g~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~-~gl~~~P~~~Ger~P~~ 357 (506)
T 3h3n_X 283 SDNDLLTTIGYGI-NGKVYYALEGSIFVAGSAIQWLRDGLRMIETSPQSEELAAKAKGD-NEVYVVPAFTGLGAPYW 357 (506)
T ss_dssp CCTTSEEEEEEEE-TTEEEEEEEEEECCSSHHHHHHHHTSCCCSSTTHHHHHHTTCCSC-SCCEEECCTTCBCTTTC
T ss_pred CCCceEEEeeeec-CCCCEEEEecchhhHHHHHHHHHHHcCCCCcHHHHHHHHhcCCCC-CceEEeccccCCCCCcc
Confidence 332 23455544 44 699999999999999999999863 5789999999988765 99999999999999997
No 10
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.9e-65 Score=531.14 Aligned_cols=342 Identities=19% Similarity=0.209 Sum_probs=302.1
Q ss_pred CCCCceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhc
Q 015802 6 LPKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS 85 (400)
Q Consensus 6 ~~~~~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (400)
-|-++|+||||+|||++|++++|.+|+++++.+.+++..+|.+ ||.||||+ +||+++.++++++.+.
T Consensus 22 ~MM~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~---g~~e~dp~----------~~~~~i~~~i~~~~~~ 88 (520)
T 4e1j_A 22 SMMGGYILAIDQGTTSTRAIVFDGNQKIAGVGQKEFKQHFPKS---GWVEHDPE----------EIWQTVVSTVKEAIEK 88 (520)
T ss_dssp CCCSCEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSST---TCCEECHH----------HHHHHHHHHHHHHHHT
T ss_pred HHhhCeEEEEEeCCcceEEEEECCCCCEEEEEEEecccccCCC---CcEEECHH----------HHHHHHHHHHHHHHHh
Confidence 3445799999999999999999999999999999998888876 46888888 9999999999998764
Q ss_pred --CCCCCEeEEEeecccceeeEec-CCCccccccCCCCCCccccccccCCCCCCccccCCChHHHHHHHHHHhCChHHHH
Q 015802 86 --LDLSKVTAVSGSGQQHGSVYWK-KGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELS 162 (400)
Q Consensus 86 --~~~~~I~aIgis~~~~~~v~~d-~~g~~~~~~~~~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~~~~~~~~~~~~ 162 (400)
.++.+|.+|||++|++++|+|| ++|+| ++|+|+|+|+|+.++++++++.. ..++++
T Consensus 89 ~~~~~~~I~~Igis~~g~~~v~~D~~~G~~--------------------l~~~i~W~D~R~~~~~~~l~~~~-~~~~~~ 147 (520)
T 4e1j_A 89 SGITANDIAAIGITNQRETVVVWDRETGKP--------------------IHNAIVWQDRRTAAFCDKLKKKG-LEKTFV 147 (520)
T ss_dssp TTCCGGGEEEEEEEECSSCEEEEETTTCCB--------------------SSCEECTTCCTTHHHHHHHHHTT-CHHHHH
T ss_pred cCCCcccEEEEEEeCCcceEEEEECCCCeE--------------------CccccccccCCHHHHHHHHHhcc-cHHHHH
Confidence 4567899999999999999999 69998 68999999999999999999874 567899
Q ss_pred HHhCCCCCCCChHHHHHHHhhcCchhHHhccc----ccchhhHHHHHHhCC--ceeeccchhccccccccCCCCccHHHH
Q 015802 163 KLTGSRGYERFTGPQIRKLFQTQPGVYDDTER----ISVVSSFMASLLIGA--YACIDETDAAGMNLMDIRQRVWSKIVL 236 (400)
Q Consensus 163 ~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~----~~~~~dyl~~~LTG~--~~~~d~s~As~tgl~d~~~~~W~~~~l 236 (400)
++||+++++.++++||+|+++|+||+|+|+++ |++++|||.|+|||+ .+ +|+|+||+|+|||+++++|++++|
T Consensus 148 ~~tG~~~~~~~~~~kl~Wl~~~~Pe~~~~~~~~~~~~~~~~dyl~~~LTG~~~~~-td~s~As~t~l~d~~~~~W~~~ll 226 (520)
T 4e1j_A 148 KKTGLLLDPYFSGTKLNWLLSNVKGAQVRAAKGELCFGTIDTFLIWRLTGGECFC-TDATNASRTLLYNIAENAWDDELT 226 (520)
T ss_dssp HHHSSCSSTTSHHHHHHHHHHHSTTHHHHHHTTCEEEEEHHHHHHHHHTTTCCCE-EEHHHHTTSSSEETTTTEECHHHH
T ss_pred HHHCCCCCchhHHHHHHHHHHcChHHHHHHhcCCeEecCHHHHHHHHhcCCCeee-ecHHHhhhhcccccccCCCCHHHH
Confidence 99999999999999999999999999999986 667999999999996 55 999999999999999999999999
Q ss_pred HHcCCchhhhcCCcccCCccccccCHHHHHHcCCCCCCeEEecCCchHHhhhcccCCCCCcEEEEecccceeeeec-CCC
Q 015802 237 EATAPSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGIT-DDP 315 (400)
Q Consensus 237 ~~~g~~~~~~LP~l~~~~~~~G~l~~~~a~~lGL~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~-~~~ 315 (400)
+.+|++ +++||+++++++++|.++++ ||++|+||++|++|++|+++|+|++++|++++++|||+++.+.+ +++
T Consensus 227 ~~~gi~-~~~LP~i~~~~~~~G~~~~~-----~l~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~ 300 (520)
T 4e1j_A 227 EVLRVP-KEMLPEVKDCAADFGVTDPS-----LFGAAIPILGVAGDQQAATIGQACFKPGMLKSTYGTGCFALLNTGKDM 300 (520)
T ss_dssp HHHTCC-GGGSCEEECSBSCCCBCCHH-----HHTSCCBEEEECCHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTCC
T ss_pred HHcCCC-HHHCCceecCCCceeeeChh-----hCCCCCeEEEECCcHHHHHHhCCCCCCCcEEEEecCchheEEecCCcc
Confidence 999988 89999999999999999874 46789999999999999999999999999999999999988887 566
Q ss_pred CCCCCc--eeecCCCC-CCceEEEEEEecchhHHHHHHHHhcC-ccHHHHHHHHhcCCCCCCCeEEEeccCCCCCCCC
Q 015802 316 EPRLEG--HVFPNPVD-TKGYMIMLVYKNASLTREDVRNRCAE-KSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPL 389 (400)
Q Consensus 316 ~~~~~~--~~~~~~~~-~~~~~~~~~~~~~G~~~~W~~~~~~~-~~~~~l~~~a~~~~~g~~gl~~~P~l~G~r~P~~ 389 (400)
..++.. ..+++.+. ++.|..+++++++|.+++|+++.+.. .+|+++++++++++ +++|++|+|||+|+|+|+|
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~-~~~gl~~lP~l~Ger~P~~ 377 (520)
T 4e1j_A 301 VRSKNRLLTTIAYRLDGETTYALEGSIFVAGAAVQWLRDGLKVIKAAPDTGSLAESAD-PSQEVYLVPAFTGLGAPHW 377 (520)
T ss_dssp CCCSSSCEEEEEEEETTEEEEEEEEEESCSHHHHHHHHHTTCCC-----CHHHHHTSC-TTCCCEEECCTTCBCTTTC
T ss_pred ccCCCceeeEEeEecCCCceEEEcchHhhHHHHHHHHHHHcCCcccHHHHHHHHhcCC-CCCcEEEEcCccCCCCCCC
Confidence 654433 23455432 24799999999999999999999864 46889999998875 8999999999999999997
No 11
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=100.00 E-value=1.9e-65 Score=529.20 Aligned_cols=338 Identities=16% Similarity=0.213 Sum_probs=304.7
Q ss_pred ceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhc--CC
Q 015802 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--LD 87 (400)
Q Consensus 10 ~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~ 87 (400)
+|+||||+|||++|++++|.+|+++++.+++++..+|++| +.||||+ +||++++++++++.+. .+
T Consensus 6 ~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g---~~e~d~~----------~~~~~~~~~i~~~~~~~~~~ 72 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFNQKGEIAGVAQREFKQYFPQSG---WVEHDAN----------EIWTSVLAVMTEVINENDVR 72 (501)
T ss_dssp CEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTT---CCEECHH----------HHHHHHHHHHHHHHHTTTCC
T ss_pred cEEEEEEeCccceEEEEEcCCCCEEEEEEeecccccCCCC---cEEECHH----------HHHHHHHHHHHHHHHhcCCC
Confidence 5999999999999999999999999999999988777764 6888888 9999999999998764 45
Q ss_pred CCCEeEEEeecccceeeEecCC-CccccccCCCCCCccccccccCCCCCCccccCCChHHHHHHHHHHhCChHHHHHHhC
Q 015802 88 LSKVTAVSGSGQQHGSVYWKKG-SATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTG 166 (400)
Q Consensus 88 ~~~I~aIgis~~~~~~v~~d~~-g~~~~~~~~~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~tG 166 (400)
+.+|.+|||++|+|++++||++ |+| ++|+|+|+|+|+.++++++++.. ..++++++||
T Consensus 73 ~~~I~~Igis~~~~~~v~~D~~~G~~--------------------l~~~i~w~D~R~~~~~~~l~~~~-~~~~~~~~tG 131 (501)
T 3g25_A 73 ADQIAGIGITNQRETTVVWDKHTGRP--------------------IYHAIVWQSRQTQSICSELKQQG-YEQTFRDKTG 131 (501)
T ss_dssp GGGEEEEEEEECSSCEEEEETTTCCB--------------------SSCEECTTCCTTHHHHHHHHHTT-CHHHHHHHHS
T ss_pred cccEEEEEEECCcCcEEEEECCCCeE--------------------CCCceeeccCChHHHHHHHHhcc-CHHHHHHHHC
Confidence 6789999999999999999998 997 68999999999999999999874 5688999999
Q ss_pred CCCCCCChHHHHHHHhhcCchhHHhccc----ccchhhHHHHHHhC--CceeeccchhccccccccCCCCccHHHHHHcC
Q 015802 167 SRGYERFTGPQIRKLFQTQPGVYDDTER----ISVVSSFMASLLIG--AYACIDETDAAGMNLMDIRQRVWSKIVLEATA 240 (400)
Q Consensus 167 ~~~~~~~~~~kl~Wl~~~~pe~~~~~~~----~~~~~dyl~~~LTG--~~~~~d~s~As~tgl~d~~~~~W~~~~l~~~g 240 (400)
+++++.++++||+|+++|+||+|+|+++ |++++|||.|+||| +.+ +|+|+||+|++||+++++|++++|+.+|
T Consensus 132 ~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~l~~~~~dyl~~~LTG~~~~~-td~s~As~t~l~d~~~~~W~~~ll~~~g 210 (501)
T 3g25_A 132 LLLDPYFAGTKVKWILDNVEGAREKAENGDLLFGTIDTWLVWKLSGKAAHI-TDYSNASRTLMFNIHDLEWDDELLELLT 210 (501)
T ss_dssp CCSSTTSHHHHHHHHHHHSTTHHHHHHTTCEEEEEHHHHHHHHHTTTSCCE-EEHHHHTTSSSEETTTTEECHHHHHHHT
T ss_pred CCCCchhHHHHHHHHHHhCHHHHHHHhcCCeEEecHHHHHHHHhcCCCeee-eeHHHhhcccCeeCCCCCCCHHHHHHhC
Confidence 9999999999999999999999999998 77899999999999 666 9999999999999999999999999999
Q ss_pred CchhhhcCCcccCCccccccCHHHHHHcCCCCCCeEEecCCchHHhhhcccCCCCCcEEEEecccceeeeecC-CCCCCC
Q 015802 241 PSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITD-DPEPRL 319 (400)
Q Consensus 241 ~~~~~~LP~l~~~~~~~G~l~~~~a~~lGL~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~-~~~~~~ 319 (400)
++ +++||+++++++++|+++++. ++| .|+||++|++|++|+++|+|++++|++++++|||+++.+.++ ++..++
T Consensus 211 i~-~~~LP~i~~~~~~~G~~~~~~--~~g--~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~ 285 (501)
T 3g25_A 211 VP-KNMLPEVKASSEVYGKTIDYH--FYG--QEVPIAGVAGDQQAALFGQACFERGDVKNTYGTGGFMLMNTGDKAVKSE 285 (501)
T ss_dssp CC-GGGCCEEECSEEEEEECCGGG--TTT--CCCEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSCCCCS
T ss_pred cC-HHHCCceecCCCceeccchHH--hCC--CCCeEEEECccHHHHHHhCCCCCCCcEEEEccchhheeeecCCccccCC
Confidence 88 899999999999999999864 455 899999999999999999999999999999999999887775 454443
Q ss_pred Cc--eeecCCCCCC--ceEEEEEEecchhHHHHHHHHhcC-ccHHHHHHHHhcCCCCCCCeEEEeccCCCCCCCC
Q 015802 320 EG--HVFPNPVDTK--GYMIMLVYKNASLTREDVRNRCAE-KSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPL 389 (400)
Q Consensus 320 ~~--~~~~~~~~~~--~~~~~~~~~~~G~~~~W~~~~~~~-~~~~~l~~~a~~~~~g~~gl~~~P~l~G~r~P~~ 389 (400)
.. ..++|.+ ++ .|..+++++++|.+++|+++.+.. .+|++++++++++++ .+|++|+|||.|+|+|+|
T Consensus 286 ~~~~~~~~~~~-~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~-~~gl~~~P~~~G~r~P~~ 358 (501)
T 3g25_A 286 SGLLTTIAYGI-DGKVNYALEGSIFVSGSAIQWLRDGLRMINSAPQSESYATRVDS-TEGVYVVPAFVGLGTPYW 358 (501)
T ss_dssp SSCEEEEEEEE-TTEEEEEEEEEESCSTHHHHHHHHTSCCCSSGGGHHHHHTTSSC-CTTCEEECCTTCBCTTTC
T ss_pred CCeEEEeeEec-CCccEEEEecccccHHHHHHHHHHHcCCCCcHHHHHHHHhhCCC-CCeEEEecccccCCCCCC
Confidence 32 3456543 44 799999999999999999999864 578999999998876 489999999999999987
No 12
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=100.00 E-value=5.4e-65 Score=528.67 Aligned_cols=344 Identities=17% Similarity=0.170 Sum_probs=301.2
Q ss_pred CCceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhc--
Q 015802 8 KDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS-- 85 (400)
Q Consensus 8 ~~~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 85 (400)
+++|+||||+||||+|++|||.+|++++.++.+++..+|+|| |+||||+ +||++++++++++++.
T Consensus 2 ekkYvlgID~GTss~Ka~l~d~~G~~va~~~~~~~~~~p~~G---~~Eqdp~----------~~w~~~~~~i~~~l~~~~ 68 (526)
T 3ezw_A 2 EKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPG---WVEHDPM----------EIWATQSSTLVEVLAKAD 68 (526)
T ss_dssp -CCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCSSTT---CCEECHH----------HHHHHHHHHHHHHHHHHT
T ss_pred CceEEEEEEccccceeeeEEcCCCCEEEEEEEecCcccCCCC---cEEECHH----------HHHHHHHHHHHHHHHHcC
Confidence 578999999999999999999999999999999998888874 6899998 9999999999998764
Q ss_pred CCCCCEeEEEeecccceeeEecCC-CccccccCCCCCCccccccccCCCCCCccccCCChHHHHHHHHHHhCChHHHHHH
Q 015802 86 LDLSKVTAVSGSGQQHGSVYWKKG-SATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKL 164 (400)
Q Consensus 86 ~~~~~I~aIgis~~~~~~v~~d~~-g~~~~~~~~~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~ 164 (400)
+++++|++||||+||+++|+||++ |+| ++|+|+|+|+|+.++++++++.. ..+.++++
T Consensus 69 ~~~~~I~aIgis~q~~~~v~~D~~~G~p--------------------l~~ai~W~D~R~~~~~~~l~~~~-~~~~i~~~ 127 (526)
T 3ezw_A 69 ISSDQIAAIGITNQRETTIVWEKETGKP--------------------IYNAIVWQCRRTAEICEHLKRDG-LEDYIRSN 127 (526)
T ss_dssp CCGGGEEEEEEEECSSCBEEEETTTCCB--------------------SSCEECTTCCTTHHHHHHHHHTT-CHHHHHHH
T ss_pred CChhhEEEEEEeCCCCCEEEEECCCCeE--------------------cccceecCCcchHHHHHHHHhhc-cHHHHHHH
Confidence 678899999999999999999974 998 69999999999999999999874 56789999
Q ss_pred hCCCCCCCChHHHHHHHhhcCchhHHhccc----ccchhhHHHHHHhC-CceeeccchhccccccccCCCCccHHHHHHc
Q 015802 165 TGSRGYERFTGPQIRKLFQTQPGVYDDTER----ISVVSSFMASLLIG-AYACIDETDAAGMNLMDIRQRVWSKIVLEAT 239 (400)
Q Consensus 165 tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~----~~~~~dyl~~~LTG-~~~~~d~s~As~tgl~d~~~~~W~~~~l~~~ 239 (400)
||+++++.++++||+|+++|+|++++++++ +..+.+||.|+||| +..++|+|+||+|++||+++++|++++++.+
T Consensus 128 tG~~~~~~~~~~kl~Wl~~~~p~~~~~~~~~~~~~~~i~~~L~~~Lt~g~~~~td~s~As~t~l~d~~~~~w~~~ll~~~ 207 (526)
T 3ezw_A 128 TGLVIDPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVL 207 (526)
T ss_dssp HCCCSSTTSHHHHHHHHHHHSTTHHHHHHTTCEEEECHHHHHHHHHTTTSCCEEEHHHHTTSSSEETTTTEECHHHHHHH
T ss_pred hCCCCCcccHHHHHHHHHHcCchHHHHHHHhhhhccchhHHHhhhhcCCCceEEEchhhccccCcCccccCcCHHHHHHc
Confidence 999999999999999999999999999998 44578899999996 3334999999999999999999999999999
Q ss_pred CCchhhhcCCcccCCccccccCHHHHHHcCCCCCCeEEecCCchHHhhhcccCCCCCcEEEEecccceeeeecCCCCCCC
Q 015802 240 APSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITDDPEPRL 319 (400)
Q Consensus 240 g~~~~~~LP~l~~~~~~~G~l~~~~a~~lGL~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~ 319 (400)
|++ +++||+++++++++|.++++++. ..|+||++|++|++|+++|+|++++|++.+++|||+++.+.++++....
T Consensus 208 gi~-~~~LP~i~~~~~~~G~~~~~~~~----~~gipV~~g~gD~~aa~~G~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~ 282 (526)
T 3ezw_A 208 DIP-REMLPEVRRSSEVYGQTNIDGKG----GTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKS 282 (526)
T ss_dssp TCC-GGGCCEEECSEEEEEEECTTCTT----SCCEEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSCCCC
T ss_pred CCC-HHHCCCccccccccCccchhhhc----CCCCcEEEEcchHHHHhhhccccccceeEEEeccCeeEecccCCccccc
Confidence 988 89999999999999999987654 4578999999999999999999999999999999999999998776544
Q ss_pred C--cee--ecCCCCCCceEEEEEEecchhHHHHHHHHhcCccHHHHHHHHhcCCCCCCCeEEEeccCCCCCCCCC
Q 015802 320 E--GHV--FPNPVDTKGYMIMLVYKNASLTREDVRNRCAEKSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLP 390 (400)
Q Consensus 320 ~--~~~--~~~~~~~~~~~~~~~~~~~G~~~~W~~~~~~~~~~~~l~~~a~~~~~g~~gl~~~P~l~G~r~P~~~ 390 (400)
. ... .+.+..++.|.++++++++|.+++||++.+.........+.+...+++++|++|+|||+|+|+|+|.
T Consensus 283 ~~~~~~~~~~~~~~~~~y~~eg~~~~~G~~~~Wl~~~~~~~~~~~~~~~~~~~~~~~~gl~~lP~~~G~r~P~~d 357 (526)
T 3ezw_A 283 ENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWD 357 (526)
T ss_dssp SSSCEEEEEECTTSCEEEEEEEEESCSHHHHHHHHHTSCCCCSSSCHHHHHTTSSSCTTCEEECCTTCBCTTTCB
T ss_pred cccceeeeeeccCCcceeeeHHHHHHHHHHHHHHHHHhccccchhHHHHHHhccCCCCCeEEeCCCCCCCCCCCC
Confidence 2 222 2222235679999999999999999999986433333344455567799999999999999999873
No 13
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=100.00 E-value=4e-64 Score=518.93 Aligned_cols=336 Identities=18% Similarity=0.204 Sum_probs=306.1
Q ss_pred ceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhc--CC
Q 015802 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--LD 87 (400)
Q Consensus 10 ~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~ 87 (400)
+++||||+|||++|++++|.+|+++++.+.+++..+|++ ||.||||+ +||+++.++++++.+. .+
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~~g~~~~~~~~~~~~~~p~~---g~~e~d~~----------~~~~~~~~~i~~~~~~~~~~ 69 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDRESNIHGIGQYEFPQHYPRP---GWVEHNPE----------EIWDAQLRAIKDAIQSARIE 69 (497)
T ss_dssp CEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCCST---TCCEECHH----------HHHHHHHHHHHHHHHHHTCC
T ss_pred cEEEEEecCCchhEEEEECCCCCEEEEEEeccceecCCC---CcEEECHH----------HHHHHHHHHHHHHHHhcCCC
Confidence 589999999999999999999999999999998777776 46888888 9999999999998764 55
Q ss_pred CCCEeEEEeecccceeeEecCCCccccccCCCCCCccccccccCCCCCCccccCCChHHHHHHHHHHhCChHHHHHHhCC
Q 015802 88 LSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGS 167 (400)
Q Consensus 88 ~~~I~aIgis~~~~~~v~~d~~g~~~~~~~~~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~tG~ 167 (400)
..+|++|||++|+|++++||++|+| ++|.|+|+|.|+.++++++++. ..++++++||+
T Consensus 70 ~~~i~~Igis~~~~~~v~~D~~G~~--------------------l~~~i~w~D~R~~~~~~~l~~~--~~~~~~~~tG~ 127 (497)
T 2zf5_O 70 PNQIAAIGVTNQRETTLVWDKDGKP--------------------LYNAIVWQCRRTAEMVEEIKRE--YGTMIKEKTGL 127 (497)
T ss_dssp GGGEEEEEEEECSSCEEEECTTCCB--------------------SSCEECTTCCTTHHHHHHHHHH--HHHHHHHHHSS
T ss_pred cccEEEEEEecCCCcEEEECCCCCC--------------------cccceeecccCcHHHHHHHHhh--hHHHHHHHhCC
Confidence 6789999999999999999999998 6899999999999999999886 24789999999
Q ss_pred CCCCCChHHHHHHHhhcCchhHHhccc----ccchhhHHHHHHhCCceeeccchhccccccccCCCCccHHHHHHcCCch
Q 015802 168 RGYERFTGPQIRKLFQTQPGVYDDTER----ISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSL 243 (400)
Q Consensus 168 ~~~~~~~~~kl~Wl~~~~pe~~~~~~~----~~~~~dyl~~~LTG~~~~~d~s~As~tgl~d~~~~~W~~~~l~~~g~~~ 243 (400)
++++.++++||+|+++|+|++|+|+++ |++++|||.|+|||+.+ +|+|+||+|++||+++++|++++++.+|++
T Consensus 128 ~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~l~~~LTG~~~-td~s~As~t~l~d~~~~~W~~~ll~~~gi~- 205 (497)
T 2zf5_O 128 VPDAYFSASKLKWLLDNVPGLREKAEKGEVMFGTVDTFLIYRLTGEHV-TDYSNASRTMLFNIKKLDWDDELLELFDIP- 205 (497)
T ss_dssp CCCTTSHHHHHHHHHHHSTTHHHHHHTTCCEEEEHHHHHHHHHHSCCE-EEHHHHTTSSSEETTTTEECHHHHHHTTCC-
T ss_pred CCCchhHHHHHHHHHHcCHHHHHHHhcCCCEEEcHHHHHHHHHhCCee-eeHHHhhhhcCccCCCCCcCHHHHHHcCcC-
Confidence 999999999999999999999999998 88999999999999987 999999999999999999999999999988
Q ss_pred hhhcCCcccCCccccccCHHHHHHcCCCCCCeEEecCCchHHhhhcccCCCCCcEEEEecccceeeeecCCCCCCCC--c
Q 015802 244 EEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITDDPEPRLE--G 321 (400)
Q Consensus 244 ~~~LP~l~~~~~~~G~l~~~~a~~lGL~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~--~ 321 (400)
.++||+++++++++|+++++ .+| .|+||++|++|++|+++|+|++++|++++++|||+++.+++++|..++. .
T Consensus 206 ~~~lP~i~~~~~~~G~~~~~---~~g--~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~ 280 (497)
T 2zf5_O 206 ESVLPEVRESSEVYGYTKKE---LLG--AEIPVSGDAGDQQAALFGQAAFEAGMVKATYGTGSFILVNTDKMVLYSDNLL 280 (497)
T ss_dssp GGGCCEEECSEEEEEECCHH---HHS--SCCEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEEEETCCCCCTTSE
T ss_pred HHHCCCcCCCCCeeeecCHH---HcC--CCCeEEEEccHHHHHHHhCCCCCCCcEEEEcchhheeeEECCCCccCCCCcE
Confidence 89999999999999999987 588 8999999999999999999999999999999999999999988765542 2
Q ss_pred eeecCCCCCC--ceEEEEEEecchhHHHHHHHHhc-CccHHHHHHHHhcCCCCCCCeEEEeccCCCCCCCC
Q 015802 322 HVFPNPVDTK--GYMIMLVYKNASLTREDVRNRCA-EKSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPL 389 (400)
Q Consensus 322 ~~~~~~~~~~--~~~~~~~~~~~G~~~~W~~~~~~-~~~~~~l~~~a~~~~~g~~gl~~~P~l~G~r~P~~ 389 (400)
..++|.. ++ .|+.+++++++|.+++|+++.+. ..+|++|++++++++ +++|++|+|||.|+|+|+|
T Consensus 281 ~~~~~~~-~~~~~~~~~g~~~~~G~~~~w~~~~~~~~~~~~~l~~~a~~~~-~~~gl~~~P~~~G~r~P~~ 349 (497)
T 2zf5_O 281 TTIAWGL-NGRVSYALEGSIFVTGAAVQWLRDGIKIIKHASETEELATKLE-SNEGVYFVPAFVGLGAPYW 349 (497)
T ss_dssp EEEEEEE-TTEEEEEEEEEESCSHHHHHHHHHTSCCCSCGGGHHHHHTTSS-SCTTCEEECCTTCBCTTTC
T ss_pred EEEEEEc-CCCCEEEEechhhhHHHHHHHHHHHhCCCCcHHHHHHHHhhCC-CCCceEEecCcCCCCCCCC
Confidence 3456643 33 79999999999999999999875 356888999998876 6899999999999999987
No 14
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=100.00 E-value=3.5e-64 Score=525.60 Aligned_cols=348 Identities=15% Similarity=0.143 Sum_probs=304.3
Q ss_pred CCceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhc--
Q 015802 8 KDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS-- 85 (400)
Q Consensus 8 ~~~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 85 (400)
.++|+||||+||||+|++++|.+|+++++.+.+++..+|++ ||+||||+ +||++++++++++.+.
T Consensus 3 ~~~~~lgIDiGtts~ka~l~d~~G~il~~~~~~~~~~~p~~---g~~eqdp~----------~~~~~~~~~i~~~~~~~~ 69 (554)
T 3l0q_A 3 LASYFIGVDVGTGSARAGVFDLQGRMVGQASREITMFKPKA---DFVEQSSE----------NIWQAVCNAVRDAVNQAD 69 (554)
T ss_dssp -CCEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCEEEET---TEEEECHH----------HHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEEEECcccEEEEEECCCCCEEEEEEEecccccCCC---CccccCHH----------HHHHHHHHHHHHHHHHcC
Confidence 35799999999999999999999999999999998777776 47899998 9999999999998764
Q ss_pred CCCCCEeEEEeecccceeeEecCCCccccccCCCC-CCccccccccCCCCCCccccCCChHHHHHHHHHHhCChHHHHHH
Q 015802 86 LDLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPK-KPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKL 164 (400)
Q Consensus 86 ~~~~~I~aIgis~~~~~~v~~d~~g~~~~~~~~~~-~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~ 164 (400)
.++.+|.+|||++| +++|+||++|+|+. ++++ .| .+|+|+|+|+|+.++++++++. + ++++++
T Consensus 70 ~~~~~I~~Igis~~-~~~v~~D~~G~pl~--~~~~~~~----------~~~ai~W~D~Ra~~~~~~l~~~-~--~~~~~~ 133 (554)
T 3l0q_A 70 INPIQVKGLGFDAT-CSLVVLDKEGNPLT--VSPSGRN----------EQNVIVWMDHRAITQAERINAT-K--HPVLEF 133 (554)
T ss_dssp CCGGGEEEEEEEEC-SCEEEEETTSCBCC--CSTTCCT----------TCCEECTTCCTTHHHHHHHHHH-T--CGGGGG
T ss_pred CCHhHEEEEEEcCC-CceEEECCCCCEee--ccCCCCC----------CCCcEEecccchHHHHHHHHHh-H--HHHHHH
Confidence 56689999999998 89999999999842 2211 12 3899999999999999999986 2 568899
Q ss_pred hCCCCCCCChHHHHHHHhhcCchhHHhcccccchhhHHHHHHhCCceeeccchhccccc--cccCCCCccHHHHHHcCCc
Q 015802 165 TGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNL--MDIRQRVWSKIVLEATAPS 242 (400)
Q Consensus 165 tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~~~~~dyl~~~LTG~~~~~d~s~As~tgl--~d~~~~~W~~~~l~~~g~~ 242 (400)
||+++++.++++||+||++|+||+|+|+++|++++|||.|+|||+.. +|++|.+++ ||+++++|++++|+.+|++
T Consensus 134 tG~~~~~~~~~~Kl~Wl~~~~Pe~~~~~~~~~~~~dyl~~~LTG~~~---~s~as~t~~~~~d~~~~~W~~~ll~~~gi~ 210 (554)
T 3l0q_A 134 VGGVISPEMQTPKLLWLKQHMPNTWSNVGHLFDLPDFLTWRATKDET---RSLCSTVCKWTYLGHEDRWDPSYFKLVGLA 210 (554)
T ss_dssp BTTCCCTTSHHHHHHHHHHHCHHHHHHEEEEEEHHHHHHHHHHSCCC---EEHHHHHHHSCCBTTTTBCCHHHHHHHTCG
T ss_pred hCCCCChhhHHHHHHHHHHhChHHHHHhceEEcHHHHHHHHHhCCcc---ccccchhhccccccccCCCCHHHHHHcCCc
Confidence 99999999999999999999999999999999999999999999864 466666654 7889999999999999975
Q ss_pred hh------hhcC-CcccCCcccc-ccCHHHHHHcCCCCCCeEEecCCchHHhhhcc-cCC-CCC-------cEEEEeccc
Q 015802 243 LE------EKLG-KLAPAHAVAG-CIAPYFVERFHFNKNCLVVQWSGDNPNSLAGL-TLS-TSG-------DLAISLGTS 305 (400)
Q Consensus 243 ~~------~~LP-~l~~~~~~~G-~l~~~~a~~lGL~~g~pV~~g~~D~~aa~~g~-g~~-~~g-------~~~~s~GTs 305 (400)
. ++|| +++++++++| +|++++|+++||++||||++|++|++|+++|+ |+. ++| ++++++|||
T Consensus 211 -~~~~~~~~~Lp~~i~~~~~~~G~~lt~~~A~~~GL~~g~pV~~g~gD~~aa~lg~~G~~~~~G~~~~~~~~~~~~~GTs 289 (554)
T 3l0q_A 211 -DLLDNNAAKIGATVKPMGAPLGHGLSQRAASEMGLIPGTAVSVSIIDAHAGTIGILGASGVTGENANFDRRIALIGGTS 289 (554)
T ss_dssp -GGGHHHHTTTCSCEECTTCBCTTSSCHHHHHHHTCCTTCEEBCCEEHHHHHHHHHTTCCCTTSCCCCTTTEEEEECSSS
T ss_pred -cccchhHHhCCCcccCCcCeeCcccCHHHHHHhCCCCCCeEEEeChHHHhHHhhccccccCCCccccccceEEEEecch
Confidence 3 2899 6999999999 89999999999999999999999999999996 776 788 789999999
Q ss_pred ceeeeecCCCCCCCCcee--ecCCCCCCceEEEEEEecchhHHHHHHHHhc-------------CccHHHHHHHHhcCCC
Q 015802 306 DTVFGITDDPEPRLEGHV--FPNPVDTKGYMIMLVYKNASLTREDVRNRCA-------------EKSWDVFNKYLQQTPP 370 (400)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~G~~~~W~~~~~~-------------~~~~~~l~~~a~~~~~ 370 (400)
+++.++++++..++.... +++. .++.|+.+++++++|.+++|+++.+. .+.|+.|+++++++++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~~~~ 368 (554)
T 3l0q_A 290 TAHMAMSRSAHFISGIWGPYYSAI-LPEYWLNEGGQSATGALIDHIIQSHPCYPALLEQAKNKGETIYEALNYILRQMAG 368 (554)
T ss_dssp EEEEEEESSCCCCTTSEEEEETSS-STTCEEEEEEESCSHHHHHHHHHTSTTHHHHHHHHHHTTCCHHHHHHHHHHHHHS
T ss_pred heeeeecCCccccCCcceeecccc-cCCceEecchhhhhHHHHHHHHHhcccchHHHHHHHhcCCCHHHHHHHHHHhcCC
Confidence 999999998887765432 3443 48899999999999999999999863 2358889988888877
Q ss_pred C-------CCCeEEEeccCCCCCCCC
Q 015802 371 L-------NGGKMGFYYKEHEILPPL 389 (400)
Q Consensus 371 g-------~~gl~~~P~l~G~r~P~~ 389 (400)
+ ++|++|+|||+|+|+|+|
T Consensus 369 ~~~~~~~~~~gl~flP~~~Ger~P~~ 394 (554)
T 3l0q_A 369 EPENIAFLTNDIHMLPYFHGNRSPRA 394 (554)
T ss_dssp SGGGGGGGGTTCCEECCTTCBCSSSC
T ss_pred CCCccccccCceEEcccccCCCCCCC
Confidence 6 799999999999999987
No 15
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=1.1e-63 Score=515.53 Aligned_cols=336 Identities=18% Similarity=0.183 Sum_probs=302.9
Q ss_pred ceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhc--CC
Q 015802 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--LD 87 (400)
Q Consensus 10 ~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~ 87 (400)
+++||||+|||++|++++|.+|+++++.+.+++..+|.+ |+.||||+ +||+.+.++++++.+. .+
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~~g~i~~~~~~~~~~~~p~~---g~~e~d~~----------~~~~~i~~~i~~~~~~~~~~ 68 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTLEGRPVAVAKREFRQLYPKP---GWVEHDPL----------EIWETTLWAAREVLRRAGAE 68 (495)
T ss_dssp -CEEEEEECSSEEEEEEECTTSCEEEEEEEECCEECSST---TCCEECHH----------HHHHHHHHHHHHHHHHTTCC
T ss_pred cEEEEEeeCCcceEEEEECCCCCEEEEEEEeeceecCCC---CcEeeCHH----------HHHHHHHHHHHHHHHhcCCC
Confidence 479999999999999999999999999999998777776 46888888 9999999999998764 45
Q ss_pred CCCEeEEEeecccceeeEecCC-CccccccCCCCCCccccccccCCCCCCccccCCChHHHHHHHHHHhCChHHHHHHhC
Q 015802 88 LSKVTAVSGSGQQHGSVYWKKG-SATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTG 166 (400)
Q Consensus 88 ~~~I~aIgis~~~~~~v~~d~~-g~~~~~~~~~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~tG 166 (400)
..+|.+|||++|+|++++||++ |+| ++|.|+|+|.|+.++++++++. +..++++++||
T Consensus 69 ~~~i~~Igis~~~~~~~~vD~~~G~~--------------------l~~~i~w~D~R~~~~~~~l~~~-~~~~~~~~~tG 127 (495)
T 2dpn_A 69 AGEVLALGITNQRETTLLWDRKTGKP--------------------LHNAIVWQDRRTTPLCEALRAK-GLEPLFRERTG 127 (495)
T ss_dssp GGGCCEEEEEECSSCBEEEETTTCCB--------------------SSCEECTTCCTTHHHHHHHHHT-TCHHHHHHHTS
T ss_pred cccEEEEEEeCCCccEEEEECCCCcC--------------------CccceeecccChHHHHHHHHhc-cchhHHHHHhC
Confidence 6789999999999999999998 987 5889999999999999999876 34578999999
Q ss_pred CCCCCCChHHHHHHHhhcCchhHHhccc----ccchhhHHHHHHhC--CceeeccchhccccccccCCCCccHHHHHHcC
Q 015802 167 SRGYERFTGPQIRKLFQTQPGVYDDTER----ISVVSSFMASLLIG--AYACIDETDAAGMNLMDIRQRVWSKIVLEATA 240 (400)
Q Consensus 167 ~~~~~~~~~~kl~Wl~~~~pe~~~~~~~----~~~~~dyl~~~LTG--~~~~~d~s~As~tgl~d~~~~~W~~~~l~~~g 240 (400)
+++++.++++||+|+++|+|++|+|+++ |++++|||.|+||| +.+ +|+|+||+|++||+++++|++++++.+|
T Consensus 128 ~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~l~~~LTG~~~~~-~d~s~As~t~l~d~~~~~W~~~ll~~~g 206 (495)
T 2dpn_A 128 LLFDPYFSGTKLVWLLENVPGLKARAEGGGVAFGTVDTWLIWNLTGGKVHA-TDPTNASRTLLFNLHTLAWDPELLEALG 206 (495)
T ss_dssp CCSCTTSHHHHHHHHHHHSSSHHHHHHHTCEEEECHHHHHHHHHTTTSCCE-ECHHHHTTSSSEETTTTEECHHHHHHTT
T ss_pred CCCCchhHHHHHHHHHHcCHHHHHHHhcCCcEEECHHHHHHHHhcCCCeEE-EehHHhHhhcCccCccCCcCHHHHHHcC
Confidence 9999999999999999999999999998 99999999999999 776 9999999999999999999999999999
Q ss_pred CchhhhcCCcccCCccccccCHHHHHHcCCCCCCeEEecCCchHHhhhcccCCCCCcEEEEecccceeeeecC-CCCCCC
Q 015802 241 PSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITD-DPEPRL 319 (400)
Q Consensus 241 ~~~~~~LP~l~~~~~~~G~l~~~~a~~lGL~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~-~~~~~~ 319 (400)
++ +++||+++++++++|+++++ .+| +|+||++|++|++|+++|+|+.++|++++++|||+++.+.++ ++..++
T Consensus 207 i~-~~~lP~i~~~~~~~G~~~~~---~~G--~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~ 280 (495)
T 2dpn_A 207 IP-AALLPEVRPSDGDFGETLPE---LLG--APVPIRGVLGDQQAALFGQAALGGGEGKCTYGTGAFLLLNTGKRPVLSE 280 (495)
T ss_dssp CC-STTCCEECCTTSCCCBCCHH---HHS--SCCBEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSCCCCS
T ss_pred CC-HHHCCCccCCCCeeEeccHH---HcC--CCCeEEEECcHHHHHHHhCCCCCCCcEEEEccHhhhhhhhcCCccccCC
Confidence 87 89999999999999999987 588 899999999999999999999999999999999999999986 466544
Q ss_pred C--ceeecCCCCCC--ceEEEEEEecchhHHHHHHHHhc-CccHHHHHHHHhcCCCCCCCeEEEeccCCCCCCCC
Q 015802 320 E--GHVFPNPVDTK--GYMIMLVYKNASLTREDVRNRCA-EKSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPL 389 (400)
Q Consensus 320 ~--~~~~~~~~~~~--~~~~~~~~~~~G~~~~W~~~~~~-~~~~~~l~~~a~~~~~g~~gl~~~P~l~G~r~P~~ 389 (400)
. ...++|.+ ++ .|..+++++++|.+++|+++ +. ..+|++|++++++++ +++|++|+|||.|+|+|+|
T Consensus 281 ~~~~~~~~~~~-~~~~~~~~~g~~~~~g~~~~w~~~-~~~~~~~~~l~~~a~~~~-~~~gl~~~P~~~G~r~P~~ 352 (495)
T 2dpn_A 281 KGLLATVAWSL-GGRATYALEGSLFVAGAAVGWLKE-VGLIRESAEVEALAASVE-DTGDVYFVPAFTGLGAPYW 352 (495)
T ss_dssp SSCEEEEEEEE-TTEEEEEEEEEESCSHHHHHHHHH-TTSSSSTTTHHHHHHTCS-CCSSCEEECCTTCBCTTTC
T ss_pred CCceEEEEEEc-CCCCEEEEechHHhHHHHHHHHHH-cCCccCHHHHHHHHhhCC-CCCcEEEecCCCCCCCCCC
Confidence 2 23456643 44 79999999999999999999 64 356889999998886 6899999999999999987
No 16
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=100.00 E-value=4.7e-63 Score=511.64 Aligned_cols=337 Identities=17% Similarity=0.145 Sum_probs=303.4
Q ss_pred ceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhc----
Q 015802 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS---- 85 (400)
Q Consensus 10 ~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~---- 85 (400)
+++||||+|||++|++++|.+|+++++.+.+++...|++ ||.||||+ +||+.+.++++++.+.
T Consensus 4 ~~~lgIDiGtT~~k~~l~d~~g~i~~~~~~~~~~~~~~~---g~~e~d~~----------~~~~~i~~~i~~~~~~~~~~ 70 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYDEELNIVHSNNLNHEQKCLKP---GWYEHDPI----------EIMTNLYNLMNEGIKVLKDK 70 (503)
T ss_dssp EEEEEEEECSSEEEEEEEETTCCEEEEEEEECCCBCCST---TCCEECHH----------HHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEEeCCcceEEEEECCCCCEEEEEEEeeeeecCCC---CcEEECHH----------HHHHHHHHHHHHHHHHhhcC
Confidence 589999999999999999999999999999998777776 46888888 9999999999987652
Q ss_pred CCCCCEeEEEeecccceeeEecCC-CccccccCCCCCCccccccccCCCCCCccccCCChHHHHHHHHHHhCChHHHHHH
Q 015802 86 LDLSKVTAVSGSGQQHGSVYWKKG-SATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKL 164 (400)
Q Consensus 86 ~~~~~I~aIgis~~~~~~v~~d~~-g~~~~~~~~~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~ 164 (400)
.+..+|.+|||++|+|++++||++ |+| ++|.|+|+|.|+.++++++++. +..++++++
T Consensus 71 ~~~~~i~~Igis~~~~~~~~~D~~~G~~--------------------l~~~i~w~D~r~~~~~~~l~~~-~~~~~~~~~ 129 (503)
T 2w40_A 71 YTSVIIKCIGITNQRETVIIWDRITGKP--------------------LYNAIVWLDTRVEELVTEFSAK-YNNNDIQKK 129 (503)
T ss_dssp SSSCEEEEEEEEECSSCEEEEETTTCCB--------------------SSCEECTTCCTTHHHHHHHHHH-SCHHHHHHH
T ss_pred CCccceEEEEEcCCcceEEEEECCCCcC--------------------CccceeecccCcHHHHHHHHhc-cchHHHHHH
Confidence 345789999999999999999998 987 5889999999999999999887 446789999
Q ss_pred hCCCCCCCChHHHHHHHhhcCchhHHhccc----ccchhhHHHHHHhC-CceeeccchhccccccccCCCCccHHHHHHc
Q 015802 165 TGSRGYERFTGPQIRKLFQTQPGVYDDTER----ISVVSSFMASLLIG-AYACIDETDAAGMNLMDIRQRVWSKIVLEAT 239 (400)
Q Consensus 165 tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~----~~~~~dyl~~~LTG-~~~~~d~s~As~tgl~d~~~~~W~~~~l~~~ 239 (400)
||+++++.++++||+|+++|+||+|+|+++ |++++|||.|+||| +.+ +|+|+||+|++||+++++|++++++.+
T Consensus 130 tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~l~~~LTG~~~~-~d~s~As~t~l~d~~~~~W~~~ll~~~ 208 (503)
T 2w40_A 130 TGTYFNTYFSAFKILWLIQNNPEIKQKIDDGTAVIGNINTWLIFNLTKGNCY-TDVTNASRTLLMDINTLQWDEKMCKIF 208 (503)
T ss_dssp HSSCCCSSSHHHHHHHHHHHCHHHHHHHHTTCEEEEEHHHHHHHHHHTSCCE-EEHHHHTTTTCBCTTTCSBCHHHHHHT
T ss_pred hCCCCCcccHHHHHHHHHHhChHHHHHHhcCCeEEECHHHHHHHHHcCCCcc-ccHHHhhhhcCccCCCCccCHHHHHHc
Confidence 999999999999999999999999999999 99999999999999 476 999999999999999999999999999
Q ss_pred CCchhhhcCCcccCCccccccCHHHHHHcCCCC--CCeEEecCCchHHhhhcccCCCCCcEEEEecccceeeeecC-CCC
Q 015802 240 APSLEEKLGKLAPAHAVAGCIAPYFVERFHFNK--NCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITD-DPE 316 (400)
Q Consensus 240 g~~~~~~LP~l~~~~~~~G~l~~~~a~~lGL~~--g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~-~~~ 316 (400)
|++.+++||+++++++++|+++++ .+| + |+||++|++|++|+++|+|+.++|++++++|||+++.++++ +|.
T Consensus 209 gi~~~~~lP~i~~~~~~~G~~~~~---~~g--~~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~ 283 (503)
T 2w40_A 209 NITNMSVLPEIKSNCSNFGLVKSE---HVP--DYLNIPITGCIGDQQSACIGQAIFDEGEAKCTYGTGVFLLINTGEKVV 283 (503)
T ss_dssp TCCCGGGSCEEECSEEEEEECCCT---TSG--GGTTCEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSCC
T ss_pred CCChHHHCCCccCCcCceeeccHH---HcC--CCCCceEEEECchHHHHHHhCCCCCCCcEEEEechhheeeeecCCccc
Confidence 964247899999999999999987 577 7 99999999999999999999999999999999999999996 566
Q ss_pred CCC--CceeecCCCCCC----ceEEEEEEecchhHHHHHHHHhc-CccHHHHHHHHhcCCCCCCCeEEEeccCCCCCCCC
Q 015802 317 PRL--EGHVFPNPVDTK----GYMIMLVYKNASLTREDVRNRCA-EKSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPL 389 (400)
Q Consensus 317 ~~~--~~~~~~~~~~~~----~~~~~~~~~~~G~~~~W~~~~~~-~~~~~~l~~~a~~~~~g~~gl~~~P~l~G~r~P~~ 389 (400)
.++ ....++|.+ ++ .|..+++++++|.+++|+++ +. ..+|++|++++++++ +++|++|+|||.|+|+|+|
T Consensus 284 ~~~~~~~~~~~~~~-~g~~~~~~~~~g~~~~~g~~~~w~~~-~~~~~~~~~l~~~a~~~~-~~~gl~~~P~~~G~r~P~~ 360 (503)
T 2w40_A 284 YSTCGLITTICYKF-NDNDKPKYALEGSIGTAGSGVSWLLK-NKLIDDPSEASDIMEKCE-NTTGVIFVPAFSGLYAPRW 360 (503)
T ss_dssp CCSSSCEEEEEECC-STTSCCEEEEEEEESCSHHHHHHHHH-TTSSSCGGGHHHHHHHCC-SCTTCEEECCTTCBCTTTC
T ss_pred cCCCCceeEEEeec-CCCCCceEEEechhhhhHhHHHHHHH-hCCcCCHHHHHHHHhhCC-CCCCEEEecCCCCCCCCCC
Confidence 554 334566653 44 89999999999999999999 64 356889999999886 6999999999999999987
No 17
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=7.5e-64 Score=513.78 Aligned_cols=336 Identities=15% Similarity=0.063 Sum_probs=285.4
Q ss_pred CceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhcCCC
Q 015802 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDL 88 (400)
Q Consensus 9 ~~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 88 (400)
++|+||||+||||+|++++|.+|+++++.+.+++. .+.+ ||.||||+ +||+++.++++++. .
T Consensus 5 m~~~lgIDiGTts~Ka~l~d~~G~i~~~~~~~~~~-~~~~---g~~eqdp~----------~~~~~~~~~i~~~~-~--- 66 (482)
T 3h6e_A 5 TGATIVIDLGKTLSKVSLWDLDGRMLDRQVRPSIP-LEID---GIRRLDAP----------DTGRWLLDVLSRYA-D--- 66 (482)
T ss_dssp ---CEEEEECSSEEEEEEECTTSCEEEEEEEECCC-EESS---SCEECCHH----------HHHHHHHHHHHHTT-T---
T ss_pred hceEEEEEcCCCCeEEEEEECCCcEEEEEEecCCc-ccCC---CceeECHH----------HHHHHHHHHHHHHH-h---
Confidence 56899999999999999999999999999999975 3554 46888888 99999999999876 2
Q ss_pred CCEeEEEeecccceeeEecCCCccccccCCCCCCccccccccCCCCCCccccCCChHHHHHHHHHHhCChHHHHHHhCCC
Q 015802 89 SKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSR 168 (400)
Q Consensus 89 ~~I~aIgis~~~~~~v~~d~~g~~~~~~~~~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~tG~~ 168 (400)
.+|++|||++|++++|+|| +|+| ++|+|+|+|+|+.++++++++..+ .+++||++
T Consensus 67 ~~I~aIgis~~~~~~v~~D-~G~p--------------------l~~ai~w~D~R~~~~~~~l~~~~~----~~~~tG~~ 121 (482)
T 3h6e_A 67 HPVTTIVPVGHGAGIAALT-DGRL--------------------AFPPLDYEQSIPEAVMADYRSQRD----PFARTGSP 121 (482)
T ss_dssp SCCCEEEEEECSSCEEEEE-TTEE--------------------CSCCBCTTSCCCHHHHHHHHTTCC----CHHHHCCC
T ss_pred cCCCEEEEecCcCCEEEEC-CCCE--------------------eccccccCCcccHHHHHHHHhhCh----HHHHhCCC
Confidence 5899999999999999999 9998 699999999999999999987642 27999999
Q ss_pred CCCC--ChHHHHHHHhhcCchhHHhcccccchhhHHHHHHhCCceeeccch-hccccccccCCCCccHHHHHHcCCchhh
Q 015802 169 GYER--FTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETD-AAGMNLMDIRQRVWSKIVLEATAPSLEE 245 (400)
Q Consensus 169 ~~~~--~~~~kl~Wl~~~~pe~~~~~~~~~~~~dyl~~~LTG~~~~~d~s~-As~tgl~d~~~~~W~~~~l~~~g~~~~~ 245 (400)
++++ ++++||+|+++|+||+|+|++ |++++|||.|+|||+.+ +|+|+ ||+|+|||+++++|+ ++++.+|++ +
T Consensus 122 ~~~~~~~~~~kl~Wl~~~~Pe~~~~~~-~l~~~dyl~~~LTG~~~-td~s~~As~t~l~d~~~~~W~-~ll~~~gi~--~ 196 (482)
T 3h6e_A 122 ALPDGLNIGSQLWWLDQLHPDVMANAT-LLPWAQYWAWFLTGRAV-SEVTSLGCHSDLWDPQDGDFS-PMAKRLGWA--A 196 (482)
T ss_dssp CCSTTSSHHHHHHHHHHHSHHHHHSCE-EEEHHHHHHHHTTSCCC-EEHHHHTTTCSSEETTTTEEC-HHHHHTTCG--G
T ss_pred CCCCchhHHHHHHHHHHcCchhhhcCE-EEccHHHHHHHHhCCee-eecchhhhccCCccCCcCcHH-HHHHHcCCH--H
Confidence 9998 899999999999999999999 99999999999999987 99997 899999999999999 599999995 8
Q ss_pred hcCCcccCCccccccCHHHHHHcCCCCCCeEEecCCchHHhhhc---ccCCCCCc-EEEEecccceeeeecC---C-CCC
Q 015802 246 KLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAG---LTLSTSGD-LAISLGTSDTVFGITD---D-PEP 317 (400)
Q Consensus 246 ~LP~l~~~~~~~G~l~~~~a~~lGL~~g~pV~~g~~D~~aa~~g---~g~~~~g~-~~~s~GTs~~~~~~~~---~-~~~ 317 (400)
+||+++++++++|++++++|+++||++|+||++|++|++|+++| +|++++|+ +++++|||.++..+.+ + +..
T Consensus 197 ~LP~v~~~~~~~G~l~~~~A~~~GL~~g~pV~~g~~D~~aa~lG~~g~g~~~~g~~~~~s~GT~~~~~~~~~~~~~~~~~ 276 (482)
T 3h6e_A 197 RFAPIVRAGDTVGALLPAIAERTGLSPDVQVLAGLHDSNAALLAARGFAEIADNEATVLSTGTWFIAMRLPATPVDTATL 276 (482)
T ss_dssp GBCCEECTTSEEEECCHHHHHHHTCCTTCEEECCEEHHHHHHHHHTTSTTTTTSSEEEEECSSSEEEEEECSSCCCGGGC
T ss_pred hCCCCcCCCceeeeeCHHHHHHhCCCCCCEEEEeCcHHHHHHhhhhccCCcCCCCEEEEECCceeEEEEecCccCCcccc
Confidence 99999999999999999999999999999999999999999999 99999997 5899999988666655 3 333
Q ss_pred CCCceeecCCCCCCceEEEEEEecchhHHHHHHHHhc--C---ccHHHHHHHHhcCCCCCCCeEEEeccCCCCCCCCCCC
Q 015802 318 RLEGHVFPNPVDTKGYMIMLVYKNASLTREDVRNRCA--E---KSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLPGV 392 (400)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~W~~~~~~--~---~~~~~l~~~a~~~~~g~~gl~~~P~l~G~r~P~~~~~ 392 (400)
++....+++. ....|...+...++|.+++|+++... . .++. +..++.++++++|++|+|||+|+|+|+|-..
T Consensus 277 ~~~~~~~~~~-~~~~~~~~g~~~~~G~~~~w~~~~~~~~~~~~~~~~--~~~a~~~~~g~~Gl~flP~l~Ger~P~~d~r 353 (482)
T 3h6e_A 277 PEARDCLVNV-DVHGRPVPSARFMGGREIETLIEIDTRRVDIKPDQP--ALLAAVPEVLRHGRMILPTLMRGFGPYPHGR 353 (482)
T ss_dssp CGGGTEEEEE-CTTSCEEEEEEECHHHHHHHHHCSGGGCTTCGGGHH--HHHHTHHHHHHTTCEEESCSSTTCSSCTTCC
T ss_pred chhhceeecc-ccccccccchhhhhHHHHHHHHHhcccccccccchh--hHHHhccccCCCCeEEecCCCCCCCCCCCCc
Confidence 3332223221 12346677778899999999975442 1 2333 3334445678999999999999999997655
Q ss_pred eee
Q 015802 393 LFH 395 (400)
Q Consensus 393 ~~~ 395 (400)
|.|
T Consensus 354 G~~ 356 (482)
T 3h6e_A 354 FAW 356 (482)
T ss_dssp CEE
T ss_pred eEE
Confidence 665
No 18
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=100.00 E-value=1.7e-63 Score=515.10 Aligned_cols=337 Identities=18% Similarity=0.185 Sum_probs=303.8
Q ss_pred ceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhc--CC
Q 015802 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--LD 87 (400)
Q Consensus 10 ~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~ 87 (400)
+|+||||+|||++|++++|.+|+++++.+.+++..+|++ ||.||||+ +||+.+.++++++.+. .+
T Consensus 2 ~~~lgiDiGtts~k~~l~d~~G~i~~~~~~~~~~~~p~~---g~~e~d~~----------~~~~~i~~~i~~~~~~~~~~ 68 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFDHSGEIYSTGQLEHDQIFPRA---GWVEHNPE----------QIWNNVREVVGLALTRGNLT 68 (504)
T ss_dssp CEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSST---TCCEECHH----------HHHHHHHHHHHHHHHHTTCC
T ss_pred CEEEEEecCCcceEEEEECCCCCEEEEEEEecceecCCC---CceeECHH----------HHHHHHHHHHHHHHHHcCCC
Confidence 489999999999999999999999999999998777776 46888888 9999999999998764 45
Q ss_pred CCCEeEEEeecccceeeEecCC-CccccccCCCCCCccccccccCCCCCCccccCCChHHHHHHHHHHhCChHHHHHHhC
Q 015802 88 LSKVTAVSGSGQQHGSVYWKKG-SATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTG 166 (400)
Q Consensus 88 ~~~I~aIgis~~~~~~v~~d~~-g~~~~~~~~~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~tG 166 (400)
..+|.+|||++|+|++++||++ |+| ++|.|+|+|.|+.++++++++..+ .++++++||
T Consensus 69 ~~~i~~Igis~~g~~~v~vD~~~G~~--------------------l~~~i~w~D~R~~~~~~~l~~~~~-~~~~~~~tG 127 (504)
T 2d4w_A 69 HEDIAAVGITNQRETAVVWDKTTGKP--------------------VYNAIVWQDTRTQKIVDELGGDEG-AEKYKSIVG 127 (504)
T ss_dssp GGGEEEEEEEECSSCBEEEETTTCCB--------------------SSCEECTTCCTTHHHHHHHHCSSC-GGGGHHHHS
T ss_pred cccEEEEEEeCCCCeEEEEECCCCCC--------------------ccccceecccChHHHHHHHHhhcc-hHHHHHHhC
Confidence 6789999999999999999998 987 588999999999999999987553 578999999
Q ss_pred CCCCCCChHHHHHHHhhcCchhHHhccc----ccchhhHHHHHHhC--C---ceeeccchhccccccccCCCCccHHHHH
Q 015802 167 SRGYERFTGPQIRKLFQTQPGVYDDTER----ISVVSSFMASLLIG--A---YACIDETDAAGMNLMDIRQRVWSKIVLE 237 (400)
Q Consensus 167 ~~~~~~~~~~kl~Wl~~~~pe~~~~~~~----~~~~~dyl~~~LTG--~---~~~~d~s~As~tgl~d~~~~~W~~~~l~ 237 (400)
+++++.++++||+|+++|+|++|+|+++ |++++|||.|+||| + .+ +|+|+||+|++||+++++|++++++
T Consensus 128 ~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~l~~~LTG~~~~~~~~-~d~s~As~t~l~d~~~~~W~~~ll~ 206 (504)
T 2d4w_A 128 LPLATYFSGPKIKWILDNVEGAREKAEKGDLLFGNTDTWVLWNMTGGTEGGVHV-TDVTNASRTMLMDLDTLSWREDIAA 206 (504)
T ss_dssp CCSCTTSHHHHHHHHHHHSTTHHHHHHHTCEEEECHHHHHHHHHTTTTTTCCCE-EEHHHHTTTTCEETTTTEECHHHHH
T ss_pred CCCCchhHHHHHHHHHHcChhHHHHHhcCCeEEecHHHHHHHHhcCCCcCCcee-eehhhhhhhcCccCCCCccCHHHHH
Confidence 9999999999999999999999999998 99999999999999 6 76 9999999999999999999999999
Q ss_pred HcCCchhhhcCCcccCCccccccCHHHHHHcCCCCCCeEEecCCchHHhhhcccCCCCCcEEEEecccceeeeecC-CCC
Q 015802 238 ATAPSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITD-DPE 316 (400)
Q Consensus 238 ~~g~~~~~~LP~l~~~~~~~G~l~~~~a~~lGL~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~-~~~ 316 (400)
.+|++ +++||+++++++++|.++++ +.+| + +||++|++|++|+++|+|++++|++++++|||+++.++++ +|.
T Consensus 207 ~~gi~-~~~lP~i~~~~~~~G~~~~~--~~~G--~-~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~ 280 (504)
T 2d4w_A 207 DMGIP-LSMLPDIRSSSEVYGHGRPR--GLVP--G-VPIAGILGDQQAATFGQACFEVGQAKNTYGTGNFLLLNTGTEKV 280 (504)
T ss_dssp HTTCC-GGGSCEEECSEEEEEECCTT--SSST--T-CEEEEEEEHHHHHHHHTTCCSTTEEEEEESSSEEEEEECTTSCC
T ss_pred HhCCC-HHHCCCccCCccceeccchH--HhCC--C-CeEEEECCcHHHHHhhCCCCCCCcEEEEcchhheeeeecCCccc
Confidence 99988 89999999999999999985 3678 6 9999999999999999999999999999999999999996 566
Q ss_pred CCCC--ceeecCCCCCC---ceEEEEEEecchhHHHHHHHHhc-CccHHHHHHHHhcCCCCCCCeEEEeccCCCCCCCC
Q 015802 317 PRLE--GHVFPNPVDTK---GYMIMLVYKNASLTREDVRNRCA-EKSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPL 389 (400)
Q Consensus 317 ~~~~--~~~~~~~~~~~---~~~~~~~~~~~G~~~~W~~~~~~-~~~~~~l~~~a~~~~~g~~gl~~~P~l~G~r~P~~ 389 (400)
.++. ...++|.+ ++ .|..+++++++|.+++|+++.+. ..+|++|++++++++ +++|++|+|||.|+|+|+|
T Consensus 281 ~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~-~~~gl~~~P~~~G~r~P~~ 357 (504)
T 2d4w_A 281 MSKNGLLTTVCYKI-GDAPAVYALEGSIAVTGSLVQWLRDNLGMFEDAPDVEWLAGKVQ-DNGGAYFVPAFSGLFAPYW 357 (504)
T ss_dssp CCSSSCEEEEEECC-TTSCCEEEEEEEESCSHHHHHHHHHTTCTTTTCSCTHHHHTTSS-SCTTCEEECTTCCCSTTTC
T ss_pred cCCCCcEEEEEEEc-CCCCceEEEcchhhhHHHHHHHHHHHhCCCCCHHHHHHHHhhCC-CCCCEEEecCCCCCCCCCC
Confidence 5542 33466653 45 89999999999999999999875 356788999998886 6899999999999999987
No 19
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=100.00 E-value=2.3e-56 Score=460.08 Aligned_cols=322 Identities=14% Similarity=0.047 Sum_probs=272.3
Q ss_pred CCCceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCC----CCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHH
Q 015802 7 PKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSE----LPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKL 82 (400)
Q Consensus 7 ~~~~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~----~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l 82 (400)
|+++++||||+||||+|++++|.+|+++...+.++... .+++ ++.|+|++ +||+++.++++++
T Consensus 1 m~~~~~lgiDiGtts~k~~l~d~~g~~~~~~~~~~~~~~~~~~~~~---g~~e~d~~----------~~~~~i~~~~~~~ 67 (489)
T 2uyt_A 1 MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQN---GYVTWDVD----------SLESAIRLGLNKV 67 (489)
T ss_dssp -CCEEEEEEEECSSEEEEEEEEEEGGGTEEEEEEEEEEECCCEEET---TEEECCHH----------HHHHHHHHHHHHH
T ss_pred CCcceEEEEEecCCCceEEEEEecCccceEEEEEEeecCCCccccC---CeEEECHH----------HHHHHHHHHHHHH
Confidence 78889999999999999999999999988877665321 1222 34555555 9999999999987
Q ss_pred hhcCCCCCEeEEEeecccceeeEecCCCccccccCCCCCCccccccccCCCCCCccccCCChHHHHHHHHHHhCChHHHH
Q 015802 83 SKSLDLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELS 162 (400)
Q Consensus 83 ~~~~~~~~I~aIgis~~~~~~v~~d~~g~~~~~~~~~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~~~~~~~~~~~~ 162 (400)
.. ...+|++|||++|||++++||++|+| ++|.|+|+|.|+.++++++++..+ .++++
T Consensus 68 ~~--~~~~i~~Igis~q~~~~v~~D~~G~~--------------------l~~~i~w~D~R~~~~~~~l~~~~~-~~~~~ 124 (489)
T 2uyt_A 68 CA--AGIAIDSIGIDTWGVDFVLLDQQGQR--------------------VGLPVAYRDSRTNGLMAQAQQQLG-KRDIY 124 (489)
T ss_dssp HH--TTCCCCEEEEEECSSCEEEECTTSCE--------------------ESCCBCTTCGGGTTHHHHHHHHHC-HHHHH
T ss_pred Hh--CCCCceEEEEecCcccEEEECCCCCC--------------------ccCCccccCCccHHHHHHHHHhcC-HHHHH
Confidence 65 24589999999999999999999998 588999999999999999998874 57899
Q ss_pred HHhCCCCCCCChHHHHHHHhhcCchhHHhcccccchhhHHHHHHhCCceeeccchhccccccccCCCCccHHHHHHcCCc
Q 015802 163 KLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPS 242 (400)
Q Consensus 163 ~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~~~~~dyl~~~LTG~~~~~d~s~As~tgl~d~~~~~W~~~~l~~~g~~ 242 (400)
++||+++++.++++||+|+++|+||+|+|++++++++|||.|||||+.+ +|+|+||+|++||+++++|++++|+.+|++
T Consensus 125 ~~tG~~~~~~~~~~kl~Wl~~~~P~~~~~~~~~l~~~dyl~~~LTG~~~-~d~s~As~t~l~d~~~~~W~~~ll~~~gi~ 203 (489)
T 2uyt_A 125 QRSGIQFLPFNTLYQLRALTEQQPELIPHIAHALLMPDYFSYRLTGKMN-WEYTNATTTQLVNINSDDWDESLLAWSGAN 203 (489)
T ss_dssp HHHCCCCCTTSHHHHHHHHHHHCGGGGGGCCEEEEHHHHHHHHHHSCCC-CBHHHHGGGTCEETTTTEECHHHHHHHTCC
T ss_pred HHhCCCCCCccHHHHHHHHHhcCchHHHHhhhccCcHHHHHHHHhCCcc-ceehhhhhhcccccCcCccCHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999987 999999999999999999999999999988
Q ss_pred hhhhcCCcccCCccccccCHHHHHHcCCCCCCeEEe-cCCchHHhhhcccCCCCCcEEEEecccceeeeecCCCCCCCC-
Q 015802 243 LEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQ-WSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITDDPEPRLE- 320 (400)
Q Consensus 243 ~~~~LP~l~~~~~~~G~l~~~~a~~lGL~~g~pV~~-g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~- 320 (400)
.++||+++++++++|+++.. .| +|+||++ |++|++|+++|+|+.++|++++++|||+++.+.++++..+..
T Consensus 204 -~~~lP~i~~~~~~~G~~~~~----~~--~g~pV~~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~ 276 (489)
T 2uyt_A 204 -KAWFGRPTHPGNVIGHWICP----QG--NEIPVVAVASHDTASAVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTA 276 (489)
T ss_dssp -GGGSCCCBCTTCEEEEEECT----TC--CEEEEECCCCBHHHHHHHHSCCCSTTEEEEEESSSEEEEEEESSCCCSHHH
T ss_pred -HHHCCCccCCCcceeeeecc----cC--CCCcEEEECchHHHHHHhcCCCCCCCcEEEEEchHhhcccccCCCccCHHH
Confidence 89999999999999998632 23 7899998 889999999999999999999999999999999888765531
Q ss_pred c--eeecCCCCCCceEEEEEEecchhHHHHHHHHhc----CccHHHHHHHHhcCCCCCCCeEEEe
Q 015802 321 G--HVFPNPVDTKGYMIMLVYKNASLTREDVRNRCA----EKSWDVFNKYLQQTPPLNGGKMGFY 379 (400)
Q Consensus 321 ~--~~~~~~~~~~~~~~~~~~~~~G~~~~W~~~~~~----~~~~~~l~~~a~~~~~g~~gl~~~P 379 (400)
. ..+++...++.|..+++++ + .|+++.+. .+.|+++.+.+ +.+|+++++ |+|
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~-g----~W~~~~~~~~~~~~~~~~l~~~a-~~~~~~~~l-~~p 334 (489)
T 2uyt_A 277 LAANITNEGGAEGRYRVLKNIM-G----LWLLQRVLQERQINDLPALIAAT-QALPACRFI-INP 334 (489)
T ss_dssp HHHTCEEECCGGGCEEEEEEEC-T----THHHHHHHHHTTCCCHHHHHHHH-TTSCSSSSC-CCT
T ss_pred HhhcceeecCCCCeEEEehhHh-H----HHHHHHhhcccchhhHHHHHHHh-ccCCCcCee-ECC
Confidence 1 1122222478899998865 3 58888763 25678887766 566777654 788
No 20
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=98.58 E-value=8e-08 Score=92.61 Aligned_cols=117 Identities=11% Similarity=0.152 Sum_probs=84.7
Q ss_pred ceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhc--CC
Q 015802 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--LD 87 (400)
Q Consensus 10 ~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~ 87 (400)
.++||||+|+|++|++++|.+|+++...+.+++ .+++++ ++++.+.++++++.+. .+
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~il~~~~~~~~-----------~~~~~~----------~~~~~l~~~i~~~~~~~~~~ 64 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGVVQQKWSIETN-----------ILEDGK----------HIVPSIIESIRHRIDLYNMK 64 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEEECC-----------CTTTTT----------THHHHHHHHHHHHHHHTTCC
T ss_pred cEEEEEEECCCEEEEEEECCCCCEEEEEEEcCC-----------CCCCHH----------HHHHHHHHHHHHHHHHcCCC
Confidence 689999999999999999999999988877654 124566 8999999999988764 44
Q ss_pred CCCEeEEEeecccceeeEecCC-Cccc-cccCC-CCC-CccccccccCCCCCCccccCCChHHHHHHHH
Q 015802 88 LSKVTAVSGSGQQHGSVYWKKG-SATI-LSSLD-PKK-PLVDQLGDAFSTKESPVWMDSSTTAQCREIE 152 (400)
Q Consensus 88 ~~~I~aIgis~~~~~~v~~d~~-g~~~-~~~~~-~~~-pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~~ 152 (400)
..+|.+|||+.+ +. +|.+ |..+ .++++ .+. +|.+.|+..|. .|+.+.+|.++....+.+.
T Consensus 65 ~~~i~~igi~~p--G~--vd~~~g~v~~~~~l~w~~~~~l~~~l~~~~~-~pv~v~ND~~aaa~~e~~~ 128 (326)
T 2qm1_A 65 KEDFVGIGMGTP--GS--VDIEKGTVVGAYNLNWTTVQPVKEQIESALG-IPFALDNDANVAALGERWK 128 (326)
T ss_dssp GGGEEEEEEEES--SE--EETTTTEEECBGGGTBCSCBCHHHHHHHHHC-SCEEEEEHHHHHHHHHHHH
T ss_pred ccceeEEEEecc--cc--eeCCCCEEEecCCCCccCCchHHHHHHHHhC-CCEEEecHHHHHHHHHHHh
Confidence 568999999987 33 5654 4332 12343 334 66666666665 4677778887777666553
No 21
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=98.57 E-value=5.3e-08 Score=94.87 Aligned_cols=122 Identities=14% Similarity=0.034 Sum_probs=81.4
Q ss_pred CCCCCCCCceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHH
Q 015802 2 EDYSLPKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQK 81 (400)
Q Consensus 2 ~~~~~~~~~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~ 81 (400)
+-..+++..++||||+|+|++|++++|.+|+++...+.+++ ++++ ++++.+.+++++
T Consensus 22 ~~l~~~~~~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~-------------~~~~----------~~~~~i~~~i~~ 78 (343)
T 2yhw_A 22 ENLYFQGTLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNP-------------KTYE----------ERINLILQMCVE 78 (343)
T ss_dssp ------CEEEEEEEEECSSEEEEEEEETTSCEEEEEEEECC-------------SSHH----------HHHHHHHHHHHH
T ss_pred hheEeCCCcEEEEEEECCCEEEEEEECCCCcEEEEEEEcCC-------------CCHH----------HHHHHHHHHHHH
Confidence 44556667899999999999999999999999987765532 1344 778888888887
Q ss_pred Hhhc--CCCCCEeEEEeecccceeeEecCC-Ccccc-ccC--C-CCCCccccccccCCCCCCccccCCChHHHHHHH
Q 015802 82 LSKS--LDLSKVTAVSGSGQQHGSVYWKKG-SATIL-SSL--D-PKKPLVDQLGDAFSTKESPVWMDSSTTAQCREI 151 (400)
Q Consensus 82 l~~~--~~~~~I~aIgis~~~~~~v~~d~~-g~~~~-~~~--~-~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~ 151 (400)
+.+. ....+|.+|||+.++ ++|.+ |..+. +++ + .+.++.+.|+..|+ .|+.+.+|.++....+.+
T Consensus 79 ~~~~~~~~~~~i~gigi~~pG----~vd~~~g~v~~~~~~~~~w~~~~l~~~l~~~~~-~pv~v~NDa~aaal~E~~ 150 (343)
T 2yhw_A 79 AAAEAVKLNCRILGVGISTGG----RVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLH-LPVWVDNDGNCAALAERK 150 (343)
T ss_dssp HHHHHHHTTEEEEEEEEEESS----EEETTTTEEEECCTTSSSCSSEECHHHHHHHHC-SCEEEEEHHHHHHHHHHH
T ss_pred HHHhcccccCceEEEEEeccc----CEeCCCCEEEeCCcCCCCCcCCCHHHHHHHHHC-CCEEEechhHHHHHHHHH
Confidence 6543 345679999999874 35654 43321 222 2 22356666666665 577888888877766654
No 22
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=98.56 E-value=1.4e-07 Score=94.09 Aligned_cols=120 Identities=12% Similarity=0.114 Sum_probs=85.2
Q ss_pred CCCCC-ceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHh
Q 015802 5 SLPKD-SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLS 83 (400)
Q Consensus 5 ~~~~~-~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (400)
++..+ .++||||+|+|++|++++|.+|+++...+.+++ +++++ .+++.+.++++++.
T Consensus 79 ~~~~~~~~~lgiDiG~t~i~~~l~d~~G~il~~~~~~~~------------~~~~~----------~~~~~l~~~i~~~~ 136 (406)
T 1z6r_A 79 VVETEAWHYLSLRISRGEIFLALRDLSSKLVVEESQELA------------LKDDL----------PLLDRIISHIDQFF 136 (406)
T ss_dssp EECCTTCEEEEEEEETTEEEEEEEETTCCEEEEEEEECC------------SSCSS----------CHHHHHHHHHHHHH
T ss_pred EEcCCccEEEEEEEcCCEEEEEEEcCCCCEEEEEEecCC------------CCCHH----------HHHHHHHHHHHHHH
Confidence 34433 689999999999999999999999988776652 23566 89999999999877
Q ss_pred hc--CCCCCEeEEEeecccceeeEecCC-Cccc-cccC-C-CCCCccccccccCCCCCCccccCCChHHHHHHH
Q 015802 84 KS--LDLSKVTAVSGSGQQHGSVYWKKG-SATI-LSSL-D-PKKPLVDQLGDAFSTKESPVWMDSSTTAQCREI 151 (400)
Q Consensus 84 ~~--~~~~~I~aIgis~~~~~~v~~d~~-g~~~-~~~~-~-~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~ 151 (400)
+. .+..+|.+|||+.++ . +|.+ |..+ .+++ + .+.++.+.|+..|+ .|+.+.||.++....+.+
T Consensus 137 ~~~~~~~~~i~gigi~~pG--~--vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~-~pv~v~NDa~aaalaE~~ 205 (406)
T 1z6r_A 137 IRHQKKLERLTSIAITLPG--I--IDTENGIVHRMPFYEDVKEMPLGEALEQHTG-VPVYIQHDISAWTMAEAL 205 (406)
T ss_dssp HHTGGGCCCEEEEEEEESS--E--EETTTTEEEECTTCTTCSSBCHHHHHHHHHS-SCEEEEEHHHHHHHHHHH
T ss_pred HhcCCCcCceeEEEEEeec--C--EeCCCCEEecCCCCCCccCCCHHHHHHHHHC-CCEEEechhHHHHHHHHH
Confidence 64 456789999999874 2 5654 4332 1233 2 23466666666665 477777887777766554
No 23
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=98.48 E-value=1.7e-07 Score=90.94 Aligned_cols=120 Identities=14% Similarity=0.238 Sum_probs=80.9
Q ss_pred CCCCCCCceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHH
Q 015802 3 DYSLPKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKL 82 (400)
Q Consensus 3 ~~~~~~~~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l 82 (400)
-|++..+.|+||||+|+|++|++++|.+|+++...+.+++. .+++ .+++.+.+.++++
T Consensus 17 ~l~~n~~~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~~------------~~~~----------~~~~~i~~~i~~~ 74 (327)
T 4db3_A 17 NLYFQSNAMYYGFDVGGTKIEFGAFNEKLERVATERVPTPT------------DDYP----------LLLETIAGLVAKY 74 (327)
T ss_dssp CTTSCCSCCEEEEEECSSEEEEEEECTTCCEEEEEEEECCT------------TCHH----------HHHHHHHHHHHHH
T ss_pred eEEECCCcEEEEEEECCCEEEEEEEeCCCcEEEEEEecCCC------------CCHH----------HHHHHHHHHHHHH
Confidence 36788888999999999999999999999999887776541 1455 8888988888887
Q ss_pred hhcCCCCCEeEEEeecccceeeEecC-CCccccccCC--CCCCccccccccCCCCCCccccCCChHHHHHHH
Q 015802 83 SKSLDLSKVTAVSGSGQQHGSVYWKK-GSATILSSLD--PKKPLVDQLGDAFSTKESPVWMDSSTTAQCREI 151 (400)
Q Consensus 83 ~~~~~~~~I~aIgis~~~~~~v~~d~-~g~~~~~~~~--~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~ 151 (400)
.+. ...+.+|||+.+ | ++|. +|....+++. .+.++.+.|+..|+ .|+.+=||.++....|.+
T Consensus 75 ~~~--~~~~~gigi~~p--G--~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~-~pV~v~NDa~aaalgE~~ 139 (327)
T 4db3_A 75 DQE--FACEGKIGLGLP--G--MEDADDATVLTVNVPAAKGKPLRADLEAKIG-RSVKIENDANCFALSEAW 139 (327)
T ss_dssp HHH--HTSCCEEEEEES--E--EECTTTCCEEESSSGGGTTSCHHHHHHHHHS-SCCEEEEHHHHHHHHHHT
T ss_pred HHh--cCCccEEEEEee--c--cEeCCCCEEEcCCCccccCCCHHHHHHHHHC-CCEEEecchhHHHHHHHH
Confidence 653 124778999887 3 3674 4544222332 22355555555554 355555666555554443
No 24
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=98.45 E-value=1.4e-07 Score=91.16 Aligned_cols=112 Identities=21% Similarity=0.198 Sum_probs=81.8
Q ss_pred ceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhcCCCC
Q 015802 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLS 89 (400)
Q Consensus 10 ~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 89 (400)
+|+||||+|+|++|++++|.+|+++...+.+++ .+++ .+++.+.+.++++.+ ..
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~~G~i~~~~~~~~~-------------~~~~----------~~~~~i~~~i~~~~~---~~ 55 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDEEGRILSTFKVATP-------------PTAE----------GIVDAICAAVAGASE---GH 55 (321)
T ss_dssp CEEEEEEECSSEEEEEEECTTCCBCCCEEEECC-------------SSHH----------HHHHHHHHHHHHHHT---TC
T ss_pred cEEEEEEECCCEEEEEEECCCCCEEEEEEeeCC-------------CCHH----------HHHHHHHHHHHHHHh---hc
Confidence 589999999999999999999999987666542 2455 899999999988865 25
Q ss_pred CEeEEEeecccceeeEecCCCcccc--ccCC-CCCCccccccccCCCCCCccccCCChHHHHHHHH
Q 015802 90 KVTAVSGSGQQHGSVYWKKGSATIL--SSLD-PKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIE 152 (400)
Q Consensus 90 ~I~aIgis~~~~~~v~~d~~g~~~~--~~~~-~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~~ 152 (400)
+|.+|||+.++ ++|.+...+. ++++ .+.|+.+.|+..|+ .|+.+-||.++....+.+.
T Consensus 56 ~i~gigi~~pG----~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~-~pv~v~NDa~aaal~E~~~ 116 (321)
T 3vgl_A 56 DVEAVGIGAAG----YVDDKRATVLFAPNIDWRHEPLKDKVEQRVG-LPVVVENDANAAAWGEYRF 116 (321)
T ss_dssp CEEEEEEEESS----EECTTSSCEEECSSSCCEEECHHHHHHHHHC-SCEEEEEHHHHHHHHHHHH
T ss_pred CceEEEEeccc----cEeCCCCEEEeCCCCCCcCCCHHHHHhhhhC-CCEEEEehhhhHHHHHHHh
Confidence 89999999873 3676544322 2343 22466666776666 4777778888777766654
No 25
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=98.38 E-value=4.7e-07 Score=90.97 Aligned_cols=116 Identities=11% Similarity=0.099 Sum_probs=77.8
Q ss_pred CceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhc--C
Q 015802 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--L 86 (400)
Q Consensus 9 ~~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~ 86 (400)
..++||||+|+|++|++++|.+|+++...+.+++ .++++ .+++.+.++++++.+. .
T Consensus 107 ~~~~lGIDiGgt~i~~~l~d~~G~il~~~~~~~~------------~~~~~----------~~~~~l~~~i~~~~~~~~~ 164 (429)
T 1z05_A 107 GWQFLSMRLGRGYLTIALHELGGEVLIDTKIDIH------------EIDQD----------DVLARLLFEIEEFFQTYAA 164 (429)
T ss_dssp TEEEEEEEEETTEEEEEEEETTSCEEEEEEEECC------------CCBHH----------HHHHHHHHHHHHHHHHTTT
T ss_pred CCEEEEEEECCCEEEEEEECCCCCEEEEEEEcCC------------CCCHH----------HHHHHHHHHHHHHHHhcCC
Confidence 3589999999999999999999999988776653 12455 8999999999988764 4
Q ss_pred CCCCEeEEEeecccceeeEecCC-Cccc-cccCC-CCCCccccccccCCCCCCccccCCChHHHHHHH
Q 015802 87 DLSKVTAVSGSGQQHGSVYWKKG-SATI-LSSLD-PKKPLVDQLGDAFSTKESPVWMDSSTTAQCREI 151 (400)
Q Consensus 87 ~~~~I~aIgis~~~~~~v~~d~~-g~~~-~~~~~-~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~ 151 (400)
+..+|.+|||+.++ ++|.+ |... .++++ .+.++.+.|+..|+ .|+.+-+|.++....+.+
T Consensus 165 ~~~~i~gigi~~pG----~vd~~~g~v~~~~~l~w~~~~l~~~L~~~~~-~pV~v~NDa~aaalaE~~ 227 (429)
T 1z05_A 165 QLDRVTSIAITLPG----LVNSEQGIVLQMPHYNVKNLALGPEIYKATG-LPVFVANDTRAWALAEKL 227 (429)
T ss_dssp TCCEEEEEEEEESS----EEETTTTEEEECSSSBCSSBCHHHHHHHHHC-SCEEEEEHHHHHHHHHHH
T ss_pred CcCceEEEEEeccC----cEeCCCCeEeecCCCCCCCCCHHHHHHHHhC-CCEEEechhHHHHHHHHH
Confidence 56789999999873 35664 4332 12232 22344444554444 355555555555544433
No 26
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=98.38 E-value=2.9e-07 Score=91.04 Aligned_cols=78 Identities=15% Similarity=0.224 Sum_probs=60.9
Q ss_pred ceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhc--CC
Q 015802 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--LD 87 (400)
Q Consensus 10 ~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~ 87 (400)
.++||||+|+|++|++++|.+|+++...+.+++ .+++++ .+++.+.++++++.+. .+
T Consensus 87 ~~~lGIDiGgt~i~~~l~d~~G~vl~~~~~~~~-----------~~~~~~----------~~~~~l~~~i~~~~~~~~~~ 145 (380)
T 2hoe_A 87 AYVLGIEVTRDEIAACLIDASMNILAHEAHPLP-----------SQSDRE----------ETLNVMYRIIDRAKDMMEKL 145 (380)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEEECC-----------SSCCHH----------HHHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEEECCCEEEEEEECCCCCEEEEEEEccC-----------CCCCHH----------HHHHHHHHHHHHHHHhcCCC
Confidence 589999999999999999999999988777654 123555 8899999988887653 45
Q ss_pred CCCEeEEEeecccceeeEecC-CCcc
Q 015802 88 LSKVTAVSGSGQQHGSVYWKK-GSAT 112 (400)
Q Consensus 88 ~~~I~aIgis~~~~~~v~~d~-~g~~ 112 (400)
..+|.+|||+.++ . +|. +|..
T Consensus 146 ~~~i~gigi~~pG--~--vd~~~g~v 167 (380)
T 2hoe_A 146 GSKLSALTVAAPG--P--IDTERGII 167 (380)
T ss_dssp TCCCCEEEEEESS--C--EETTTTEE
T ss_pred cCcEEEEEEEeec--c--EECCCCEE
Confidence 6789999999873 3 565 4443
No 27
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=98.32 E-value=2.1e-07 Score=90.54 Aligned_cols=110 Identities=11% Similarity=0.162 Sum_probs=77.9
Q ss_pred CCCCceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhc
Q 015802 6 LPKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS 85 (400)
Q Consensus 6 ~~~~~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (400)
+|+ +|+||||+|+|++|++++|.+|+++...+.+.. ...+++++ ++++.+.++++++.+.
T Consensus 3 ~M~-~~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~~---------~~~~~~~~----------~~~~~i~~~i~~~~~~ 62 (347)
T 2ch5_A 3 FMA-AIYGGVEGGGTRSEVLLVSEDGKILAEADGLST---------NHWLIGTD----------KCVERINEMVNRAKRK 62 (347)
T ss_dssp SSS-CEEEEEEECTTCEEEEEEETTSCEEEEEEECCC---------CHHHHCHH----------HHHHHHHHHHHHHHHH
T ss_pred ccc-eEEEEEEcCccceEEEEEeCCCCEEEEEeCCCC---------CcccCCHH----------HHHHHHHHHHHHHHHh
Confidence 354 489999999999999999999999987765321 01235666 8999999999987764
Q ss_pred --CCCC-CEeEEEeecccceeeEecCCCccccccCCCCCCccccccccCC--CCCCccccCCChHHHH
Q 015802 86 --LDLS-KVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFS--TKESPVWMDSSTTAQC 148 (400)
Q Consensus 86 --~~~~-~I~aIgis~~~~~~v~~d~~g~~~~~~~~~~~pl~~~~~~~~~--~~~~i~w~D~R~~~~~ 148 (400)
.+.. +|.+|||+.++ . +|.+... ++.+.++..|+ ..|+.+.||.++....
T Consensus 63 ~~~~~~~~i~gigi~~pG--~--vd~~~~~---------~l~~~l~~~~~~~~~pv~v~NDa~aaa~a 117 (347)
T 2ch5_A 63 AGVDPLVPLRSLGLSLSG--G--DQEDAGR---------ILIEELRDRFPYLSESYLITTDAAGSIAT 117 (347)
T ss_dssp HTCCTTCCBSEEEEEETT--T--TCHHHHH---------HHHHHHHHHCTTSBSCEEEEEHHHHHHHH
T ss_pred cCCCcccceeEEEEeccC--C--CchHHHH---------HHHHHHHHhcCCCCceEEEECcHHHHHHh
Confidence 4445 79999999874 3 2332221 45555555543 2578888999887765
No 28
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=98.29 E-value=6.4e-07 Score=86.46 Aligned_cols=119 Identities=18% Similarity=0.182 Sum_probs=82.5
Q ss_pred CCCCceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhc
Q 015802 6 LPKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS 85 (400)
Q Consensus 6 ~~~~~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (400)
+.+..++||||+|+|++|++++|.+|+++...+.+++ ...+++ .+++.+.++++++.+
T Consensus 15 ~~~~~~~lgidiggt~i~~~l~d~~g~il~~~~~~~~-----------~~~~~~----------~~~~~i~~~i~~~~~- 72 (321)
T 3r8e_A 15 LYFQGMILGIDVGGTSVKFGLVTPEGEIQNATRFMTA-----------DWVNGI----------GFVESMKLEIGNFLK- 72 (321)
T ss_dssp ----CCEEEEECCSSEEEEEEECTTCCEEEEEEEEHH-----------HHHTTT----------CHHHHHHHHHHHHHH-
T ss_pred hccCcEEEEEEECCCEEEEEEEcCCCcEEEEEEEeCC-----------CCCCHH----------HHHHHHHHHHHHHHh-
Confidence 3456799999999999999999999999998877664 234677 888999888888764
Q ss_pred CCCCCEeEEEeecccceeeEecC-CCcccc-ccCC--CCCCccccccccC-CCCCCccccCCChHHHHHHHH
Q 015802 86 LDLSKVTAVSGSGQQHGSVYWKK-GSATIL-SSLD--PKKPLVDQLGDAF-STKESPVWMDSSTTAQCREIE 152 (400)
Q Consensus 86 ~~~~~I~aIgis~~~~~~v~~d~-~g~~~~-~~~~--~~~pl~~~~~~~~-~~~~~i~w~D~R~~~~~~~~~ 152 (400)
...+|.+|||+.+ |. +|. +|..+. ++++ .+.++.+.|+..| . .|+.+=||.++....|.+.
T Consensus 73 -~~~~i~gigi~~p--G~--vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~-~pV~v~NDa~aaalaE~~~ 138 (321)
T 3r8e_A 73 -QYPIVKGVGIGWP--GL--VSLDRTKVILLPNIPSVVNVPIVEILRSEFPH-IHFKIENDAKCAALGEYYF 138 (321)
T ss_dssp -HCTTCCEEEEEES--SE--ECTTSCCEEEBTTBCCCCSCCHHHHHHHHCTT-SEEEEEEHHHHHHHHHHHH
T ss_pred -ccCCeeEEEEEec--cc--EECCCCEEEeCCCCccccCCCHHHHHHHHcCC-CCEEEEchHHHHHHHHHHh
Confidence 2467899999987 33 574 444321 2332 2346666666665 5 4666667777776666554
No 29
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=98.18 E-value=6.8e-07 Score=85.18 Aligned_cols=101 Identities=11% Similarity=0.003 Sum_probs=73.2
Q ss_pred eEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhcCCCCC
Q 015802 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 90 (400)
|+||||+|+|++|++++|.+|+++...+.+++ .+.+++++ .+++.+.++++++.+..
T Consensus 3 ~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~~---------~~~~~~~~----------~~~~~i~~~i~~~~~~~---- 59 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCEGNFIGEGSSGPG---------NYHNVGLT----------RAIENIKEAVKIAAKGE---- 59 (299)
T ss_dssp CEEEEEECSSCEEEEEECTTSCEEEEEEESCC---------CHHHHCHH----------HHHHHHHHHHHHHHTSC----
T ss_pred EEEEEEeCCCcEEEEEEcCCCCEEEEEeCCCC---------CcccCCHH----------HHHHHHHHHHHHHHhcC----
Confidence 79999999999999999999999988766543 12245666 89999999998887531
Q ss_pred EeEEEeecccceeeEecC-CCccccccCCCCCCccccccccCCCCCCccccCCChHHHHHH
Q 015802 91 VTAVSGSGQQHGSVYWKK-GSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCRE 150 (400)
Q Consensus 91 I~aIgis~~~~~~v~~d~-~g~~~~~~~~~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~ 150 (400)
+.+|||+..+. |. ++.. ++.+.++. |+ .|+++++|.++....+.
T Consensus 60 ~~~igi~~~G~-----~~~~~~~---------~l~~~l~~-~~-~pv~v~ND~~aaa~~e~ 104 (299)
T 2e2o_A 60 ADVVGMGVAGL-----DSKFDWE---------NFTPLASL-IA-PKVIIQHDGVIALFAET 104 (299)
T ss_dssp CSEEEEEETTC-----CSHHHHH---------HHHHHHTT-SS-SEEEEEEHHHHHHHHHH
T ss_pred CCEEEEEcCCC-----CchhHHH---------HHHHHHHh-CC-CCEEEeCcHHHHHhhcc
Confidence 55677665521 21 1211 45566666 66 68999999998886654
No 30
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.15 E-value=3.8e-06 Score=79.16 Aligned_cols=69 Identities=17% Similarity=0.223 Sum_probs=51.7
Q ss_pred ceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhh-cCCC
Q 015802 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSK-SLDL 88 (400)
Q Consensus 10 ~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~ 88 (400)
.++||||+|||++|++++|++|+++.....+++. +|. + ++.++++++.+ .++.
T Consensus 3 ~~~lGiD~Gst~~k~~l~d~~g~i~~~~~~~~~~-------------~~~----------~---~~~~~l~~l~~~~~~~ 56 (270)
T 1hux_A 3 IYTLGIDVGSTASKCIILKDGKEIVAKSLVAVGT-------------GTS----------G---PARSISEVLENAHMKK 56 (270)
T ss_dssp CEEEEEEECSSEEEEEEEETTTEEEEEEEEECCS-------------SCC----------H---HHHHHHHHHHHHTCCG
T ss_pred cEEEEEEeccceEEEEEEeCCCCEEEEEEecCCC-------------CHH----------H---HHHHHHHHHHHcCCCh
Confidence 4899999999999999999999999987766531 343 2 44455565544 2445
Q ss_pred CCEeEEEeecccceee
Q 015802 89 SKVTAVSGSGQQHGSV 104 (400)
Q Consensus 89 ~~I~aIgis~~~~~~v 104 (400)
.+|.+|+++++++.++
T Consensus 57 ~~i~~i~~TG~g~~~~ 72 (270)
T 1hux_A 57 EDMAFTLATGYGRNSL 72 (270)
T ss_dssp GGCSEEEEESTTTTTT
T ss_pred hHEEEEEEeCccccch
Confidence 6789999999977654
No 31
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=98.07 E-value=3.3e-06 Score=80.85 Aligned_cols=107 Identities=10% Similarity=0.114 Sum_probs=66.6
Q ss_pred CceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhcCCC
Q 015802 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDL 88 (400)
Q Consensus 9 ~~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 88 (400)
+++++|||+|+|++|++++|.+|+++...+.+++ +++ ++++.+.+.++ .
T Consensus 2 ~~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~t~--------------~~~----------~~l~~i~~~~~-------~ 50 (302)
T 3epq_A 2 NAMLGGIEAGGTXFVCAVGREDGTIIDRIEFPTX--------------MPD----------ETIEXVIQYFS-------Q 50 (302)
T ss_dssp -CCEEEEEECSSEEEEEEECTTSCEEEEEEEECC--------------CHH----------HHHHHHHHHHT-------T
T ss_pred CcEEEEEEECcceeEEEEEECCCcEEEEEEecCC--------------ChH----------HHHHHHHHHhc-------c
Confidence 4689999999999999999999999987766542 223 55444433322 2
Q ss_pred CCEeEEEeecccceeeEecCC------Ccccc-ccCC-CCCCccccccccCCCCCCccccCCChHHHHHHH
Q 015802 89 SKVTAVSGSGQQHGSVYWKKG------SATIL-SSLD-PKKPLVDQLGDAFSTKESPVWMDSSTTAQCREI 151 (400)
Q Consensus 89 ~~I~aIgis~~~~~~v~~d~~------g~~~~-~~~~-~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~ 151 (400)
.+|.+|||+.+ +. +|.+ |.... ++++ .+.|+.+.|+..|+ .|+.+-||.++....|.+
T Consensus 51 ~~i~gigi~~p--G~--vd~~~~~~~~G~i~~~~~~~w~~~~l~~~l~~~~~-~pV~v~NDanaaalaE~~ 116 (302)
T 3epq_A 51 FSLQAIGIGSF--GP--VDNDXTSQTYGTITATPXAGWRHYPFLQTVXNEMX-IPVGFSTDVNAAALGEFL 116 (302)
T ss_dssp SCCSEEEEEEC--SS--EECCTTSTTTTEECCCSSTTTBTCCHHHHHHHHHC-SCEEEEEHHHHHHHHHHH
T ss_pred CCceEEEEEec--ee--eccccccccccEEecCCCCCccCCChHHHHHHHhC-CCEEEechhHHHHHHHHH
Confidence 47899999987 44 4544 33211 1222 22455555665555 456666666666655544
No 32
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=98.05 E-value=3.8e-06 Score=80.74 Aligned_cols=75 Identities=7% Similarity=0.045 Sum_probs=56.8
Q ss_pred ceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhcCCCC
Q 015802 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLS 89 (400)
Q Consensus 10 ~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 89 (400)
.++||||+|+|++|++++|.+|+++...+.+++ +.+++ .+++.+.+.++++.+.. ..
T Consensus 7 ~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~------------~~~~~----------~~~~~i~~~i~~~~~~~-~~ 63 (310)
T 3htv_A 7 NVVAGVDMGATHIRFCLRTAEGETLHCEKKRTA------------EVIAP----------GLVSGIGEMIDEQLRRF-NA 63 (310)
T ss_dssp EEEEEEEECSSEEEEEEEETTSCEEEEEEEEHH------------HHHTT----------CHHHHHHHHHHHHHHHH-TE
T ss_pred CEEEEEEeCCCEEEEEEECCCCCEEEEEEecCc------------cccHH----------HHHHHHHHHHHHHHHhc-CC
Confidence 589999999999999999999999988776643 22345 68888888888765431 23
Q ss_pred CEeEEEeecccceeeEecCCCc
Q 015802 90 KVTAVSGSGQQHGSVYWKKGSA 111 (400)
Q Consensus 90 ~I~aIgis~~~~~~v~~d~~g~ 111 (400)
+|.+|||+.+ +. +|.+..
T Consensus 64 ~i~gigi~~p--G~--vd~~~g 81 (310)
T 3htv_A 64 RCHGLVMGFP--AL--VSKDKR 81 (310)
T ss_dssp EEEEEEEEES--SC--BCTTSS
T ss_pred CeeEEEEecc--cc--EeCCCC
Confidence 6899999987 43 576543
No 33
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=98.03 E-value=5.3e-06 Score=77.82 Aligned_cols=117 Identities=14% Similarity=0.169 Sum_probs=68.9
Q ss_pred CCceEEEEEecCcceEEEEEcCC-CCEEEEE-EeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhc
Q 015802 8 KDSLFLGFDSSTQSLKATVLDSN-LNIVASE-QLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS 85 (400)
Q Consensus 8 ~~~~~lgIDiGttsiKa~l~d~~-G~~v~~~-~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (400)
+..++||||+|+|++|++++|.+ |+++... +.+++ ...+++ .+.+.+.++++++.+.
T Consensus 10 ~~~~~lgidiggt~i~~~l~dl~~g~i~~~~~~~~~~-----------~~~~~~----------~~~~~i~~~i~~~~~~ 68 (267)
T 1woq_A 10 KNAPLIGIDIGGTGIKGGIVDLKKGKLLGERFRVPTP-----------QPATPE----------SVAEAVALVVAELSAR 68 (267)
T ss_dssp -CCCEEEEEECSSEEEEEEEETTTTEEEEEEEEEECC-----------SSCCHH----------HHHHHHHHHHHHHHTS
T ss_pred CCCEEEEEEECCCEEEEEEEECCCCeEEEEEEecCCC-----------ccCCHH----------HHHHHHHHHHHHHHHh
Confidence 33479999999999999999987 7777432 33322 112345 7888888888887653
Q ss_pred -CCCCCEeEEEeecccceeeEecCCCcccc-ccC--C-CCCCccccccccCCCCCCccccCCChHHHHHHH
Q 015802 86 -LDLSKVTAVSGSGQQHGSVYWKKGSATIL-SSL--D-PKKPLVDQLGDAFSTKESPVWMDSSTTAQCREI 151 (400)
Q Consensus 86 -~~~~~I~aIgis~~~~~~v~~d~~g~~~~-~~~--~-~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~ 151 (400)
.....+.+|||+.+ |.+ | +|.... +++ + .+.++.+.|+..|+ .|+.+=||.++....|.+
T Consensus 69 ~~~~~~~~~igi~~p--G~v--~-~g~v~~~~~l~~~w~~~~l~~~l~~~~~-~pV~v~NDanaaalaE~~ 133 (267)
T 1woq_A 69 PEAPAAGSPVGVTFP--GII--Q-HGVVHSAANVDKSWLNTDIDALLTARLG-RPVEVINDADAAGLAEAR 133 (267)
T ss_dssp TTCCCTTCCEEEEES--SCE--E-TTEECCCTTSCGGGTTCBHHHHHHHHHT-SCEEEEEHHHHHHHHHHH
T ss_pred ccccCccceEEEEcc--ceE--c-CCEEEeCCCCCCCCCCCCHHHHHHHHHC-CCEEEeehhHHHHHHHHH
Confidence 11234456777776 333 5 555421 223 1 22345555555554 355555666555554443
No 34
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=98.02 E-value=1e-05 Score=77.31 Aligned_cols=70 Identities=11% Similarity=0.031 Sum_probs=53.5
Q ss_pred ceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhc--CC
Q 015802 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--LD 87 (400)
Q Consensus 10 ~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~ 87 (400)
+|+||||+|+|++|++++|.+|+++.+.+.+.. . ..++++ .+++.+.++++++.+. .+
T Consensus 11 ~~~lGiDiGgT~i~~~l~d~~G~il~~~~~~~~----~------~~~~~~----------~~~~~l~~~i~~~l~~~~~~ 70 (305)
T 1zc6_A 11 RYLIGVDGGGTGTRIRLHASDGTPLAMAEGGAS----A------LSQGIA----------KSWQAVLSTLEAAFQQAGLP 70 (305)
T ss_dssp CEEEEEEECSSCEEEEEEETTCCEEEEEEESCC----C------GGGCHH----------HHHHHHHHHHHHHHHHTTCC
T ss_pred CEEEEEEcCccceEEEEEcCCCCEEEEEeCCCC----C------cccCHH----------HHHHHHHHHHHHHHHhcCCC
Confidence 599999999999999999999999987755321 0 124555 8999999999988764 44
Q ss_pred CCCE--eEEEeecc
Q 015802 88 LSKV--TAVSGSGQ 99 (400)
Q Consensus 88 ~~~I--~aIgis~~ 99 (400)
..+| .+|||+..
T Consensus 71 ~~~i~~~~igig~p 84 (305)
T 1zc6_A 71 AAPASACAIGLGLS 84 (305)
T ss_dssp CCCGGGEEEEEEES
T ss_pred hhhhccceEEEEec
Confidence 5666 67777665
No 35
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=98.00 E-value=6.7e-06 Score=79.30 Aligned_cols=117 Identities=14% Similarity=0.198 Sum_probs=69.3
Q ss_pred CCCCCCceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHh
Q 015802 4 YSLPKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLS 83 (400)
Q Consensus 4 ~~~~~~~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (400)
+++..+.++||||+|+|++|++++|.+|+++...+.+.+. .+++ .+.+.+.++++++.
T Consensus 18 l~~~~~~~~lgiDiGgt~i~~~l~d~~g~il~~~~~~~~~------------~~~~----------~~~~~i~~~i~~~~ 75 (327)
T 2ap1_A 18 LYFQSNAMYYGFDIGGTKIALGVFDSTRRLQWEKRVPTPH------------TSYS----------AFLDAVCELVEEAD 75 (327)
T ss_dssp -----CCEEEEEEECSSEEEEEEEETTCCEEEEEEEECCC------------SCHH----------HHHHHHHHHHHHHH
T ss_pred EEEcCCceEEEEEECCCEEEEEEEeCCCCEEEEEEecCCC------------CCHH----------HHHHHHHHHHHHHH
Confidence 5677788999999999999999999999999887766531 1334 67788888887765
Q ss_pred hcCCCCCEeEEEeecccceeeEecCC-CccccccCC--CCCCccccccccCCCCCCccccCCChHHHHH
Q 015802 84 KSLDLSKVTAVSGSGQQHGSVYWKKG-SATILSSLD--PKKPLVDQLGDAFSTKESPVWMDSSTTAQCR 149 (400)
Q Consensus 84 ~~~~~~~I~aIgis~~~~~~v~~d~~-g~~~~~~~~--~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~ 149 (400)
.. ...+.+|||+.. |. +|.+ |....+++. .+.+|.+.|+..|. .|+.+=||.++....+
T Consensus 76 ~~--~~~i~~igi~~p--G~--vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~-~pv~v~NDa~aaalgE 137 (327)
T 2ap1_A 76 QR--FGVKGSVGIGIP--GM--PETEDGTLYAANVPAASGKPLRADLSARLD-RDVRLDNDANCFALSE 137 (327)
T ss_dssp HH--HTSCCEEEEEES--SB--SCCTTSCCBCTTCTTTTTSCHHHHHHHHHT-SCEEEEEHHHHHHHHH
T ss_pred Hh--cCCccEEEEEee--ee--EECCCCEEEccCCCccCCCChHHHHHHHHC-CCEEEecHHHHHHHHH
Confidence 43 124777888776 33 4554 332111111 12244444444443 3444445555544443
No 36
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=98.00 E-value=5.4e-06 Score=79.07 Aligned_cols=109 Identities=14% Similarity=0.161 Sum_probs=65.6
Q ss_pred ceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhcCCCC
Q 015802 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLS 89 (400)
Q Consensus 10 ~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 89 (400)
.++||||+|+|++|++++|.+|+++...+.+++. .+++ .+++.+.+.++ + ..
T Consensus 4 m~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~~------------~~~~----------~~~~~i~~~~~---~---~~ 55 (297)
T 4htl_A 4 MKIAAFDIGGTALKMGVVLPHGEIILTKSAEISG------------SDGD----------QILAEMKVFLA---E---NT 55 (297)
T ss_dssp CCEEEEEECSSEEEEEEECTTSCEEEEEEEECST------------TCHH----------HHHHHHHHHHH---T---CT
T ss_pred cEEEEEEeCCCeEEEEEECCCCCEEEEEEecCCC------------CCHH----------HHHHHHHHHHh---h---cC
Confidence 4799999999999999999999999987776531 1223 55554443332 1 35
Q ss_pred CEeEEEeecccceeeEecCC-Ccccc-ccCC--CCCCccccccccCCCCCCccccCCChHHHHHHH
Q 015802 90 KVTAVSGSGQQHGSVYWKKG-SATIL-SSLD--PKKPLVDQLGDAFSTKESPVWMDSSTTAQCREI 151 (400)
Q Consensus 90 ~I~aIgis~~~~~~v~~d~~-g~~~~-~~~~--~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~ 151 (400)
+|.+|||+.++ ++|.+ |..+. +++. .+.++.+.|+..|+ .|+.+=+|.++....|.+
T Consensus 56 ~i~gigi~~pG----~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~-~pV~v~NDa~aaal~E~~ 116 (297)
T 4htl_A 56 DVTGIAVSAPG----YVNPKTGLITMGGAIRRFDNFNLKEWLEAETG-LPVAIENDANCALLAEKW 116 (297)
T ss_dssp TCCEEEEEESS----EECTTTCEEEECTTCGGGTTEEHHHHHHHHHC-SCEEEEEHHHHHHHHHHH
T ss_pred CeeEEEEecCc----ceeCCCCEEEeCCCCCCccCCCHHHHHHHHHC-cCEEEecHHHHHHHHHHH
Confidence 78999999873 36754 44321 1221 22244444444444 344444555555544443
No 37
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=97.95 E-value=3.8e-06 Score=80.39 Aligned_cols=112 Identities=14% Similarity=0.135 Sum_probs=71.3
Q ss_pred eEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhcCCCCC
Q 015802 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 90 (400)
|+||||+|+|++|++++|.+ +++...+.+++. .+++ .+++.+.++++++.+.. ..+
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~-~~l~~~~~~~~~------------~~~~----------~~~~~i~~~i~~~~~~~-~~~ 57 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGK-RLLSKVVVPTPK------------EGGE----------RVAEALAEAAERAEREA-GVR 57 (302)
T ss_dssp CEEEEEECSSEEEEEEECSS-SBSCCEEEECCS------------SCHH----------HHHHHHHHHHHHHHHHH-TCC
T ss_pred EEEEEEEcCCEEEEEEEeCC-CcEEEEEEcCCC------------CChH----------HHHHHHHHHHHHHHhhc-cCC
Confidence 79999999999999999988 455555554431 1124 78888888888876531 457
Q ss_pred EeEEEeecccceeeEecCCCcccc--ccC-C-CCCCccccccccCCCCCCccccCCChHHHHHHH
Q 015802 91 VTAVSGSGQQHGSVYWKKGSATIL--SSL-D-PKKPLVDQLGDAFSTKESPVWMDSSTTAQCREI 151 (400)
Q Consensus 91 I~aIgis~~~~~~v~~d~~g~~~~--~~~-~-~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~ 151 (400)
|.+|||+.+ +. +|.+...+. +++ + .+.++.+.|+..|+ .|+.+-||.++....|.+
T Consensus 58 i~gigi~~p--G~--vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~-~pv~v~NDa~aaal~E~~ 117 (302)
T 3vov_A 58 GEAIGLGTP--GP--LDFRRGVIRFAPNIPGVQDFPIRRILEEATG-RPVFLENDANAAALAEHH 117 (302)
T ss_dssp CSSEEEEES--SC--EETTTTEEC---CCTTCTTCCHHHHHHHHHS-SCEEEEEHHHHHHHHHHH
T ss_pred ceEEEEEec--cc--EeCCCCEEEcCCCCCCcCCCChHHHHHHhhC-CCEEEEechHHHHHHHHH
Confidence 889999877 33 565433321 233 2 22455555555555 456666666666655544
No 38
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=97.86 E-value=4.9e-06 Score=81.89 Aligned_cols=116 Identities=13% Similarity=0.021 Sum_probs=74.2
Q ss_pred CCCceEEEEEecCcceEEEEEcCCCCEEEEE-EeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhc
Q 015802 7 PKDSLFLGFDSSTQSLKATVLDSNLNIVASE-QLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS 85 (400)
Q Consensus 7 ~~~~~~lgIDiGttsiKa~l~d~~G~~v~~~-~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (400)
++..++||||+|+|++|++++| +|+++... +.+++ .. +++ .+.+.+.+.++.+.+.
T Consensus 6 ~d~~~~lgiDIGgt~i~~~l~d-~G~il~~~~~~~~~-----------~~-~~~----------~~l~~i~~~~~~i~~~ 62 (366)
T 3mcp_A 6 NDNRIVMTLDAGGTNFVFSAIQ-GGKEIADPVVLPAC-----------AD-CLD----------KCLGNLVEGFKAIQAG 62 (366)
T ss_dssp TCCCEEEEEECSSSEEEEEEEE-TTEECSCCEEEECC-----------TT-CHH----------HHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEEECcceEEEEEEE-CCEEEEEEEEEECC-----------CC-CHH----------HHHHHHHHHHHHHHHH
Confidence 3456899999999999999999 99998765 55443 11 455 7777777733222221
Q ss_pred CCCCCEeEEEeecccceeeEecC-CCcccc-ccC-C-C-CCCccccccccCCCCCCccccCCChHHHHHHH
Q 015802 86 LDLSKVTAVSGSGQQHGSVYWKK-GSATIL-SSL-D-P-KKPLVDQLGDAFSTKESPVWMDSSTTAQCREI 151 (400)
Q Consensus 86 ~~~~~I~aIgis~~~~~~v~~d~-~g~~~~-~~~-~-~-~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~ 151 (400)
.. .+|.+|||+.+ |. +|. +|.... +++ + . +.++.+.|+..|+ .|+.+=||.++....|.+
T Consensus 63 ~~-~~i~gIGIavP--G~--Vd~~~G~i~~~~nlp~w~~~~~l~~~L~~~~g-~PV~veNDanaaAlgE~~ 127 (366)
T 3mcp_A 63 LP-EAPVAISFAFP--GP--ADYQAGIIGDLPNFPSFRGGVALGPFLEDIFG-IPVFINNDGSLFAYGEAL 127 (366)
T ss_dssp CS-SCCCEEEEECC--SS--EETTTTEECCCTTCGGGTTCBCHHHHHHHHHC-SCEEEECHHHHHHHHHHH
T ss_pred hh-cCCeEEEEEec--ce--EeCCCCEEEeCCCcccccCCCCHHHHHHHHHC-CCEEEechhhHHHHHHHH
Confidence 22 67999999987 44 565 454321 244 2 2 3466666666665 466666777766666554
No 39
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=97.77 E-value=7.3e-06 Score=77.87 Aligned_cols=104 Identities=16% Similarity=0.015 Sum_probs=67.4
Q ss_pred eEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhcCCCCC
Q 015802 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 90 (400)
++||||+|+|++|++++| +|+++.+.+.+... + ...+++ .+++.+.++++++.. .+..+
T Consensus 1 ~~lgiDiGGT~~~~~l~d-~g~il~~~~~~~~~--~-------~~~~~~----------~~~~~i~~~i~~~~~-~~~~~ 59 (291)
T 1zbs_A 1 MILIGDSGSTKTDWCIAK-EGKSLGRFQTSGIN--P-------FQQDRN----------EIDTALRSEVLPAIG-QKASS 59 (291)
T ss_dssp CEEEEEECSSEEEEEEEE-TTEEEEEEEEECCC--T-------TTSCHH----------HHHHHHTTTTHHHHT-TSTTT
T ss_pred CEEEEEeCccceEEEEEe-CCeEEEEEECCCCC--c-------ccCCHH----------HHHHHHHHHHHHHhC-CCccc
Confidence 479999999999999999 99999887664310 0 112344 677777777776542 23457
Q ss_pred EeEEEeecccceeeEecCCCccccccCCCCCCccccccccCCC-CCCccccCCChHHHHH
Q 015802 91 VTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFST-KESPVWMDSSTTAQCR 149 (400)
Q Consensus 91 I~aIgis~~~~~~v~~d~~g~~~~~~~~~~~pl~~~~~~~~~~-~~~i~w~D~R~~~~~~ 149 (400)
|.+|||+..+ ++ .+++. |+.+.++..|.. .|+.+=+|.++....+
T Consensus 60 i~~igig~pG--~~--~~~~~----------~l~~~l~~~~~~~~pv~v~NDa~~aa~ge 105 (291)
T 1zbs_A 60 IRAVYFYGAG--CT--PAKAP----------MLNEALDSMLPHCDRIEVAGDMLGAARAL 105 (291)
T ss_dssp CCEEEEEETT--CC--TTTHH----------HHHHHHHHHSTTCSEEEEECHHHHHHHHH
T ss_pred ccEEEEECCC--CC--hHHHH----------HHHHHHHHhcCCCCcEEEeCcHHHHHHhh
Confidence 8889988874 33 23332 344555554443 3666777877766544
No 40
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=97.68 E-value=5.7e-05 Score=71.42 Aligned_cols=105 Identities=11% Similarity=0.086 Sum_probs=69.0
Q ss_pred eEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhcCCCCC
Q 015802 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 90 (400)
++||||+|+|++|++++|.+|+++...+.+.+ .+++ .+.+.+.+++++ .+
T Consensus 5 ~~lgidiggt~i~~~l~d~~g~il~~~~~~~~-------------~~~~----------~~~~~i~~~i~~-------~~ 54 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTPDGKILDKTSISTP-------------ENLE----------DLLAWLDQRLSE-------QD 54 (292)
T ss_dssp CEEEEEEETTEEEEEEECTTCCEEEEEEECCC-------------SSHH----------HHHHHHHHHHTT-------SC
T ss_pred EEEEEEECCCEEEEEEECCCCCEEEEEEEeCC-------------CCHH----------HHHHHHHHHHHh-------CC
Confidence 58999999999999999999999987655432 1233 555554444432 46
Q ss_pred EeEEEeecccceeeEecCC-Ccccc-ccCC--CCCCccccccccCCCCCCccccCCChHHHHHHH
Q 015802 91 VTAVSGSGQQHGSVYWKKG-SATIL-SSLD--PKKPLVDQLGDAFSTKESPVWMDSSTTAQCREI 151 (400)
Q Consensus 91 I~aIgis~~~~~~v~~d~~-g~~~~-~~~~--~~~pl~~~~~~~~~~~~~i~w~D~R~~~~~~~~ 151 (400)
+.+|||+.+ |. +|.+ |.... ++++ .+.++.+.| ..|+ .|+.+=+|.++....+.+
T Consensus 55 i~gigi~~p--G~--vd~~~g~v~~~~~~~~~~~~~l~~~l-~~~~-~pv~v~NDa~aaa~~e~~ 113 (292)
T 2gup_A 55 YSGIAMSVP--GA--VNQETGVIDGFSAVPYIHGFSWYEAL-SSYQ-LPVHLENDANCVGLSELL 113 (292)
T ss_dssp CSEEEEEES--SE--ECTTTCBEESCCSSGGGSSSBHHHHT-GGGC-CCEEEEEHHHHHHHHHHH
T ss_pred CcEEEEEec--Cc--ccCCCCEEEecCCCCcccCCCHHHHH-HHcC-CCEEEechHHHHHHHHHH
Confidence 889999887 33 5654 43321 2332 234676667 6665 467777787777766655
No 41
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=97.67 E-value=6.3e-06 Score=78.33 Aligned_cols=102 Identities=16% Similarity=0.062 Sum_probs=55.0
Q ss_pred eEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhcCCCCC
Q 015802 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 90 (400)
|+||||+|+|++|++++| +|+++.+.+.+... + ...+++ .+++.+.++++++.. ..+
T Consensus 1 ~~lgiDiGGT~i~~~l~d-~g~il~~~~~~~~~--~-------~~~~~~----------~~~~~i~~~i~~~~~---~~~ 57 (291)
T 1zxo_A 1 MILIADSGSTKTDWCVVL-NGAVIKRLGTKGIN--P-------FFQSEE----------EIQQKLTASLLPQLP---EGK 57 (291)
T ss_dssp ---CEECCTTCEEEEEEC-SSSEEEEEEECCCC--T-------TTSCST----------TTTTTTTC-------------
T ss_pred CEEEEEeccccEEEEEEc-CCeEEEEEECCCCC--c-------ccCCHH----------HHHHHHHHHHHHhcC---ccc
Confidence 479999999999999999 99999887654311 0 011233 344444445544432 346
Q ss_pred EeEEEeecccceeeEecCCCccccccCCCCCCccccccccCCC-CCCccccCCChHHHHH
Q 015802 91 VTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFST-KESPVWMDSSTTAQCR 149 (400)
Q Consensus 91 I~aIgis~~~~~~v~~d~~g~~~~~~~~~~~pl~~~~~~~~~~-~~~i~w~D~R~~~~~~ 149 (400)
|.+|||+..+ ++ .+++. ++.+.++..|.. .|+.+-+|.++....+
T Consensus 58 i~~igig~pG--~~--~~~~~----------~l~~~l~~~~~~~~pv~v~NDa~~aalge 103 (291)
T 1zxo_A 58 FNAVYFYGAG--CT--PEKAP----------VLRRAIADSLPVIGNIKANSDMLAAAHGL 103 (291)
T ss_dssp ---CEEECTT--CC--TTTTH----------HHHHHHHHHSCCCSCCEEECSHHHHHHHT
T ss_pred ccEEEEEcCC--CC--HHHHH----------HHHHHHHHhcCCCceEEEECcHHHHHHhh
Confidence 7888888874 33 33333 355555555543 4777778888766544
No 42
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=97.67 E-value=2.8e-05 Score=73.38 Aligned_cols=63 Identities=17% Similarity=0.226 Sum_probs=45.7
Q ss_pred eEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhcCCCCC
Q 015802 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 90 (400)
++||||+|+|++|++++|.+|+++...+.+++. ..+++ .+.+.+.+.++++.+ +
T Consensus 2 ~~lgidiggt~~~~~l~d~~g~il~~~~~~~~~-----------~~~~~----------~~~~~i~~~i~~~~~-----~ 55 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGADGQIRDRRELPTPA-----------SQTPE----------ALRDALSALVSPLQA-----H 55 (289)
T ss_dssp CEEEEEECSSEEEEEEECTTCCEEEEEEEECCS-----------SCCHH----------HHHHHHHHHHTTTGG-----G
T ss_pred eEEEEEeCCCEEEEEEECCCCCEEEEEEecCCC-----------CCCHH----------HHHHHHHHHHHHHHh-----h
Confidence 589999999999999999999999887776531 11344 677777777666543 2
Q ss_pred EeEEEeecc
Q 015802 91 VTAVSGSGQ 99 (400)
Q Consensus 91 I~aIgis~~ 99 (400)
+.+|||+.+
T Consensus 56 ~~~igi~~p 64 (289)
T 2aa4_A 56 AQRVAIAST 64 (289)
T ss_dssp CSEEEEEES
T ss_pred CCEEEEEec
Confidence 346666655
No 43
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=97.32 E-value=0.00021 Score=70.21 Aligned_cols=112 Identities=13% Similarity=0.033 Sum_probs=73.8
Q ss_pred CceEEEEEecCcceEEEEEcC----CCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhh
Q 015802 9 DSLFLGFDSSTQSLKATVLDS----NLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSK 84 (400)
Q Consensus 9 ~~~~lgIDiGttsiKa~l~d~----~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (400)
..++||||+|+|++|++++|. +|+++...+. ++. .+++ .+.+.+.+.++++..
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~~~~~~g~il~~~~~-~~~------------~~~~----------~~~~~i~~~i~~~~~ 84 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVREGKNDSVHACVTRYS-MKR------------KDIT----------EIIEFFNEIIELMPA 84 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEECGGGCEEEEEEEEE-CTT------------CBGG----------GHHHHHHHHHHHSCH
T ss_pred CCeEEEEEEccccEEEEEEecccCCCccEEEEeee-cCC------------CCHH----------HHHHHHHHHHHHHhh
Confidence 568999999999999999998 9998876542 221 2344 677777777776543
Q ss_pred cCCCCCEeEEEeecccceeeEecCCCccccccCC-CCC-CccccccccCCCCCCccccCCChHHHHH
Q 015802 85 SLDLSKVTAVSGSGQQHGSVYWKKGSATILSSLD-PKK-PLVDQLGDAFSTKESPVWMDSSTTAQCR 149 (400)
Q Consensus 85 ~~~~~~I~aIgis~~~~~~v~~d~~g~~~~~~~~-~~~-pl~~~~~~~~~~~~~i~w~D~R~~~~~~ 149 (400)
. .+.+|.+|||+..+ . +|. |....+..+ ... ++.+.++..|.+.|+.+=||.++....+
T Consensus 85 ~-~~~~i~gigi~~pG--~--vd~-g~v~~~~~~~~~~~~l~~~l~~~~~~~pv~v~NDa~aaalge 145 (373)
T 2q2r_A 85 S-VMKRVKAGVINVPG--P--VTG-GAVGGPFNNLKGIARLSDYPKALFPPGHSAILNDLEAGGFGV 145 (373)
T ss_dssp H-HHTTEEEEEEEESS--C--EET-TTEECCCSSSBSCEEGGGSCTTTSCTTSEEEEEHHHHHHHHH
T ss_pred c-ccccccEEEEEeec--c--ccC-CEEeccCCCCCCcCCHHHHHHHhcCCCCEEEEccHhHHhccc
Confidence 2 13468899988773 3 444 443211111 222 6666676666644777888888877654
No 44
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=97.20 E-value=0.00028 Score=68.09 Aligned_cols=33 Identities=12% Similarity=0.073 Sum_probs=26.6
Q ss_pred CCceEEEEEecCcceEEEEEc-CCCCEEEEEEee
Q 015802 8 KDSLFLGFDSSTQSLKATVLD-SNLNIVASEQLQ 40 (400)
Q Consensus 8 ~~~~~lgIDiGttsiKa~l~d-~~G~~v~~~~~~ 40 (400)
++.++||||+|+|++|++++| .+|+++...+.+
T Consensus 12 ~~~~~lgiDiGGT~i~~~l~dl~~g~i~~~~~~~ 45 (332)
T 1sz2_A 12 STKYALVGDVGGTNARLALCDIASGEISQAKTYS 45 (332)
T ss_dssp --CEEEEEEEETTEEEEEEEETTTCCEEEEEEEE
T ss_pred CCCEEEEEEechhheEEEEEECCCCcEEEEEEec
Confidence 467999999999999999999 589998765443
No 45
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=97.15 E-value=0.001 Score=67.06 Aligned_cols=75 Identities=9% Similarity=-0.067 Sum_probs=52.0
Q ss_pred CceEEEEEecCcceEEEEEcCCCCE---EEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhc
Q 015802 9 DSLFLGFDSSTQSLKATVLDSNLNI---VASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS 85 (400)
Q Consensus 9 ~~~~lgIDiGttsiKa~l~d~~G~~---v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (400)
+..+||||+|+|++|++++|.+|++ +...+.+++... ...+++ ++++.+.++++++.+.
T Consensus 60 ~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip~~~--------~~~~~~----------~lfd~Ia~~i~~~~~~ 121 (457)
T 2yhx_A 60 AGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAMS--------TTAIPS----------DLWGNXAXSNAAFSSX 121 (457)
T ss_dssp CEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTTTT--------SCSCTH----------HHHHHHHHHHHHHHHH
T ss_pred cceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcCCcc--------CCCCHH----------HHHHHHHHHHHHHHhh
Confidence 3478999999999999999999998 444444443110 112445 8999999999997653
Q ss_pred --CC--CCCEeEEEeecccc
Q 015802 86 --LD--LSKVTAVSGSGQQH 101 (400)
Q Consensus 86 --~~--~~~I~aIgis~~~~ 101 (400)
.. ...+.+|+|+.++.
T Consensus 122 ~~~~~~~~~~lGi~fs~P~~ 141 (457)
T 2yhx_A 122 EFSSXAGSVPLGFTFXEAGA 141 (457)
T ss_dssp HTSSCSSCEEEEEECCSCCC
T ss_pred cccccccccceeeEEEEEEE
Confidence 21 12257888887754
No 46
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=97.07 E-value=0.0014 Score=61.25 Aligned_cols=30 Identities=30% Similarity=0.468 Sum_probs=26.2
Q ss_pred ceEEEEEecCcceEEEEEcCCCCEEEEEEe
Q 015802 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQL 39 (400)
Q Consensus 10 ~~~lgIDiGttsiKa~l~d~~G~~v~~~~~ 39 (400)
.|+||||+|||++|++++|.+++++.....
T Consensus 1 M~~lGID~GsT~tk~av~d~~~~il~~~~~ 30 (276)
T 4ehu_A 1 MYTMGLDIGSTASKGVILKNGEDIVASETI 30 (276)
T ss_dssp CEEEEEEECSSCEEEEEEETTTEEEEEEEE
T ss_pred CeEEEEEcCccEEEEEEEECCCeEEEEEEe
Confidence 479999999999999999999999876543
No 47
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=96.72 E-value=0.0049 Score=57.16 Aligned_cols=61 Identities=20% Similarity=0.103 Sum_probs=42.3
Q ss_pred CCceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhh
Q 015802 8 KDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSK 84 (400)
Q Consensus 8 ~~~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (400)
++++++|||+||+++|++++|.+++++.....+.... . .+...|.+ ...+.+..+++.+.+
T Consensus 26 ~~~~~~gIDiGS~s~k~vi~~~~~~~l~~~~~~~~~l--~----~g~i~d~~----------~~~~~l~~~~~~~~~ 86 (272)
T 3h1q_A 26 PPPYKVGVDLGTADIVLVVTDQEGIPVAGALKWASVV--K----DGLVVDYI----------GAIQIVRELKAKVER 86 (272)
T ss_dssp CSCCEEEEECCSSEEEEEEECTTCCEEEEEEEECCCC--B----TTBCTTHH----------HHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEcccceEEEEEECCCCcEEEEEeeccccc--C----CCEEEcHH----------HHHHHHHHHHHHHHH
Confidence 4579999999999999999999999998877654311 1 12344444 555566666655543
No 48
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=96.45 E-value=0.0013 Score=60.14 Aligned_cols=24 Identities=21% Similarity=0.123 Sum_probs=20.5
Q ss_pred CCceEEEEEecCcceEEEEEcCCCCE
Q 015802 8 KDSLFLGFDSSTQSLKATVLDSNLNI 33 (400)
Q Consensus 8 ~~~~~lgIDiGttsiKa~l~d~~G~~ 33 (400)
.+.+++|||+|+|++| ++|.+|++
T Consensus 4 ~~~~~lgiDIGGT~i~--~~d~~g~~ 27 (226)
T 3lm2_A 4 EDQTVLAIDIGGSHVK--IGLSTDGE 27 (226)
T ss_dssp GGCCEEEEEECSSEEE--EEETTTCC
T ss_pred cCCEEEEEEECCCEEE--EEECCCCE
Confidence 3468999999999999 57888886
No 49
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=96.43 E-value=0.0033 Score=58.87 Aligned_cols=64 Identities=13% Similarity=0.043 Sum_probs=43.7
Q ss_pred eEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhcCCCCC
Q 015802 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 90 (400)
++|+||+|.|++|.+++|. ++++...+.+++ . ++.+ ++...+..+++... .+.++
T Consensus 3 MlL~IDIGNT~iK~gl~d~-~~l~~~~r~~T~-~-----------~t~d----------e~~~~l~~ll~~~~--~~~~~ 57 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDG-DEIKLRFRHTSK-V-----------STSD----------ELGIFLKSVLRENN--CSPET 57 (266)
T ss_dssp CEEEEEECSSEEEEEEEET-TEEEEEEEEECS-C-----------CCHH----------HHHHHHHHHHHTTT--CCGGG
T ss_pred eEEEEEECCCeEEEEEEEC-CEEEEEEEecCC-C-----------CCHH----------HHHHHHHHHHHHcC--CChhh
Confidence 6899999999999999996 588877766653 1 2233 55444333333211 44568
Q ss_pred EeEEEeecc
Q 015802 91 VTAVSGSGQ 99 (400)
Q Consensus 91 I~aIgis~~ 99 (400)
|.+|+||+.
T Consensus 58 I~~iiISSV 66 (266)
T 3djc_A 58 IRKIAICSV 66 (266)
T ss_dssp CCEEEEEES
T ss_pred ceEEEEecc
Confidence 999999997
No 50
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=96.35 E-value=0.0032 Score=61.93 Aligned_cols=32 Identities=13% Similarity=0.287 Sum_probs=27.3
Q ss_pred ceEEEEEecCcceEEEEEcCCCCEEEEEEeecc
Q 015802 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFD 42 (400)
Q Consensus 10 ~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~ 42 (400)
+++||||+|+|++|++++|.+ +++...+.+++
T Consensus 2 ~~vlgidiGgt~ik~al~d~~-~il~~~~~~~~ 33 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFEDE-RMVKMQNFSHS 33 (381)
T ss_dssp CEEEEEEECSSEEEEEEEETT-EEEEEEEEECC
T ss_pred CeEEEEECCccceeEEEEecc-hheeeeecccC
Confidence 479999999999999999976 88887776653
No 51
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=96.16 E-value=0.0051 Score=67.36 Aligned_cols=122 Identities=16% Similarity=0.091 Sum_probs=70.5
Q ss_pred ceEEEEEecCcceEEEEEcCCCC----E-EEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhh
Q 015802 10 SLFLGFDSSTQSLKATVLDSNLN----I-VASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSK 84 (400)
Q Consensus 10 ~~~lgIDiGttsiKa~l~d~~G~----~-v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (400)
-.+||||+|+|++|++++|.+|+ + +...+.+++.. ....+.+ ++++.+.++++++++
T Consensus 78 G~~laiDlGGTnirv~lv~~~G~~~~~i~~~~~~~~ip~~--------~~~~~~~----------~lf~~Ia~~i~~~l~ 139 (917)
T 1cza_N 78 GDFIALDLGGSSFRILRVQVNHEKNQNVHMESEVYDTPEN--------IVHGSGS----------QLFDHVAECLGDFME 139 (917)
T ss_dssp EEEEEEEESSSSEEEEEEEEEEETTEEEEEEEEEECCCHH--------HHSSBHH----------HHHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCCeEEEEEEEecCCCcceEEEEEEEEECCcc--------cccCCHH----------HHHHHHHHHHHHHHH
Confidence 47899999999999999999876 4 44444444310 0112344 899999999999765
Q ss_pred c--CCCCC-EeEEEeecccceeeEec-CCCccc-cc---cCC--CCCCccccccccCC------CCCCccccCCChHHHH
Q 015802 85 S--LDLSK-VTAVSGSGQQHGSVYWK-KGSATI-LS---SLD--PKKPLVDQLGDAFS------TKESPVWMDSSTTAQC 148 (400)
Q Consensus 85 ~--~~~~~-I~aIgis~~~~~~v~~d-~~g~~~-~~---~~~--~~~pl~~~~~~~~~------~~~~i~w~D~R~~~~~ 148 (400)
. ...+. ..+|+++.+..- .+ .+|..+ +. ++. ...++.+.|+.++. +.++.+=||..+....
T Consensus 140 ~~~~~~~~~~lGi~fs~P~~q---~~~~~G~l~~wtkgfni~~~~g~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~ 216 (917)
T 1cza_N 140 KRKIKDKKLPVGFTFSFPCQQ---SKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMT 216 (917)
T ss_dssp HHTCTTSCCCEEEEECSCEEC---SSTTCCEECCCCTTCCCBTCTTSBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHH
T ss_pred hcCCCCCcccEEEEEcccccc---CcCCceEEEecccCCCCCcccCCchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHH
Confidence 3 22222 567888876331 01 122221 00 111 11256666665432 1235566777777766
Q ss_pred HHHH
Q 015802 149 REIE 152 (400)
Q Consensus 149 ~~~~ 152 (400)
+.+.
T Consensus 217 e~~~ 220 (917)
T 1cza_N 217 CGYD 220 (917)
T ss_dssp HHHH
T ss_pred hhcc
Confidence 6554
No 52
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=96.15 E-value=0.0083 Score=60.40 Aligned_cols=70 Identities=9% Similarity=0.031 Sum_probs=44.9
Q ss_pred ceEEEEEecCcceEEEEEcCCC-CE---EEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhc
Q 015802 10 SLFLGFDSSTQSLKATVLDSNL-NI---VASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS 85 (400)
Q Consensus 10 ~~~lgIDiGttsiKa~l~d~~G-~~---v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (400)
..+||||+|+||+|+++++.+| +- +...+...+... ...+.+ ++++.+.++++++++.
T Consensus 68 G~~lalDlGGTn~Rv~~V~l~G~~~~~~i~~~~~~ip~~~--------~~~~~~----------~lfd~Ia~~i~~~l~~ 129 (451)
T 1bdg_A 68 GNFLALDLGGTNYRVLSVTLEGKGKSPRIQERTYCIPAEK--------MSGSGT----------ELFKYIAETLADFLEN 129 (451)
T ss_dssp EEEEEEEESSSSEEEEEEEECC-CCCCEEEEEEECCCTTT--------TTSBHH----------HHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCCeEEEEEEecCCCCcceEEEEEEEecCCcc--------cCCCHH----------HHHHHHHHHHHHHHHh
Confidence 5799999999999999999988 51 112233333211 111334 8999999999998763
Q ss_pred --CCCCCEeEEEeec
Q 015802 86 --LDLSKVTAVSGSG 98 (400)
Q Consensus 86 --~~~~~I~aIgis~ 98 (400)
... +...|||+.
T Consensus 130 ~~~~~-~~~~lG~tf 143 (451)
T 1bdg_A 130 NGMKD-KKFDLGFTF 143 (451)
T ss_dssp TTCCS-SCEEEEEEE
T ss_pred cCCCc-cccceEEEE
Confidence 322 234555553
No 53
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=95.87 E-value=0.0077 Score=55.75 Aligned_cols=62 Identities=8% Similarity=0.150 Sum_probs=43.1
Q ss_pred eEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhcCCCCC
Q 015802 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 90 (400)
++|+||+|.|++|.+++| +++++...+.+++. .+..+ ++...+..+++. +..+
T Consensus 4 M~L~IDIGNT~ik~gl~~-~~~l~~~~r~~T~~-----------~~t~d----------e~~~~l~~l~~~-----~~~~ 56 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITE-DGKTFRRWRLSTGV-----------FQTED----------ELFSHLHPLLGD-----AMRE 56 (249)
T ss_dssp EEEEEEECSSEEEEEEES-SSSSCEEEEEECCT-----------TCCHH----------HHHHHHHHHHGG-----GGGG
T ss_pred eEEEEEECCCeEEEEEEE-CCEEEEEEEecCCC-----------CCCHH----------HHHHHHHHHHhh-----cccc
Confidence 689999999999999998 56777766665431 12334 666555554443 2357
Q ss_pred EeEEEeecc
Q 015802 91 VTAVSGSGQ 99 (400)
Q Consensus 91 I~aIgis~~ 99 (400)
|.+|.||+.
T Consensus 57 i~~i~IsSV 65 (249)
T 3bex_A 57 IKGIGVASV 65 (249)
T ss_dssp EEEEEEEES
T ss_pred CCEEEEEcC
Confidence 899999986
No 54
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=95.35 E-value=0.038 Score=54.94 Aligned_cols=76 Identities=18% Similarity=0.259 Sum_probs=51.1
Q ss_pred CCceEEEEEecCcceEEEEEcCC--C-CEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhh
Q 015802 8 KDSLFLGFDSSTQSLKATVLDSN--L-NIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSK 84 (400)
Q Consensus 8 ~~~~~lgIDiGttsiKa~l~d~~--G-~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (400)
++++++||||||++||+++...+ | ++++....+..-. ..+.-.|.+ ...+++.++++++-+
T Consensus 6 ~~~~ivglDIGts~I~~vv~~~~~~~~~i~g~~~~~s~gv------~~G~I~di~----------~~~~~I~~av~~ae~ 69 (419)
T 4a2a_A 6 KTVFYTSIDIGSRYIKGLVLGKRDQEWEALAFSSVKSRGL------DEGEIKDAI----------AFKESVNTLLKELEE 69 (419)
T ss_dssp -CCEEEEEEECSSEEEEEEEEC----CEEEEEEEEECCSE------ETTEESBHH----------HHHHHHHHHHHHHHH
T ss_pred cCCEEEEEEccCCEEEEEEEEEcCCCCEEEEEEEeccCCe------eCCEEEcHH----------HHHHHHHHHHHHHHH
Confidence 46799999999999999999743 3 7787776663211 123566777 888889999988754
Q ss_pred c--CCCCCEeEEEeecc
Q 015802 85 S--LDLSKVTAVSGSGQ 99 (400)
Q Consensus 85 ~--~~~~~I~aIgis~~ 99 (400)
. ..-++-..+++++.
T Consensus 70 ~~g~~i~~~v~v~i~g~ 86 (419)
T 4a2a_A 70 QLQKSLRSDFVISFSSV 86 (419)
T ss_dssp HHTSCCCSEEEEEECCT
T ss_pred HcCCCcCceEEEEEcCC
Confidence 2 33333145666664
No 55
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=95.23 E-value=0.021 Score=53.37 Aligned_cols=65 Identities=11% Similarity=0.142 Sum_probs=42.9
Q ss_pred eEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhcCCCCC
Q 015802 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 90 (400)
++|.||+|.|++|.+++| +++++...+..++. .+..+ ++...+.++++... ++..+
T Consensus 1 MlL~IDIGNT~ik~gl~~-~~~l~~~~r~~T~~-----------~~t~d----------e~~~~l~~ll~~~~--~~~~~ 56 (268)
T 2h3g_X 1 MIFVLDVGNTNAVLGVFE-EGELRQHWRMETDR-----------HKTED----------EYGMLVKQLLEHEG--LSFED 56 (268)
T ss_dssp CEEEEEECSSEEEEEEEE-TTEEEEEEEEECCT-----------TCCHH----------HHHHHHHHHHHHTT--CCGGG
T ss_pred CEEEEEECcCcEEEEEEE-CCEEEEEEEecCCC-----------cCCHH----------HHHHHHHHHHHHcC--CCccc
Confidence 478999999999999998 45777666655431 12233 55555555444321 34567
Q ss_pred EeEEEeecc
Q 015802 91 VTAVSGSGQ 99 (400)
Q Consensus 91 I~aIgis~~ 99 (400)
|.+|.||+.
T Consensus 57 i~~iiISSV 65 (268)
T 2h3g_X 57 VKGIIVSSV 65 (268)
T ss_dssp CCEEEEEES
T ss_pred CcEEEEEcc
Confidence 889999875
No 56
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=94.92 E-value=0.037 Score=56.02 Aligned_cols=59 Identities=14% Similarity=0.187 Sum_probs=38.6
Q ss_pred ceEEEEEecCcceEEEEEcCCCCE-EEEEEeeccCCCCCCCCCCceee-CCCCCCCcCCChhHHHHHHHHHHHHHhhc
Q 015802 10 SLFLGFDSSTQSLKATVLDSNLNI-VASEQLQFDSELPHYKTKDGVYR-DPSNNGRIVSPTLMWIEALDLMLQKLSKS 85 (400)
Q Consensus 10 ~~~lgIDiGttsiKa~l~d~~G~~-v~~~~~~~~~~~~~~~~~g~~e~-d~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (400)
-.+|+||+|+|++|+++++.+|+- ....+..+++ |.. ..+ +.+ ++++.+.+++++.++.
T Consensus 80 G~~LalDlGGTn~Rv~~V~l~g~~~~~~~~~~~~I--p~~-----~~~~~~~----------~lfd~Ia~~i~~fl~~ 140 (485)
T 3o8m_A 80 GDFLALDLGGTNLRVVLVKLGGNHDFDTTQNKYRL--PDH-----LRTGTSE----------QLWSFIAKCLKEFVDE 140 (485)
T ss_dssp EEEEEEEESSSEEEEEEEEEESSSCEEEEEEEEEC--CTT-----GGGSBHH----------HHHHHHHHHHHHHHHH
T ss_pred eEEEEEEecCCeEEEEEEEECCCCceEEEEEEEec--Cch-----hccCCHH----------HHHHHHHHHHHHHHHH
Confidence 389999999999999999987761 1111222221 111 111 234 8999999999987653
No 57
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=94.88 E-value=0.023 Score=62.17 Aligned_cols=73 Identities=7% Similarity=0.052 Sum_probs=46.8
Q ss_pred CceEEEEEecCcceEEEEEcCC-CC--EEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhc
Q 015802 9 DSLFLGFDSSTQSLKATVLDSN-LN--IVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS 85 (400)
Q Consensus 9 ~~~~lgIDiGttsiKa~l~d~~-G~--~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (400)
+..+||||+|+||+|+++++.+ |+ ++...+..+.. |.+ -...+.+ ++++.+.++++++++.
T Consensus 525 ~G~~lalDlGGTn~Rv~~V~l~~g~~~~~~~~~~~~~i--p~~----~~~~~~~----------~lfd~Ia~~i~~~l~~ 588 (917)
T 1cza_N 525 NGDFLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAI--PIE----IMQGTGE----------ELFDHIVSCISDFLDY 588 (917)
T ss_dssp CEEEEEEEESSSSEEEEEEEEECSTTCEEEEEEEEECC--CHH----HHTSBHH----------HHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEECCCcEEEEEEEeCCCcceeEEeeeeEEec--Ccc----cccCCHH----------HHHHHHHHHHHHHHHH
Confidence 4589999999999999999985 65 66554444432 111 0011234 8999999999987753
Q ss_pred --CCCCCEeEEEeec
Q 015802 86 --LDLSKVTAVSGSG 98 (400)
Q Consensus 86 --~~~~~I~aIgis~ 98 (400)
...+++ .|||+.
T Consensus 589 ~~~~~~~l-~lG~tf 602 (917)
T 1cza_N 589 MGIKGPRM-PLGFTF 602 (917)
T ss_dssp HTCCSSCC-EEEEEE
T ss_pred cCCCccce-eEEEEe
Confidence 333333 455553
No 58
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=94.61 E-value=0.019 Score=59.86 Aligned_cols=87 Identities=11% Similarity=0.114 Sum_probs=55.1
Q ss_pred CCceEEEEEecCcceEEEEEcC-CCCEEEEEEeeccCCCCCCCCC-----CceeeCCCCCCCcCCChhHHHHHHHHHHHH
Q 015802 8 KDSLFLGFDSSTQSLKATVLDS-NLNIVASEQLQFDSELPHYKTK-----DGVYRDPSNNGRIVSPTLMWIEALDLMLQK 81 (400)
Q Consensus 8 ~~~~~lgIDiGttsiKa~l~d~-~G~~v~~~~~~~~~~~~~~~~~-----g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~ 81 (400)
+..|-++||||||.+.+.++|. +|+++++.+.-++...... + .++.+++++. +.=-..+.+.+..++++
T Consensus 204 ~~~~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ~~~G~--DVisRI~~a~~~~~g~---~~L~~~v~~~in~li~~ 278 (631)
T 3zyy_X 204 QRVFGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQAAFGD--DVISRIIYVDENPDGA---EKLRKAVLSTINELIFQ 278 (631)
T ss_dssp CCCEEEEEEECSSEEEEEEEETTTCCEEEEEEEECGGGGTCS--SHHHHHHHHHHCTTHH---HHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEecccceeEEEEECCCCCEEEeecccCCCCCcch--HHHHHHHHHhcCcccH---HHHHHHHHHHHHHHHHH
Confidence 3458899999999999999995 8999999988776422110 0 0111233300 00001244455566666
Q ss_pred Hhhc--CCCCCEeEEEeecc
Q 015802 82 LSKS--LDLSKVTAVSGSGQ 99 (400)
Q Consensus 82 l~~~--~~~~~I~aIgis~~ 99 (400)
+.+. +++++|..|.|++.
T Consensus 279 l~~~~~i~~~~I~~~~v~GN 298 (631)
T 3zyy_X 279 LCKEHGVEKKEIMAAVVAGN 298 (631)
T ss_dssp HHHHHTCCGGGEEEEEEEEC
T ss_pred HHHHcCCCHHHeeEEEEEcc
Confidence 6543 67889999999863
No 59
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=94.30 E-value=0.057 Score=52.40 Aligned_cols=74 Identities=14% Similarity=0.117 Sum_probs=45.5
Q ss_pred CCceEEEEEecCcceEEEEEcCCCC--EEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhc
Q 015802 8 KDSLFLGFDSSTQSLKATVLDSNLN--IVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS 85 (400)
Q Consensus 8 ~~~~~lgIDiGttsiKa~l~d~~G~--~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (400)
+++.++|||||||++|++++. +|+ +......+.+...-. .+.-.|++ .+.+++.+++++.-
T Consensus 11 ~~~~~vgiDiGt~~i~~~~~~-~~~~~i~~~g~~~~ps~~~~----~g~i~d~~----------~~~~~ik~~~~~~~-- 73 (377)
T 2ych_A 11 PRVEALGLEIGASALKLVEVS-GNPPALKALASRPTPPGLLM----EGMVAEPA----------ALAQEIKELLLEAR-- 73 (377)
T ss_dssp CCCCCEEEEECSSEEEEEEEE-TTTTEEEEEEEEECCTTSEE----TTEESCHH----------HHHHHHHHHHHHHT--
T ss_pred CCCceEEEEeCCCeEEEEEEe-CCceEEEEEEeEECCCCccc----CCCcCCHH----------HHHHHHHHHHHHcC--
Confidence 446789999999999999996 555 544555555422111 12445666 77777777777632
Q ss_pred CCCCCEeEEEeecc
Q 015802 86 LDLSKVTAVSGSGQ 99 (400)
Q Consensus 86 ~~~~~I~aIgis~~ 99 (400)
....+ ..+++++.
T Consensus 74 ~~~~~-v~~~i~~~ 86 (377)
T 2ych_A 74 TRKRY-VVTALSNL 86 (377)
T ss_dssp CCCCE-EEEEECGG
T ss_pred CCcce-EEEEecCC
Confidence 22222 34666653
No 60
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=91.11 E-value=0.28 Score=46.97 Aligned_cols=31 Identities=29% Similarity=0.374 Sum_probs=22.4
Q ss_pred eEEEEEecCcceEEEEEcCCCCEEEEEEeecc
Q 015802 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFD 42 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~ 42 (400)
++||+|||+-++|+++++.+|++ ...+..+|
T Consensus 1 ~iiG~DIGGAn~K~a~~~~~g~~-~~~~~~~P 31 (334)
T 3cet_A 1 MILGIDIGGANTKITELHENGEF-KVHHLYFP 31 (334)
T ss_dssp CEEEEEEC--CEEEEEECSTTCC-EEEEC---
T ss_pred CeeEEEecccceeeeeecCCCce-EEEEEecC
Confidence 47999999999999999989998 65555554
No 61
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=89.74 E-value=0.32 Score=48.49 Aligned_cols=71 Identities=13% Similarity=0.102 Sum_probs=44.2
Q ss_pred eEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceee-CCCCCCCcCCChhHHHHHHHHHHHHHhhc--C-
Q 015802 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYR-DPSNNGRIVSPTLMWIEALDLMLQKLSKS--L- 86 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~-d~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~- 86 (400)
.+|+||+|+||.|+++++..|. +...+..++. |.. ..+ ..+ ++++-+.+++++.++. .
T Consensus 60 ~~LAlDlGGTn~RV~~V~l~g~-~~~~~~~~~i--p~~-----~~~g~~~----------~LFd~Ia~~i~~fl~~~~~~ 121 (445)
T 3hm8_A 60 DFLALDLGGTNFRVLLVRVTTG-VQITSEIYSI--PET-----VAQGSGQ----------QLFDHIVDCIVDFQQKQGLS 121 (445)
T ss_dssp EEEEEEESSSSEEEEEEEESSS-EEEEEEEECC--CHH-----HHTSBHH----------HHHHHHHHHHHHHHHHHTCT
T ss_pred EEEEEEecCCeEEEEEEEECCc-eEEEEEEecc--Ccc-----ccCCCHH----------HHHHHHHHHHHHHHHHhCcc
Confidence 7999999999999999998776 3333333331 110 111 223 8999999999987653 2
Q ss_pred CCCCEeEEEeecc
Q 015802 87 DLSKVTAVSGSGQ 99 (400)
Q Consensus 87 ~~~~I~aIgis~~ 99 (400)
+..--.++.||-+
T Consensus 122 ~~~lplGftFSFP 134 (445)
T 3hm8_A 122 GQSLPLGFTFSFP 134 (445)
T ss_dssp TCCCCEEEEECSC
T ss_pred cccCcceEEEeee
Confidence 1222345555544
No 62
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=89.62 E-value=0.34 Score=48.73 Aligned_cols=65 Identities=14% Similarity=0.255 Sum_probs=41.8
Q ss_pred CCCCCc---eEEEEEecCcceEEEEEcCCCC-----EEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHH
Q 015802 5 SLPKDS---LFLGFDSSTQSLKATVLDSNLN-----IVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALD 76 (400)
Q Consensus 5 ~~~~~~---~~lgIDiGttsiKa~l~d~~G~-----~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~ 76 (400)
++++.+ .+|+||+|+||.|+++++-.|+ .+...+..|++ |+. -..-..+ ++++-+.
T Consensus 69 ~lP~G~E~G~fLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~~~I--p~~----l~~gt~~----------eLFd~IA 132 (470)
T 3f9m_A 69 STPEGSEVGDFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSI--PED----AMTGTAE----------MLFDYIS 132 (470)
T ss_dssp SSCCCCCCEEEEEEEESSSEEEEEEEEEEC----CEEEEEEEEEEEC--CHH----HHSSBHH----------HHHHHHH
T ss_pred cCCCCCcceEEEEEEecCceEEEEEEEECCCCCCcceEEEEEEeecC--ChH----hccCCHH----------HHHHHHH
Confidence 345443 7999999999999999996543 34434444431 211 0011223 8999999
Q ss_pred HHHHHHhhc
Q 015802 77 LMLQKLSKS 85 (400)
Q Consensus 77 ~~~~~l~~~ 85 (400)
+|+++.++.
T Consensus 133 ~~i~~fl~~ 141 (470)
T 3f9m_A 133 ECISDFLDK 141 (470)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 999997763
No 63
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=88.96 E-value=0.42 Score=45.70 Aligned_cols=32 Identities=13% Similarity=0.232 Sum_probs=27.2
Q ss_pred CceEEEEEecCcceEEEEEcCCCCEEEEEEee
Q 015802 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQ 40 (400)
Q Consensus 9 ~~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~ 40 (400)
+..+|+||-||||.|+-++|.+|+++.+.+.+
T Consensus 6 ~~~~IavDWGTSnlRa~l~~~~g~vl~~~~~~ 37 (330)
T 3t69_A 6 AGYYAAVDWGTSSFRLWIIGEDGAVLAERRSA 37 (330)
T ss_dssp --CEEEEEECSSCEEEEEECTTSCEEEEEEES
T ss_pred CCCEEEEEecchheehheecCCCCchhhhcCC
Confidence 35799999999999999999999999876554
No 64
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=88.36 E-value=1.4 Score=41.51 Aligned_cols=32 Identities=16% Similarity=0.238 Sum_probs=27.4
Q ss_pred ceEEEEEecCcceEEEEEcCCCCEEEEEEeecc
Q 015802 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFD 42 (400)
Q Consensus 10 ~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~ 42 (400)
..+|+||-||||.|+-++| +|+++.+.+.+..
T Consensus 6 ~~~IavDWGTs~lRa~l~~-~g~vl~~~~~~~G 37 (295)
T 3nuw_A 6 ARYIAIDWGSTNLRAWLYQ-GEECLESRQSEAG 37 (295)
T ss_dssp CEEEEEEECSSCEEEEEEE-TTEEEEEEEESCC
T ss_pred ccEEEEEecchheeeeeec-CCceehhhcCCCc
Confidence 4789999999999999999 8999987766543
No 65
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=87.51 E-value=0.45 Score=44.72 Aligned_cols=27 Identities=11% Similarity=0.108 Sum_probs=21.6
Q ss_pred CceEEEEEecCcceEEEEEcCCCCEEEE
Q 015802 9 DSLFLGFDSSTQSLKATVLDSNLNIVAS 36 (400)
Q Consensus 9 ~~~~lgIDiGttsiKa~l~d~~G~~v~~ 36 (400)
..+.+|||+|+|.+|++++ ++++++..
T Consensus 19 ~~~~iGIDiGsTt~K~V~~-~~~~i~~~ 45 (287)
T 2ews_A 19 SHMKVGIDAGGTLIKIVQE-QDNQRTFK 45 (287)
T ss_dssp --CEEEEEECSSEEEEEEE-CSSCEEEE
T ss_pred CCeEEEEEEChhhEEEEEE-cCCEEEEE
Confidence 3479999999999999999 56677754
No 66
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=84.66 E-value=1.2 Score=43.99 Aligned_cols=36 Identities=25% Similarity=0.243 Sum_probs=27.6
Q ss_pred CCCCCceEEEEEecCcceEEEEEcC-CCCEEEEEEee
Q 015802 5 SLPKDSLFLGFDSSTQSLKATVLDS-NLNIVASEQLQ 40 (400)
Q Consensus 5 ~~~~~~~~lgIDiGttsiKa~l~d~-~G~~v~~~~~~ 40 (400)
+.|+.+++|.|..|+||+|..|||. +++++.+..++
T Consensus 14 ~~Ms~klILviN~GSSS~K~~lf~~~~~~~l~~G~~e 50 (415)
T 3sk3_A 14 SHMSSKLVLVLNCGSSSLKFAIIDAVNGDEYLSGLAE 50 (415)
T ss_dssp ----CCEEEEEEECSSCEEEEEEETTTCCEEEEEEEE
T ss_pred ccCCCCeEEEEeCchHhhhheeEECCCCCEEEEeeEe
Confidence 5688999999999999999999994 77888776543
No 67
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=83.33 E-value=2.2 Score=40.61 Aligned_cols=73 Identities=14% Similarity=0.183 Sum_probs=42.3
Q ss_pred eEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhc--CCC
Q 015802 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--LDL 88 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~ 88 (400)
++||||.++..+++++++. |++++.....+.. +..| . .|+ ....+| .+.+..+++++++. ++.
T Consensus 2 ~iLgIdts~~~~~val~~~-g~i~~~~~~~~~~--~~gg---~---~p~--~~~~~h----~~~l~~~i~~~L~~agi~~ 66 (330)
T 2ivn_A 2 LALGIEGTAHTLGIGIVSE-DKVLANVFDTLTT--EKGG---I---HPK--EAAEHH----ARLMKPLLRKALSEAGVSL 66 (330)
T ss_dssp CEEEEECSSSEEEEEEECS-SCEEEEEEEECCC--TTCC---C---CHH--HHHHHH----HHHHHHHHHHHHHHHTCCT
T ss_pred EEEEEEccCCCeEEEEEEC-CEEEEEEEEEeec--ccCC---c---Cch--hhHHHH----HHHHHHHHHHHHHHcCCCH
Confidence 5899999999999999974 5888665554431 1111 1 121 000111 22333444444432 667
Q ss_pred CCEeEEEeec
Q 015802 89 SKVTAVSGSG 98 (400)
Q Consensus 89 ~~I~aIgis~ 98 (400)
++|.+|+++.
T Consensus 67 ~did~Ia~~~ 76 (330)
T 2ivn_A 67 DDIDVIAFSQ 76 (330)
T ss_dssp TTCCEEEEEE
T ss_pred HHCcEEEEEC
Confidence 8899998863
No 68
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=83.07 E-value=1.4 Score=42.36 Aligned_cols=80 Identities=10% Similarity=0.019 Sum_probs=42.5
Q ss_pred ceEEEEEecCcceEEEEEcCC--CCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhh---
Q 015802 10 SLFLGFDSSTQSLKATVLDSN--LNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSK--- 84 (400)
Q Consensus 10 ~~~lgIDiGttsiKa~l~d~~--G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~--- 84 (400)
+.+.+||+||.|+|..+++.+ |......+.....+.-+.- ......++ +-.+...+++++..+
T Consensus 16 ~~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrLg~g~-~~~g~ls~-----------eai~r~~~aL~~f~~~~~ 83 (343)
T 3cer_A 16 VTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQDV-DKTHRFAD-----------EALERAYVAAREFAGVIA 83 (343)
T ss_dssp EEEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCTTTTH-HHHSSCCH-----------HHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeCCCCc-cccCCcCH-----------HHHHHHHHHHHHHHHHHH
Confidence 478999999999999999853 4333333333333332210 00011122 233344444444333
Q ss_pred cCCCCCEeEEEeecccc
Q 015802 85 SLDLSKVTAVSGSGQQH 101 (400)
Q Consensus 85 ~~~~~~I~aIgis~~~~ 101 (400)
.....+|++++-++.+.
T Consensus 84 ~~~v~~v~~vATsA~R~ 100 (343)
T 3cer_A 84 EHPIDGLRFVATSATRD 100 (343)
T ss_dssp TSCCSEEEEEECHHHHH
T ss_pred HCCCCeEEEEecHHHHc
Confidence 24456788887777643
No 69
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=81.90 E-value=1.9 Score=43.81 Aligned_cols=83 Identities=11% Similarity=0.047 Sum_probs=44.2
Q ss_pred CCCceEEEEEecCcceEEEEEcC-CCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhh-
Q 015802 7 PKDSLFLGFDSSTQSLKATVLDS-NLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSK- 84 (400)
Q Consensus 7 ~~~~~~lgIDiGttsiKa~l~d~-~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~- 84 (400)
|+.+.+.+||+||.|+|..+++. +|.+....+....++.-+.-.+ ....++ +-.+...+++++..+
T Consensus 8 ~~~~~~AaIDiGSNSirL~I~~~~~~~~~~l~~~k~~vrLg~g~~~-~g~Ls~-----------eai~r~~~~L~~f~~~ 75 (513)
T 1u6z_A 8 PRPQEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGP-DNMLSE-----------EAMTRGLNCLSLFAER 75 (513)
T ss_dssp ----CEEEEEECSSCEEEEEEEEETTEEEEEEEEEECCCTGGGBCT-TCCBCH-----------HHHHHHHHHHHHHHHH
T ss_pred ccCCeEEEEEeccccEEEEEEEEcCCeeEEEEeeEEEEeccCcccc-cCCcCH-----------HHHHHHHHHHHHHHHH
Confidence 45567999999999999999996 4434333333333333221000 011122 233444445555433
Q ss_pred --cCCCCCEeEEEeecccc
Q 015802 85 --SLDLSKVTAVSGSGQQH 101 (400)
Q Consensus 85 --~~~~~~I~aIgis~~~~ 101 (400)
.....+|.+++-++.+.
T Consensus 76 ~~~~~v~~v~~vATsA~R~ 94 (513)
T 1u6z_A 76 LQGFSPASVCIVGTHTLRQ 94 (513)
T ss_dssp TTTCCGGGEEEEECHHHHH
T ss_pred HHhCCCCEEEEEecHHHHc
Confidence 24556899988887643
No 70
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=81.52 E-value=3 Score=39.48 Aligned_cols=78 Identities=13% Similarity=-0.002 Sum_probs=41.7
Q ss_pred eEEEEEecCcceEEEEEcC-CCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHh---hcC
Q 015802 11 LFLGFDSSTQSLKATVLDS-NLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLS---KSL 86 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~-~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~ 86 (400)
.+.+||+||.|+|..+++. ++......+....++.-+.-.. ....+++ . .+...+++++.. +..
T Consensus 5 ~~A~IDiGSNsirL~I~~~~~~~~~~i~~~k~~vrLg~g~~~-~g~ls~e----------a-i~r~~~~L~~f~~~~~~~ 72 (315)
T 3mdq_A 5 RIGVIDMGTNTFHLLITDIVNDRPHTLVNEKSAVGLGKGGIT-KGFITEE----------A-MDRALDTLKKFRVILDEH 72 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCSSTTTGG-GTCCCHH----------H-HHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEecCCcEEEEEEEEcCCceEEeeeceeeeeccccccc-cCCcCHH----------H-HHHHHHHHHHHHHHHHHc
Confidence 4788999999999999985 3444333333333333221000 0111222 2 333444444433 224
Q ss_pred CCCCEeEEEeeccc
Q 015802 87 DLSKVTAVSGSGQQ 100 (400)
Q Consensus 87 ~~~~I~aIgis~~~ 100 (400)
..++|++++-++.+
T Consensus 73 ~v~~v~~vATsA~R 86 (315)
T 3mdq_A 73 AVVHVIATGTSAVR 86 (315)
T ss_dssp TCCEEEEEECHHHH
T ss_pred CCCEEEEEeeHHHH
Confidence 56778888877764
No 71
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=80.70 E-value=3.1 Score=42.31 Aligned_cols=78 Identities=9% Similarity=0.223 Sum_probs=50.5
Q ss_pred CCCceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhcC
Q 015802 7 PKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSL 86 (400)
Q Consensus 7 ~~~~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 86 (400)
|++.++||||-.+..+-++|++.+++++......... .. |++ -|+ ....+|.+.+...+.+++++ +
T Consensus 3 m~~m~iL~i~ts~~~~~~al~~~~~~~~~~~~~~~~~---~~---gg~--~p~--~a~~~h~~~l~~~i~~~l~~----~ 68 (540)
T 3en9_A 3 MDPMICLGLEGTAEKTGVGIVTSDGEVLFNKTIMYKP---PK---QGI--NPR--EAADHHAETFPKLIKEAFEV----V 68 (540)
T ss_dssp CCSCEEEEEECSSSEEEEEEEETTSCEEEEEEEECCC---CC---SSS--SCC--CHHHHHHHHHHHHHHHHHHH----S
T ss_pred cccceEEEEEcCccceEEEEEECCCeEEEEEEEeecC---CC---CCC--ChH--HHHHHHHHHHHHHHHHHHHh----C
Confidence 5567899999999999999999888898877655321 11 122 222 12234444555555566655 3
Q ss_pred CCCCEeEEEeec
Q 015802 87 DLSKVTAVSGSG 98 (400)
Q Consensus 87 ~~~~I~aIgis~ 98 (400)
+.++|.+|+++.
T Consensus 69 ~~~~id~ia~~~ 80 (540)
T 3en9_A 69 DKNEIDLIAFSQ 80 (540)
T ss_dssp CGGGCCEEEEEE
T ss_pred CHhHCcEEEEec
Confidence 456788888874
No 72
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=78.93 E-value=2.5 Score=40.34 Aligned_cols=79 Identities=15% Similarity=0.277 Sum_probs=46.4
Q ss_pred CCCceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhcC
Q 015802 7 PKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSL 86 (400)
Q Consensus 7 ~~~~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 86 (400)
|++.++||||-.+..+-++|++ ++++++.....+.. .. |++. |+ ...++|.+.+...+..++++.- +
T Consensus 3 ~~~M~iLgIdts~~~~svAl~~-~~~i~~~~~~~~~~---~~---gGv~--p~--~a~~~H~~~l~~~i~~~L~~ag--~ 69 (334)
T 3eno_A 3 MDPMIVLGLEGTAHTISCGIID-ESRILAMESSMYRP---KT---GGIR--PL--DAAVHHSEVIDTVISRALEKAK--I 69 (334)
T ss_dssp CCCCEEEEEECSSSEEEEEEEE-SSCCCEEEEEECCC---SS---CSCC--HH--HHHHHHHHHHHHHHHHHHHHHT--C
T ss_pred ccCceEEEEECCCcCeEEEEEE-CCEEEEEEEEeecc---cc---CCcC--cc--hHHHHHHHHHHHHHHHHHHHcC--C
Confidence 6778899999998889999998 55788765444321 11 1121 11 0011222234444444444432 5
Q ss_pred CCCCEeEEEeec
Q 015802 87 DLSKVTAVSGSG 98 (400)
Q Consensus 87 ~~~~I~aIgis~ 98 (400)
+.++|.+|+++.
T Consensus 70 ~~~did~Iav~~ 81 (334)
T 3eno_A 70 SIHDIDLIGFSM 81 (334)
T ss_dssp CGGGCCEEEEEC
T ss_pred CHHHCCEEEEEc
Confidence 678899999885
No 73
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=78.38 E-value=1.2 Score=43.04 Aligned_cols=22 Identities=23% Similarity=0.243 Sum_probs=18.7
Q ss_pred ceEEEEEecCcceEEEEEcCCCC
Q 015802 10 SLFLGFDSSTQSLKATVLDSNLN 32 (400)
Q Consensus 10 ~~~lgIDiGttsiKa~l~d~~G~ 32 (400)
+.++|||+|||++++++++ +|+
T Consensus 18 ~~viGID~GTt~s~va~~~-~g~ 39 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMK-NGK 39 (394)
T ss_dssp CSCEEEEECSSEEEEEEEC-SSC
T ss_pred CCEEEEEeCcCcEEEEEEE-CCe
Confidence 5789999999999999886 444
No 74
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=78.26 E-value=7.5 Score=37.85 Aligned_cols=66 Identities=17% Similarity=0.077 Sum_probs=41.9
Q ss_pred EEEEEecCcceEEEEEcC-CCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhc-C--C
Q 015802 12 FLGFDSSTQSLKATVLDS-NLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS-L--D 87 (400)
Q Consensus 12 ~lgIDiGttsiKa~l~d~-~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~--~ 87 (400)
+|.|..|+||+|..|||. +.+++++..++- .-.+ +.+.. .--.++..+++.|.+. . +
T Consensus 14 iLviN~GSSSlK~~l~~~~~~~~l~~G~~e~-ig~~--------~~~~~----------~h~~a~~~il~~L~~~~~~~~ 74 (391)
T 3r9p_A 14 VLVINSGSSSLKFQLVDPEFGVAASTGIVER-IGEE--------SSPVP----------DHDAALRRAFDMLAGDGVDLN 74 (391)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEECC-TTCT--------TCSCC----------SHHHHHHHHHHHHHHTTCCTT
T ss_pred EEEEecCchhheeEEEecCCCceEEEEEEee-cCCC--------ccCcc----------CHHHHHHHHHHHHHhcCCCCc
Confidence 889999999999999996 566676665541 1000 11222 2345666666666654 2 3
Q ss_pred CCCEeEEEe
Q 015802 88 LSKVTAVSG 96 (400)
Q Consensus 88 ~~~I~aIgi 96 (400)
..+|.+||-
T Consensus 75 ~~~i~aVGh 83 (391)
T 3r9p_A 75 TAGLVAVGH 83 (391)
T ss_dssp TTTEEEEEE
T ss_pred ccceeEEec
Confidence 468999963
No 75
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=78.15 E-value=3.2 Score=39.26 Aligned_cols=23 Identities=13% Similarity=0.170 Sum_probs=19.3
Q ss_pred eEEEEEecCcceEEEEEcC-CCCE
Q 015802 11 LFLGFDSSTQSLKATVLDS-NLNI 33 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~-~G~~ 33 (400)
.+.+||+||+|+|..+++. ++.+
T Consensus 13 ~~a~IDiGSns~rl~I~~~~~~~~ 36 (315)
T 1t6c_A 13 RVASIDIGSYSVRLTIAQIKDGKL 36 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEE
T ss_pred EEEEEEECcCcEEEEEEEEcCCcE
Confidence 5889999999999999996 4433
No 76
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=77.26 E-value=1.2 Score=43.40 Aligned_cols=23 Identities=4% Similarity=0.046 Sum_probs=19.2
Q ss_pred ceEEEEEecCcceEEEEEcCCCCE
Q 015802 10 SLFLGFDSSTQSLKATVLDSNLNI 33 (400)
Q Consensus 10 ~~~lgIDiGttsiKa~l~d~~G~~ 33 (400)
++++|||+|||+++++++ .+|++
T Consensus 13 ~~vvGIDlGTt~s~va~~-~~g~~ 35 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHT-VDDKA 35 (409)
T ss_dssp CCEEEEEECSSEEEEEEE-ETTEE
T ss_pred CcEEEEEcCCCeEEEEEE-eCCce
Confidence 579999999999999998 45543
No 77
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=76.21 E-value=2.9 Score=38.74 Aligned_cols=30 Identities=23% Similarity=0.292 Sum_probs=24.0
Q ss_pred ceEEEEEecCcceEEEEEcCCCCEEEEEEe
Q 015802 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQL 39 (400)
Q Consensus 10 ~~~lgIDiGttsiKa~l~d~~G~~v~~~~~ 39 (400)
.++|.||+|-|++|..++|.+++++...+.
T Consensus 23 ~M~L~IDiGNT~ik~g~~~~~~~~~~~~r~ 52 (271)
T 2f9w_A 23 SMILELDCGNSLIKWRVIEGAARSVAGGLA 52 (271)
T ss_dssp CEEEEEEECSSCEEEEEEETTTEEEEEEEE
T ss_pred CcEEEEEeCCCeeEEEEEeCCCEEEEEEEe
Confidence 478999999999999999865666655443
No 78
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=74.29 E-value=12 Score=36.55 Aligned_cols=30 Identities=23% Similarity=0.240 Sum_probs=23.8
Q ss_pred ceEEEEEecCcceEEEEEcC-CCCEEEEEEe
Q 015802 10 SLFLGFDSSTQSLKATVLDS-NLNIVASEQL 39 (400)
Q Consensus 10 ~~~lgIDiGttsiKa~l~d~-~G~~v~~~~~ 39 (400)
..+|.|..|+||+|..|||. +.+++.+...
T Consensus 23 ~~ILviN~GSSS~K~~l~~~~~~~~l~~g~~ 53 (398)
T 4ijn_A 23 VTVLVVNSGSSSLKYAVVRPASGEFLADGII 53 (398)
T ss_dssp CEEEEEEECSSCEEEEEECTTTCCEEEEEEE
T ss_pred ccEEEEeCCchhheEEEEECCCCceeeeeee
Confidence 35899999999999999996 4456666644
No 79
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=73.74 E-value=3.5 Score=39.97 Aligned_cols=88 Identities=14% Similarity=0.153 Sum_probs=53.0
Q ss_pred CCCceEEEEEecCc--ceEEEEEcCCCC---EEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhH-------HHHH
Q 015802 7 PKDSLFLGFDSSTQ--SLKATVLDSNLN---IVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLM-------WIEA 74 (400)
Q Consensus 7 ~~~~~~lgIDiGtt--siKa~l~d~~G~---~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~-------~~~~ 74 (400)
|++.++||+=.||| .|-+++++.+|+ ++...+++|+.....- -..-..+. ..+..+ +-+.
T Consensus 2 ~~~~~~iGlMSGTSlDGiD~alv~~~~~~~~~~~~~~~pyp~~lr~~---l~~~~~~~-----~~~~~~~~~l~~~lg~~ 73 (370)
T 3cqy_A 2 MNKAYYIGLMSGTSMDGVDAVLVDFAGEQPQLIGTHTETIPTHLLKG---LQRLCLPG-----TDEINRLGRLDRSVGKL 73 (370)
T ss_dssp TTCCEEEEEEECTTCCCEEEEEEECSSSSCEEEEEEEECCCHHHHHH---HHGGGCTT-----SCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEecccchhhHeEEEEEEeCCeEEEEeeeeecCCHHHHHH---HHHhcCCC-----CCCHHHHHHHHHHHHHH
Confidence 67788999999998 699999998764 6777777776321100 00001111 000101 2222
Q ss_pred HHHHHHHHhhc--CCCCCEeEEEeecccceee
Q 015802 75 LDLMLQKLSKS--LDLSKVTAVSGSGQQHGSV 104 (400)
Q Consensus 75 ~~~~~~~l~~~--~~~~~I~aIgis~~~~~~v 104 (400)
+.++++++++. +++++|.+||..+| ++.
T Consensus 74 ~a~av~~~l~~~~~~~~~i~~IGsHGQ--Tv~ 103 (370)
T 3cqy_A 74 FALAVNNLLAKTKIAKDEIIAIGSHGQ--TVR 103 (370)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEEEEEE--EEE
T ss_pred HHHHHHHHHHHcCCCcccccEEEeCCc--ccc
Confidence 34555555543 67789999999998 554
No 80
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=73.72 E-value=2 Score=44.04 Aligned_cols=23 Identities=17% Similarity=0.107 Sum_probs=19.5
Q ss_pred CCCceEEEEEecCcceEEEEEcC
Q 015802 7 PKDSLFLGFDSSTQSLKATVLDS 29 (400)
Q Consensus 7 ~~~~~~lgIDiGttsiKa~l~d~ 29 (400)
|.+..++|||+|||+..+++++.
T Consensus 1 M~m~~~iGIDlGTt~s~va~~~~ 23 (554)
T 1yuw_A 1 MSKGPAVGIDLGTTYSCVGVFQH 23 (554)
T ss_dssp CCSCCCEEEEECSSEEEEEEECS
T ss_pred CCCCCEEEEEeCcccEEEEEEEC
Confidence 56667899999999999998863
No 81
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=73.04 E-value=6.1 Score=39.96 Aligned_cols=80 Identities=11% Similarity=0.102 Sum_probs=45.9
Q ss_pred CCCCCceEEEEEecCcceEEEEEcCC-C--CEEEEEEeeccCCCCCCCCCCce---eeCCCCCCCcCCChhHHHHHHHHH
Q 015802 5 SLPKDSLFLGFDSSTQSLKATVLDSN-L--NIVASEQLQFDSELPHYKTKDGV---YRDPSNNGRIVSPTLMWIEALDLM 78 (400)
Q Consensus 5 ~~~~~~~~lgIDiGttsiKa~l~d~~-G--~~v~~~~~~~~~~~~~~~~~g~~---e~d~~~~~~~~~~~~~~~~~~~~~ 78 (400)
.+...+.+.+||+||.|+|.++++.+ + +++...+... +.-+ |-. ..+++ -.+...++
T Consensus 10 ~~~~~~~~AaIDiGSNS~rL~I~~~~~~~~~~~~~~k~~v--rLg~----gl~~~g~Ls~e-----------ai~r~~~~ 72 (508)
T 3hi0_A 10 RLTGLAPVSVIDIGSNSVRLVVYEGLSRAPAVLFNEKVLC--GLGK----GLALTGRMHEE-----------GVTRALMA 72 (508)
T ss_dssp SCTTCCCEEEEEECSSEEEEEEESCSSSSCCEEEEEEEEC--CTTT----THHHHSSCCHH-----------HHHHHHHH
T ss_pred ccccCCeEEEEEECCccEEEEEEEEcCCCceEEEEEeEEe--eccc----CccccCCcCHH-----------HHHHHHHH
Confidence 34445678999999999999999964 3 3444443332 2221 111 12222 23344444
Q ss_pred HHHH---hhcCCCCCEeEEEeecccc
Q 015802 79 LQKL---SKSLDLSKVTAVSGSGQQH 101 (400)
Q Consensus 79 ~~~l---~~~~~~~~I~aIgis~~~~ 101 (400)
++.. ++.....+|++++-++.+.
T Consensus 73 L~~F~~~~~~~~v~~v~~vATsA~R~ 98 (508)
T 3hi0_A 73 LRRFHVLSEQAQAQKLYVLATAAARE 98 (508)
T ss_dssp HHHHHHHHHHTTCSEEEEEECTHHHH
T ss_pred HHHHHHHHHhCCCCeEEEEeeHHHHc
Confidence 4443 3335567899988887643
No 82
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=72.25 E-value=2.7 Score=39.50 Aligned_cols=24 Identities=17% Similarity=0.231 Sum_probs=20.5
Q ss_pred eEEEEEecCcceEEEEEcCCCCEE
Q 015802 11 LFLGFDSSTQSLKATVLDSNLNIV 34 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~~G~~v 34 (400)
+.+|||+||+++|++..+.+|+..
T Consensus 1 m~igiD~G~sntK~~~~~~~g~~~ 24 (320)
T 2zgy_A 1 MLVFIDDGSTNIKLQWQESDGTIK 24 (320)
T ss_dssp CEEEEEECSSEEEEEEECSSSCEE
T ss_pred CeEEEecCCccceEEEecCCCEEE
Confidence 478999999999999877888754
No 83
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=71.47 E-value=1.9 Score=41.89 Aligned_cols=23 Identities=17% Similarity=0.096 Sum_probs=18.5
Q ss_pred CceEEEEEecCcceEEEEEcCCCC
Q 015802 9 DSLFLGFDSSTQSLKATVLDSNLN 32 (400)
Q Consensus 9 ~~~~lgIDiGttsiKa~l~d~~G~ 32 (400)
...++|||+|||++++++++ +|+
T Consensus 22 ~~~viGID~GTt~s~va~~~-~g~ 44 (404)
T 3i33_A 22 SMPAIGIDLGTTYSCVGVFQ-HGK 44 (404)
T ss_dssp -CCCEEEEECSSEEEEEEEE-TTE
T ss_pred cCCEEEEEcCCccEEEEEEE-CCe
Confidence 34689999999999999886 443
No 84
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=69.45 E-value=10 Score=38.78 Aligned_cols=34 Identities=18% Similarity=0.188 Sum_probs=26.0
Q ss_pred CceEEEEEecCcceEEEEEcC-CC--CEEEEEEeecc
Q 015802 9 DSLFLGFDSSTQSLKATVLDS-NL--NIVASEQLQFD 42 (400)
Q Consensus 9 ~~~~lgIDiGttsiKa~l~d~-~G--~~v~~~~~~~~ 42 (400)
++|++|||||+|++.+++-+. +| +++.....++.
T Consensus 1 m~~i~GiDIGnsttev~l~~~~~g~i~~l~~g~~~tt 37 (607)
T 1nbw_A 1 MPLIAGIDIGNATTEVALASDYPQARAFVASGIVATT 37 (607)
T ss_dssp -CEEEEEEECSSEEEEEEEECBTTBCCCCEEEEEECC
T ss_pred CcEEEEEEecCceEEEEEEEEcCCeEEEEEeecccCC
Confidence 368999999999999998664 35 55777777653
No 85
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=69.17 E-value=1.1 Score=40.16 Aligned_cols=52 Identities=15% Similarity=0.051 Sum_probs=31.1
Q ss_pred HHHHHHcCCchhhhcCCcccCCccccc------cCHHHHHHcCCCCCCeEEecCCchHHhhhc
Q 015802 233 KIVLEATAPSLEEKLGKLAPAHAVAGC------IAPYFVERFHFNKNCLVVQWSGDNPNSLAG 289 (400)
Q Consensus 233 ~~~l~~~g~~~~~~LP~l~~~~~~~G~------l~~~~a~~lGL~~g~pV~~g~~D~~aa~~g 289 (400)
...++.+|+ .+.|-.++.+. .+|. +=..+++++|+++.-.|+.| |....+.|
T Consensus 145 ~~~L~~~gl--~~~Fd~i~~~~-~~~~~KP~p~~~~~a~~~lg~~p~e~l~VG--Ds~~Di~a 202 (250)
T 4gib_A 145 INVLNHLGI--SDKFDFIADAG-KCKNNKPHPEIFLMSAKGLNVNPQNCIGIE--DASAGIDA 202 (250)
T ss_dssp HHHHHHHTC--GGGCSEECCGG-GCCSCTTSSHHHHHHHHHHTCCGGGEEEEE--SSHHHHHH
T ss_pred hhHhhhccc--ccccceeeccc-ccCCCCCcHHHHHHHHHHhCCChHHeEEEC--CCHHHHHH
Confidence 357888887 45665555433 3332 23357889999776667665 55544443
No 86
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=68.27 E-value=5 Score=40.09 Aligned_cols=22 Identities=9% Similarity=-0.055 Sum_probs=19.3
Q ss_pred CCceEEEEEecCcceEEEEEcC
Q 015802 8 KDSLFLGFDSSTQSLKATVLDS 29 (400)
Q Consensus 8 ~~~~~lgIDiGttsiKa~l~d~ 29 (400)
+.+|.+.||+|++++|..|++-
T Consensus 32 ~~~y~~vID~GSns~Rl~Vy~~ 53 (456)
T 3cj1_A 32 ALKYGIVLDAGSSHTSMFVYKW 53 (456)
T ss_dssp CEEEEEEEEECSSCEEEEEEEE
T ss_pred CceEEEEEEcCCCCeEEEEEEE
Confidence 3468999999999999999984
No 87
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=68.10 E-value=1.9 Score=41.50 Aligned_cols=21 Identities=19% Similarity=0.346 Sum_probs=17.6
Q ss_pred eEEEEEecCcceEEEEEcCCCC
Q 015802 11 LFLGFDSSTQSLKATVLDSNLN 32 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~~G~ 32 (400)
.++|||+|||++++++++ +|+
T Consensus 3 ~~vGIDlGTt~s~va~~~-~g~ 23 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMD-GTT 23 (383)
T ss_dssp CCCEEECCSSEEEEEEEE-TTE
T ss_pred cEEEEEcCCCCEEEEEEE-CCe
Confidence 478999999999999986 453
No 88
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=67.92 E-value=4.3 Score=39.09 Aligned_cols=21 Identities=10% Similarity=0.121 Sum_probs=18.6
Q ss_pred CceEEEEEecCcceEEEEEcC
Q 015802 9 DSLFLGFDSSTQSLKATVLDS 29 (400)
Q Consensus 9 ~~~~lgIDiGttsiKa~l~d~ 29 (400)
..+++.||+||+++|..|++-
T Consensus 2 ~~~~avID~GSns~Rl~I~~~ 22 (353)
T 3aap_A 2 HSCIAVIDAGSTGSRLHIYSY 22 (353)
T ss_dssp CEEEEEEEECSSCEEEEEEEE
T ss_pred CCEEEEEEcCCCCeEEEEEEE
Confidence 357899999999999999984
No 89
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=63.32 E-value=5.6 Score=33.34 Aligned_cols=25 Identities=24% Similarity=0.231 Sum_probs=22.3
Q ss_pred eEEEEEecCcceEEEEEcCCCCEEE
Q 015802 11 LFLGFDSSTQSLKATVLDSNLNIVA 35 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~~G~~v~ 35 (400)
.+||||.|+..+..++.|..|.+..
T Consensus 4 riLGiDpG~~riGvAv~d~~g~~a~ 28 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDEMGWTAQ 28 (150)
T ss_dssp EEEEEEECSSEEEEEEECTTSSSEE
T ss_pred EEEEEEccCCEEEEEEEECCCCEEe
Confidence 4899999999999999999887754
No 90
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=60.97 E-value=4.1 Score=42.15 Aligned_cols=19 Identities=21% Similarity=0.396 Sum_probs=16.8
Q ss_pred ceEEEEEecCcceEEEEEc
Q 015802 10 SLFLGFDSSTQSLKATVLD 28 (400)
Q Consensus 10 ~~~lgIDiGttsiKa~l~d 28 (400)
..++|||+|||+.++++++
T Consensus 2 ~~viGIDlGTT~S~Va~~~ 20 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIMD 20 (605)
T ss_dssp CCEEEEECCSSEEEEEEEE
T ss_pred CcEEEEEcCCCcEEEEEEE
Confidence 3589999999999999885
No 91
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=60.21 E-value=11 Score=40.27 Aligned_cols=31 Identities=19% Similarity=0.380 Sum_probs=27.2
Q ss_pred CceEEEEEec-CcceEEEEEcCCCCEEEEEEe
Q 015802 9 DSLFLGFDSS-TQSLKATVLDSNLNIVASEQL 39 (400)
Q Consensus 9 ~~~~lgIDiG-ttsiKa~l~d~~G~~v~~~~~ 39 (400)
.+.+||+|-| -|.+|++++|.+|+++.....
T Consensus 328 ~~~vlg~dpg~r~g~k~a~vd~~G~~l~~~~i 359 (785)
T 3bzc_A 328 PRATLGLDPGLRTGVKVAVVDATGKLLDTATV 359 (785)
T ss_dssp SCCEEEEECCSSSCEEEEEECTTSCEEEEEEE
T ss_pred CCeEEEECCCCcCceEEEEECCCCCEEEEEEE
Confidence 3469999999 689999999999999987764
No 92
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=55.80 E-value=23 Score=38.91 Aligned_cols=31 Identities=6% Similarity=0.157 Sum_probs=26.7
Q ss_pred CceEEEEEecC-----cceEEEEEcCCCCEEEEEEe
Q 015802 9 DSLFLGFDSST-----QSLKATVLDSNLNIVASEQL 39 (400)
Q Consensus 9 ~~~~lgIDiGt-----tsiKa~l~d~~G~~v~~~~~ 39 (400)
.+-+||||-|- |.+|++++|.+|+++.....
T Consensus 518 ~~~VlaldpG~~~~~~~g~k~a~vd~~G~~l~~~~i 553 (1030)
T 3psf_A 518 IPKILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKI 553 (1030)
T ss_dssp CCCEEEEECTTCCTTTSCEEEEEECTTSCEEEEEEE
T ss_pred CCeEEEecCCCCCCCCCCeEEEEECCCCCEEEEEEE
Confidence 45799999984 48999999999999998766
No 93
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=55.78 E-value=5.5 Score=39.71 Aligned_cols=22 Identities=5% Similarity=-0.017 Sum_probs=19.3
Q ss_pred CCceEEEEEecCcceEEEEEcC
Q 015802 8 KDSLFLGFDSSTQSLKATVLDS 29 (400)
Q Consensus 8 ~~~~~lgIDiGttsiKa~l~d~ 29 (400)
+.+|.+.||+|+|++|..||.-
T Consensus 32 ~~~y~iviDaGSsgtRl~VY~~ 53 (452)
T 3zx3_A 32 NVKYGIVLDAGSSHTNLYIYKW 53 (452)
T ss_dssp CEEEEEEEEECSSCEEEEEEEE
T ss_pred CceEEEEEEcCCCCcEEEEEEE
Confidence 4468899999999999999984
No 94
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=55.32 E-value=29 Score=30.78 Aligned_cols=63 Identities=8% Similarity=0.051 Sum_probs=41.1
Q ss_pred ceEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhcCCCC
Q 015802 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLS 89 (400)
Q Consensus 10 ~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 89 (400)
.++|+||--|..+-+++++ +++++ +...... . +|.+.+...+.+++++.- +..+
T Consensus 12 ~~iLaidTS~~~~sval~~-~~~~l-~~~~~~~------------r----------~Hse~L~p~i~~~L~~a~--~~~~ 65 (218)
T 2a6a_A 12 HMNVLALDTSQRIRIGLRK-GEDLF-EISYTGE------------K----------KHAEILPVVVKKLLDELD--LKVK 65 (218)
T ss_dssp -CEEEEEECSSSEEEEEEE-TTEEE-EEEEESC------------G----------GGGGHHHHHHHHHHHHHT--CCGG
T ss_pred ceEEEEEcCCcCeEEEEEE-CCEEE-EEEecch------------H----------HHHHHHHHHHHHHHHHcC--CCHH
Confidence 3799999999999999998 56666 3221111 1 122256666666665542 4567
Q ss_pred CEeEEEeec
Q 015802 90 KVTAVSGSG 98 (400)
Q Consensus 90 ~I~aIgis~ 98 (400)
+|.+|+++.
T Consensus 66 dld~Iav~~ 74 (218)
T 2a6a_A 66 DLDVVGVGI 74 (218)
T ss_dssp GCSEEEEEC
T ss_pred HCCEEEEEc
Confidence 899999986
No 95
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=53.49 E-value=7.7 Score=39.05 Aligned_cols=19 Identities=26% Similarity=0.387 Sum_probs=16.7
Q ss_pred eEEEEEecCcceEEEEEcC
Q 015802 11 LFLGFDSSTQSLKATVLDS 29 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~ 29 (400)
.++|||+|||++++++.+.
T Consensus 3 ~~iGIDlGTt~s~va~~~~ 21 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEG 21 (509)
T ss_dssp CEEEEEECSSEEEEEEEET
T ss_pred CEEEEEcCCceEEEEEEEC
Confidence 4899999999999998863
No 96
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=51.94 E-value=6.3 Score=40.72 Aligned_cols=20 Identities=20% Similarity=0.355 Sum_probs=16.6
Q ss_pred eEEEEEecCcceEEEEEcCCC
Q 015802 11 LFLGFDSSTQSLKATVLDSNL 31 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~~G 31 (400)
.++|||+|||++++++++ +|
T Consensus 3 ~viGIDlGTt~s~va~~~-~g 22 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMD-GT 22 (605)
T ss_dssp -CEEEECCSSEEEEEEEE-TT
T ss_pred CEEEEEcCCcCEEEEEEE-CC
Confidence 479999999999999886 35
No 97
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=50.88 E-value=7.7 Score=36.52 Aligned_cols=17 Identities=18% Similarity=0.083 Sum_probs=14.7
Q ss_pred eEEEEEecCcceEEEEE
Q 015802 11 LFLGFDSSTQSLKATVL 27 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~ 27 (400)
..+|||+|||++|+++.
T Consensus 4 ~~igIDlGT~~s~v~~~ 20 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLR 20 (344)
T ss_dssp CEEEEEECSSEEEEEET
T ss_pred ceEEEEcCcCcEEEEEC
Confidence 47999999999999753
No 98
>4h0p_A Acetate kinase; askha (acetate and sugar kinas actin) superfamily, ribonuclease H-like fold, transferase; 1.89A {Cryptococcus neoformans}
Probab=50.85 E-value=15 Score=36.14 Aligned_cols=32 Identities=13% Similarity=0.343 Sum_probs=26.5
Q ss_pred CceEEEEEecCcceEEEEEcC-CCCEEEEEEee
Q 015802 9 DSLFLGFDSSTQSLKATVLDS-NLNIVASEQLQ 40 (400)
Q Consensus 9 ~~~~lgIDiGttsiKa~l~d~-~G~~v~~~~~~ 40 (400)
++++|.|..|+||+|..|||. +.+++++..++
T Consensus 5 ~~~ILviNaGSSSlKf~L~~~~~~~~l~~G~ve 37 (438)
T 4h0p_A 5 AEYLLAINCGSSSIKGKLFAIPSFELLANLAVT 37 (438)
T ss_dssp CEEEEEEEECSSCEEEEEEEETTTEEEEEEEEE
T ss_pred CCEEEEEECCcccceeEEEEcCCCCeeeEEEEe
Confidence 468999999999999999995 56777776654
No 99
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=50.17 E-value=41 Score=34.36 Aligned_cols=31 Identities=10% Similarity=0.106 Sum_probs=21.1
Q ss_pred CceEEEEEecCcceEEEEEc--CCCCEEEEEEe
Q 015802 9 DSLFLGFDSSTQSLKATVLD--SNLNIVASEQL 39 (400)
Q Consensus 9 ~~~~lgIDiGttsiKa~l~d--~~G~~v~~~~~ 39 (400)
++|+.|||||.+++-+++-+ .+|++-..++-
T Consensus 1 m~~i~gvdign~tte~~la~~~~~~~~~f~~s~ 33 (610)
T 2d0o_A 1 MRYIAGIDIGNSSTEVALATLDEAGALTITHSA 33 (610)
T ss_dssp CEEEEEEEECSSEEEEEEEEECTTCCEEEEEEE
T ss_pred CcEEEEEecCCcchheeeeeecCCCceEEeecc
Confidence 36899999998888777644 34655444433
No 100
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=47.03 E-value=15 Score=35.47 Aligned_cols=85 Identities=18% Similarity=0.233 Sum_probs=49.0
Q ss_pred ceEEEEEecCc--ceEEEEEcCCC--CEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChh-------HHHHHHHHH
Q 015802 10 SLFLGFDSSTQ--SLKATVLDSNL--NIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTL-------MWIEALDLM 78 (400)
Q Consensus 10 ~~~lgIDiGtt--siKa~l~d~~G--~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~-------~~~~~~~~~ 78 (400)
.++||+=.||| .|-+++++.+| +++....++|+.....- -..-..+. ..+++ .+-+.+.++
T Consensus 2 ~~~IGlMSGTSlDGID~alv~~~~~~~l~~~~~~py~~~lr~~---l~~~~~~~-----~~~~~~~~~l~~~lg~~~a~a 73 (371)
T 3qbx_A 2 PRYLGLMSGTSLDGMDIVLIEQGDRTTLLASHYLPMPAGLRED---ILALCVPG-----PDEIARAAEVEQRWVALAAQG 73 (371)
T ss_dssp CEEEEEECCSSCSEEEEEEEEESSSEEEEEEEEEECCHHHHHH---HHHTTSCC-----BTHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEecccChhhhhEEEEEecCCceecceeeecCCHHHHHH---HHHHhccC-----CCCHHHHHHHHHHHHHHHHHH
Confidence 68999999998 68999998766 56666777776211000 00000100 00111 122233455
Q ss_pred HHHHhhc--CCCCCEeEEEeecccceee
Q 015802 79 LQKLSKS--LDLSKVTAVSGSGQQHGSV 104 (400)
Q Consensus 79 ~~~l~~~--~~~~~I~aIgis~~~~~~v 104 (400)
++++++. +++++|.+||..+| |+.
T Consensus 74 v~~~l~~~~~~~~~Id~IGsHGQ--Tv~ 99 (371)
T 3qbx_A 74 VRELLLQQQMSPDEVRAIGSHGQ--TIR 99 (371)
T ss_dssp HHHHHHHTTCCGGGCCEEEECCE--EEE
T ss_pred HHHHHHHcCCCcccccEEEeCCc--cCc
Confidence 5555543 66788999999988 554
No 101
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=46.74 E-value=24 Score=34.15 Aligned_cols=30 Identities=10% Similarity=0.189 Sum_probs=25.1
Q ss_pred eEEEEEecCcceEEEEEcC-CCCEEEEEEee
Q 015802 11 LFLGFDSSTQSLKATVLDS-NLNIVASEQLQ 40 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~-~G~~v~~~~~~ 40 (400)
.+|.|..|+||+|..|||. +++++++..++
T Consensus 3 ~iLviN~GSSSlK~~l~~~~~~~~l~~G~~e 33 (384)
T 3khy_A 3 EILVLNCGSSSVKFALINPHTSQSLVTGLAE 33 (384)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEE
T ss_pred EEEEEECCchhheEEEEecCCCceEEEEEEE
Confidence 6899999999999999996 56677776654
No 102
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=46.58 E-value=58 Score=28.68 Aligned_cols=62 Identities=19% Similarity=0.293 Sum_probs=39.5
Q ss_pred eEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhcCCCCC
Q 015802 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 90 (400)
.+|+||--|..+-+++++ +|+++..... .. .+|.+.+...+.+++++.- +..++
T Consensus 3 ~iLaIdTS~~~~svAl~~-~~~~~~~~~~-----------------~~------~~Hs~~L~p~i~~~L~~a~--~~~~d 56 (213)
T 3r6m_A 3 KILAIDTATENCSVALLV-NDQVISRSEV-----------------AP------RDHTKKVLPMVDEVLKEAG--LTLQD 56 (213)
T ss_dssp CEEEEECSSSEEEEEEES-SSCEEEEEEE-----------------CC------SCCHHHHHHHHHHHHHTTT--CCTTT
T ss_pred EEEEEEccCcceEEEEEE-CCEEEEEEEe-----------------ch------HHHHHHHHHHHHHHHHHcC--CCHHH
Confidence 589999999999999987 4777755311 00 1122245544444444321 56789
Q ss_pred EeEEEeec
Q 015802 91 VTAVSGSG 98 (400)
Q Consensus 91 I~aIgis~ 98 (400)
|.+|+++.
T Consensus 57 ld~Iav~~ 64 (213)
T 3r6m_A 57 LDALAFGR 64 (213)
T ss_dssp CSEEEEEE
T ss_pred ccEEEEec
Confidence 99999986
No 103
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=46.39 E-value=56 Score=27.66 Aligned_cols=22 Identities=18% Similarity=0.226 Sum_probs=20.1
Q ss_pred eEEEEEecCcceEEEEEcCCCC
Q 015802 11 LFLGFDSSTQSLKATVLDSNLN 32 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~~G~ 32 (400)
.+||||-|++++=-+++|.+|+
T Consensus 2 rILGIDPGl~~tG~gvi~~~g~ 23 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVAVEGK 23 (166)
T ss_dssp EEEEEECCSSEEEEEEEEECSS
T ss_pred EEEEEccccCceEEEEEEecCC
Confidence 5899999999999999998875
No 104
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=45.22 E-value=43 Score=37.54 Aligned_cols=31 Identities=6% Similarity=0.157 Sum_probs=26.8
Q ss_pred CceEEEEEecC-----cceEEEEEcCCCCEEEEEEe
Q 015802 9 DSLFLGFDSST-----QSLKATVLDSNLNIVASEQL 39 (400)
Q Consensus 9 ~~~~lgIDiGt-----tsiKa~l~d~~G~~v~~~~~ 39 (400)
.+-+||||-|- |.+|++++|.+|+++.....
T Consensus 515 ~~~VlaldpG~r~~g~~g~k~a~vD~~G~vl~~~~i 550 (1219)
T 3psi_A 515 IPKILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKI 550 (1219)
T ss_dssp CCCEEEEECTTCCTTTTCEEEEEECTTSCEEEEEEE
T ss_pred CCeEEEecCCCCCCCCCceEEEEECCCCCEEEEEEE
Confidence 45799999985 38999999999999998766
No 105
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=44.43 E-value=28 Score=34.11 Aligned_cols=32 Identities=19% Similarity=0.264 Sum_probs=26.7
Q ss_pred ceEEEEEecCcceEEEEEcC-CCCEEEEEEeec
Q 015802 10 SLFLGFDSSTQSLKATVLDS-NLNIVASEQLQF 41 (400)
Q Consensus 10 ~~~lgIDiGttsiKa~l~d~-~G~~v~~~~~~~ 41 (400)
+.+|.|..|+||+|..|||. +.+++.+...+.
T Consensus 18 ~~ILviN~GSSS~K~~lf~~~~~~~l~~g~ie~ 50 (415)
T 2e1z_A 18 PVVLVINCGSSSIKFSVLDVATCDVLMAGIADG 50 (415)
T ss_dssp CEEEEEEECSSEEEEEEEETTTCCEEEEEEEES
T ss_pred CeEEEEECCchhheEEEEECCCCCEEEEEEEEe
Confidence 46999999999999999996 467888777664
No 106
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=44.02 E-value=9.6 Score=39.94 Aligned_cols=18 Identities=17% Similarity=0.193 Sum_probs=16.1
Q ss_pred EEEEEecCcceEEEEEcC
Q 015802 12 FLGFDSSTQSLKATVLDS 29 (400)
Q Consensus 12 ~lgIDiGttsiKa~l~d~ 29 (400)
++|||+|||+.++++++.
T Consensus 4 ~iGIDlGTtns~va~~~~ 21 (675)
T 3d2f_A 4 PFGLDLGNNNSVLAVARN 21 (675)
T ss_dssp CEEEECCSSEEEEEEEET
T ss_pred EEEEEcCCCcEEEEEEEC
Confidence 799999999999998764
No 107
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=42.06 E-value=13 Score=34.95 Aligned_cols=21 Identities=10% Similarity=0.053 Sum_probs=18.0
Q ss_pred CCCceEEEEEecCcceEEEEE
Q 015802 7 PKDSLFLGFDSSTQSLKATVL 27 (400)
Q Consensus 7 ~~~~~~lgIDiGttsiKa~l~ 27 (400)
|++++++|||+|-.++|++..
T Consensus 4 ~~~~~iigiD~G~~~~K~~~~ 24 (329)
T 4apw_A 4 ITNEYVMTLDAGKYETKLIGK 24 (329)
T ss_dssp -CCEEEEEEEECSSEEEEEEH
T ss_pred ccCceEEEEecCCceEEEEec
Confidence 667899999999999999963
No 108
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=40.96 E-value=15 Score=34.90 Aligned_cols=22 Identities=14% Similarity=0.160 Sum_probs=17.4
Q ss_pred eEEEEEecCcceEEEEEcCCCCEE
Q 015802 11 LFLGFDSSTQSLKATVLDSNLNIV 34 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~~G~~v 34 (400)
+.+|||+||+++|+.. .+|.++
T Consensus 22 ~~igiDlG~~~tkv~~--~~g~~~ 43 (346)
T 2fsj_A 22 VVVGLDVGYGDTKVIG--VDGKRI 43 (346)
T ss_dssp EEEEEEECSSEEEEEC--GGGCEE
T ss_pred EEEEEecCCcceeEEe--cCCCEE
Confidence 6799999999999873 446544
No 109
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=40.89 E-value=57 Score=27.35 Aligned_cols=23 Identities=17% Similarity=0.221 Sum_probs=20.0
Q ss_pred eEEEEEecCcceEEEEEcCCCCE
Q 015802 11 LFLGFDSSTQSLKATVLDSNLNI 33 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~~G~~ 33 (400)
.+||||-|++++=-++++.+|+.
T Consensus 2 ~ILGIDPGl~~tG~gvi~~~g~~ 24 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQVGRQ 24 (158)
T ss_dssp EEEEEECCSSEEEEEEEEEETTE
T ss_pred EEEEEccCCCCeeEEEEEecCCe
Confidence 48999999999999999987763
No 110
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=40.67 E-value=50 Score=29.38 Aligned_cols=62 Identities=18% Similarity=0.236 Sum_probs=38.7
Q ss_pred eEEEEEecCcceEEEEEcCCCCEEEEEEeeccCCCCCCCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHhhcCCCCC
Q 015802 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~~G~~v~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 90 (400)
.+|+||--+..+-+++++ +|+++.. ... ... .|.+.+...+.+++++.- +..++
T Consensus 2 ~iL~idTs~~~~sval~~-~~~~~~~--~~~---------------~~~------~h~~~l~~~i~~~L~~a~--~~~~d 55 (231)
T 2gel_A 2 RILAIDTATEACSVALWN-NGTINAH--FEL---------------CPR------EHTQRILPMVQEILAASG--ASLNE 55 (231)
T ss_dssp EEEEEECSSSEEEEEEEE-TTEEEEE--EEE---------------CCS------CCHHHHHHHHHHHHHHTT--CCGGG
T ss_pred eEEEEECCCcCeEEEEEE-CCEEEEE--Ehh---------------hhH------HHHHHHHHHHHHHHHHcC--CCHHH
Confidence 689999998888889987 5666531 111 111 122245555555555432 56778
Q ss_pred EeEEEeec
Q 015802 91 VTAVSGSG 98 (400)
Q Consensus 91 I~aIgis~ 98 (400)
|.+|+++.
T Consensus 56 id~Iav~~ 63 (231)
T 2gel_A 56 IDALAFGR 63 (231)
T ss_dssp CSEEEEEC
T ss_pred CCEEEEEc
Confidence 99999986
No 111
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=39.20 E-value=31 Score=33.71 Aligned_cols=31 Identities=23% Similarity=0.207 Sum_probs=25.3
Q ss_pred eEEEEEecCcceEEEEEcC-CCCEEEEEEeec
Q 015802 11 LFLGFDSSTQSLKATVLDS-NLNIVASEQLQF 41 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~-~G~~v~~~~~~~ 41 (400)
.+|.|..|+||+|..|||. +.+++.+...+.
T Consensus 2 ~ILviN~GSSS~K~~lf~~~~~~~l~~g~ie~ 33 (408)
T 1g99_A 2 KVLVINAGSSSLKYQLIDMTNESALAVGLCER 33 (408)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEES
T ss_pred eEEEEECCchhheeEEEEcCCCcEEEEEEEEe
Confidence 4899999999999999995 456777776654
No 112
>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}
Probab=37.40 E-value=35 Score=33.22 Aligned_cols=31 Identities=35% Similarity=0.259 Sum_probs=24.8
Q ss_pred CceEEEEEecCcceEEEEEcCCCCEEEEEEee
Q 015802 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQ 40 (400)
Q Consensus 9 ~~~~lgIDiGttsiKa~l~d~~G~~v~~~~~~ 40 (400)
+..+|.|..|+||+|..|||. .+++++..++
T Consensus 13 ~~~iLviN~GSSSlKf~l~~~-~~~l~~G~ve 43 (404)
T 4h0o_A 13 MSNVLIFNVGSSSLTYKVFCS-DNIVCSGKSN 43 (404)
T ss_dssp -CEEEEEEECSSCEEEEEEET-TEEEEEEEEC
T ss_pred cceEEEEECCchhheeeEeec-chhhhcceee
Confidence 456899999999999999998 6677666543
No 113
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=36.95 E-value=32 Score=33.61 Aligned_cols=31 Identities=13% Similarity=0.179 Sum_probs=25.3
Q ss_pred eEEEEEecCcceEEEEEcC-CCCEEEEEEeec
Q 015802 11 LFLGFDSSTQSLKATVLDS-NLNIVASEQLQF 41 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~-~G~~v~~~~~~~ 41 (400)
.+|.|..|+||+|..|||. +.+++.+...+.
T Consensus 2 ~ILviN~GSSS~K~~l~~~~~~~~l~~g~ie~ 33 (403)
T 2iir_A 2 RVLVINSGSSSIKYQLIEMEGEKVLCKGIAER 33 (403)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEC
T ss_pred eEEEEeCCchhheeEEEEcCCCcEEEEEEEEe
Confidence 4899999999999999995 456777776653
No 114
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=36.78 E-value=26 Score=26.94 Aligned_cols=22 Identities=9% Similarity=0.137 Sum_probs=19.4
Q ss_pred EEEEEecCcceEEEEEcCCCCE
Q 015802 12 FLGFDSSTQSLKATVLDSNLNI 33 (400)
Q Consensus 12 ~lgIDiGttsiKa~l~d~~G~~ 33 (400)
+||||+|+..|=.++-|..|.+
T Consensus 3 iLglD~G~kriGvAvsd~~~~~ 24 (98)
T 1iv0_A 3 VGALDVGEARIGLAVGEEGVPL 24 (98)
T ss_dssp EEEEEESSSEEEEEEECSCCSS
T ss_pred EEEEEeCCCEEEEEEEeCCCCe
Confidence 7999999999999999987644
No 115
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=29.02 E-value=33 Score=32.68 Aligned_cols=18 Identities=11% Similarity=0.165 Sum_probs=15.9
Q ss_pred CCCceEEEEEecCcceEE
Q 015802 7 PKDSLFLGFDSSTQSLKA 24 (400)
Q Consensus 7 ~~~~~~lgIDiGttsiKa 24 (400)
|++.+++|||+|-+.+|+
T Consensus 1 m~~~~iigiD~G~~~~K~ 18 (355)
T 3js6_A 1 MSNVYVMALDFGNGFVKG 18 (355)
T ss_dssp -CCEEEEEEEECSSEEEE
T ss_pred CCccEEEEEEcCCCcEEE
Confidence 788899999999999995
No 116
>1dw0_A Cytochrome C; asparagine ligation, oxygen binding, disulfide bridge, oxygen storage/transport complex; HET: HEM; 1.82A {Rhodobacter sphaeroides} SCOP: a.3.1.1 PDB: 1dw1_A* 1dw2_A* 1dw3_A*
Probab=28.32 E-value=16 Score=29.02 Aligned_cols=29 Identities=14% Similarity=-0.019 Sum_probs=22.3
Q ss_pred HHHhhcCchhHHhcccccchhhHHHHHHh
Q 015802 179 RKLFQTQPGVYDDTERISVVSSFMASLLI 207 (400)
Q Consensus 179 ~Wl~~~~pe~~~~~~~~~~~~dyl~~~LT 207 (400)
.|+++|..+++.|.-.-..=.|||.|.+|
T Consensus 83 kwf~rnc~~v~gr~cta~EK~d~l~~l~~ 111 (112)
T 1dw0_A 83 KWLGRNCNSVIGRDCTPGEKADLLAWLAA 111 (112)
T ss_dssp HHHHHHHHHHHSSCCCHHHHHHHHHHHHT
T ss_pred HHHHhhhhHHHcccCCHHHHHHHHHHHHh
Confidence 47888888888776555555799999886
No 117
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=26.25 E-value=71 Score=26.44 Aligned_cols=31 Identities=6% Similarity=0.113 Sum_probs=27.1
Q ss_pred hHHHHHHHHHHHHHhhc--CCCCCEeEEEeecc
Q 015802 69 LMWIEALDLMLQKLSKS--LDLSKVTAVSGSGQ 99 (400)
Q Consensus 69 ~~~~~~~~~~~~~l~~~--~~~~~I~aIgis~~ 99 (400)
+++++++.++++++.+. +++++|.+|-||..
T Consensus 47 e~I~~At~ELl~eii~~N~l~~eDIvSv~FTvT 79 (148)
T 1xho_A 47 DEIVAETQKLLKEMAEKNGLEEDDIISIIFTVT 79 (148)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeC
Confidence 38999999999998874 88899999999975
No 118
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=26.18 E-value=65 Score=26.32 Aligned_cols=24 Identities=21% Similarity=0.243 Sum_probs=20.6
Q ss_pred eEEEEEecCcceEEEEEcCCCCEE
Q 015802 11 LFLGFDSSTQSLKATVLDSNLNIV 34 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~~G~~v 34 (400)
.+||||+|+..|=.++-|..+.+.
T Consensus 4 ~iLglD~G~kriGvAvsd~~~~~A 27 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRITGTA 27 (138)
T ss_dssp EEEEEECCSSEEEEEEEETTTTEE
T ss_pred eEEEEEeCCCEEEEEEEcCCCCEE
Confidence 489999999999999999976643
No 119
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=24.46 E-value=80 Score=25.49 Aligned_cols=31 Identities=13% Similarity=0.086 Sum_probs=27.2
Q ss_pred hHHHHHHHHHHHHHhhc--CCCCCEeEEEeecc
Q 015802 69 LMWIEALDLMLQKLSKS--LDLSKVTAVSGSGQ 99 (400)
Q Consensus 69 ~~~~~~~~~~~~~l~~~--~~~~~I~aIgis~~ 99 (400)
+++++++.++++++.+. +++++|.+|-||..
T Consensus 18 e~I~~at~eLl~~i~~~N~l~~~dIvSv~FT~T 50 (127)
T 1dbf_A 18 EEILQKTKQLLEKIIEENHTKPEDVVQMLLSAT 50 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeC
Confidence 38999999999998874 88899999999975
No 120
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=24.14 E-value=31 Score=33.29 Aligned_cols=21 Identities=14% Similarity=-0.132 Sum_probs=17.1
Q ss_pred eEEEEEecCcceEEEEEcCCC
Q 015802 11 LFLGFDSSTQSLKATVLDSNL 31 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~~G 31 (400)
-.++||+||+++|++....++
T Consensus 6 ~~ivID~Gs~~~k~G~~~~~~ 26 (418)
T 1k8k_A 6 PACVVDCGTGYTKLGYAGNTE 26 (418)
T ss_dssp CCEEEEECSSEEEEEETTCSS
T ss_pred CeEEEECCCCeEEEeeCCCCC
Confidence 468999999999998765544
No 121
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=22.99 E-value=1e+02 Score=24.63 Aligned_cols=31 Identities=16% Similarity=0.067 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHHHHhhc--CCC-CCEeEEEeecc
Q 015802 69 LMWIEALDLMLQKLSKS--LDL-SKVTAVSGSGQ 99 (400)
Q Consensus 69 ~~~~~~~~~~~~~l~~~--~~~-~~I~aIgis~~ 99 (400)
+++++++.++++++.+. +++ ++|.+|-||..
T Consensus 17 e~I~~at~eLl~~i~~~N~l~~~~divSv~FT~T 50 (122)
T 1ufy_A 17 EAIHQATRELLLKMLEANGIQSYEELAAVIFTVT 50 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCGGGEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhcCCCChHhEEEEEEEeC
Confidence 48999999999998874 888 99999999975
No 122
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=22.41 E-value=36 Score=32.42 Aligned_cols=21 Identities=19% Similarity=0.121 Sum_probs=17.3
Q ss_pred eEEEEEecCcceEEEEEcCCC
Q 015802 11 LFLGFDSSTQSLKATVLDSNL 31 (400)
Q Consensus 11 ~~lgIDiGttsiKa~l~d~~G 31 (400)
-.++||+||+++|+.....+.
T Consensus 6 ~~ivID~Gs~~~k~G~~~~~~ 26 (375)
T 2fxu_A 6 TALVCDNGSGLVKAGFAGDDA 26 (375)
T ss_dssp CCEEEEECSSEEEEEETTCSS
T ss_pred ceEEEECCCCeEEEEECCCCC
Confidence 368999999999998776554
Done!